mRNA_H-elongata_contig8565.16149.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig8565.16149.1
Unique NamemRNA_H-elongata_contig8565.16149.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: D7FXY8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXY8_ECTSI)

HSP 1 Score: 493 bits (1270), Expect = 5.940e-166
Identity = 263/356 (73.88%), Postives = 296/356 (83.15%), Query Frame = 1 
Query:   28 QLHYERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLNWEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQSQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLKRDEGDEXXXXXXXXXXXXXXX--VGYVFVKDYKFNIIHYAQTHYDGNPHLMFMINPDTSEATYCRLSAKVELANLPREQGQPKTGRGARVSHREVSEEEMINAHKKISADLQLEGDYDYLAGLGGIQENGYAESAEGG 1089
            +LHYERDLGV ID+IDPR Y+LP+  VPLP EDEALLNW EGD P S ++E LSTSARR+ V TSVTWLKKTVYLTND FDPVHQFKSEQQ+QADK++ELE+EIARG  QDRKML EESF+HANS KPLVH D +KRHL AEW+MPVMPDVSLWPNTYTTV FDKDPA D+ VKGS+ARKRKRA EALVCNVKRTTFEGNS+E+ITGSYLMPK K  K+ EG  XXXXXXXXX        VGY FVKDYKFNI+HYAQT YDGNPHL+F+IN DT EA++C+LSAKVELANLPR QGQP TGRGA VS R +S EE+ NA KK+SADLQLEG+Y Y+AG  G+   G+A   + G
Sbjct:   68 KLHYERDLGVPIDVIDPRNYLLPKKAVPLPPEDEALLNWREGDGPGSVKKEDLSTSARRKTVDTSVTWLKKTVYLTNDPFDPVHQFKSEQQTQADKEVELEKEIARGKKQDRKMLIEESFLHANSNKPLVHQDASKRHLTAEWVMPVMPDVSLWPNTYTTVMFDKDPAADETVKGSEARKRKRAGEALVCNVKRTTFEGNSHEVITGSYLMPKGKATKKGEGXXXXXXXXXXXKMDVEDGSVGYDFVKDYKFNIVHYAQTQYDGNPHLLFVINKDTQEASFCKLSAKVELANLPRGQGQPATGRGAVVSKRSLSPEEVSNARKKVSADLQLEGEY-YIAGEDGLSNGGHAAGGDTG 422
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BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: A0A835YRH5_9STRA (Paf1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH5_9STRA)

HSP 1 Score: 218 bits (556), Expect = 2.180e-59
Identity = 141/337 (41.84%), Postives = 201/337 (59.64%), Query Frame = 1 
Query:   28 QLHYERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLNWE--EGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQSQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDD-AVKGSKARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLKRDEGDEXXXXXXXXXXXXXXXVGYVFVKDYKFNIIHYAQTHYDGNP-------HLMFMINPDTSEATYCRLSAKVELANLPREQGQPKTGRGARVSHREVSEEEMINAHKKISADL 1008
            +LH  RDLGV IDIID R Y +P  P  L  +D  LL W+  E    ++   E  S   +R+ V TSVTWLKKTVYLTND FD VH+F+S++Q Q D +  +++++      DR     +SF  ANS+K LVH+    + L  EW+MPV+PD +LW NTYT V FD DP E++  + G + RKR+RA++A+V NV++   + + +E +TGSY++PKE      EG    X   XX        G+ +VKDY+ N+ +Y     D          HL+F+I+  +S+AT+C+LSA+V+LANLP E  Q   G G  V+ R  S+EE     +K++ DL
Sbjct:  152 KLHCNRDLGVDIDIIDSRSYSVPDKPPTLHPKDAELLQWDKVERGNGAAEAEEGFSRRMQRKQVDTSVTWLKKTVYLTNDPFDAVHKFRSDRQVQMDAKERMQKDMEESRKTDRVSAVLQSFAEANSKKKLVHA--TNKSLTPEWVMPVLPDAALWGNTYTHVVFDIDPIEEEHLIAGPRQRKRQRADKAIVGNVRKLR-KSDGDEFVTGSYMVPKEA----GEGG-GGXSAEXXEKGAEGGTGFAWVKDYQMNVQNYPAGQGDSGSGSSGAMAHLVFIIDQASSKATFCQLSARVDLANLPAED-QANRGPGMEVARRPPSDEEFQAMGEKVAKDL 479
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BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: F0W354_9STRA (RNA polymerase IIassociated factor 1 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W354_9STRA)

HSP 1 Score: 122 bits (307), Expect = 7.020e-26
Identity = 96/312 (30.77%), Postives = 161/312 (51.60%), Query Frame = 1 
Query:   28 QLHYERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLNWEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQSQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLKRDEGDEXXXXXXXXXXXXXXXVGYVFVKDYKFNIIHYAQTHYDGNPHLMFMINPDTSEATYCRLSAKVELANLPREQGQPKTGRGARVSHREVS 963
            ++H E +LG++ID+IDP KY +P    PL   DEA+L  +E         ++  T ++ R V   V+WL++T Y+ ND ++PVH+FKSE + Q++ +   E  +A       K  +E+SF   N  + LVH  K  ++LK   I  V PD SL+PN Y  +++D  P+ DD  K    R+ +    AL+C V R + EG+ +  I GS L+P   + +  + +                  Y + ++Y  ++        + + + +FM++P++ E TYC L  +++L    +  G+ +  RGA V  RE S
Sbjct:  165 EIHEEPNLGLSIDLIDPAKYEVPTVTEPLEAGDEAVLMMKET--------QSKDTKSKARPV---VSWLRRTEYMGNDLYEPVHKFKSEVEFQSELREGTENALAEEVQVTLKQRAEDSFKDVNDPEVLVHPFK--KNLKPAKIWDVYPDQSLYPNKYAHLSYDVLPSMDDKGKSIPQRESR----ALLCGVSRKS-EGSDH--IQGSILLPVSAQAENPDAEVGEK--------------YGYFREYLLSVQQLDNKGKEDSQNRLFMLDPESQEFTYCELLHRIQLKKT-KFTGEDQRRRGAIVHRREYS 441
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BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: A0A8K1CCM9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCM9_PYTOL)

HSP 1 Score: 117 bits (292), Expect = 5.150e-24
Identity = 92/316 (29.11%), Postives = 163/316 (51.58%), Query Frame = 1 
