mRNA_H-elongata_contig854.16130.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig854.16130.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 116 bits (290), Expect = 4.900e-30 Identity = 55/71 (77.46%), Postives = 62/71 (87.32%), Query Frame = 1
Query: 1 DPLDFLRVRTADFPHLSSLAHHMLVIPATQAEPERLFSCAGNIVTKNRNKLAPATVKLLVLLRHSWGVVEK 213
DPLD+ RVR ADFPHL++LA +L IPATQAE ERLFSCAGNIVTKNRN LAP TV+LLVLLRHSW +VE+
Sbjct: 222 DPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEE 292
BLAST of mRNA_H-elongata_contig854.16130.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.670e-24 Identity = 46/62 (74.19%), Postives = 54/62 (87.10%), Query Frame = 1
Query: 28 TADFPHLSSLAHHMLVIPATQAEPERLFSCAGNIVTKNRNKLAPATVKLLVLLRHSWGVVEK 213
+ DFPHL++LA +L IPATQA+ ERLFSCAGNIVTKNRN LAP TV+LLVLLRHSW +VE+
Sbjct: 151 STDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEE 212
BLAST of mRNA_H-elongata_contig854.16130.1 vs. uniprot
Match: UPI001C9A9669 (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9A9669) HSP 1 Score: 67.4 bits (163), Expect = 1.970e-11 Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 1 DPLDFLRVRTADFPHLSSLAHHMLVIPATQAEPERLFSCAGNIVTKNRNKLAPATVKLLVLLRHSWGVVE 210
+P ++ + RT +P +S +A L IPAT A ER FSCAGNIVTK RN+L P V LV L + ++
Sbjct: 414 NPFEWWKARTNKYPAISEVAKKYLTIPATSAMSERCFSCAGNIVTKKRNRLLPENVNTLVFLSQNKNLIN 483
BLAST of mRNA_H-elongata_contig854.16130.1 vs. uniprot
Match: A0A420IYG9_9PEZI (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Golovinomyces cichoracearum TaxID=62708 RepID=A0A420IYG9_9PEZI) HSP 1 Score: 61.6 bits (148), Expect = 3.500e-10 Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 1 DPLDFLRVRTADFPHLSSLAHHMLVIPATQAEPERLFSCAGNIVTKNRNKLAPATVKLLVLLRHSW 198
DPL + + ++ P L+ LA +L IPAT A ER FS + NI+T+NR +L P TVK L+LL+ SW
Sbjct: 58 DPLLYWKNNSSRLPILAILARRVLAIPATSASIERAFSVSNNIITRNRTRLLPNTVKKLILLK-SW 122
BLAST of mRNA_H-elongata_contig854.16130.1 vs. uniprot
Match: A0A1A7ZCN3_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A7ZCN3_NOTFU) HSP 1 Score: 60.1 bits (144), Expect = 4.040e-10 Identity = 30/68 (44.12%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 1 DPLDFLRVRTADFPHLSSLAHHMLVIPATQAEPERLFSCAGNIVTKNRNKLAPATVKLLVLLRHSWGV 204
+PL + + A FP L+SLA L +PAT ERLFS AGNIV+K R L+P + +L +S V
Sbjct: 32 NPLQWWKSNEARFPSLASLAKSYLCVPATSTPSERLFSSAGNIVSKKRTSLSPEHIDMLTFFHYSTAV 99
BLAST of mRNA_H-elongata_contig854.16130.1 vs. uniprot
Match: UPI00117E5D88 (zinc finger BED domain-containing protein 4-like n=2 Tax=Sphaeramia orbicularis TaxID=375764 RepID=UPI00117E5D88) HSP 1 Score: 61.6 bits (148), Expect = 1.080e-9 Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 1
Query: 1 DPLDFLRVRTADFPHLSSLAHHMLVIPATQAEPERLFSCAGNIVTKNRNKLAPATVKLLVLLRHS 195
DPL + + R FPHL L++ L IPAT ER+FS AG ++TK RN+L P+T + ++ L +
Sbjct: 169 DPLAYWKERAVVFPHLHKLSNKFLCIPATSVPCERVFSKAGEVITKKRNRLHPSTAEKIIFLNKN 233
BLAST of mRNA_H-elongata_contig854.16130.1 vs. uniprot
