mRNA_H-elongata_contig85462.16131.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig85462.16131.1
Unique NamemRNA_H-elongata_contig85462.16131.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A6H5JZ97_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ97_9PHAE)

HSP 1 Score: 391 bits (1004), Expect = 1.770e-126
Identity = 232/417 (55.64%), Postives = 271/417 (64.99%), Query Frame = 1
Query:  247 IAGVARRFDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAGMGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPRLE---TGGSSIKTKASSRILPT-------TKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKPPPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGV-----SGTDVLIEGELPSAVSREDSMWSLIDAKVLVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPFLPGGAL-SGESAAP--GGGGGCLGPDG 1443
            +A V R+FD++LRN+AGQAGSLEALLG FFSFLH+NTDFYVT+DP KT +AGMGFP GKAE+LL++AFRSFP+K Y  +  Q P       G S+ K  A+++I P            +D   G  G +                                E S   S+        PT+  G       AA G + VRYT+DGKQVPIGNGGVT  YYWTQT+ EATVYVDVPPGTRSKDV+CIIQPR LKL VRGAG+A                     DV+ +GELPSAVSREDSMWSL D K +VISFEK T+SWWKSVVEGDPEIDT++VDST +I E+D ETQ  IRKIMFDQRQK+LGLPTSDEL+ADA+ E+AK LPGSPFLPGG L  G+  A   GGGG  LGPDG
Sbjct:    1 MAEVGRKFDDVLRNLAGQAGSLEALLGAFFSFLHRNTDFYVTFDPTKTARAGMGFPAGKAEKLLLRAFRSFPYKSYGVQDEQLPAAAGRGRGPSTAKETAATKIGPAGGSTSRKNDTGVDTALGSGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGEGSVAPSSXXXXXXXXPTTANGKP-----AAAGCISVRYTEDGKQVPIGNGGVTDRYYWTQTVNEATVYVDVPPGTRSKDVTCIIQPRWLKLKVRGAGTAXXXXXXXXXXXXXXXXXXGAEDVVFDGELPSAVSREDSMWSLNDGKTVVISFEKTTKSWWKSVVEGDPEIDTSKVDSTTKISEYDGETQGAIRKIMFDQRQKSLGLPTSDELNADALLERAKVLPGSPFLPGGVLFEGDCGAGVVGGGGDGLGPDG 412          
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A7S3XL32_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL32_HETAK)

HSP 1 Score: 253 bits (647), Expect = 2.510e-74
Identity = 152/381 (39.90%), Postives = 208/381 (54.59%), Query Frame = 1
Query:  268 FDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAGMGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPRLETGGSSIKTKASSRILPTTKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPR--KPPPRPELSPLSSNSMNPDE--TPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSLIDAKVLVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPFLPGGALSGE 1398
            +D +L  +AGQ G ++ LL  FFSFLH+ TDFYV +      +A MGF  G AE++L+++FR FP+KP                                                   PA +    +     I D +  K P  P  +    N+ +  +  T P  VP S  P       G+ VRYT +G Q+PIGNGG+T  YYWTQT+GE T+YVD+P GTR+KD+   I P  +K+ ++                    ++ +IEGE P   +  +SMW+L D + LVI+ EK T++WW+SV++GDPEID  +VDST ++ ++DEETQATIRKIMFDQ+QKALGLPTS+EL    I E+AK   GSPFLPGGA  G+
Sbjct:    9 YDNVLLGLAGQCGGIQPLLAAFFSFLHRKTDFYVVHADDDN-QAKMGFRAGAAEKILLQSFRKFPYKPMPXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXPADKAAPVQHEPDDINDSQEQKKPDGPSAAAAHENAGDQLQRGTAPAPVPASSGP-------GLEVRYTDEGLQIPIGNGGITENYYWTQTLGEVTLYVDIPAGTRAKDLQVEISPSSIKIKLKAE------------------SEAIIEGEFPHTANASESMWTLEDNRTLVITLEKVTQTWWRSVIKGDPEIDAQKVDSTTKVEDYDEETQATIRKIMFDQKQKALGLPTSEELKMQGILEQAKYAKGSPFLPGGAYEGQ 353          