Query:   28 QLHYERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLNWEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQSQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLKRDEGDEXXXXXXXXXXXXXXXVGYVFVKDYKFNIIHYAQTHYDGNPHLMFMINPDTSEATYCRLSAKVELANLPREQGQPKTGRGARVSHREVSEEEM 975
            ++H + +LG+ ID+IDP KY +P+NP PL   DE +L  +E +   +G+ +A          + SVTWL++T Y+  D  +  H+FKSE + Q+  +   E  +A       +  +E SF  A++ K LVH  K  ++LKA  +  V PD  + PN Y  +++D  P++D  +KG    +R+  + AL+C V +   +    +++ GS L+P  +  +  + DE                 + + ++Y+ +I        D + H++FM++P+++  TY  L  +++L    +  G  K  RGA V  R+ SE E+
Sbjct:  163 EVHEDSNLGLNIDLIDPAKYEVPENPGPLEVGDEQVLMMKEVNA-KNGKAKA----------RPSVTWLRRTEYMGTDLSEMTHKFKSEVEIQSALREGTENALAEVVQLSLEDRAEASFRDASNAKTLVHPFK--KNLKAAKVWDVFPDQIVAPNKYAILSYDLLPSQD--LKGKSVTERE--SRALLCGVSK---KSQGADVVQGSILLPNARDEEEKDNDEPQAEK------------FGYYREYQLSIDVLENRVRDESQHVIFMLDPESNHFTYADLLHRIQLRKT-KLNGDEKRRRGAIVRRRDYSEAEL 445
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BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: A0A7S3YEK7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEK7_HETAK)

HSP 1 Score: 107 bits (267), Expect = 1.650e-22
Identity = 72/235 (30.64%), Postives = 122/235 (51.91%), Query Frame = 1 
Query:  199 RRRAVKTSVTWLKKTVYLTNDTFD-PVHQFKSEQQSQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPA-EDDAVKGSK--ARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLKRDEGDEXXXXXXXXXXXXXXXVGYVFVKDYKFNIIHYAQTHYDGNPHLMFMINPDTSEATYCRLSAKVEL 891
            +R++V T+VTW+K+T YL+ND +  PVH FKS+  + A++   L++E+     Q      E +F HA ++            L+AEW +PV+PDV LW N +  V FD DP  +DD  K  +  A K++R  +A++ +V+     G S  ++  SYL+PK  +    EG E               + +  ++ Y+ ++     T        +F+++ +  +ATYCRL  +V+L
Sbjct:    8 KRKSVDTNVTWMKRTTYLSNDLYGAPVHAFKSQAAAVAEQNAGLDQEMVEVNLQSAATKIEATF-HAAAKDLAALRHPTNPGLRAEWALPVLPDVGLWANVFMHVGFDLDPVTQDDPNKDPEHIAEKKQRFEKAIISDVRENEGGGTSKPVMVASYLVPKAGQTGAGEGGE---------------LAFEHLRGYQIDVRDTENT-------FVFLVDAEGGQATYCRLDTRVDL 219
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BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: A0A067CSA2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CSA2_SAPPC)

HSP 1 Score: 105 bits (261), Expect = 2.110e-20
Identity = 100/334 (29.94%), Postives = 158/334 (47.31%), Query Frame = 1 
Query:   40 ERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLNWEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQSQA---DKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLKRD-EGDEXXXXXXXXXXXXXXXVGYVFVKDYKFNIIHYAQTHYDGNPHLMFMINPDTSEATYCRLSAKVELANLPREQGQPKTGRGARVSHREVSEEEMINAHKKISADLQLEGDYD 1029
            ER+LG+T+D+IDP KY +P     +  EDEAL+   E              S  +  ++  V+WL++T Y+  D  + VH FK+E + Q    DK   + + I     +D ++ +EESF +  +++ + H    K++LKA  +  V PD  L  N Y+ +++D  P+E+      K R+ +    +++ NV   T     ++++ GS L P     K D EG E                 + F +DY  NI H+     +    LM M+ P TS ATYC LS  + L    +  G  K  RGA V  R  SE E     K++ + + + G YD
Sbjct:  112 ERNLGLTVDLIDPEKYEVPVG-AQMDPEDEALMKMPEI---------VNGASLTKAKIRPHVSWLRRTEYMATDLSEAVHAFKNESELQTEIRDKNQSMLQVI-----KDIEVRAEESFTNCPTKETVKHP--LKKNLKAAEVWDVFPDELLSSNVYSILSYDILPSEETTDANIKEREAR----SILRNV--VTVSQPGSDVLLGSVLFPSTHDDKSDDEGSEK----------------FKFFRDYILNISHFP----NDVQQLMLMLKPGTSAATYCGLSTNIMLKKT-KLGGDEKRRRGAVVHRRPYSEAE---EEKRLESLMAVGGVYD 398
[Close]
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: A0A024FZ64_9STRA (Uncharacterized protein n=8 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ64_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.810e-18
Identity = 94/335 (28.06%), Postives = 156/335 (46.57%), Query Frame = 1 
Query:   28 QLHYERDLGVTIDIIDPRKY--------------------ILPQNPVPLPKEDEALLNWEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQSQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLKRDEGDEXXXXXXXXXXXXXXXVGYVFVKDYKFNIIHYAQTHYDGNPHLMFMINPDTSEATYCRLSAKVELANLPREQGQPKTGRGARVSHREVSEEE 972
            ++H E +LG++ID+IDP KY                     +P    PL   DEA+L  +E         ++  T  + R V   V+WL++T Y+ ND ++PVH+FKSE + Q++ +   E  +A       +  +E+SF   N    +VH  K  ++LKA  +  V PD SL+PN Y  +++D  P+ DD  K    R+ +    AL+C V R   EG+ +  I GS L+P   + +  + +                +    + + +  +I Y +  Y   P      +P++ E TYC L  +++L    +  G+ +   GA V  RE S+ E
Sbjct:  165 EIHEEPNLGLSIDLIDPAKYEGRSLDGHLYGRVLMFCVIDTVPTKAEPLEAGDEAVLMMKET--------QSKDTKYKARPV---VSWLRRTEYMGNDLYEPVHKFKSEVEFQSELREGTENALAEEVQVTLEQRAEDSFKDINDPSLIVHPFK--KNLKAAKVWDVYPDQSLYPNKYAHLSYDVLPSTDDKGKSIPQRESR----ALLCGVSRKN-EGSDH--IQGSILLPVSAQAENPDAE----VGEKYGYFREYLLSVQQLDNVRQELILYLRLLYSRRPE-----HPESQEFTYCELLHRIQLKKT-KISGEDQRRHGAIVHRREYSKAE 469
