mRNA_H-elongata_contig8578.16162.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig8578.16162.1 vs. uniprot
Match: D7G8J4_ECTSI (Calcineurin-like phosphoesterase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8J4_ECTSI) HSP 1 Score: 428 bits (1101), Expect = 2.850e-142 Identity = 210/316 (66.46%), Postives = 250/316 (79.11%), Query Frame = 2
Query: 2 DAFRSCLRMANVVDADDAWAGGETVVVQLGDIFDRGNDDLPIEEWVYRLAMDAGRTNGAVYSILGNHEMMNAMGDHSMATRKAFIPFEDLQPELDELTGDDLSDLDDIPKWARCRLLAMSPGGPVARLLSAHAVCMKVGENLFAHGGLLPEHL----------------LSATEDVDQAMEDLNRAACSWLLGEAPIPEAIWGESSPLWIRLYSSPDSRDVDDTARTQLEEVLRLTGTKRLFVGHTPQRMGINSGADGQVWRVDTGMSAMMGGRPEVLEIKGQEISILTESRSIAANKRVARPQTP--KHDEQKRQ 895
DAFRSCL+MA++VDA+D WAGGETVVVQ+GDIFDRG+DDLPI+EWVY+LA +AGR NGA+YS++GNHEM+NAMGDHSMATRKAF+PF L+PELDEL G D S L+ P+WARCRL AM PGGPVARL++AHAV MKVG+NLF H GLLPEH+ ++A E+V ME LN C+W+LG+ IPE IW PLW R+YS+PDSR++D AR QLEEVLRLTGTKR+ VGHTPQR GINS ADGQVWRVDTGM+AM+GGRPE LEI+G+E++ILTE +SI KR AR TP K DE +RQ
Sbjct: 86 DAFRSCLQMADLVDAEDKWAGGETVVVQMGDIFDRGDDDLPIQEWVYKLAQEAGRANGALYSVMGNHEMLNAMGDHSMATRKAFVPFLALRPELDELVGGDWSALEGFPEWARCRLAAMRPGGPVARLMAAHAVSMKVGDNLFVHAGLLPEHIRGTAAGEAGGGDQGDSVAAAEEV---MERLNADTCAWMLGKRSIPEEIWQPEGPLWTRVYSTPDSREIDAAARAQLEEVLRLTGTKRMVVGHTPQRAGINSAADGQVWRVDTGMTAMIGGRPEALEIRGEEMTILTEYKSIPGQKRAARQPTPVSKGDEFRRQ 398
BLAST of mRNA_H-elongata_contig8578.16162.1 vs. uniprot
Match: A0A835Z3D9_9STRA (Metallo-dependent phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3D9_9STRA) HSP 1 Score: 312 bits (800), Expect = 2.300e-98 Identity = 156/285 (54.74%), Postives = 202/285 (70.88%), Query Frame = 2
Query: 14 SCLRMANVVDADDAWAGGETVVVQLGDIFDRGNDDLPIEEWVYRLAMDAGRTNGAVYSILGNHEMMNAMGDHSMATRKAFIPFEDLQPELDELTGD-DLSDLDDIPKWARCRLLAMSPGGPVARLLSAHAVCMKVGENLFAHGGLLPEHLLSATEDVDQAMEDLNRAACSWLLGEAPIPEAIWGESSPLWIRLYSSPDSRDVDDTARTQLEEVLRLTGTKRLFVGHTPQRMGINSGADGQVWRVDTGMSAMMGGRPEVLEIKGQEISILTESRSIAANKRVARPQ 865
S L MA +VD+ WAGGETV+VQ GD+FDRG DL +EE +Y LA +A GAV++ILGNHE +NA GDH+MA R AF PF+DL+PEL+ L GD L +P+W+RCR+ AM PGGPV +L+ H V +KVG++L H G+LP HL ++ +E LN+ WL P+P+ + E+SP+W RLYSSPDS D+ A QL+EVL+ TGTKR+ VGHTPQR+GINS ADG+VWRVDT M A+MGG+PEVLEI G EI++LTE + A +R A P+
Sbjct: 2 SALNMAGLVDSTGHWAGGETVMVQSGDVFDRGEHDLVVEELLYCLAEEAAAAGGAVHTILGNHEALNACGDHTMAARTAFQPFDDLKPELEALLGDRGWGGLMQMPEWSRCRIAAMYPGGPVGAMLANHGVTLKVGDSLIVHAGVLPRHL-----ELPGGLEGLNQRTWEWLTNAGPLPDELLQEASPVWTRLYSSPDSVDLHVRAVQQLDEVLQRTGTKRMIVGHTPQRIGINSAADGKVWRVDTAMCAIMGGKPEVLEICGDEIAVLTEYGRVPAEERRAWPR 281
BLAST of mRNA_H-elongata_contig8578.16162.1 vs. uniprot