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A7S2SV46_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV46_9STRA)

HSP 1 Score: 247 bits (630), Expect = 6.120e-72
Identity = 151/379 (39.84%), Postives = 206/379 (54.35%), Query Frame = 1
Query:  271 DEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAGMGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPRLETGGSSIKTKASSRILPTTKP-----SIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKPPPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSLIDAKV-----LVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPFLP 1377
            DE+L ++A + G +E LLG FFSFLH+ TDFYV YDP    +A MGFP G +E++L++ FRSFP K Y    ++  RLE     ++  A  ++ P+++       +      P E                     T PD             SS+   P     T  P    P+         V+YT  GKQVPIGNGGVT  Y WTQT+ E TVY+ VP GTR+ D+ C I P++L+L ++                     + +++G++P  V  ++SMW + D        +VI+ +K  ++WW  VV GDP ID T VDST +I E+D ETQ  IRKIMFDQ+QK+LGLPTSDEL+ +AI EKAK +PGSPFLP
Sbjct:   14 DELLMSLASKLGGIEPLLGTFFSFLHRKTDFYVQYDPKSVPQARMGFPAGVSEKMLLRKFRSFPTKDY---AAEVARLEEA-QGLRRPAGPKLRPSSEARRAAQKVPVAPSEPMEVAAXXXXXXXXXXXXXXARTVTGPD------------ASSSQAGPAAG--TPAPKMPFPE---------VKYTDKGKQVPIGNGGVTSRYTWTQTLYEVTVYIPVPQGTRAADILCTIAPKKLQLKLK------------------KEPEWILDGDMPETVRPDESMWVVEDDPAGDFGTVVITLDKIKKTWWDVVVVGDPAIDATMVDSTCKIDEYDPETQGAIRKIMFDQKQKSLGLPTSDELTTEAILEKAKYMPGSPFLP 347          
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A7R9U371_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U371_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.550e-64
Identity = 135/382 (35.34%), Postives = 207/382 (54.19%), Query Frame = 1
Query:  265 RFDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAGMGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPR------LETGGSSIKTKASSRILPTTKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKPPPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSLIDAKVLVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPFLPGGALS 1392
            RFD++  ++A Q+  +E +L + F FLH+ TDFYV  + A+ + A MGF  G+AE++L++ F+SF FKP    Q +  R       +    + K+KA S +  + + +         +     T+  +V K++         + + P  +PE            E  P+                  ++  +DGKQ+P+ NGG T  Y W+QT+GEAT++V +P G R++D+   I P  L +  +                  +  DV++ G+ P  +  ++S+W+ +D  +L IS +KA R+WW S + GD EIDTTQVDS  +I ++D+ETQ  IRKIMFDQ+QKALGLPTSDEL    +FE+AK  PGSPFLPGG  +
Sbjct:    6 RFDDVFLSLASQSDGIEGMLRIVFDFLHRRTDFYVVKE-ARDLSARMGFNDGEAERILLRTFKSFAFKPLSAAQQKTVRKKKNKIAKRSSEAAKSKAPSPVAASPQEAAASHTATVEDELPGPTEHQSVPKMDGAAGALEERESKDPATKPE------------EVRPS------------------LKVNEDGKQIPVNNGGATDKYVWSQTLGEATMHVPLPEGMRARDIRVEILPSGLTVRKK------------------ADDDVILAGQWPRRIQGDESVWT-VDNGILTISLDKADRAWWSSALVGDVEIDTTQVDSRTKIDDYDDETQGVIRKIMFDQKQKALGLPTSDELEKQELFERAKFAPGSPFLPGGPFA 337          