[Close]
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: F0XY28_AURAN (AP2/ERF domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY28_AURAN)

HSP 1 Score: 75.5 bits (184), Expect = 2.520e-10
Identity = 74/218 (33.94%), Postives = 104/218 (47.71%), Query Frame = 1 
Query:   31 LHYERDLGVTIDIIDPRKYILPQNPVP-LPKEDEALLNWEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKS---EQQSQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKR---ANEALVCNVKRTTFEGNSNEIITGSYLMP 663
            LH E D+GV ID+I  +    P +P   LP EDEA+L   E  + +  +       AR +    S  WLK TVYL+N+   PVH+F S   EQQ  A + +  + E   G        S  +    +     +  DK K HLKAE+ +P+ PD+ LW N+Y  VA   DP  D AV+G      K       ALV  V  T+ +   + +++ SY  P
Sbjct:  380 LHCEPDVGVKIDLI--KGDTPPGDPTNVLPAEDEAILKSLEPLMGADDK--GGDAFARGKKHAKSAVWLKNTVYLSNNLHAPVHEFGSRAKEQQKLAAETMNAKIEHVGGTGAKAVDASFAAAAALDGDLAALKHDK-KPHLKAEFCVPLAPDLDLWANSYVQVAVRDDP--DFAVRGRTDEFGKPLPLGTTALVSKVCTTSHKRRGHNVLSASYSTP 590
[Close]
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: A0A835ATR3_9POAL (Uncharacterized protein n=4 Tax=Paniceae TaxID=147428 RepID=A0A835ATR3_9POAL)

HSP 1 Score: 71.2 bits (173), Expect = 3.340e-9
Identity = 55/182 (30.22%), Postives = 92/182 (50.55%), Query Frame = 1 
Query:    1 SSIRNHANAQLHYERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLNWEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQSQADKQLELEREIARGGNQDRKM---LSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAED 537
            +S+  +   ++    DLG+ +D++D   Y  P   +P+  EDE LL  +E   P   ++E +    + R     V+WL KT Y+++ + D      +E+Q++  ++  + R        DR+      EESF  A S+   VH  + KR +KAEW+MP++PD   + + Y  V FD DP  D
Sbjct:  276 TSLEKNYMPKMIVPEDLGIPLDLLDMSVYNPPAVQLPIAPEDEELLQDDEVHTPI--KQEGIRK--KERPTDKGVSWLVKTQYISSLSTDAAKTSLTEKQAKEMRESRMGRNTFLDNLNDREKQIKAIEESFRAAKSQP--VH--QTKRGMKAEWVMPLLPDFDRYEDPYVMVNFDGDPTAD 449
[Close]
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Match: A0A7S0IQP9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IQP9_9EUKA)

HSP 1 Score: 70.1 bits (170), Expect = 7.770e-9
Identity = 61/231 (26.41%), Postives = 101/231 (43.72%), Query Frame = 1 
Query:   28 QLHYERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLN--WEEGDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSE---QQSQADKQLELEREIARGGNQD---RKM-----LSEESFMHANSRKPLVHSDKNKRHLKAEWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKRANEALVCNVKRTTFEGNSNEIITGSYLMPKEKKLK 681
            +L  E DLG+ ID++DP  Y         P++ E L +    E   PSS     ++ SA  + ++  +TWL+KT  + N+ ++  H+   E   + S    + E    +  G   D   RK+     + E+SF                  LKAE ++PV+PD   W N+Y  + FD DP  + A        RKR  + +V        +G   +    +YL+PK + ++
Sbjct:  283 ELLAEPDLGIAIDLVDPSVYEAAPGATLAPEDQELLTSAATHERSAPSS-----MNKSAVTKQMRNKITWLRKTQLMGNNLYEATHKHPKEHVERDSYRKSKKESSALVTAGSGSDPFRRKIGEIVDVIEQSFADVEKLGCGQIKHPTNAALKAEAVLPVLPDFDCWENSYVQMQFDFDPGLEHAASDKSKLSRKRLAQGIVKGQSTPARDGQPAQRYV-AYLLPKSEPVE 507
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8565.16149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7FXY8_ECTSI5.940e-16673.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YRH5_9STRA2.180e-5941.84Paf1-domain-containing protein n=1 Tax=Tribonema m... [more]
F0W354_9STRA7.020e-2630.77RNA polymerase IIassociated factor 1 putative n=1 ... [more]
A0A8K1CCM9_PYTOL5.150e-2429.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3YEK7_HETAK1.650e-2230.64Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A067CSA2_SAPPC2.110e-2029.94Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A024FZ64_9STRA2.810e-1828.06Uncharacterized protein n=8 Tax=Albugo candida Tax... [more]
F0XY28_AURAN2.520e-1033.94AP2/ERF domain-containing protein n=1 Tax=Aureococ... [more]
A0A835ATR3_9POAL3.340e-930.22Uncharacterized protein n=4 Tax=Paniceae TaxID=147... [more]
A0A7S0IQP9_9EUKA7.770e-926.41Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8565contigH-elongata_contig8565:59..9432 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score500.0
Seed ortholog evalue1.3e-138
Seed eggNOG ortholog2880.D7FXY8
Preferred namePAF1
KEGG rclassRC00080,RC00216,RC00242,RC00255
KEGG koko:K00294,ko:K11673,ko:K15174
KEGG ReactionR00245,R00707,R00708,R04444,R04445,R05051
KEGG Pathwayko00250,ko00330,ko01100,ko04011,map00250,map00330,map01100,map04011
