mRNA_H-elongata_contig85235.16113.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig85235.16113.1
Unique NamemRNA_H-elongata_contig85235.16113.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: D7FK83_ECTSI (Calcium dependent protein kinase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK83_ECTSI)

HSP 1 Score: 324 bits (830), Expect = 6.300e-108
Identity = 161/179 (89.94%), Postives = 170/179 (94.97%), Query Frame = 1
Query:    1 IELKDVETHEQYEFLLNEIEIMKRLDHPNIARYKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKILYSDIAKDFILKLLQKDPSKRLTAQE 537
            IELKDVET EQYEFLLNEIEIMK+LDHPNIARYKFRSED+TAKIVNKLINALRYCHDRN+AHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGV+TYCLL GFPPFR+V LK LK++ILYS  AKDFI KLL+KDP KR TAQ+
Sbjct:   78 IELKDVETVEQYEFLLNEIEIMKQLDHPNIARYKFRSEDETAKIVNKLINALRYCHDRNIAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVITYCLLAGFPPFRSVNLKGLKEQILYS-YAKDFIQKLLKKDPQKRWTAQQ 255          
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: A0A6H5KFV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFV6_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 1.590e-95
Identity = 162/218 (74.31%), Postives = 172/218 (78.90%), Query Frame = 1
Query:    1 IELKDVETHEQYEFLLNEIEIMKRLDHPNIAR--------------------------YKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKILYSDI-------------AKDFILKLLQKDPSKRLTAQE 537
            IELKDVET EQYEFLLNEIEIMK+LDHPNIAR                          YKFRSED+TAKIVNKLINALRYCHDRN+AHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGV+TYCLL GFPPFR+V LK LK++ILYS +             AKDFI KLL+KDP KRLTAQ+
Sbjct:   78 IELKDVETVEQYEFLLNEIEIMKQLDHPNIARVQEVFHTPDHYYMVMDLYTGGDMYARYKFRSEDETAKIVNKLINALRYCHDRNIAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVITYCLLAGFPPFRSVNLKGLKEQILYSKVTFEEEPWKNVSSYAKDFIQKLLKKDPQKRLTAQQ 295          
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: A0A835ZF12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF12_9STRA)

