mRNA_H-elongata_contig85705.16154.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig85705.16154.1 vs. uniprot
Match: D7G157_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G157_ECTSI) HSP 1 Score: 129 bits (324), Expect = 5.390e-35 Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 1
Query: 1 GSIVYYEIPGQIDLPKLKEKGLDMDALCRHYIYITEFLWNELDKNPEAKLLTCMDMKGTSLSMFVGEVK 207
GS+VYYEIPG+IDL KL+E GLDMD+LCRHY+YITEFLW ELDKNPE KL TCMDMKGT LSMF GEVK
Sbjct: 125 GSVVYYEIPGKIDLNKLRENGLDMDSLCRHYVYITEFLWKELDKNPEGKLFTCMDMKGTKLSMFAGEVK 193
BLAST of mRNA_H-elongata_contig85705.16154.1 vs. uniprot
Match: A0A835Z260_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z260_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.890e-23 Identity = 45/76 (59.21%), Postives = 57/76 (75.00%), Query Frame = 1
Query: 1 GSIVYYEIPGQIDLPKLKEKGLDMDALCRHYIYITEFLWNELDKNPEAKLLTCMDMKGTSLSMFVGEVKVGHKEYM 228
G +VYYEIPG+ DL KL+E G+D+D L RHYIYITEF+W LD E+KLL+ MD++G SL+ F GEV+ EYM
Sbjct: 104 GCLVYYEIPGETDLKKLRENGVDIDQLIRHYIYITEFIWRRLDTGEESKLLSIMDLRGVSLAQFAGEVR----EYM 175
BLAST of mRNA_H-elongata_contig85705.16154.1 vs. uniprot
Match: A0A1V9ZL35_9STRA (SEC14 cytosolic factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZL35_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 4.080e-12 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 1 GSIVYYEIPGQIDLPKLKEKGLDMDALCRHYIYITEFLWNELDKNPEAKLLTCMDMKGTSLSMFVGEV 204
G+ VYYE G+IDL +LK GL++D L RHY+YITE+LW EL+ + + ++ +D +G GEV
Sbjct: 515 GNCVYYEKLGKIDLKRLKGAGLNLDQLLRHYMYITEYLWLELEPSDTGRTISVLDAEGVGFYDLTGEV 582
BLAST of mRNA_H-elongata_contig85705.16154.1 vs. uniprot
Match: A0A7S2U9B8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9B8_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 5.030e-12 Identity = 29/68 (42.65%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 1 GSIVYYEIPGQIDLPKLKEKGLDMDALCRHYIYITEFLWNELDKNPEAKLLTCMDMKGTSLSMFVGEV 204
G +VYYE P +++L LKE G+++D L RHY ++TEF W +D + A+ +D++G L F GEV
Sbjct: 181 GEVVYYETPAKMNLKVLKEGGVNLDILLRHYAFVTEFSWQHIDTSETARSTYVIDLQGIKLMDFAGEV 248
BLAST of mRNA_H-elongata_contig85705.16154.1 vs. uniprot
Match: A0A7S1UKD6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKD6_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 3.600e-11 Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 1 GSIVYYEIPGQIDLPKLKEKGLDMDALCRHYIYITEFLWNELDKNPEAKLLTCMDMKGTSLSMFVGEVK 207
G +VYYE G IDL L+++GL +D L RHY++ TEF+W ++LT D++G ++S G+ K
Sbjct: 298 GDVVYYEQVGNIDLAALRDRGLSIDLLVRHYLFTTEFMWRMTHPTTGGRVLTIFDVEGVAISDLGGDAK 366
BLAST of mRNA_H-elongata_contig85705.16154.1 vs. uniprot
Match: A0A7S2SMN2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMN2_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.700e-10 Identity = 29/68 (42.65%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 1 GSIVYYEIPGQIDLPKL-KEKGLDMDALCRHYIYITEFLWNELDKNPEAKLLTCMDMKGTSLSMFVGE 201
GS VY E PG +P L K+ G+ M+A+ RHY +I+E+LWN LD+ + KL++ D+ G + VG+
Sbjct: 20 GSFVYVERPGLASIPALLKKPGVSMEAVVRHYTFISEYLWNWLDRRQDGKLVSVWDVTGVGMHDLVGD 87
BLAST of mRNA_H-elongata_contig85705.16154.1 vs. uniprot