Match: A0A835Z833_9STRA (Calcineurin-like phosphoesterase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z833_9STRA) HSP 1 Score: 285 bits (729), Expect = 4.240e-87 Identity = 145/291 (49.83%), Postives = 194/291 (66.67%), Query Frame = 2
Query: 5 AFRSCLRMANVVDADDAWAGGETVVVQLGDIFDRGNDDLPIEEWVYRLAMDAGRTNGAVYSILGNHEMMNAMGDHSMATRKAFIPFEDLQPELDELTGDDLSDLDDIPKWARCRLLAMSPGGPVARLLSAHAVCMKVGENLFAHGGLLPEHLL-----SATEDVDQAMEDLNRAACSWLLGEAPIP-EAIWGESSPLWIRLYSSPDSRDVDDTARTQLEEVLRLTGTKRLFVGHTPQRMGINSGADGQVWRVDTGMSAMMGGRPEVLEI-KGQEISILTESRSIAANKRVA 856
AF+ CL +A ++D + AWAGG TV+VQLGDIFDRG+DDL IEEW++ LA A GAVY +LGNHE+MN MGDHS A++++F PF +L P ++ ++ + L+ +PKWA RL AM GPVA +++ H+V MK+G L H G+L EHL T +E LN A ++LL +P E +WG SP+W R YS PD + + A +L VL TG+ R+ VGHTPQ GINS A G+VWRVDTGM+ +GG+PEVLEI KG EISILT++ ++A +R A
Sbjct: 63 AFQDCLEVAGLIDEEGAWAGGTTVLVQLGDIFDRGDDDLAIEEWLFLLAEQAAEAGGAVYHLLGNHELMNIMGDHSSASKESFAPFVELSPLVETWMNENTALLEKVPKWAWPRLAAMRASGPVAHMMAGHSVAMKIGNTLVVHAGILREHLEPQRCGGVTNGGVACLELLNSVAANYLLNGGGMPQEMLWGRESPVWTRRYSMPDGKALAKDAEEELIAVLEATGSIRMVVGHTPQSAGINSAAQGKVWRVDTGMTKAIGGKPEVLEIRKGGEISILTKAGRVSAEQRSA 353
BLAST of mRNA_H-elongata_contig8578.16162.1 vs. uniprot
Match: D7FZT9_ECTSI (Calcineurin-like phosphoesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZT9_ECTSI) HSP 1 Score: 265 bits (678), Expect = 1.350e-79 Identity = 132/275 (48.00%), Postives = 177/275 (64.36%), Query Frame = 2
Query: 5 AFRSCLRMANVVDADDAWAGGETVVVQLGDIFDRGNDDLPIEEWVYRLAMDAGRTNGAVYSILGNHEMMNAMGDHSMATRKAFIPFEDLQPELDELTGDDLSDLDDIPKWARCRLLAMSPGGPVARLLSAHAVCMKVGENLFAHGGLLPEHL--LSATEDVDQA-MEDLNRAACSWLLGEAPIPEAIWGESSPLWIRLYSSPDSRDVDDTARTQLEEVLRLTGTKRLFVGHTPQRMGINSGADGQVWRVDTGMSAMMGGRPEVLEIKGQEISILT 820
AF L A +VD WA GETV+VQ GD+FDRG+ DL +EEW++ L A + GAVY +LGNHE+MNAMGDHS A+ +F PF+DL +L S LD P W + RL AM+PGGPV+++L++H+V MK+G+ L HGGL P + S A +E LNR WL+G+ +P+ +W SP+W R YSSP ++ + A L++VL TGT R+ VGHTPQ GINS G++WR DTGM+AM+GG+PE LEI +I+T
Sbjct: 21 AFAETLLAAGLVDGTGNWAAGETVLVQAGDVFDRGDADLEVEEWLWTLQEQATESGGAVYHLLGNHEIMNAMGDHSTASPNSFKPFQDLDVDLAPFG----SQLDKFPDWGKPRLAAMAPGGPVSKMLASHSVAMKIGDTLLVHGGLRPVNFDPKSCRGATGMACLESLNRWTHEWLVGQGEMPKELWNRDSPVWTRFYSSPGGVELSEEAEADLQKVLDATGTVRMIVGHTPQEAGINSALGGRLWRTDTGMTAMIGGQPEALEIVDGVATIIT 291
BLAST of mRNA_H-elongata_contig8578.16162.1 vs. uniprot
Match: A0A6H5KL57_9PHAE (Metallophos domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL57_9PHAE) HSP 1 Score: 261 bits (668), Expect = 6.940e-78 Identity = 128/262 (48.85%), Postives = 172/262 (65.65%), Query Frame = 2