HSP 1 Score: 179 bits (455), Expect = 5.650e-49
Identity = 92/218 (42.20%), Postives = 129/218 (59.17%), Query Frame = 1
Query:    1 IELKDVETHEQYEFLLNEIEIMKRLDHPNIAR--------------------------YKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKILY-------------SDIAKDFILKLLQKDPSKRLTAQE 537
            +EL  V   + ++F + E++IMK LDHPNI R                          YKF++E   A IV  ++NA+RYCHDR +AHRD+KL+NI +E    DAEVKLVDFGLS  + + Q+ HD+VG+W +MAPEV+  +H P ACD+WS+GV+ Y LL G+PPF       LK +I +             + +AK FI +LL ++P +R+TA E
Sbjct:  488 VELDRVRDKKSFDFFMKEVDIMKNLDHPNIVRLQEVFHTPDYLFLVMDLCTGGNLLQSYKFKTERAAADIVRNIVNAIRYCHDRGIAHRDLKLDNIVYEHNGPDAEVKLVDFGLSCHYTEAQLEHDVVGTWIYMAPEVIGGSHFPTACDMWSIGVIAYLLLCGYPPFSGETRDKLKWQIRHGTYKFHDSAWRHITPLAKSFITRLLVRNPQERMTAAE 705          
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: D8LG93_ECTSI (Calcium-dependent protein kinase 2 (PfCDPK2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG93_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.660e-48
Identity = 93/218 (42.66%), Postives = 132/218 (60.55%), Query Frame = 1
Query:    1 IELKDVETHEQYEFLLNEIEIMKRLDHPNIAR--------------------------YKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKI----------LYSDI---AKDFILKLLQKDPSKRLTAQE 537
            +EL  V+  +   F   E+E+M++LDHPNI R                          Y F+SE + A IV ++ NA+RY HDRN+AHRD+KL+NI  +   + A+VKLVDFGLSA FKD Q+ HD+VG+W +MAPEV+  +H P+ CD+WS+GV+ Y LL G+PPF       LK++I           +SDI   AK+FI +LL ++P +R++A E
Sbjct:  115 VELSRVKDEKSLNFFFREVEVMRQLDHPNICRLHAVYPTVEHLFMVMDLCEGGDLLTTYHFKSERNAANIVLRVTNAVRYMHDRNIAHRDLKLDNILTDETKEGADVKLVDFGLSAHFKDFQLEHDVVGTWVYMAPEVISGSHFPRTCDMWSIGVIAYLLLCGYPPFGGSSTAELKEQIQHGTYQFHHEAWSDISGKAKNFIKRLLVRNPQERMSAAE 332          
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: A0A6H5K413_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K413_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 2.310e-46
Identity = 80/163 (49.08%), Postives = 112/163 (68.71%), Query Frame = 1
Query:   88 IARYKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKI----------LYSDI---AKDFILKLLQKDPSKRLTAQE 537
            +  Y F+SE + A I+ K+ NA+RY HDRN+AHRD+KL+NI  +   + A+VKLVDFGLSA FKD Q+ HD+VG+W +MAPEV+  +H P+ CD+WS+GV+ Y LL G+PPF       LKD+I           +SDI   AK+FI +LL ++P +R++A E
Sbjct:  116 LTTYHFKSERNAANIILKVTNAVRYMHDRNIAHRDLKLDNILTDETKEGADVKLVDFGLSAHFKDFQLEHDVVGTWVYMAPEVISGSHFPRTCDMWSIGVIAYLLLCGYPPFGGTSTAELKDQIQHGTYQFHHDAWSDISGKAKNFIKRLLVRNPQERMSAAE 278          
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: A0A835Z6S6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6S6_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.750e-36
Identity = 80/218 (36.70%), Postives = 119/218 (54.59%), Query Frame = 1
Query:    1 IELKDVETHEQYEFLLNEIEIMKRLDHPNIARY--------------------------KFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKILYSDI-------------AKDFILKLLQKDPSKRLTAQE 537
            +E+K ++    +   +NE+EIMK+LDHP++AR                           + R+E D A +V  +++ +RYCH+ N+AHRD+KLENI +E    DA +K+VDFGL  +    QM  D+VG+       V +R H  + C  WS+G++TY L+VG  PF A  L+ L+  I   D+              KDFI +LL KDPS+R+TA+E
Sbjct:  111 VEIKGLKDEAHFALFMNEVEIMKKLDHPSVARLQEVYHSPDYVFMVMDLYAGGDLVDRQRIRTEQDAAAVVKDIVDGIRYCHEHNIAHRDLKLENILYEHSGPDAGIKIVDFGLGTTGTQAQMMRDIVGTIF-----VHEREHVVERCCRWSIGIITYTLMVGRFPFMAESLQMLQHMIKTKDVDMDTEDWEVASPDCKDFIARLLVKDPSRRMTAKE 323          
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: A0A6H5KC85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC85_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 1.290e-34
Identity = 74/212 (34.91%), Postives = 122/212 (57.55%), Query Frame = 1
Query:    1 IELKDVETHEQYEFLLNEIEIMKRLDHPNIAR--------------------------YKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAE---VKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKILYS------DIAKDFILKLLQKDPSKRLTA 531
            ++L  V++ + ++F++NE++++K LDHPNI R                          Y+   E   A I+ +++ ALRY HDR++AHRD+KLEN+  E+   +     +KL+DFGLSA +++  +  D++GSW ++APEV++  +HP   D+WS+GVVT+ L+    PF A   + ++  IL+S      + +K F+  LL K    RLTA
Sbjct:    4 VKLSSVKSEKAFDFIMNEVDLLKTLDHPNIVRLQEVYMSDSHLFMAMDLITGGNLAGSYRCDGEHTAAIIIRQIVRALRYLHDRHIAHRDLKLENVLIETGDKEGSPPAIKLIDFGLSAIYRENGVSTDILGSWNYVAPEVIKGQYHPAPADMWSLGVVTHFLMSRMLPFNADTSEGIQRNILWSAWARASEASKHFVRSLLLKSADLRLTA 215          
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: B8CEJ9_THAPS (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEJ9_THAPS)

HSP 1 Score: 130 bits (327), Expect = 3.020e-34
Identity = 80/198 (40.40%), Postives = 121/198 (61.11%), Query Frame = 1
Query:    1 IELKDVETHEQYEFLLNEI----EIMKRL-DHPNIARYKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSAS-FKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRA-----VYLKHLKDKILYSDI--------AKDFILKLLQKDPSKRLTAQE 537
            I+L DV    +Y  L+ ++    E+  R+ +  + A++   SE   AKI+++L+NAL Y H  NV HRDIK ENI FE+  +D+ +K++DFGL+   + ++     +VG+  ++AP+VL++++  +ACDLWS+GV+TY LL G+PPF A     VY      K  +           AKDFI KLLQ DPSKR+T +E
Sbjct:   55 IQLVDVYEDAEYVHLVTKLCEGGELFDRIVEKSSDAKHGCFSEHQAAKILHQLLNALSYMHKHNVVHRDIKPENILFETEDEDSPIKIIDFGLARKHYANKSPMKTIVGTPYYIAPDVLRKSYG-KACDLWSVGVITYTLLAGYPPFNATDIKGVYAAVQSGKYCFPSADWKHISLEAKDFIRKLLQTDPSKRMTTEE 251          
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: A0A8J8NZM9_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NZM9_HALGN)