Match: UPI00076700A3 (zinc finger BED domain-containing protein 4-like n=1 Tax=Dufourea novaeangliae TaxID=178035 RepID=UPI00076700A3) HSP 1 Score: 60.5 bits (145), Expect = 5.460e-9 Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 1 DPLDFLRVRTADFPHLSSLAHHMLVIPATQAEPERLFSCAGNIVTKNRNKLAPATVKLLVLL 186
+PL++ ++ +PHLS LA +L PAT ER+FS AGN+++K RNKL +T+ ++LL
Sbjct: 430 NPLEYWKLNATKYPHLSQLAQKVLCCPATSVPSERMFSKAGNMLSKKRNKLKDSTLNKMLLL 491
BLAST of mRNA_H-elongata_contig854.16130.1 vs. uniprot
Match: UPI00118120C5 (zinc finger BED domain-containing protein 1-like n=2 Tax=Sphaeramia orbicularis TaxID=375764 RepID=UPI00118120C5) HSP 1 Score: 60.1 bits (144), Expect = 7.480e-9 Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 1 DPLDFLRVRTADFPHLSSLAHHMLVIPATQAEPERLFSCAGNIVTKNRNKLAPATVKLLVLLRHS 195
DPL + + R FPHL L++ L IPAT ER+FS AG ++TK RN+L P+T + + L +
Sbjct: 437 DPLAYWKERAVVFPHLHKLSNKFLCIPATSVPCERVFSKAGEVITKKRNRLHPSTAEKRIFLNKN 501
BLAST of mRNA_H-elongata_contig854.16130.1 vs. uniprot
Match: A0A1A8M216_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8M216_9TELE) HSP 1 Score: 57.8 bits (138), Expect = 8.960e-9 Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 1 DPLDFLRVRTADFPHLSSLAHHMLVIPATQAEPERLFSCAGNIVTKNRNKLAPATVKLLVLL 186
DPL + + FP L+ LA+ +L IPAT ERLFS AGNIV+K R L+P V +L L
Sbjct: 78 DPLIWWKANEQRFPTLAKLANSLLCIPATSTPSERLFSAAGNIVSKKRASLSPEHVDMLTFL 139
BLAST of mRNA_H-elongata_contig854.16130.1 vs. uniprot
Match: A0A6J8CHD8_MYTCO (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8CHD8_MYTCO) HSP 1 Score: 59.3 bits (142), Expect = 1.370e-8 Identity = 28/71 (39.44%), Postives = 43/71 (60.56%), Query Frame = 1
Query: 1 DPLDFLRVRTADFPHLSSLAHHMLVIPATQAEPERLFSCAGNIVTKNRNKLAPATVKLLVLLRHSWGVVEK 213
+PL++ + FP LS LA L IPAT ER+FSCAG I TK RN+L+ + + +++L ++ +K
Sbjct: 335 NPLEWWKENNCKFPRLSVLARQYLSIPATSVPSERIFSCAGLIATKLRNRLSSSVIDQIIILNKNYVPEDK 405 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig854.16130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig854.16130.1 >prot_H-elongata_contig854.16130.1 ID=prot_H-elongata_contig854.16130.1|Name=mRNA_H-elongata_contig854.16130.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp DPLDFLRVRTADFPHLSSLAHHMLVIPATQAEPERLFSCAGNIVTKNRNKback to top mRNA from alignment at H-elongata_contig854:10025..10240+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig854.16130.1 ID=mRNA_H-elongata_contig854.16130.1|Name=mRNA_H-elongata_contig854.16130.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=216bp|location=Sequence derived from alignment at H-elongata_contig854:10025..10240+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig854:10025..10240+ >mRNA_H-elongata_contig854.16130.1 ID=mRNA_H-elongata_contig854.16130.1|Name=mRNA_H-elongata_contig854.16130.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=432bp|location=Sequence derived from alignment at H-elongata_contig854:10025..10240+ (Himanthalia elongata Himel1 dioecious)back to top |