Query: 5 AFRSCLRMANVVDADDAWAGGETVVVQLGDIFDRGNDDLPIEEWVYRLAMDAGRTNGAVYSILGNHEMMNAMGDHSMATRKAFIPFEDLQPELDELTGDDLSDLDDIPKWARCRLLAMSPGGPVARLLSAHAVCMKVGENLFAHGGLLPEHL--LSATEDVDQA-MEDLNRAACSWLLGEAPIPEAIWGESSPLWIRLYSSPDSRDVDDTARTQLEEVLRLTGTKRLFVGHTPQRMGINSGADGQVWRVDTGMSAMMGGRPE 781
AF L A +VD WA GETV+VQ GD+FDRG+ DL +EEW++ L A + GAVY +LGNHE+MNAMGDHS A+ K+F PF+DL +L S LD P W + RL AM+PGGPV+++L++H+V MK+G+ L HGGL P + S A +E LNR WL+G+ +P+ +W SP+W R YSSP ++ + A L++VL +TGT R+ VGHTPQ GINS G++WR DTGM+AM+GG+PE
Sbjct: 116 AFAETLLAAGLVDGTGNWAAGETVLVQAGDVFDRGDSDLEVEEWLWTLQEQATESGGAVYHLLGNHEIMNAMGDHSTASPKSFEPFQDLNVDLAPFG----SQLDKFPDWGKPRLAAMAPGGPVSKMLASHSVAMKIGDTLLVHGGLRPVNFDPKSCRGATGMACLESLNRWTHEWLIGQGEMPKELWNRDSPVWTRFYSSPGGVELGEEAGADLQKVLDVTGTVRMIVGHTPQEAGINSALGGRLWRTDTGMTAMIGGQPE 373
BLAST of mRNA_H-elongata_contig8578.16162.1 vs. uniprot
Match: A0A5J4Z723_PORPP (Shewanella-like protein phosphatase 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z723_PORPP) HSP 1 Score: 210 bits (534), Expect = 3.650e-58 Identity = 120/293 (40.96%), Postives = 168/293 (57.34%), Query Frame = 2
Query: 2 DAFRSCLRMANVVDADDAWAGGETVVVQLGDIFDRGNDDLPIEEWVYRLAMDAGRTNGAVYSILGNHEMMNAMGDHSMATRKAFIPFE------DLQPELDELTGDDLSDLDDIPKWARCRLLAMSPGGPVARLLSAHA-VCMKVGENLFAHGGLLPEHLLSATEDVDQAMEDLNRAACSWLLGEAPIPEAIWGESSPLWIRLYSSPDSRDVDDTARTQLEEVLRLTGTKRLFVGHTPQRMGINSGADGQVWRVDTGMSAMMGGRPEVLEIKGQEISILTESRSIAANKRVAR 859
DA R L++ NV+ +D W GG+TV+VQ+GD DRG+ +L + +YRL A G V+ +LGNHE+MN D T+ F F +P+L ++ + + +P+W R R LA PGG A L++ V + VG+NLF HGGL PEH+ TE A+E +N+ +LLG+A P A+ G SP+W+R +S P D + T+ L+LT T+R+ VGHTPQ G+N G+VWRVDTGMS+ GG PE LEI + + ILT A N R+ R
Sbjct: 107 DALRVALKLCNVLGPNDEWVGGKTVLVQVGDQLDRGDTELAVLRLLYRLQDTAPAAGGKVHILLGNHELMNVEHDFRYVTQGGFAEFAREVEKTGREPDLSKVPTPVIESIKAMPQWMRPRALAFRPGGTEATLMANRMQVAVVVGDNLFVHGGLKPEHV---TEP--DALETMNKNTRQFLLGKADKPTALRGGKSPVWMRNFSRPVPETSDCSMLTR---TLQLTNTRRMIVGHTPQAAGVNGACSGRVWRVDTGMSSAYGGIPEALEITPKRVRILTPRGVQAGNSRMRR 391
BLAST of mRNA_H-elongata_contig8578.16162.1 vs. uniprot
Match: A0A4Y6PZ94_9DELT (Calcineurin n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PZ94_9DELT) HSP 1 Score: 205 bits (521), Expect = 6.500e-57 Identity = 113/277 (40.79%), Postives = 153/277 (55.23%), Query Frame = 2
Query: 2 DAFRSCLRMANVVDADDAWAGGETVVVQLGDIFDRGNDDLPIEEWVYRLAMDAGRTNGAVYSILGNHEMMNAMGDHSMATRKAFIPFEDLQPELDELTGDDLSDLDDIPKWARCRLLAMSPGGPVARLLSAHAVCMKVGENLFAHGGLLPEHLLSATEDVDQAMEDLNRAACSWLLGEAPIPEAIWGESS--PLWIRLYSSPDSRDVDDTARTQLEEVLRLTGTKRLFVGHTPQRMGINSGADGQVWRVDTGMSAMMGGRPEVLEIKGQEISILTES 826
