mRNA_H-elongata_contig85235.16113.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: D7FK83_ECTSI (Calcium dependent protein kinase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK83_ECTSI) HSP 1 Score: 324 bits (830), Expect = 6.300e-108 Identity = 161/179 (89.94%), Postives = 170/179 (94.97%), Query Frame = 1
Query: 1 IELKDVETHEQYEFLLNEIEIMKRLDHPNIARYKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKILYSDIAKDFILKLLQKDPSKRLTAQE 537
IELKDVET EQYEFLLNEIEIMK+LDHPNIARYKFRSED+TAKIVNKLINALRYCHDRN+AHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGV+TYCLL GFPPFR+V LK LK++ILYS AKDFI KLL+KDP KR TAQ+
Sbjct: 78 IELKDVETVEQYEFLLNEIEIMKQLDHPNIARYKFRSEDETAKIVNKLINALRYCHDRNIAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVITYCLLAGFPPFRSVNLKGLKEQILYS-YAKDFIQKLLKKDPQKRWTAQQ 255
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: A0A6H5KFV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFV6_9PHAE) HSP 1 Score: 308 bits (790), Expect = 1.590e-95 Identity = 162/218 (74.31%), Postives = 172/218 (78.90%), Query Frame = 1
Query: 1 IELKDVETHEQYEFLLNEIEIMKRLDHPNIAR--------------------------YKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKILYSDI-------------AKDFILKLLQKDPSKRLTAQE 537
IELKDVET EQYEFLLNEIEIMK+LDHPNIAR YKFRSED+TAKIVNKLINALRYCHDRN+AHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGV+TYCLL GFPPFR+V LK LK++ILYS + AKDFI KLL+KDP KRLTAQ+
Sbjct: 78 IELKDVETVEQYEFLLNEIEIMKQLDHPNIARVQEVFHTPDHYYMVMDLYTGGDMYARYKFRSEDETAKIVNKLINALRYCHDRNIAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVITYCLLAGFPPFRSVNLKGLKEQILYSKVTFEEEPWKNVSSYAKDFIQKLLKKDPQKRLTAQQ 295
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: A0A835ZF12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF12_9STRA) HSP 1 Score: 179 bits (455), Expect = 5.650e-49 Identity = 92/218 (42.20%), Postives = 129/218 (59.17%), Query Frame = 1
Query: 1 IELKDVETHEQYEFLLNEIEIMKRLDHPNIAR--------------------------YKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKILY-------------SDIAKDFILKLLQKDPSKRLTAQE 537
+EL V + ++F + E++IMK LDHPNI R YKF++E A IV ++NA+RYCHDR +AHRD+KL+NI +E DAEVKLVDFGLS + + Q+ HD+VG+W +MAPEV+ +H P ACD+WS+GV+ Y LL G+PPF LK +I + + +AK FI +LL ++P +R+TA E
Sbjct: 488 VELDRVRDKKSFDFFMKEVDIMKNLDHPNIVRLQEVFHTPDYLFLVMDLCTGGNLLQSYKFKTERAAADIVRNIVNAIRYCHDRGIAHRDLKLDNIVYEHNGPDAEVKLVDFGLSCHYTEAQLEHDVVGTWIYMAPEVIGGSHFPTACDMWSIGVIAYLLLCGYPPFSGETRDKLKWQIRHGTYKFHDSAWRHITPLAKSFITRLLVRNPQERMTAAE 705
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: D8LG93_ECTSI (Calcium-dependent protein kinase 2 (PfCDPK2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG93_ECTSI) HSP 1 Score: 176 bits (447), Expect = 1.660e-48 Identity = 93/218 (42.66%), Postives = 132/218 (60.55%), Query Frame = 1
Query: 1 IELKDVETHEQYEFLLNEIEIMKRLDHPNIAR--------------------------YKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKI----------LYSDI---AKDFILKLLQKDPSKRLTAQE 537
+EL V+ + F E+E+M++LDHPNI R Y F+SE + A IV ++ NA+RY HDRN+AHRD+KL+NI + + A+VKLVDFGLSA FKD Q+ HD+VG+W +MAPEV+ +H P+ CD+WS+GV+ Y LL G+PPF LK++I +SDI AK+FI +LL ++P +R++A E