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A7S3H6E3_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6E3_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.020e-59
Identity = 137/378 (36.24%), Postives = 188/378 (49.74%), Query Frame = 1
Query:  268 FDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAG--MGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPRLETGGSSIKTKASSRILPTTKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKPPPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVR---YTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSL---IDAKV--LVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPF 1371
            FD+ML ++A +AG ++ LL  FFSFL + TDFYV +D     KA   MGFP G AE+++++AFR +  + Y+                    + +  P T PS   T  +P  S   +   P+                                     TPP    GS                  YT DGKQ PIGNGG+   YYWTQT+ + TVY+D   G R KDV C I+ + LK+A+RG                    +V+++G L   V  ++SMW++    D+ +  +VI+ EK   +WWK V+ G  EIDTT+VDST  IGE+D+ TQA IRKIMFDQ+QK LG PTS+E + DA+  KA  +PGSP 
Sbjct:   19 FDDMLTHIASKAGGIKPLLDTFFSFLERKTDFYVQFDQPAAGKASYKMGFPKGVAEKMVLQAFRQYKLQDYET----------------VMGNQKEQPATLPSPPQTPSKPTASEHLTPAAPS-------------------------------------TPPKMSSGSXXXXXXXXXXXXXXXXXXYTPDGKQYPIGNGGIGENYYWTQTLRDVTVYIDTAAGCRGKDVKCDIKAQALKVAIRG--------------------EVVVDGALEGVVKTQESMWTISTTTDSAIQQIVITLEKTRPTWWKHVISGHEEIDTTKVDSTQNIGEYDDNTQAAIRKIMFDQKQKLLGQPTSEESAMDALLAKASLVPGSPI 323          
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A2D4C6K1_PYTIN (CS domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6K1_PYTIN)

HSP 1 Score: 192 bits (487), Expect = 6.940e-52
Identity = 124/369 (33.60%), Postives = 175/369 (47.43%), Query Frame = 1
Query:  265 RFDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAGMGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPRLETGGSSIKTKASSRILPTTKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKPPPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSLIDAKVLVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPF 1371
            R DE+L ++A Q  S+E+LL  FF FLH+ TDFYV    A  V   MGF  G A++ +++AF  +P +  D     A R                                 + +  TQ P                                                            V+ T  GKQ+PIGNGG+T  Y WTQT+ + TV V VP GT +K + C I+P+RL++AVR          ++S  +  + + VL++GE P  +  ++S+WSL +   L +S EK  ++WW SV+ GD EIDT++VDST  IGE+D  TQ  IRK MFDQ+Q+ LGLPTS+EL+   +  KA+  P SP 
Sbjct:   16 RHDELLLSLAQQHSSIESLLDSFFDFLHRKTDFYVV--SADPVSRRMGFRPGDAQRKVLEAFGKYPLRDVDAEAPVASRXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXAPMQQTQAP------------------------------------------------------------VKLTDKGKQLPIGNGGITDKYTWTQTLEDVTVLVPVPEGTSAKQIECDIRPQRLRVAVR----------SSSTHSTKNPSVVLLDGEFPEKIRADESLWSLENGHTLELSLEKIRQTWWASVLRGDAEIDTSEVDSTRAIGEYDAATQGAIRKAMFDQQQRQLGLPTSEELATQELLAKARLAPNSPI 310          
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A835Z5P8_9STRA (Nuclear migration protein nudC-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P8_9STRA)