+AF LR++ ++D + W GGETV VQ GD+ DRG+D+ I + RL A G V ++ GNHE MN GD T + F F ++ + G + +P+ R RL A PGGPVA+LLS H + VG+++F HGGLLPEH D +E +N W+LGEA P + P W+RLYS R ++ A L+ L G +R+ VGHTPQ GI S DG+VWR+D GMSA GG P+ LEI G E+ +L E+
Sbjct: 77 EAFERALRLSGLIDDEGNWTGGETVFVQTGDLLDRGDDEPEIIALMERLEKQAKAAGGKVVALNGNHETMNVRGDLRYVTPEGFTDFHGVEGVQTDRPG-----FERVPEDKRERLAAFLPGGPVAKLLSHHNMVAVVGDSVFVHGGLLPEH-------ADYGIERINDETRRWMLGEADAPAFMQSRDPMPPNWVRLYS----RQTNEAACETLDAALEKLGAERMVVGHTPQMSGITSACDGKVWRIDVGMSAHYGGTPQALEISGDEVRVLREN 337
BLAST of mRNA_H-elongata_contig8578.16162.1 vs. uniprot
Match: A0A7S1XDL0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDL0_9RHOD) HSP 1 Score: 204 bits (519), Expect = 2.440e-56 Identity = 119/296 (40.20%), Postives = 166/296 (56.08%), Query Frame = 2
Query: 2 DAFRSCLRMANVVDADDAWAGGETVVVQLGDIFDRGNDDLPIEEWVYRLAMDAGRTNGAVYSILGNHEMMNAMGDHSMATRKAF------IPFEDLQPELDELTGDDLSDLD---DIPKWARCRLLAMSPGGPVARLLSAHA-VCMKVGENLFAHGGLLPEHLLSATEDVDQAMEDLNRAACSWLLGEAPIPEAIWGESSPLWIRLYSSPDSRDVDDTARTQLEEVLRLTGTKRLFVGHTPQRMGINSGADGQVWRVDTGMSAMMGGRPEVLEIKGQEISILTESRSIAANKRVAR 859
DAFRS LR A ++ +D W+GG +V+VQ+GD DRG+++ I + ++RL +A GAV+ +LGNHE+MN D T + F +P + + EL ++ G + + D ++P W R R LA PGGP++ L A V + VG+N+F HGGL PEHL + +D+ LN +L G+ P + G PLW+R YS P + D L L KR+ VGH+ Q+ GINS G+VWRVDTGMS+ GG PE LEI I ILT +A+ RV R
Sbjct: 73 DAFRSVLRNAGLISPNDEWSGGSSVLVQVGDQLDRGDNEREILDLLFRLQGEAKENGGAVHVLLGNHEVMNVDSDFRYVTPRGFEDFSTVLPKDSINRELRKVAGSNSAWADMIKNMPDWMRPRALAFRPGGPISSNLFTRAQVAVVVGDNVFVHGGLKPEHLPDGLDSIDK----LNDECHGFLRGKREKPIVLRGGKGPLWMRNYSRPIPTEADCQ---MLFRTLERLNAKRMIVGHSVQKQGINSACGGRVWRVDTGMSSAYGGTPEALEITPSRIRILTPKGPRSASTRVTR 361
BLAST of mRNA_H-elongata_contig8578.16162.1 vs. uniprot
Match: A0A2V3IKD4_9FLOR (Shewanella-like protein phosphatase 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKD4_9FLOR) HSP 1 Score: 204 bits (520), Expect = 3.230e-56 Identity = 115/288 (39.93%), Postives = 167/288 (57.99%), Query Frame = 2
Query: 2 DAFRSCLRMANVVDADDAWAGGETVVVQLGDIFDRGNDDLPIEEWVYRLAMDAGRTNGAVYSILGNHEMMNAMGDHSMATRKAFIPFEDLQPELDELTGDDLSDLDDIPKWARCRLLAMSPGGPVARLLSAHA-VCMKVGENLFAHGGLLPEHL---LSATEDVDQAMEDLNRAACSWLLGEAPIPEAIWGESSPLWIRLYSSPDSRDVDDTARTQLEEVLRLTGTKRLFVGHTPQRMGINSGADGQVWRVDTGMSAMMGGRPEVLEI-KGQEISILTESRSIAANKR 850
DA R+ LR A V+D +D W+GG+TV+VQ+GD+ DRGN + I ++ L A + GAV+ +LGNHE+MNA D TR F F +P + + + + +P + R R +A+SPGG +A L+ A + + VG+N+F H GL +HL + + + D A+ LN ++L+G +P A+ G SP+W+R YS P D + L + L+ KR+ VGHTPQ GINS GQVWR+DTGMSA+ GG PE EI + ++ I T +I KR