GOsGO:0000018,GO:0000082,GO:0000083,GO:0000122,GO:0000183,GO:0000278,GO:0000414,GO:0000416,GO:0000428,GO:0000785,GO:0000981,GO:0000983,GO:0000988,GO:0000989,GO:0000993,GO:0001015,GO:0001076,GO:0001098,GO:0001099,GO:0001704,GO:0001706,GO:0001711,GO:0001932,GO:0001934,GO:0002237,GO:0002682,GO:0002683,GO:0003674,GO:0003682,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006289,GO:0006323,GO:0006325,GO:0006333,GO:0006342,GO:0006351,GO:0006353,GO:0006354,GO:0006355,GO:0006356,GO:0006357,GO:0006360,GO:0006362,GO:0006364,GO:0006366,GO:0006368,GO:0006378,GO:0006396,GO:0006397,GO:0006464,GO:0006479,GO:0006513,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007275,GO:0007369,GO:0007492,GO:0007507,GO:0008023,GO:0008104,GO:0008150,GO:0008152,GO:0008213,GO:0009058,GO:0009059,GO:0009302,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009790,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009909,GO:0009910,GO:0009987,GO:0010033,GO:0010390,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016074,GO:0016458,GO:0016567,GO:0016569,GO:0016570,GO:0016571,GO:0016574,GO:0016584,GO:0016591,GO:0016593,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019827,GO:0019899,GO:0022402,GO:0022607,GO:0022613,GO:0030054,GO:0030154,GO:0030880,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031123,GO:0031124,GO:0031126,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031396,GO:0031399,GO:0031401,GO:0031440,GO:0031442,GO:0031497,GO:0031935,GO:0031938,GO:0031974,GO:0031981,GO:0032259,GO:0032268,GO:0032270,GO:0032446,GO:0032496,GO:0032501,GO:0032502,GO:0032774,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033182,GO:0033365,GO:0033523,GO:0033554,GO:0033993,GO:0034243,GO:0034470,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0034728,GO:0035327,GO:0035987,GO:0036211,GO:0040029,GO:0042221,GO:0042254,GO:0042325,GO:0042327,GO:0043144,GO:0043170,GO:0043175,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043628,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0044877,GO:0045165,GO:0045309,GO:0045595,GO:0045596,GO:0045637,GO:0045638,GO:0045787,GO:0045814,GO:0045892,GO:0045893,GO:0045910,GO:0045934,GO:0045935,GO:0045937,GO:0045943,GO:0045944,GO:0046483,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048581,GO:0048583,GO:0048598,GO:0048646,GO:0048731,GO:0048831,GO:0048856,GO:0048869,GO:0050684,GO:0050685,GO:0050789,GO:0050793,GO:0050794,GO:0050815,GO:0050896,GO:0051052,GO:0051053,GO:0051093,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051219,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051569,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055029,GO:0060255,GO:0060795,GO:0060968,GO:0061695,GO:0065007,GO:0070013,GO:0070063,GO:0070647,GO:0070727,GO:0070887,GO:0070911,GO:0071103,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071396,GO:0071704,GO:0071824,GO:0071840,GO:0072359,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090262,GO:0090304,GO:0097659,GO:0098727,GO:0098781,GO:0099122,GO:0140110,GO:1901360,GO:1901362,GO:1901407,GO:1901409,GO:1901564,GO:1901576,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1902806,GO:1902808,GO:1903047,GO:1903311,GO:1903313,GO:1903320,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1903707,GO:1905269,GO:1990234,GO:1990269,GO:2000026,GO:2000112,GO:2000113,GO:2000241,GO:2000242,GO:2000819,GO:2001020,GO:2001141,GO:2001163,GO:2001165,GO:2001166,GO:2001173,GO:2001207,GO:2001209,GO:2001252,GO:2001253,GO:2001255
EggNOG free text desc.transcription elongation from RNA polymerase II promoter
EggNOG OGsKOG2478@1,KOG2478@2759
Ec32 ortholog descriptionRNA polymerase II-associated, Paf1
Ec32 orthologEc-19_002080.1
EC1.2.1.88
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03021,ko03036
Hectar predicted targeting categoryother localisation
Exons11
Model size1945
Cds size1503
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8565.16149.1prot_H-elongata_contig8565.16149.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig8565 501..9432 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931259.3931308-UTR-H-elongata_contig8565:58..5001622931259.3931308-UTR-H-elongata_contig8565:58..500Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8565 59..500 -
1691679763.2796772-UTR-H-elongata_contig8565:58..5001691679763.2796772-UTR-H-elongata_contig8565:58..500Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8565 59..500 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931259.4105816-CDS-H-elongata_contig8565:500..6991622931259.4105816-CDS-H-elongata_contig8565:500..699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 501..699 -
