mRNA_H-elongata_contig8528.16120.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8528.16120.1 vs. uniprot
Match: D7FTB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB8_ECTSI) HSP 1 Score: 256 bits (654), Expect = 1.490e-75 Identity = 129/150 (86.00%), Postives = 139/150 (92.67%), Query Frame = 1
Query: 1 VVVQRYICNPLLLDAYKFDLRLYILVTSFNKLEAFIYREGFARLSTHRYEMGNIDNHFIHLTNSSIQRLNESGATCDSPLLRASSSEAGGTKTTLSYLWRRLAASGIDVRALWAEICSVVVKSLVCVEGAIPNQPNSFELFGYDILIDER 450
VV+QRYI NPLLLD YKFDLRLY+LVTSFNKLEAFIY+EGFARLSTHRYE G IDN FIHLTNSSIQRLNE+GA DSPL +A +SEAGGTKTTLSYLWRRLAASG+DV ALWAEICSVVVKSLVCVE +IPNQPNSFELFGYD+LID+R
Sbjct: 851 VVLQRYIGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGAIDNRFIHLTNSSIQRLNEAGAARDSPLNQAKTSEAGGTKTTLSYLWRRLAASGVDVGALWAEICSVVVKSLVCVESSIPNQPNSFELFGYDVLIDDR 1000
BLAST of mRNA_H-elongata_contig8528.16120.1 vs. uniprot
Match: A0A6H5L5P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5P9_9PHAE) HSP 1 Score: 230 bits (586), Expect = 4.730e-66 Identity = 117/136 (86.03%), Postives = 126/136 (92.65%), Query Frame = 1
Query: 1 VVVQRYICNPLLLDAYKFDLRLYILVTSFNKLEAFIYREGFARLSTHRYEMGNIDNHFIHLTNSSIQRLNESGATCDSPLLRASSSEAGGTKTTLSYLWRRLAASGIDVRALWAEICSVVVKSLVCVEGAIPNQPN 408
VV+QRYI NPLLLD YKFDLRLY+LVTSFNKLEAFIY+EGFARLSTHRYE G+IDN FIHLTNSSIQRLNE+GA DSPL +A +SEAGGTKTTLSYLWRRLAASG+DV ALWAEICSVVVKSLVCVE +IPNQPN
Sbjct: 1097 VVLQRYIGNPLLLDGYKFDLRLYVLVTSFNKLEAFIYKEGFARLSTHRYEKGDIDNRFIHLTNSSIQRLNEAGAARDSPLNQAKTSEAGGTKTTLSYLWRRLAASGLDVGALWAEICSVVVKSLVCVESSIPNQPN 1232
BLAST of mRNA_H-elongata_contig8528.16120.1 vs. uniprot
Match: A0A835ZHG5_9STRA (Tubulin-tyrosine ligase/Tubulin polyglutamylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHG5_9STRA) HSP 1 Score: 166 bits (419), Expect = 2.380e-47 Identity = 87/150 (58.00%), Postives = 110/150 (73.33%), Query Frame = 1
Query: 1 VVVQRYICNPLLLDAYKFDLRLYILVTSFNKLEAFIYREGFARLSTHRYEMG--NIDNHFIHLTNSSIQRLNESGATCDSPLLRASSSEAGGTKTTLSYLWRRLAASGIDVRALWAEICSVVVKSLVCVEGAIPNQPNSFELFGYDILID 444
VVVQRY+ PLLL YKFDLRLY+LVTSFN LEAF+YREGFAR+ST Y++ + + F+HLTNSSIQ AT DSPLL E GGTK +L+YLW RL + + V LW++I ++VVK+LV E +P QPN+FELFG+D+L+D
Sbjct: 81 VVVQRYVGRPLLLGGYKFDLRLYVLVTSFNPLEAFLYREGFARVSTRAYDVTAEGLRDRFVHLTNSSIQ------ATRDSPLLDGELHETGGTKASLTYLWARLRRARVPVDRLWSDITALVVKALVACEPGVPAQPNAFELFGFDVLVD 224
BLAST of mRNA_H-elongata_contig8528.16120.1 vs. uniprot
Match: W2K3Q9_PHYPR (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=W2K3Q9_PHYPR) HSP 1 Score: 166 bits (420), Expect = 5.720e-47 Identity = 91/155 (58.71%), Postives = 109/155 (70.32%), Query Frame = 1
Query: 1 VVVQRYICNPLLLDAYKFDLRLYILVTSFNKLEAFIYREGFARLSTHRYEMGNIDNHFIHLTNSSIQRLNESGAT-CDSPLL------RASSSEAGGTKTTLSYLWRRLAASGIDVRALWAEICSVVVKSLVCVEGAIPNQPNSFELFGYDILID 444
VV+Q YI P LLD YKFDLRLY+LVTSFN LEAF+Y EGF RL T YE +I N F+HLTNSSIQ+ NE T +P+ AS +AGGTKTTL++LWRRLAA G+DV + I VV+K+L+C E IP Q NSF+L GYDIL+D