HSP 1 Score: 177 bits (450), Expect = 3.780e-47
Identity = 101/200 (50.50%), Postives = 132/200 (66.00%), Query Frame = 1
Query:  829 KQVPIGNGGVTPV--YYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELP-SAVSREDSMWSL-IDAKVLVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPFLPGGALSGESAAPGG 1416
            KQ P+GNGG  P   Y WTQT+ E TVYVDVP GTR +D+ C I  R L   ++GAG    G  A+               E+P +A++   S+W+L  D  VLV++ EK  ++WW   +EG PEIDT++VDST ++G++DE+TQA IRKIMFDQ+QK +GLPTSDEL+A  + EKAK  PGSPF+PGG L+    APGG
Sbjct:   89 KQTPVGNGGACPDHGYCWTQTLQEVTVYVDVPKGTRGRDMVCDIGTRSLSCKLKGAG----GQQASK--------------EIPFTALAARRSLWNLDSDDGVLVVTLEKVAKTWWACALEGHPEIDTSKVDSTCKVGDYDEDTQAAIRKIMFDQKQKRMGLPTSDELTASDLLEKAKLAPGSPFMPGGPLA---DAPGG 267          
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A6S8EVI0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EVI0_9STRA)

HSP 1 Score: 174 bits (440), Expect = 5.240e-46
Identity = 90/191 (47.12%), Postives = 120/191 (62.83%), Query Frame = 1
Query:  811 RYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPS--AVSREDSMWSLIDAK-VLVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPFL 1374
            RY KDGKQVP GNGG    YYW Q++ E T+YV VPPGT SKD+ C I P  +++                   GV G  +++EG  P    V+  +  WS  +A+  + IS +K  ++WW SVV+G+PEIDT  VDS  ++ E+D+ETQATIR+IMFDQ QK  GLPTS E++ + + EKAK + GSPFL
Sbjct:   71 RYNKDGKQVPEGNGGKGENYYWQQSLYEITIYVQVPPGTNSKDIVCEIDPGTIRV-------------------GVKGKSLILEGNYPENYKVNTGECFWSFEEAENTITISLDKREQTWWPSVVQGEPEIDTQNVDSKRKVDEYDDETQATIRRIMFDQNQKRKGLPTSGEITTNGVLEKAKYIKGSPFL 242          
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A7S4FC07_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FC07_CHRCT)

HSP 1 Score: 172 bits (437), Expect = 2.590e-44
Identity = 126/382 (32.98%), Postives = 187/382 (48.95%), Query Frame = 1
Query:  247 IAGVARRFDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAGMGFPVGKAEQLLIKAFRSFPF---KPYDERQSQAPRLETGGSSIKTKASSRILPTTKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKPPPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSLIDAKV----LVISFEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPF 1371
            ++GV  ++DE+L N+AGQ G ++ L  V FSFL++ TDF+    P       MGF  G AE++L+ AF  +     K   E Q  + R ++ G+++K                D+ G P +   SS+Q     + +   +  ++              +++  + P ET       +  P + +AP    V +   G  VP  NGG T  Y W QT+ + T+ V VP GTR+KD+ C+I   +L L +RG   A        +       D     E+   V  ++  W+L  A      + +  EK    WWKS +EGD EIDTT+VDST  + E+D ETQ  IRKIMFD+ QK  GLPTSDE+  + +  KA +  GSPF
Sbjct:    1 MSGV-EKYDEVLMNVAGQCGGIQPLFDVIFSFLYRKTDFFHIMQPGDN----MGFSEGVAEKILLSAFHKYQKHAEKARQELQRDSTRRQSPGAAVKPV--------------DSEGTPKKEQQSSSQKSDQSRPDTTQSKESV--------------VATAPVQPPET------AASEPKAASAPA-ASVPHLATGADVPY-NGGKTDRYTWEQTLHDVTIQVPVPEGTRAKDIICVISKSKLHLKIRGQPDA--------IIDKSYPCDARNGKEIWEKVRVDECTWALEQAGSGRPRVSVYLEKERECWWKSALEGDQEIDTTKVDSTRSLYEYDGETQGAIRKIMFDEEQKRKGLPTSDEIQNEDLLRKAWDAEGSPF 333          