1691679763.2925277-CDS-H-elongata_contig8565:500..6991691679763.2925277-CDS-H-elongata_contig8565:500..699Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 501..699 -
1622931259.425402-CDS-H-elongata_contig8565:1478..15911622931259.425402-CDS-H-elongata_contig8565:1478..1591Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 1479..1591 -
1691679763.3008606-CDS-H-elongata_contig8565:1478..15911691679763.3008606-CDS-H-elongata_contig8565:1478..1591Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 1479..1591 -
1622931259.4382803-CDS-H-elongata_contig8565:2091..23371622931259.4382803-CDS-H-elongata_contig8565:2091..2337Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 2092..2337 -
1691679763.308855-CDS-H-elongata_contig8565:2091..23371691679763.308855-CDS-H-elongata_contig8565:2091..2337Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 2092..2337 -
1622931259.459925-CDS-H-elongata_contig8565:3123..31861622931259.459925-CDS-H-elongata_contig8565:3123..3186Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 3124..3186 -
1691679763.3178089-CDS-H-elongata_contig8565:3123..31861691679763.3178089-CDS-H-elongata_contig8565:3123..3186Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 3124..3186 -
1622931259.4750297-CDS-H-elongata_contig8565:3797..38871622931259.4750297-CDS-H-elongata_contig8565:3797..3887Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 3798..3887 -
1691679763.328136-CDS-H-elongata_contig8565:3797..38871691679763.328136-CDS-H-elongata_contig8565:3797..3887Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 3798..3887 -
1622931259.4914691-CDS-H-elongata_contig8565:4208..43641622931259.4914691-CDS-H-elongata_contig8565:4208..4364Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 4209..4364 -
1691679763.3397582-CDS-H-elongata_contig8565:4208..43641691679763.3397582-CDS-H-elongata_contig8565:4208..4364Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 4209..4364 -
1622931259.5106845-CDS-H-elongata_contig8565:5073..51511622931259.5106845-CDS-H-elongata_contig8565:5073..5151Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 5074..5151 -
1691679763.3559284-CDS-H-elongata_contig8565:5073..51511691679763.3559284-CDS-H-elongata_contig8565:5073..5151Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 5074..5151 -
1622931259.5309532-CDS-H-elongata_contig8565:6809..69561622931259.5309532-CDS-H-elongata_contig8565:6809..6956Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 6810..6956 -
1691679763.3671052-CDS-H-elongata_contig8565:6809..69561691679763.3671052-CDS-H-elongata_contig8565:6809..6956Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 6810..6956 -
1622931259.5454051-CDS-H-elongata_contig8565:7610..77151622931259.5454051-CDS-H-elongata_contig8565:7610..7715Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 7611..7715 -
1691679763.3770473-CDS-H-elongata_contig8565:7610..77151691679763.3770473-CDS-H-elongata_contig8565:7610..7715Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 7611..7715 -
1622931259.5597234-CDS-H-elongata_contig8565:8719..88561622931259.5597234-CDS-H-elongata_contig8565:8719..8856Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 8720..8856 -
1691679763.3928766-CDS-H-elongata_contig8565:8719..88561691679763.3928766-CDS-H-elongata_contig8565:8719..8856Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 8720..8856 -
1622931259.5753675-CDS-H-elongata_contig8565:9263..94321622931259.5753675-CDS-H-elongata_contig8565:9263..9432Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 9264..9432 -
1691679763.4053638-CDS-H-elongata_contig8565:9263..94321691679763.4053638-CDS-H-elongata_contig8565:9263..9432Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8565 9264..9432 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig8565.16149.1

>prot_H-elongata_contig8565.16149.1 ID=prot_H-elongata_contig8565.16149.1|Name=mRNA_H-elongata_contig8565.16149.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=501bp
SSIRNHANAQLHYERDLGVTIDIIDPRKYILPQNPVPLPKEDEALLNWEE
GDVPSSGRREALSTSARRRAVKTSVTWLKKTVYLTNDTFDPVHQFKSEQQ
SQADKQLELEREIARGGNQDRKMLSEESFMHANSRKPLVHSDKNKRHLKA
EWIMPVMPDVSLWPNTYTTVAFDKDPAEDDAVKGSKARKRKRANEALVCN
VKRTTFEGNSNEIITGSYLMPKEKKLKRDEGDEEEEEEEEEDEEEGEGVG
YVFVKDYKFNIIHYAQTHYDGNPHLMFMINPDTSEATYCRLSAKVELANL
PREQGQPKTGRGARVSHREVSEEEMINAHKKISADLQLEGDYDYLAGLGG
IQENGYAESAEGGSQQQGNEEALEEEEEKEEEEGEEGLRENGHVDGEMSL
GHGTAAFLTGRGRTGRGSTCWAWHWSRRRQTLPSRGLKALRETLSAPTRT
TTIRSRNAKSIYQHTINSILKTRSRCHSIILVPSGVLSAESARRAKASVS
*