Sbjct: 27 VVIQEYIAAPKLLDGYKFDLRLYVLVTSFNPLEAFLYEEGFVRLCTRPYEDSDISNIFVHLTNSSIQKSNEEAITGSTNPIASMKGENEASQKDAGGTKTTLAFLWRRLAAEGVDVEQVKRSIEEVVLKALLCGEDHIPFQVNSFDLLGYDILLD 181
BLAST of mRNA_H-elongata_contig8528.16120.1 vs. uniprot
Match: K3W656_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W656_GLOUD) HSP 1 Score: 173 bits (439), Expect = 2.620e-46 Identity = 89/150 (59.33%), Postives = 111/150 (74.00%), Query Frame = 1
Query: 1 VVVQRYICNPLLLDAYKFDLRLYILVTSFNKLEAFIYREGFARLSTHRYEMGNIDNHFIHLTNSSIQRLNESGA-TCDSPLLRASSSEAGGTKTTLSYLWRRLAASGIDVRALWAEICSVVVKSLVCVEGAIPNQPNSFELFGYDILIDE 447
VV+Q YI NPLLLD YKFDLRLY+LVTSFN LEAF Y EGF R+ T +YE ++ N F+HLTNSSIQ+ N+ T ++P+ A+ E GGTK TL+YLWRRL A G DV + EI V++KSL+C E IP Q NSF+L+GYDIL+D+
Sbjct: 856 VVIQEYIANPLLLDGYKFDLRLYVLVTSFNPLEAFFYDEGFVRMCTRQYEDSDLSNLFVHLTNSSIQKENQEAIKTSNNPINAAAGEEVGGTKMTLAYLWRRLEAMGADVEKVKNEIIEVILKSLMCGEDHIPFQVNSFDLYGYDILLDD 1005
BLAST of mRNA_H-elongata_contig8528.16120.1 vs. uniprot
Match: A0A482QX04_9EURY (Uncharacterized protein (Fragment) n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A482QX04_9EURY) HSP 1 Score: 166 bits (420), Expect = 4.140e-46 Identity = 83/149 (55.70%), Postives = 111/149 (74.50%), Query Frame = 1
Query: 4 VVQRYICNPLLLDAYKFDLRLYILVTSFNKLEAFIYREGFARLSTHRY--EMGNIDNHFIHLTNSSIQRLNESGATCDSPLLRASSSEAGGTKTTLSYLWRRLAASGIDVRALWAEICSVVVKSLVCVEGAIPNQPNSFELFGYDILID 444
++Q+YI NPLLLD YKFDLRLY+LVTSF LEAFIY+ GFAR+S+ + + I++ FIHLTNSS+QR +++ + S L A ++ GGTK +L YLW+RL G+D +W I +VV+SLVCV+ IP+QPNSFE+FGYD+LID
Sbjct: 192 IIQKYISNPLLLDGYKFDLRLYVLVTSFAPLEAFIYKRGFARISSRPFTNDPSQINDLFIHLTNSSVQRHSDTAQSSISALPGADATTVGGTKCSLEYLWKRLRDRGVDTDQVWESIIDLVVRSLVCVDDVIPHQPNSFEVFGYDVLID 340
BLAST of mRNA_H-elongata_contig8528.16120.1 vs. uniprot
Match: A0A2R5GQD2_9STRA (Tubulin polyglutamylase TTLL5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQD2_9STRA) HSP 1 Score: 171 bits (434), Expect = 7.160e-46 Identity = 87/156 (55.77%), Postives = 114/156 (73.08%), Query Frame = 1
Query: 1 VVVQRYICNPLLLDAYKFDLRLYILVTSFNKLEAFIYREGFARLSTHRYEMGNIDNH--FIHLTNSSIQRLNESGATCDSPLL-----RASSSEAGGTKTTLSYLWRRLAASGIDVRALWAEICSVVVKSLVCVEGAIPNQPNSFELFGYDILIDE 447
V++QRY+ NP+LLD YKFDLR+Y+LVTSF LEA+IY EGF R+ TH+Y +ID H FIHLTNSSIQ++ +GA + +A EAGGTK +LSYLWRRL A G+DV + + I +++KSLVC + ++ N PNSFELFGYD+L+DE
Sbjct: 578 VIIQRYVSNPMLLDGYKFDLRIYVLVTSFQPLEAWIYDEGFVRVCTHKYSSASIDIHNLFIHLTNSSIQKMGPNGAGTKATAASISRHQAEIDEAGGTKLSLSYLWRRLGAQGLDVEKIQSAIKQLILKSLVCCDQSMDNDPNSFELFGYDVLLDE 733
BLAST of mRNA_H-elongata_contig8528.16120.1 vs. uniprot
Match: A0A5D6XLJ8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLJ8_9STRA) HSP 1 Score: 172 bits (435), Expect = 9.490e-46 Identity = 89/150 (59.33%), Postives = 112/150 (74.67%), Query Frame = 1
Query: 1 VVVQRYICNPLLLDAYKFDLRLYILVTSFNKLEAFIYREGFARLSTHRYEMGNIDNHFIHLTNSSIQRLNESGA-TCDSPLLRASSSEAGGTKTTLSYLWRRLAASGIDVRALWAEICSVVVKSLVCVEGAIPNQPNSFELFGYDILIDE 447