Match: A0A1E7FMD6_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FMD6_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 5.910e-10 Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 1 GSIVYYEIPGQIDLPKLKEKGLDMDALCRHYIYITEFLWNELDKNPEAKLLTCMDMKGTSLSMFVGE 201
G V+YE P + DL KLK G+ + +L RHY +TEF W L+ N A+ +T +D++G + FVGE
Sbjct: 334 GEPVFYEQPPKTDLQKLKNGGVTLISLVRHYTMVTEFQWQFLESNDFARSITVLDLEGIRMMDFVGE 400
BLAST of mRNA_H-elongata_contig85705.16154.1 vs. uniprot
Match: B8CAC2_THAPS (Phosphatidylinositol/phosphatidylcholine transfer protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAC2_THAPS) HSP 1 Score: 60.1 bits (144), Expect = 9.170e-9 Identity = 28/68 (41.18%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 10 VYYEIPGQIDLPKLKEKGLDMDALCRHYIYITEFLWNELDKN---PEAKLLTCMDMKGTSLSMFVGEV 204
VYYE P +I+L LK+ GL ++ L RHY ITEF+W+ + + P ++ +T +D+ G + FVG+V
Sbjct: 156 VYYESPAKINLEALKQNGLSLENLIRHYALITEFMWSYVSPHQHGPMSRGITVIDLDGMRMRDFVGDV 223
BLAST of mRNA_H-elongata_contig85705.16154.1 vs. uniprot
Match: A0A6H5K979_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K979_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 1.010e-8 Identity = 25/68 (36.76%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 1 GSIVYYEIPGQIDLPKLKEKGLDMDALCRHYIYITEFLWNELDKNPE-AKLLTCMDMKGTSLSMFVGE 201
G V+ E+PG+IDLP ++ G+ +AL RHY+++TE++W L+ + E + +T +D++G + GE
Sbjct: 361 GCPVWIELPGRIDLPAIRSAGVSPEALQRHYVFVTEYMWGVLEPDFENGQAVTVLDVQGLGMRDLAGE 428
BLAST of mRNA_H-elongata_contig85705.16154.1 vs. uniprot
Match: D8LBN1_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN1_ECTSI) HSP 1 Score: 60.1 bits (144), Expect = 1.020e-8 Identity = 25/68 (36.76%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 1 GSIVYYEIPGQIDLPKLKEKGLDMDALCRHYIYITEFLWNELDKNPE-AKLLTCMDMKGTSLSMFVGE 201
G V+ E+PG+IDLP ++ G+ +AL RHY+++TE++W L+ + E + +T +D++G + GE
Sbjct: 363 GCPVWIELPGRIDLPAIRSAGVSPEALQRHYVFVTEYMWGVLEPDFENGQAVTVLDVQGLGMRDLAGE 430 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85705.16154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig85705.16154.1 >prot_H-elongata_contig85705.16154.1 ID=prot_H-elongata_contig85705.16154.1|Name=mRNA_H-elongata_contig85705.16154.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bp GSIVYYEIPGQIDLPKLKEKGLDMDALCRHYIYITEFLWNELDKNPEAKLback to top mRNA from alignment at H-elongata_contig85705:1751..2621+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig85705.16154.1 ID=mRNA_H-elongata_contig85705.16154.1|Name=mRNA_H-elongata_contig85705.16154.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=871bp|location=Sequence derived from alignment at H-elongata_contig85705:1751..2621+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig85705:1751..2621+ >mRNA_H-elongata_contig85705.16154.1 ID=mRNA_H-elongata_contig85705.16154.1|Name=mRNA_H-elongata_contig85705.16154.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=474bp|location=Sequence derived from alignment at H-elongata_contig85705:1751..2621+ (Himanthalia elongata Himel1 dioecious)back to top |