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mRNA from alignment at H-elongata_contig8565:59..9432-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig8565.16149.1 ID=mRNA_H-elongata_contig8565.16149.1|Name=mRNA_H-elongata_contig8565.16149.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=9374bp|location=Sequence derived from alignment at H-elongata_contig8565:59..9432- (Himanthalia elongata Himel1 dioecious)
TCGTCCATCCGGAACCACGCGAACGCGCAGCTGCACTACGAGCGAGACCT
AGGGGTGACTATAGATATAATCGATCCCAGAAAATACATTTTACCCCAAA
ACCCGGTGCCCTTGCCGAAGGAAGACGAGGCCCTCTTGAACTGGGAAGAG
GGGGACGTCCCAAGCTCGGGTAGGTAGTTTGTTTTTTTTGTCAAAGAAGA
GAGGAGTGGGGTCGGGTGGTGGATTATGCTCGAAGTCCGCTGAAAAGGTT
GGGGTGGGGAGGTCGACGCGACGACATGCTACGGTGATATGATCTCTTGA
GTGCATGAAGTGCGGTTGAATGGTTGGAATATACTCTTACACAAATACAT
ACATACACACACACACACTTCCTTTACGCGCATTATTACTTTCATCGCGG
ACAACGTATAAGAGATGCCGATAAAAATATATTACGGCATTCTTTTGCAT
GCTCTCATTTGTGTACTGTACTGTAGTGTACTGGAGTGTACCCATAAATC
TCATGGTGGAGATTGCCATCGGGAACCATCTTTTCACCAGCCAAGGTGTT
ATCGTGTGCCCCTCCCTCACCGACAGGACGGAGGGAAGCCCTGTCTACCT
CAGCGCGACGCAGGGCGGTTAAGACGTCTGTAACCTGGCTCAAGAAAACA
GTGTATCTTACGAACGACACGTTCGACCCCGTTCACCAGTTCAAGTCGGA
GCAGCAATCTCAGGCAAGAAATAAGAGAAAGGCATCCGAGGGTAGATCAA
ATAGAGCCGGCGGATGTCATGGTATTTCTCCCACCCACTCCTCCTTCTCG
CCCTTCCCTCTCCTTTTCGCCAAAGGATACGGGTAGTGCCGGTGTCGCAA
GCTACGTTTGTTGTGGAACGTATTGGTGAAGCTGCGCAGCTGTTGTTCTT
TTTTGCGGCTTGTAAAGAGAGAAAGCCAGACTGAAACAGATAGTCGTCCT
AAAAGAGGCGTCTCTAAACACTATTAATAGTATATTTTATTGCATTATGC
ATTATGCTGTATAGCGGCCGAGATGGGGATGTGGATGGGAGGGGGGCAGC
AGTGGCGGCAGCGACCTCGTTTGGTGATATGCTTCCCGGTAACCAATCCA
ACATTAATACGAGCAGTATAATCAATGTAACATCAATACGAGTAGTGTAA
CCAATACATTATACGAGTAGTGAATCAATACAATATACATACGAGTAATT
TAATTACTACAATATTAATACCAGTGTGTAACCTTAGTGTCCTTTTCGTC
GACAGGGGGCACACCATATCTGTCCTGTTCTACACTGTATTTAAGAGTAA
TACCAAGTTATTCTGTCAGTCAGTGTAATTATTTTGTTTCTGCGCCTGTT
ATGGCCAAGGGCCGTGAAGTTATGCCGCGCGACGTATTTTCCATCTTTGA
AGCTAGTCCAATATATCAATGGCCTTCAAAGTCAAAGAACAATGGGCTCG
TTAATGAAAATGATTTCCACGTAGTATACACACTACTTCGTATATCGCAT
TATACTAGAATACGATACATCCCTTGTGGGCCAAACATTTATTCGGTTTT
GACATGAGCACGATTCGTCCTTATATCGGGTAAAAGCCCTCGCTCCAAGA
ACGGACAGCTCAAGGCATGAGCCGAATCGAACTGAATCGAGCCGAATTGA
ATTGCTGCCACCAAAGTTGATTGCCGCTACCGCTGCTGCTGTACGGTGTG
CTGGCCGCGGTGTTCAGGCTGACAAGCAGTTGGAGCTGGAGAGGGAGATC
GCTAGGGGAGGGAATCAGGACCGTAAGATGCTCAGCGAGGAATCCTTCAT
GCACGCCAACAGTCGAAAGCCGGTAAGTCATCTCTTTCTTTCTCTCTCTC
TTTATACACATATTTATATTTATTTTTCTCTCCCCGTCCGCCCCCCCCCC
AGGCGATCGCCCGTTTCGTTAGACGTTCCATGGGTTTGAGTTTTGTTGGG
CGTGATGCGGGCGGAGAAGATGGGGTGGAGAAAGGGGCAGGTTGCATTGC
TGGTGATGGATCGGAAGAGGGCGAGAAGGATGGGCTATAGAGGTGTTCGA
TGAGTAAGCGATATGTCACCAGCGTTACACGCAGCACATATAGATAGGCG
ATATAAAATTGGGGGGTACTAAAGCTTTGCGTGTCTTGGCTATGTGACCA
TTGACCATTGACCCCCGTCCTCTGAAGGAACATTGTTCCTATTCAATCGA
TTGCCGATTGTCAATCGTTCCTTCCTACTTTTCCAAAAGTGGCGCCGTTA
TTTATCATCATTTCTCCTATAGTATCCTATCATGCCTACATACGTTTTTG
CCTTCTCAGGCCACTTCCGACCCTCCCGCTATATAAAATGGTGTAAGGCG
TTGTTTTGTGTATTAGAATCCAACCTTCTGCGTTTTCTTCGCTTAAATGC
CTATTGTCTCCATTTTGTCTTATGGGGCTCATGTGTTTGTGTGTGTATGT
GTGTGTGTGTGTCGTGCGACCCCCAGCTGGTGCACTCGGATAAGAACAAG
AGGCATCTGAAGGCGGAGTGGATCATGCCCGTGATGCCGGATGTGTCCCT
CTGGCCGAACACCTACACCACGGTGGCGTTCGACAAAGACCCCGCCGAAG
ACGACGCGGTCAAGGGCTCCAAGGTGCGATAGACGTATCCTCGAATCGGA
ACCAAGCTAACCTGAACGATTTGTGGAACGTAGTCTAGAAAAACGAGCAT
AAAATTTATTTATATCCATCAAAATTATTTTAAAGCTAGATCCCCCACGC
AAACAGTTCTAGGATAATAAGCTTAGGTTTATCGAAATACATTCCCGACC
TACCCTAATCTAACCCACTTTTTGTCAAATTATTTGCAATATTGAGTTGC
CTTTACAACCTCTTGTGATATCATAAAATCGATAGAGCAGTGGTTCTTGC
CCACCAGCTCCCTTCCTAGTCCCCAGCACATTTGATTATACAATACAGTA
CTATGACCACGTATTATTGGCGCCTAACCAAAACACCGAACTGTTCCTAT
TACATTAAAGTACATTACATTACAATATCTATGGCCAACACTGCCCAACA
CGAAGCGTTATATTAAAGCATTTCCCTCCACCCCTCGTACTCTTTGTATT
ATTGATATTTAATAGTGTAGTGTCCCCACATGGCGATGGTGATTGGATGG
TGATGGCGATGTTGATTGGAGCAAGTGGACAGTATAACGGCGGGCTTCTT
CCCGACATTGTGCTGTTAACCCGAGATGCGACTGTCATTGGGAACCCGAA
TAATATCATGTGACGATTTTGTGCTCGTTTTACTCGAACCTGACGATAGT
TGGTCCCCTGGGCCTTACATATCATTTATAAAGAAAGTGTGAATGTTTGG
AGAACTTGAATGAATTCAGTTTTTTTAAAGAAAACACGTCATTAGGAACG
AACCGACACGAAGCCGGAGACAAACCAAAGAGAGGCTTCAAGCGAAAATA
AAATCGAACTGAAACGAAGCGAGGGAGGCGAAGCGACACGAAGGTTTTCC
CTATCTTATTAATAACGCGGCCCTAGCTACGGTAGCAACGGTGTGATTAC
AGTAGGCTTTCCGCGAGTGTTTGTTGGCAGAGGAACAGGAAAAGTGGGTG
GCCAACACTCCCCGCCTCCATCTCCTCCCCAACCCCCCCCTATACAAAAT
ACAAAAACATACATCTACAAAACTCCGTGCGAGTCGTTTTGATTGACGGC
CACCCGTTCGAGGTTAAAACTTGCTCTGGTTCAAAAGTTTGTATTATCAG
GTAGTTTTGGTTCATTCATCAAAACGAAGGTTCATTCATCAAAACGAAGT
GTACACACTTGTGTGTATTTACCTCGGCCGCGTGCTTCAAGCAATATAAT
AATAATATTGAACGGTGTGAGCCGAGTCCTCGTGGCCGCGGTTGCGTAAG
CCGCTTGGGCGTCGGTCGACGTGCCGTAGCTCAAGAGAGAGAAGGTAAAA
ATGGGAGAAAATGAGAAGGTACAAATAAGAGAGATAAGGAGAAGGTACTA
ATGAGAGGAAAGAAAAGGTGCAAATAAGAGATAAAACGGTATGTAGCTGC