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Match: A0A8J2SCW8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCW8_9STRA)

HSP 1 Score: 170 bits (431), Expect = 6.270e-44
Identity = 124/377 (32.89%), Postives = 175/377 (46.42%), Query Frame = 1
Query:  262 RRFDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAKTVKAGMGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPRLETGGSSIKTKASSRILPTTKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKPPPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQVPIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRGAGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSLI----DAKVLVISFEKATRSWWKSVVEGDP---EIDTTQVDSTARIGEFDEETQATIRKIMFDQRQKALGLPTSDELSADAIFEKAKNLPGSPF 1371
            +  D++    A +AG ++ LL  FF FLH+ TDFY+ +   K      GF  G+AE ++  AF + P +P +            GS+++  A+                    ++ +  +   VE+   R A                                   G+D    G       VRYT DG Q+P+GNGG+   + WTQT+ E TV +DVP  T++KDV+C I  R L L +      AGGA             V + G     +    S W+L     D   LV++ EK   +WW+SV +  P   +ID  +VDST R+ E+DE+TQA IRK MFDQRQ+  GLPTS+E   D+I E AKNLP SPF
Sbjct:    5 QELDQIFLAAAERAGGIQPLLTSFFGFLHRRTDFYIEHGGVKGRAYDAGFAPGQAEAMVRAAFMAHPTRPLE------------GSNVERSAA--------------------AHRAGCEATLVERARDRKAXXXXXXXXX-----------------------XARGADGRYDG-------VRYTDDGVQIPVGNGGIAATHSWTQTLYETTVTIDVPAATKAKDVACKISARGLTLDI------AGGA-------------VSLAGNWYDVIDAGASCWTLDRPGRDRACLVLTLEKTQETWWRSVFKDAPKADQIDAQKVDSTKRMDEYDEKTQAGIRKCMFDQRQRRRGLPTSEESQVDSILESAKNLPNSPF 300          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85462.16131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ97_9PHAE1.770e-12655.64CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S3XL32_HETAK2.510e-7439.90Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2SV46_9STRA6.120e-7239.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9U371_9STRA1.550e-6435.34Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3H6E3_9STRA1.020e-5936.24Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A2D4C6K1_PYTIN6.940e-5233.60CS domain-containing protein n=2 Tax=Pythium insid... [more]
A0A835Z5P8_9STRA3.780e-4750.50Nuclear migration protein nudC-like protein n=1 Ta... [more]
A0A6S8EVI0_9STRA5.240e-4647.12Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S4FC07_CHRCT2.590e-4432.98Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A8J2SCW8_9STRA6.270e-4432.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85462contigH-elongata_contig85462:2..2506 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score403.3
Seed ortholog evalue1.4e-109
Seed eggNOG ortholog2880.D8LL35
Preferred nameNUDCD3
KEGG koko:K21867
KEGG TC1.A.1.4