VV+Q YI NPLLLD YKFDLRLY+LVTSFN LEAF Y EGF R+ T +YE ++ N F+HLTNSSIQ+ N+ + D+P+ A+ EAGGTK TL+YLW+RL A G DV + +I VV+KSL+C E IP Q NSF+L+GYDIL+D+
Sbjct: 914 VVIQEYIANPLLLDGYKFDLRLYVLVTSFNPLEAFFYDEGFVRICTRQYEDTDLSNLFVHLTNSSIQKENQDAIESSDNPINAAAGEEAGGTKMTLAYLWKRLEAMGADVAKVRRDIDDVVLKSLLCGEDHIPFQVNSFDLYGYDILLDD 1063
BLAST of mRNA_H-elongata_contig8528.16120.1 vs. uniprot
Match: A0A024TG46_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TG46_9STRA) HSP 1 Score: 171 bits (432), Expect = 2.300e-45 Identity = 90/152 (59.21%), Postives = 113/152 (74.34%), Query Frame = 1
Query: 1 VVVQRYICNPLLLDAYKFDLRLYILVTSFNKLEAFIYREGFARLSTHRYEMGNID--NHFIHLTNSSIQRLNESGATCDSPLLRASSSEAGGTKTTLSYLWRRLAASGIDVRALWAEICSVVVKSLVCVEGAIPNQPNSFELFGYDILIDER 450
VVVQ+YI NPLLLD +KFDLRLY+LVTSFN LEAF Y EGF R+ THRY + D N F+HLTNSSIQ+ D+P+ +A ++EAGGTK +L+YLW RLAA+ V A+ A I V+VKSLV E +IP Q NSF+L+GYDIL+D++
Sbjct: 912 VVVQKYIENPLLLDGFKFDLRLYVLVTSFNPLEAFFYNEGFVRICTHRYSTDSADLGNLFMHLTNSSIQKHGHMDQVADNPVHQADATEAGGTKASLAYLWSRLAAANAPVDAIKAAIVDVIVKSLVAGEDSIPYQVNSFDLYGYDILLDDQ 1063
BLAST of mRNA_H-elongata_contig8528.16120.1 vs. uniprot
Match: A0A067C1V7_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C1V7_SAPPC) HSP 1 Score: 169 bits (427), Expect = 1.070e-44 Identity = 89/151 (58.94%), Postives = 114/151 (75.50%), Query Frame = 1
Query: 1 VVVQRYICNPLLLDAYKFDLRLYILVTSFNKLEAFIYREGFARLSTHRY--EMGNIDNHFIHLTNSSIQRLNESGATCDSPLLRASSSEAGGTKTTLSYLWRRLAASGIDVRALWAEICSVVVKSLVCVEGAIPNQPNSFELFGYDILIDE 447
VVVQ+YI NPLLLD +KFDLRLY+LVTSFN LEAF Y+EGF R+ THRY + +I++ F+HLTNSSIQ+ + D+P+ AS++EAGGTK +L+YLW RLAA V + +I V++KSLV E AIP Q NSF++FGYDIL+DE
Sbjct: 875 VVVQKYIENPLLLDGFKFDLRLYVLVTSFNPLEAFFYQEGFVRICTHRYSSDATDINDLFMHLTNSSIQKYGDMDQVADNPVNNASTTEAGGTKASLAYLWSRLAAVHAPVEQIKEDIIHVILKSLVAGEDAIPYQVNSFDVFGYDILLDE 1025 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8528.16120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8528.16120.1 >prot_H-elongata_contig8528.16120.1 ID=prot_H-elongata_contig8528.16120.1|Name=mRNA_H-elongata_contig8528.16120.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp MGNIDNHFIHLTNSSIQRLNESGATCDSPLLRASSSEAGGTKTTLSYLWRback to top mRNA from alignment at H-elongata_contig8528:4596..7439- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8528.16120.1 ID=mRNA_H-elongata_contig8528.16120.1|Name=mRNA_H-elongata_contig8528.16120.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2844bp|location=Sequence derived from alignment at H-elongata_contig8528:4596..7439- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8528:4596..7439- >mRNA_H-elongata_contig8528.16120.1 ID=mRNA_H-elongata_contig8528.16120.1|Name=mRNA_H-elongata_contig8528.16120.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=624bp|location=Sequence derived from alignment at H-elongata_contig8528:4596..7439- (Himanthalia elongata Himel1 dioecious)back to top |