GATCGCTCACGAGGAGACTACCCTACAGCCTTCATCAGCAAAGATCCAAA
CGAAACAAGGAACAAGTTGTGAAAAACAAAAAAGACGGCGGAGAGCGACA
TCAGTTTGTGATTATTCGACGCTGTTATGGCTGACGGACGGACGGACCTT
TGGTTGCTCGGTGTCACTTGTGTCCGCTTTGTTATGTGTGTATCTTTCTC
TATGTTTGTGTCTATCGTTTCTTTCGGGCAGGCGCGCAAGAGAAAGAGGG
CGAACGAAGCTCTGGTTTGCAACGTCAAGCGGACGACGTTCGAGGGCAAC
TCGAACGAGGTGACGAGCAGTGGTGTACTATTACTAGTATATTATAGTAT
ATTATAGTATAGTATAGTGTACTATAATATAATACAGTTTAATAATGTAA
TATAATATAGTTGGATACTATTATTCGATATTGTAATAGCGTTGCATACT
ATTATAGTCGCCATATTCTCCTCACCTTACCGGTACTTCCTTAGGGGAAG
ATCAAGTTTTGTTTAGCTCATTAGTAGTATTGATATTATTTCATAAAAAT
ACTTTTTGTTGGGGCGCTATCTTTTTTTGTTTAATCTTCAAGGGAAAAAA
TCATATATCTTTTTGAGTTGAAATTGAAAAAAATCTCGGGCGATCATTGT
CGCTCGCTCACCCGGTCGGCTGTTGCTGTCGTTGTTTTTTGTTTAATGTG
TGTTTTTTTAAAGAAGGTTGGATTGGTCGTTTTCTTCTCGTGAGGGTGTT
CCACGCGATGAAGCGTTTTTACGGGCTTGCGGGTAATCGTTGATGGATTG
ATAGAATTGCGCTGAGTGTGTATGTGTGTGTGCTTGTTGTTTTGTTCCGA
GAGGTGACGCCTCCGAGTGTAAGCTCGCGATTCGTTCTCCGCGGTGGGTA
TCACGAGAAGGGACTGTTTTCCCCGTTCTCCCTTGTCCGTTCCTGTTAAT
GCATTGAATGAGTTCGTGGAACACCCTCCCTTCCCTTTCTCGTTTGGGAC
TTGGCTGGGACCGATCAGATAATTACGGGGTCGTACCTGATGCCGAAAGA
AAAGAAGCTCAAGAGAGACGAGGGGGATGAGGAGGAAGAGGAAGAAGAGG
AGGAGGATGAAGAGGAAGGAGAAGGCGTGGGATACGTGTTCGTCAAGGAC
TACAAATTCAATATTATTCACTACGTGAGTAAGCGAGTTCGATCGATCGA
TGAGATTTTGCGGGTAAAAGCTCTAACACCGGAGCAAGCCGCCCAAGGAG
CTCCAATTCCTTCGTAAGCTGACGAAATGGAATATGGCTGACATCTCGCA
GAACCAAACAAAAAATAAGGCTGCCATCTACCAATCGCGTTGCGGGTGTA
GGGTGTAGAGCCACATGGGGGAAGGAATAAGAAATAACAACCTTGTGCTT
TGTTGGAAAAATAAAATATAAAACACACACACACATATATATATCCCTTG
CTCCGTCTTCACGCCATCGTTTTTTTCCCCAATCTGCTACTGCAGGCACA
GACGCATTACGATGGAAACCCTCATCTTATGTTCATGATCAACCCGGACA
CCAGCGAGGCAACCTACTGCAGGCTCTCCGCCAAGGTGCTCGAAATGGCG
TGTTCTTAGTTCAGGGGCATGCCGGAGTCTGCGTTTCGTATATGATAATA
TAGTATATAAAAGTATAGTAAAGTATAGTATAATATAGTATAGTAAAGAA
GCGCCCGATAAGTGTGCAACAACCCAATGTGTCCAATTAGCTCATGTCAT
GTCATGTCCGGTTCGTCGTATTATAGTAACAAACGCAAGGAGGATGATGG
CAAAAGCTGGTATGAATATCAATATTAAGTTTGTGAAAGGTACTATTAAT
ATTAATATAACCTGACCGGTGAAGACGTGGTATCATATCGCGGTATCATA
TCGATCGCTCCGTCCCGGCATTATCGGGGTGCCTGGTCTGGGACTGTGTG
CCTTTAACAGAAGTAGACCCTCTCCCGTCTTTGTGTATCTCATCGGAAGG
CGGTGTTCGAACACACACACGTATATATATATATATATATATATATATAT
ATATTATAGATGTATATATATACATATTAAAAAGCGAAGATGGTTAGGGT
TTGTAAGGAACCGTTTTGATCACATTCTATTATTGCCCTCCTCCCCCTCT
CTCTCTTTTTCTTTCTGTATCTCTTTAAATCGTCCTCTTTGCCAAGGTGG
AGCTCGCAAACCTGCCGCGGGAGCAGGGGCAGCCGAAAACTGGGCGAGGG
GCGCGAGTGGTGAGTATAGCTTTGGCTCGGTGATAATGAAATGACAGCCT
CAGCCTTAGCCTTGGTTGCTGTACGGAAGGGGGATGGAGAATGAGGCATC
CCCTTGTGTTTTTGGCATTTTTGGTGTCTTTCTGCATGACCGACGATGAC
GATGACTGTATGTCTGTCTACGAAGTTTAAGGGAGCTCGGCGTTTCCAAC
AAGCTTGCGTCGGTGGCTGTCGATGGCTGTAGCCGTAATACCCGCGGACT
GGGAATGATAACTTAAGCTTCTATTATAATTCACAGCAGTGTTTTTTTTT
CGTTCTTTAGTTTAGTTTTTTTTAGAGAGAAGGGAACGGGGGNNNNNNNN
NNGGTTGTGTTTTTTTTGTGTTTTTTTGTTTTTTTGGGTGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGAGGGGTCGTGCTCAGGTTTTGTATTCTTTAG
CTGTTTATACCATTGACTGCGCGTCCTCGGGAGAACGGAGCAAGTTTTGC
ATTTTTTCCTCTAGCTACTCCAATATTACAACCACCTCGAATGTATAGAT
AGTGCTGCTGTATATACTGTATGTCTTTAGTCTATTATAGTATTAATAGT
AGTAAAATGATGGTGGGTGTTATCTTACCGCGCCCGCTGTTTGTGCCTTA
CGGTTAAAACATACAAACGTTCGAGAGGCATTATTTTTTGGTTTGTTGAT
TTATTTATCAATTTGCTTTATTACCTACCGGTACCTGCTTAATTGCTTTA
TTACCTACCGGTACCTACTTAATTGCTTTATTACCTACCTTCTAGTCCCA
TCGAGAGGTCTCGGAAGAAGAGATGATCAACGCCCACAAGAAGATATCGG
CCGACTTGCAGCTGGAGGGCGACTACGATTACTTGGCGGGGTTGGGAGGG
ATACAAGAGAACGGCTACGCGGAGTCGGCGGAGGGGGGGAGTCAGCAGCA
GGGAAACGAGGAGGCGCTGGAGGAGGAAGAAGAAAAGGAGGAGGAGGAAG
GAGAGGAAGGGCTGCGGGAGAACGGCCACGTCGACGGCGAGGTGCGACAA
TCGAGATCGCAGTCGCTCTTCTGCTTGCCGCCTGCTTCACTGTTAAGGAT
AGCTCGCGTCTTTTTTCGTTACCTGTCCAGCTTTGTGAAAAAGAAACTTG
CGACCTTTGATTTTTCTGCGTGTATTAATTTTTATTTAAAAGAATACTGT
ATTAATACTGTATTACCATTTGTGCTCCTCTTTTCGATTCCCGATTGCTC
GGAGGAAATTTGCATCAGGCATCATTTATTTGTTTCACTCCAAGTACATT
GCCATACCATTAGATGGACCGGGCTTTGCTCGTCTTGTCCCTCGCCTCGT
GTGTCTTGTTTTTAGGTTGTGACTGGCCTCGCCTCGTTTGTCGTGTCGTT
TGTGCGTGACTAGCCTCGCCTCGTTTTTTTTTTTTTAGTAAGTAGCTCTC
CTAAATATGTATAGGAAAAAAGCGAAGCTGCTTACCACTTCGCTGATGAC
GAGCCGCTTTTTGTTGTTTTGAAAGGGCGCCGTGAACGGAGATGAGTCTC
GGGCATGGAACGGCAGCGTTTCTGACGGGGAGGGGGAGGACGGGGAGGGG
GAGTACTTGTTGGGCATGGCACTGGAGTCGGAGGCGTCAAACGTTGCCGT
CAAGGTATGTGTGTGGTATGTGTGTATGAGCGGCCCCACTTCTCGACTAT
TAGGAACTAATGGGGGGCGGGTACGAGGTGTTCGGTAATGCATTATTGGG
AAGAAGTTGATCCTCTTATTGCACAGAGAGGTGGTGGAGGGATTGTCCGC
ACACAAATCGCCACTTAAAATATCTGACGCACGCCTACATGGTAGGGGAG
GGTAGGGTAGGGAGTTCGTAGTTTTTTAGCAGGGGAATATATCAATTACT
CGGGGTAAGCTTTTTGTCGAGTTCACTGGTGTTGGAAATGTGGAAATGGA
GCTATCAGTGTTAATAACCTACCGTATAGCTCGGCGATCGTTGTGTTGCG
TTGAAGTTCAAACTAGCAGGAAGGGGGGTCATATTTCCACCCCCCGCCCT
CGTCATCTCTTGTCGTACACAACGTTTGGCAGATAGCCATAACAATGTAT
AGATGCAGCCTCGTAATATATAGTGTGTATAGCCTCGAAGCTAACGCGCG