Sbjct: 115 VELSRVKDEKSLNFFFREVEVMRQLDHPNICRLHAVYPTVEHLFMVMDLCEGGDLLTTYHFKSERNAANIVLRVTNAVRYMHDRNIAHRDLKLDNILTDETKEGADVKLVDFGLSAHFKDFQLEHDVVGTWVYMAPEVISGSHFPRTCDMWSIGVIAYLLLCGYPPFGGSSTAELKEQIQHGTYQFHHEAWSDISGKAKNFIKRLLVRNPQERMSAAE 332
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: A0A6H5K413_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K413_9PHAE) HSP 1 Score: 164 bits (415), Expect = 2.310e-46 Identity = 80/163 (49.08%), Postives = 112/163 (68.71%), Query Frame = 1
Query: 88 IARYKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKI----------LYSDI---AKDFILKLLQKDPSKRLTAQE 537
+ Y F+SE + A I+ K+ NA+RY HDRN+AHRD+KL+NI + + A+VKLVDFGLSA FKD Q+ HD+VG+W +MAPEV+ +H P+ CD+WS+GV+ Y LL G+PPF LKD+I +SDI AK+FI +LL ++P +R++A E
Sbjct: 116 LTTYHFKSERNAANIILKVTNAVRYMHDRNIAHRDLKLDNILTDETKEGADVKLVDFGLSAHFKDFQLEHDVVGTWVYMAPEVISGSHFPRTCDMWSIGVIAYLLLCGYPPFGGTSTAELKDQIQHGTYQFHHDAWSDISGKAKNFIKRLLVRNPQERMSAAE 278
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: A0A835Z6S6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6S6_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.750e-36 Identity = 80/218 (36.70%), Postives = 119/218 (54.59%), Query Frame = 1
Query: 1 IELKDVETHEQYEFLLNEIEIMKRLDHPNIARY--------------------------KFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKILYSDI-------------AKDFILKLLQKDPSKRLTAQE 537
+E+K ++ + +NE+EIMK+LDHP++AR + R+E D A +V +++ +RYCH+ N+AHRD+KLENI +E DA +K+VDFGL + QM D+VG+ V +R H + C WS+G++TY L+VG PF A L+ L+ I D+ KDFI +LL KDPS+R+TA+E
Sbjct: 111 VEIKGLKDEAHFALFMNEVEIMKKLDHPSVARLQEVYHSPDYVFMVMDLYAGGDLVDRQRIRTEQDAAAVVKDIVDGIRYCHEHNIAHRDLKLENILYEHSGPDAGIKIVDFGLGTTGTQAQMMRDIVGTIF-----VHEREHVVERCCRWSIGIITYTLMVGRFPFMAESLQMLQHMIKTKDVDMDTEDWEVASPDCKDFIARLLVKDPSRRMTAKE 323
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: A0A6H5KC85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC85_9PHAE) HSP 1 Score: 138 bits (347), Expect = 1.290e-34 Identity = 74/212 (34.91%), Postives = 122/212 (57.55%), Query Frame = 1
Query: 1 IELKDVETHEQYEFLLNEIEIMKRLDHPNIAR--------------------------YKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAE---VKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKILYS------DIAKDFILKLLQKDPSKRLTA 531
++L V++ + ++F++NE++++K LDHPNI R Y+ E A I+ +++ ALRY HDR++AHRD+KLEN+ E+ + +KL+DFGLSA +++ + D++GSW ++APEV++ +HP D+WS+GVVT+ L+ PF A + ++ IL+S + +K F+ LL K RLTA
Sbjct: 4 VKLSSVKSEKAFDFIMNEVDLLKTLDHPNIVRLQEVYMSDSHLFMAMDLITGGNLAGSYRCDGEHTAAIIIRQIVRALRYLHDRHIAHRDLKLENVLIETGDKEGSPPAIKLIDFGLSAIYRENGVSTDILGSWNYVAPEVIKGQYHPAPADMWSLGVVTHFLMSRMLPFNADTSEGIQRNILWSAWARASEASKHFVRSLLLKSADLRLTA 215
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: B8CEJ9_THAPS (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEJ9_THAPS) HSP 1 Score: 130 bits (327), Expect = 3.020e-34 Identity = 80/198 (40.40%), Postives = 121/198 (61.11%), Query Frame = 1
Query: 1 IELKDVETHEQYEFLLNEI----EIMKRL-DHPNIARYKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSAS-FKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRA-----VYLKHLKDKILYSDI--------AKDFILKLLQKDPSKRLTAQE 537