Sbjct: 97 DALRTALRSARVLDENDRWSGGDTVLVQVGDVLDRGNHERAIYRLLFSLQDSAPLSGGAVHILLGNHEVMNARLDFRYVTRAGFDEFRGARPRM-QFAPSLVHAIRSLPPFKRPRAVALSPGGSLAAQLALRARLAVIVGDNVFVHAGLRKDHLTDGVHSRKGPDHALNMLNERTSTFLMGMGSLPTALRGGRSPIWMRDYSRPPVLDPGSDVCSMLADTLKFLRAKRMIVGHTPQLQGINSVCTGQVWRIDTGMSAVYGGVPEAFEINRNGKVQIHTPDGAIDGCKR 383
BLAST of mRNA_H-elongata_contig8578.16162.1 vs. uniprot
Match: A0A846P6L0_9BACT (Calcineurin n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A846P6L0_9BACT) HSP 1 Score: 201 bits (510), Expect = 1.020e-55 Identity = 116/274 (42.34%), Postives = 154/274 (56.20%), Query Frame = 2
Query: 2 DAFRSCLRMANVVDADDAWAGGETVVVQLGDIFDRGNDDLPIEEWVYRLAMDAGRTNGAVYSILGNHEMMNAMGDHSMATRKAFIPFEDLQPELDELTGDDLSDLDDIPKWARCRLLAMSPGGPVARLLSAHAVCMKVGENLFAHGGLLPEHLLSATEDVDQAMEDLNRAACSWLLGEAPIPEAIWGESSPLWIRLYSSPDSRDVDDTARTQLEEVLRLTGTKRLFVGHTPQRMGINSGADGQVWRVDTGMSAMMGGRPEVLEIKGQEISILTE 823
+A R LR+A ++ +D W GG+ V+VQ GD DRG+D+ + + RLA +A R G V+++ GNHE+MN D T F F+D +TG D S L +W R R+ A PGG A++L+ + +G+N+F HGG+LPEH VD +E LN WL G+ P PE I SP+W R YS DVD++ L EVL G KR+ VGHT GI S G+VW +D GMSA GG P+VLEIKG I +LTE
Sbjct: 48 EATRRALRLAGAINDEDQWIGGKLVLVQTGDQLDRGDDEQAVLDLFARLAEEAARPGGTVHALNGNHELMNVALDLRYVTPGGFEDFQDAVT----VTGID-SVLAGYEEWQRARVAAFRPGGIYAKVLARRNTVVIIGQNVFVHGGVLPEH-------VDYGLERLNAEVRVWLAGDGPCPEWILKRDSPVWTRRYSL----DVDESDCEMLAEVLIELGAKRMIVGHTDHVKGIASYCHGKVWCIDAGMSAHYGGEPQVLEIKGDTIRVLTE 305 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8578.16162.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8578.16162.1 >prot_H-elongata_contig8578.16162.1 ID=prot_H-elongata_contig8578.16162.1|Name=mRNA_H-elongata_contig8578.16162.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=291bp MANVVDADDAWAGGETVVVQLGDIFDRGNDDLPIEEWVYRLAMDAGRTNGback to top mRNA from alignment at H-elongata_contig8578:973..8359- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8578.16162.1 ID=mRNA_H-elongata_contig8578.16162.1|Name=mRNA_H-elongata_contig8578.16162.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7387bp|location=Sequence derived from alignment at H-elongata_contig8578:973..8359- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8578:973..8359- >mRNA_H-elongata_contig8578.16162.1 ID=mRNA_H-elongata_contig8578.16162.1|Name=mRNA_H-elongata_contig8578.16162.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1746bp|location=Sequence derived from alignment at H-elongata_contig8578:973..8359- (Himanthalia elongata Himel1 dioecious)back to top |