TTTCCACCGAGTCGCTTTCGCGTCGTCGGTTCTAGGGGGGAGCTTTCAGT
CATCTGAATCGGAAATGAGCGCAGGAGCAGTTTTCCGCATCAGACCATCT
ATGATGTGGAGTTACTCGAGCTCTGGTGTCTGTTTTAAAAAATACAGTAT
ATTTTATTGATTCTCGAATAAAAACTAAACGAAAATGGCTGCGAAGTTTA
TTGACTCGGTGTCATGTCTCCGAGTTCACCCTTCCTCCACTCCCCGATTA
TGTTTAAACGTGGCTGGATGGCATTCGCGGCAGGGGACTGAAAGCTCTGA
GGGAGACATTATCGGCGCCAACACGGACGACAACGATTCGGAGCCGTAAT
GCGAAATCAATATATCAACATACTATTAATAGTATATTGAAAACGAGATC
TCGCTGTCACTCAATCATCCTAGTTCCAAGTGGTGTATTATCTGCCGAGA
GCGCTAGACGGGCAAAGGCGTCAGTTTCATAAAGGCAATGTTGTTTGTGT
TTGCTGTTTGTTGTTGCTGATGTTGAGCGCTCGATGAAGGATTGATGTGA
CAGGGTTGGGGAGGGAGTACTCAAGTTTTTCATACCTCAGCTATTAGACC
TTTCACCGCGCTTCGTAGGGAGGATAGAAGCATGAATCGATGGATGCCGC
GAGATATCGAAAATATATATATAGAAGGGCGACCAGCGGTATCGCTGACT
CCACCCCACGGAGCCATGTACGGGTAAGGGTGCGGATGACTTACTTGAAA
TATGGATAAGTTGGAGACTATGCGCGTACGACACGTAGGGGTATCAAGCA
CGGCCATCGGAAATAGAAGGCGACTCGAATTTATTGCGGCAAGAAGAGAA
AGCGTGGAGACGATCGGCCTGCCACAAGAGGGGTGAATGCGACCTGACAC
CTACTGTAGCTCTCCCAAGATAGA
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Coding sequence (CDS) from alignment at H-elongata_contig8565:59..9432-

>mRNA_H-elongata_contig8565.16149.1 ID=mRNA_H-elongata_contig8565.16149.1|Name=mRNA_H-elongata_contig8565.16149.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3006bp|location=Sequence derived from alignment at H-elongata_contig8565:59..9432- (Himanthalia elongata Himel1 dioecious)
TCGTCCATCCGGAACCACGCGAACGCGCAGCTGCACTACGAGCGAGACCT
AGGGGTGACTATAGATATAATCGATCCCAGAAAATACATTTTACCCCAAA
ACCCGGTGCCCTTGCCGAAGGAAGACGAGGCCCTCTTGAACTGGGAAGAG
GGGGACGTCCCAAGCTCGGTCGTCCATCCGGAACCACGCGAACGCGCAGC
TGCACTACGAGCGAGACCTAGGGGTGACTATAGATATAATCGATCCCAGA
AAATACATTTTACCCCAAAACCCGGTGCCCTTGCCGAAGGAAGACGAGGC
CCTCTTGAACTGGGAAGAGGGGGACGTCCCAAGCTCGGGACGGAGGGAAG
CCCTGTCTACCTCAGCGCGACGCAGGGCGGTTAAGACGTCTGTAACCTGG
CTCAAGAAAACAGTGTATCTTACGAACGACACGTTCGACCCCGTTCACCA
GTTCAAGTCGGAGCAGCAATCTCAGGACGGAGGGAAGCCCTGTCTACCTC
AGCGCGACGCAGGGCGGTTAAGACGTCTGTAACCTGGCTCAAGAAAACAG
TGTATCTTACGAACGACACGTTCGACCCCGTTCACCAGTTCAAGTCGGAG
CAGCAATCTCAGGCTGACAAGCAGTTGGAGCTGGAGAGGGAGATCGCTAG
GGGAGGGAATCAGGACCGTAAGATGCTCAGCGAGGAATCCTTCATGCACG
CCAACAGTCGAAAGCCGGCTGACAAGCAGTTGGAGCTGGAGAGGGAGATC
GCTAGGGGAGGGAATCAGGACCGTAAGATGCTCAGCGAGGAATCCTTCAT
GCACGCCAACAGTCGAAAGCCGCTGGTGCACTCGGATAAGAACAAGAGGC
ATCTGAAGGCGGAGTGGATCATGCCCGTGATGCCGGATGTGTCCCTCTGG
CCGAACACCTACACCACGGTGGCGTTCGACAAAGACCCCGCCGAAGACGA
CGCGGTCAAGGGCTCCAAGCTGGTGCACTCGGATAAGAACAAGAGGCATC
TGAAGGCGGAGTGGATCATGCCCGTGATGCCGGATGTGTCCCTCTGGCCG
AACACCTACACCACGGTGGCGTTCGACAAAGACCCCGCCGAAGACGACGC
GGTCAAGGGCTCCAAGGCGCGCAAGAGAAAGAGGGCGAACGAAGCTCTGG
TTTGCAACGTCAAGCGGACGACGTTCGAGGGCAACTCGAACGAGGCGCGC
AAGAGAAAGAGGGCGAACGAAGCTCTGGTTTGCAACGTCAAGCGGACGAC
GTTCGAGGGCAACTCGAACGAGATAATTACGGGGTCGTACCTGATGCCGA
AAGAAAAGAAGCTCAAGAGAGACGAGGGGGATGAGGAGGAAGAGGAAGAA
GAGGAGGAGGATGAAGAGGAAGGAGAAGGCGTGGGATACGTGTTCGTCAA
GGACTACAAATTCAATATTATTCACTACATAATTACGGGGTCGTACCTGA
TGCCGAAAGAAAAGAAGCTCAAGAGAGACGAGGGGGATGAGGAGGAAGAG
GAAGAAGAGGAGGAGGATGAAGAGGAAGGAGAAGGCGTGGGATACGTGTT
CGTCAAGGACTACAAATTCAATATTATTCACTACGCACAGACGCATTACG
ATGGAAACCCTCATCTTATGTTCATGATCAACCCGGACACCAGCGAGGCA
ACCTACTGCAGGCTCTCCGCCAAGGCACAGACGCATTACGATGGAAACCC
TCATCTTATGTTCATGATCAACCCGGACACCAGCGAGGCAACCTACTGCA
GGCTCTCCGCCAAGGTGGAGCTCGCAAACCTGCCGCGGGAGCAGGGGCAG
CCGAAAACTGGGCGAGGGGCGCGAGTGGTGGAGCTCGCAAACCTGCCGCG
GGAGCAGGGGCAGCCGAAAACTGGGCGAGGGGCGCGAGTGTCCCATCGAG
AGGTCTCGGAAGAAGAGATGATCAACGCCCACAAGAAGATATCGGCCGAC
TTGCAGCTGGAGGGCGACTACGATTACTTGGCGGGGTTGGGAGGGATACA
AGAGAACGGCTACGCGGAGTCGGCGGAGGGGGGGAGTCAGCAGCAGGGAA
ACGAGGAGGCGCTGGAGGAGGAAGAAGAAAAGGAGGAGGAGGAAGGAGAG
GAAGGGCTGCGGGAGAACGGCCACGTCGACGGCGAGTCCCATCGAGAGGT
CTCGGAAGAAGAGATGATCAACGCCCACAAGAAGATATCGGCCGACTTGC
AGCTGGAGGGCGACTACGATTACTTGGCGGGGTTGGGAGGGATACAAGAG
AACGGCTACGCGGAGTCGGCGGAGGGGGGGAGTCAGCAGCAGGGAAACGA
GGAGGCGCTGGAGGAGGAAGAAGAAAAGGAGGAGGAGGAAGGAGAGGAAG
GGCTGCGGGAGAACGGCCACGTCGACGGCGAGATGAGTCTCGGGCATGGA
ACGGCAGCGTTTCTGACGGGGAGGGGGAGGACGGGGAGGGGGAGTACTTG
TTGGGCATGGCACTGGAGTCGGAGGCGTCAAACGTTGCCGTCAAGATGAG
TCTCGGGCATGGAACGGCAGCGTTTCTGACGGGGAGGGGGAGGACGGGGA
GGGGGAGTACTTGTTGGGCATGGCACTGGAGTCGGAGGCGTCAAACGTTG
CCGTCAAGGGGACTGAAAGCTCTGAGGGAGACATTATCGGCGCCAACACG
GACGACAACGATTCGGAGCCGTAATGCGAAATCAATATATCAACATACTA
TTAATAGTATATTGAAAACGAGATCTCGCTGTCACTCAATCATCCTAGTT
CCAAGTGGTGTATTATCTGCCGAGAGCGCTAGACGGGCAAAGGCGTCAGT
TTCATAAGGGACTGAAAGCTCTGAGGGAGACATTATCGGCGCCAACACGG
ACGACAACGATTCGGAGCCGTAATGCGAAATCAATATATCAACATACTAT
TAATAGTATATTGAAAACGAGATCTCGCTGTCACTCAATCATCCTAGTTC
CAAGTGGTGTATTATCTGCCGAGAGCGCTAGACGGGCAAAGGCGTCAGTT
TCATAA
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