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005856,GO:0005868,GO:0005875,GO:0006457,GO:0006810,GO:0006996,GO:0007097,GO:0008104,GO:0008150,GO:0009987,GO:0012505,GO:0015630,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030286,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044380,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044782,GO:0046907,GO:0051082,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051647,GO:0051649,GO:0051656,GO:0060271,GO:0070727,GO:0070925,GO:0071539,GO:0071840,GO:0072698,GO:0120031,GO:0120036,GO:1902494,GO:1905508,GO:1905793
EggNOG free text desc.unfolded protein binding
EggNOG OGsKOG2265@1,KOG2265@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHSP20-like chaperone
Ec32 orthologEc-26_003380.1
Exons2
Model size2138
Cds size1230
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85462.16131.1prot_H-elongata_contig85462.16131.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig85462 673..2269 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931257.5474043-UTR-H-elongata_contig85462:1..6721622931257.5474043-UTR-H-elongata_contig85462:1..672Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig85462 2..672 -
1691679762.5523033-UTR-H-elongata_contig85462:1..6721691679762.5523033-UTR-H-elongata_contig85462:1..672Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig85462 2..672 -
1622931257.5963943-UTR-H-elongata_contig85462:2269..25061622931257.5963943-UTR-H-elongata_contig85462:2269..2506Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig85462 2270..2506 -
1691679762.5985317-UTR-H-elongata_contig85462:2269..25061691679762.5985317-UTR-H-elongata_contig85462:2269..2506Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig85462 2270..2506 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931257.5666678-CDS-H-elongata_contig85462:672..9331622931257.5666678-CDS-H-elongata_contig85462:672..933Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85462 673..933 -
1691679762.570092-CDS-H-elongata_contig85462:672..9331691679762.570092-CDS-H-elongata_contig85462:672..933Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85462 673..933 -
1622931257.5836723-CDS-H-elongata_contig85462:1300..22691622931257.5836723-CDS-H-elongata_contig85462:1300..2269Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85462 1301..2269 -
1691679762.5862489-CDS-H-elongata_contig85462:1300..22691691679762.5862489-CDS-H-elongata_contig85462:1300..2269Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85462 1301..2269 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig85462.16131.1

>prot_H-elongata_contig85462.16131.1 ID=prot_H-elongata_contig85462.16131.1|Name=mRNA_H-elongata_contig85462.16131.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=410bp
MTDIAGVARRFDEMLRNMAGQAGSLEALLGVFFSFLHKNTDFYVTYDPAK
TVKAGMGFPVGKAEQLLIKAFRSFPFKPYDERQSQAPRLETGGSSIKTKA
SSRILPTTKPSIDDTRGRPGESNLSSTQGPAVEKIEPRVAVTTIPDPRKP
PPRPELSPLSSNSMNPDETPPTSVPGSDTPDSGAAPGGVRVRYTKDGKQV
PIGNGGVTPVYYWTQTIGEATVYVDVPPGTRSKDVSCIIQPRRLKLAVRG
AGSAAGGAAAASVATGVSGTDVLIEGELPSAVSREDSMWSLIDAKVLVIS
FEKATRSWWKSVVEGDPEIDTTQVDSTARIGEFDEETQATIRKIMFDQRQ
KALGLPTSDELSADAIFEKAKNLPGSPFLPGGALSGESAAPGGGGGCLGP
DGEERDLDT*