I+L DV +Y L+ ++ E+ R+ + + A++ SE AKI+++L+NAL Y H NV HRDIK ENI FE+ +D+ +K++DFGL+ + ++ +VG+ ++AP+VL++++ +ACDLWS+GV+TY LL G+PPF A VY K + AKDFI KLLQ DPSKR+T +E
Sbjct: 55 IQLVDVYEDAEYVHLVTKLCEGGELFDRIVEKSSDAKHGCFSEHQAAKILHQLLNALSYMHKHNVVHRDIKPENILFETEDEDSPIKIIDFGLARKHYANKSPMKTIVGTPYYIAPDVLRKSYG-KACDLWSVGVITYTLLAGYPPFNATDIKGVYAAVQSGKYCFPSADWKHISLEAKDFIRKLLQTDPSKRMTTEE 251
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: A0A8J8NZM9_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NZM9_HALGN) HSP 1 Score: 134 bits (336), Expect = 3.880e-33 Identity = 83/222 (37.39%), Postives = 118/222 (53.15%), Query Frame = 1
Query: 43 LLNEIEIMKRLDHPNIARY------------------------------KFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASF--------------KDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKIL-------------YSDIAKDFILKLLQKDPSKRLTAQE 537
L NE EI+K++DHPNI ++ KF SE ++I+ ++++A+++ HDRN+ HRD+K ENI FES + DA+VKL+DFGLS F K++ + +G+ +MAPEV+ + + Q CD+WS+GV+ YCLL G+PPF A L KI S AKDFI LLQ DP KRLT ++
Sbjct: 190 LENEFEILKQVDHPNIIKFYEMYVDDKDYHLVTEYCGGGELFDHIIERGKF-SESYASRIIKQILSAIKHLHDRNICHRDLKPENILFESKSKDAQVKLIDFGLSKYFISNNYASRGSLIGRKEQNLMQTKIGTPYYMAPEVI-KGSYDQTCDMWSLGVIAYCLLCGYPPFNAENDLQLFRKISKCEYEFYMPEWGSVSQDAKDFIDALLQLDPKKRLTPEQ 409
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: A0A1R2B5U0_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B5U0_9CILI) HSP 1 Score: 130 bits (328), Expect = 1.030e-32 Identity = 74/212 (34.91%), Postives = 112/212 (52.83%), Query Frame = 1
Query: 28 EQYEFLLNEIEIMKRLDHPNIA-----------------------------RYKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKIL-------------YSDIAKDFILKLLQKDPSKRLTAQE 537
+ Y+ +NEIEI+K+LDHPNI + +E A I+ +L +A+ YCH+ N+ HRD+K EN + + D++E+K++DFGLSA K+E + HDL G+ ++APE++ ++ + D WS+GV+ Y LL G PPF + + SD AKD I +LL KDPS R+TAQ+
Sbjct: 61 QDYQTFVNEIEILKKLDHPNIVNIIETYENERICFIVLEHCRGGELFDRLVKLNHFTEAQAASIMKQLFSAIMYCHNNNICHRDLKPENCLYVTEDDNSEIKIIDFGLSAQAKEEDLLHDLTGTPYYVAPEMMS-GNYTKVVDCWSLGVILYVLLSGTPPFNGKDNNEILMSVYNGSYTFRPNTFKSVSDYAKDLISRLLTKDPSHRITAQQ 271 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig85235.16113.1 >prot_H-elongata_contig85235.16113.1 ID=prot_H-elongata_contig85235.16113.1|Name=mRNA_H-elongata_contig85235.16113.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=179bp IELKDVETHEQYEFLLNEIEIMKRLDHPNIARYKFRSEDDTAKIVNKLINback to top mRNA from alignment at H-elongata_contig85235:1..2658+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig85235.16113.1 ID=mRNA_H-elongata_contig85235.16113.1|Name=mRNA_H-elongata_contig85235.16113.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2658bp|location=Sequence derived from alignment at H-elongata_contig85235:1..2658+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig85235:1..2658+ >mRNA_H-elongata_contig85235.16113.1 ID=mRNA_H-elongata_contig85235.16113.1|Name=mRNA_H-elongata_contig85235.16113.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1074bp|location=Sequence derived from alignment at H-elongata_contig85235:1..2658+ (Himanthalia elongata Himel1 dioecious)back to top |