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mRNA from alignment at H-elongata_contig85462:2..2506-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig85462.16131.1 ID=mRNA_H-elongata_contig85462.16131.1|Name=mRNA_H-elongata_contig85462.16131.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2505bp|location=Sequence derived from alignment at H-elongata_contig85462:2..2506- (Himanthalia elongata Himel1 dioecious)
CCGCCCTTTTACCTTGTTAGGCAAGCGCACTACCTGGAGGTCGCTCAAAT CCATCAATTTTCTTCGAATTACTCGAGGATTGATGAGCTAGAGAGTAGTG TACTCTTCGTTTAGGCACACGAAGTGCACAAAAATAGCCAGAAACTTTGA GGTGGACCCCGCAGCAATCGGCTGAAAGCCTCAGCACTGTGATTAGCTTG GGATAGACGAGGCGAGGGCAACTGTGACTTTGACAAAATGACGGATATCG CTGGCGTTGCTCGAAGATTTGACGAAATGCTGAGGAACATGGCGGGCCAG GCGGGTTCTCTGGAGGCTCTCCTCGGCGTGTTCTTCTCTTTTCTTCACAA AAACACCGACTTCTACGTTACCTACGATCCTGCCAAAACCGTTAAGGCTG GAATGGGATTCCCTGTAGGCAAGGCAGAGCAGTTGCTGATCAAAGCGTTT CGTTCGTTCCCCTTCAAGCCATACGACGAAAGACAATCACAAGCGCCGAG ACTGGAAACAGGAGGTTCAAGTATAAAGACGAAGGCTTCGTCTAGGATTT TACCCACCACGAAGCCGTCCATCGATGACACCCGTGGCCGACCGGGTGAG TCCAACTTGAGCTCGACTCAGGGTCCGGCGGTTGAGAAAATAGAGCCTAG GGTAGCCGTTACGACAATACCTGACCCGCGGAAGCCGCCTCCACGCCCTG AGTTGTCGCCGCTATCATCCAATTCAATGAACCCGGACGAGACTCCTCCT ACAAGTGTGCCAGGATCTGACACTCCGGATTCTGGGGCTGCACCTGGAGG AGTTCGAGTGCGCTACACAAAGGACGGTAAACAAGTCCCAATAGGCAACG GCGGAGTGACTCCAGTATACTACTGGACTCAGACCATCGGCGAGGCTACA GTTTACGTCGACGTTCCCCCGGGGACTCGGTCAAAAGACGTGTCATGTAT CATCCAGCCGCGGAGGTTGAAACTCGCCGTCAGGGGCGCGGGGAGTGCAG CGGGAGGGGCGGCAGCAGCGTCGGTAGCGACGGGAGTAAGTGGGACAGAC GTCTTGATCGAGGGGGAGCTCCCTAGCGCAGTTTCCAGAGAAGATAGCAT GTGGAGCCTGATCGATGCGAAAGTGCTTGTGATCTCGTTCGAGAAGGCGA CTAGGTCGTGGTGGAAGAGCGTGGTGGAGGGCGACCCGGAGATAGACACA ACCCAGGTGATCAACATGGATTACCTCACCGTTGTCTACGAATTGCATGG ATTAGTGCCGCAGTGTCTATATGCAGTTGTACGTCCGCACACCAATTTGT TTTGGCGAACAGAAGCTCTCACATAGGGTCGAGAGCACTACCATAACTTC ATATTTTTCTTCGCCGTTGACGTCGGTGGCGTGGATGATCTGTGTCACGA TCGGCGAAAGAGCTGAGACCAAGCCCTCCCAGTCCATAAATCGGGCGGGA GGGTTGTAGAGATCCGTCGAGGTGTTCAAAACAAGGCAGGCTCGCTCGTC CGTAATTATGCCGGAACCCTCATCGCCTTCACTCGTGATCCGCCGGCCGA ACTCCATGAACGGGATAAAATAGGTAGACTCGACGGCCAGGATCGGCGAG TTCGACGAGGAGACCCAGGCCACGATCCGCAAGATCATGTTCGACCAGCG CCAGAAGGCCCTCGGGCTTCCCACCAGCGATGAGCTCTCGGCAGATGCTA TTTTCGAAAAGGCGAAGAACTTACCGGGTAGTCCGTTCCTCCCGGGGGGT GCCTTATCCGGCGAGAGCGCCGCGCCCGGCGGCGGCGGCGGCTGCTTGGG CCCAGATGGCGAGGAGCGTGACCTCGACACATGACGCGAAGCACCTTTTT TACGCAAGGAAAAATGTAGTTGTGGTAAGCGGCCGCCAAAGCTTTCAACA TGAAAAAAATATGTGATTTTTGCCCCCCACCCACCCCCTTTCCCGAGGAG TAGTTTAGTAGGGTAGAGTAGGATATAGAGAGCTAGATACCTTCGTATTA GGATATAATATATAACTTCTACAGTAGGACAGACAAAAGTCGCAACCCGC TAAGAGGAGGGGCTATTTGTCTCGTTCAAGGTAATATATAAATATATACT ATTTATGTGTAGCCAGTGCTTTTCTCAAGGCAAGATATCTCTATGTATAT ACGACTGTAATCGCATGATACGCCGTTCAGCAGTTTTACGCCGTATACAG TTTAGGGGGGGAAAGCGAGATGCGTGTTTGGCTCATTGTCTCCCTCTGTG TCGTATAGCTGGACAAGCTATTGTAAATCATGGAAGGACACCCAGTCAGT TCCCTCCGAAATTGCATATCCACATGATGGTAACCTCCGCGTCACGTGCC TCAACGTACCCTTCCCGGTTTGTAGACCGCCTTGGAGTCCTCCTCCTCCT GGGAGATGCGTACAACTTCGCTTGGCCTCTTTTTTTTCCCTTATAGGGCT CAGACTGTGAGGAACTTTCATTTAGTTTCAAGAAAACTCGCCCCTCTGAA ACCTG
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Coding sequence (CDS) from alignment at H-elongata_contig85462:2..2506-

>mRNA_H-elongata_contig85462.16131.1 ID=mRNA_H-elongata_contig85462.16131.1|Name=mRNA_H-elongata_contig85462.16131.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2460bp|location=Sequence derived from alignment at H-elongata_contig85462:2..2506- (Himanthalia elongata Himel1 dioecious)
ATGACGGATATCGCTGGCGTTGCTCGAAGATTTGACGAAATGCTGAGGAA
CATGGCGGGCCAGGCGGGTTCTCTGGAGGCTCTCCTCGGCGTGTTCTTCT
CTTTTCTTCACAAAAACACCGACTTCTACGTTACCTACGATCCTGCCAAA
ACCGTTAAGGCTGGAATGGGATTCCCTGTAGGCAAGGCAGAGCAGTTGCT
GATCAAAGCGTTTCGTTCGTTCCCCTTCAAGCCATACGACGAAAGACAAT
CACAAGCGCCGAGACTGGAAACAGGAGGTTCAAGTATAAAGACGAAGGCT
TCGTCTAGGATTTTACCCACCACGAAGCCGTCCATCGATGACACCCGTGG
CCGACCGGGTGAGTCCAACTTGAGCTCGACTCAGGGTCCGGCGGTTGAGA
AAATAGAGCCTAGGGTAGCCGTTACGACAATACCTGACCCGCGGAAGCCG
CCTCCACGCCCTGAGTTGTCGCCGCTATCATCCAATTCAATGAACCCGGA
CGAGACTCCTCCTACAAGTGTGCCAGGATCTGACACTCCGGATTCTGGGG
CTGCACCTGGAGGAGTTCGAGTGCGCTACACAAAGGACGGTAAACAAGTC
CCAATAGGCAACGGCGGAGTGACTCCAGTATACTACTGGACTCAGACCAT
CGGCGAGGCTACAGTTTACGTCGACGTTCCCCCGGGGACTCGGTCAAAAG
ACGTGTCATGTATCATCCAGCCGCGGAGGTTGAAACTCGCCGTCAGGGGC
GCGGGGAGTGCAGCGGGAGGGGCGGCAGCAGCGTCGGTAGCGACGGGAGT
AAGTGGGACAGACGTCTTGATCGAGGGGGAGCTCCCTAGCGCAGTTTCCA
GAGAAGATAGCATGTGGAGCCTGATCGATGCGAAAGTGCTTGTGATCTCG
TTCGAGAAGGCGACTAGGTCGTGGTGGAAGAGCGTGGTGGAGGGCGACCC
GGAGATAGACACAACCCAGATGACGGATATCGCTGGCGTTGCTCGAAGAT
TTGACGAAATGCTGAGGAACATGGCGGGCCAGGCGGGTTCTCTGGAGGCT
CTCCTCGGCGTGTTCTTCTCTTTTCTTCACAAAAACACCGACTTCTACGT
TACCTACGATCCTGCCAAAACCGTTAAGGCTGGAATGGGATTCCCTGTAG
GCAAGGCAGAGCAGTTGCTGATCAAAGCGTTTCGTTCGTTCCCCTTCAAG
CCATACGACGAAAGACAATCACAAGCGCCGAGACTGGAAACAGGAGGTTC
AAGTATAAAGACGAAGGCTTCGTCTAGGATTTTACCCACCACGAAGCCGT
CCATCGATGACACCCGTGGCCGACCGGGTGAGTCCAACTTGAGCTCGACT
CAGGGTCCGGCGGTTGAGAAAATAGAGCCTAGGGTAGCCGTTACGACAAT
ACCTGACCCGCGGAAGCCGCCTCCACGCCCTGAGTTGTCGCCGCTATCAT
CCAATTCAATGAACCCGGACGAGACTCCTCCTACAAGTGTGCCAGGATCT
GACACTCCGGATTCTGGGGCTGCACCTGGAGGAGTTCGAGTGCGCTACAC
AAAGGACGGTAAACAAGTCCCAATAGGCAACGGCGGAGTGACTCCAGTAT
ACTACTGGACTCAGACCATCGGCGAGGCTACAGTTTACGTCGACGTTCCC
CCGGGGACTCGGTCAAAAGACGTGTCATGTATCATCCAGCCGCGGAGGTT
GAAACTCGCCGTCAGGGGCGCGGGGAGTGCAGCGGGAGGGGCGGCAGCAG
CGTCGGTAGCGACGGGAGTAAGTGGGACAGACGTCTTGATCGAGGGGGAG
CTCCCTAGCGCAGTTTCCAGAGAAGATAGCATGTGGAGCCTGATCGATGC
GAAAGTGCTTGTGATCTCGTTCGAGAAGGCGACTAGGTCGTGGTGGAAGA
GCGTGGTGGAGGGCGACCCGGAGATAGACACAACCCAGGTAGACTCGACG
GCCAGGATCGGCGAGTTCGACGAGGAGACCCAGGCCACGATCCGCAAGAT
CATGTTCGACCAGCGCCAGAAGGCCCTCGGGCTTCCCACCAGCGATGAGC
TCTCGGCAGATGCTATTTTCGAAAAGGCGAAGAACTTACCGGGTAGTCCG
TTCCTCCCGGGGGGTGCCTTATCCGGCGAGAGCGCCGCGCCCGGCGGCGG
CGGCGGCTGCTTGGGCCCAGATGGCGAGGAGCGTGACCTCGACACATGAG
TAGACTCGACGGCCAGGATCGGCGAGTTCGACGAGGAGACCCAGGCCACG
ATCCGCAAGATCATGTTCGACCAGCGCCAGAAGGCCCTCGGGCTTCCCAC
CAGCGATGAGCTCTCGGCAGATGCTATTTTCGAAAAGGCGAAGAACTTAC
CGGGTAGTCCGTTCCTCCCGGGGGGTGCCTTATCCGGCGAGAGCGCCGCG
CCCGGCGGCGGCGGCGGCTGCTTGGGCCCAGATGGCGAGGAGCGTGACCT
CGACACATGA
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