HSP 1 Score: 134 bits (336), Expect = 3.880e-33
Identity = 83/222 (37.39%), Postives = 118/222 (53.15%), Query Frame = 1
Query:   43 LLNEIEIMKRLDHPNIARY------------------------------KFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASF--------------KDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKIL-------------YSDIAKDFILKLLQKDPSKRLTAQE 537
            L NE EI+K++DHPNI ++                              KF SE   ++I+ ++++A+++ HDRN+ HRD+K ENI FES + DA+VKL+DFGLS  F              K++ +    +G+  +MAPEV+ +  + Q CD+WS+GV+ YCLL G+PPF A     L  KI               S  AKDFI  LLQ DP KRLT ++
Sbjct:  190 LENEFEILKQVDHPNIIKFYEMYVDDKDYHLVTEYCGGGELFDHIIERGKF-SESYASRIIKQILSAIKHLHDRNICHRDLKPENILFESKSKDAQVKLIDFGLSKYFISNNYASRGSLIGRKEQNLMQTKIGTPYYMAPEVI-KGSYDQTCDMWSLGVIAYCLLCGYPPFNAENDLQLFRKISKCEYEFYMPEWGSVSQDAKDFIDALLQLDPKKRLTPEQ 409          
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Match: A0A1R2B5U0_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B5U0_9CILI)

HSP 1 Score: 130 bits (328), Expect = 1.030e-32
Identity = 74/212 (34.91%), Postives = 112/212 (52.83%), Query Frame = 1
Query:   28 EQYEFLLNEIEIMKRLDHPNIA-----------------------------RYKFRSEDDTAKIVNKLINALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLKDKIL-------------YSDIAKDFILKLLQKDPSKRLTAQE 537
            + Y+  +NEIEI+K+LDHPNI                              +    +E   A I+ +L +A+ YCH+ N+ HRD+K EN  + +  D++E+K++DFGLSA  K+E + HDL G+  ++APE++   ++ +  D WS+GV+ Y LL G PPF       +   +               SD AKD I +LL KDPS R+TAQ+
Sbjct:   61 QDYQTFVNEIEILKKLDHPNIVNIIETYENERICFIVLEHCRGGELFDRLVKLNHFTEAQAASIMKQLFSAIMYCHNNNICHRDLKPENCLYVTEDDNSEIKIIDFGLSAQAKEEDLLHDLTGTPYYVAPEMMS-GNYTKVVDCWSLGVILYVLLSGTPPFNGKDNNEILMSVYNGSYTFRPNTFKSVSDYAKDLISRLLTKDPSHRITAQQ 271          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85235.16113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK83_ECTSI6.300e-10889.94Calcium dependent protein kinase 4 n=1 Tax=Ectocar... [more]
A0A6H5KFV6_9PHAE1.590e-9574.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZF12_9STRA5.650e-4942.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LG93_ECTSI1.660e-4842.66Calcium-dependent protein kinase 2 (PfCDPK2) n=1 T... [more]
A0A6H5K413_9PHAE2.310e-4649.08Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835Z6S6_9STRA3.750e-3636.70Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6H5KC85_9PHAE1.290e-3434.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B8CEJ9_THAPS3.020e-3440.40Protein kinase domain-containing protein (Fragment... [more]
A0A8J8NZM9_HALGN3.880e-3337.39Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
A0A1R2B5U0_9CILI1.030e-3234.91Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85235contigH-elongata_contig85235:1..2658 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score327.8
Seed ortholog evalue3.2e-87
Seed eggNOG ortholog2880.D7FK83
KEGG koko:K13412
KEGG Pathwayko04626,ko05145,map04626,map05145
GOsGO:0000165,GO:0000187,GO:0001817,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002224,GO:0002237,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006082,GO:0006464,GO:0006468,GO:0006690,GO:0006691,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009931,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010468,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010646,GO:0010647,GO:0010857,GO:0015630,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032147,GO:0032268,GO:0032270,GO:0032496,GO:0032675,GO:0032680,GO:0033554,GO:0033674,GO:0033993,GO:0034097,GO:0035556,GO:0035924,GO:0036211,GO:0042221,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043436,GO:0043487,GO:0043488,GO:0043489,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044351,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0045859,GO:0045860,GO:0045934,GO:0045937,GO:0046777,GO:0048010,GO:0048255,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051019,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051338,GO:0051347,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0061013,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070848,GO:0070887,GO:0070935,GO:0071310,GO:0071363,GO:0071704,GO:0071900,GO:0071902,GO:0080090,GO:0080134,GO:0080135,GO:0098657,GO:0140096,GO:1900034,GO:1901564,GO:1901568,GO:1901700,GO:1902369,GO:1902373,GO:1902531,GO:1902533,GO:1903311,GO:1903312,GO:1903555
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptioncalcium dependent protein kinase 4
Ec32 orthologEc-17_003120.1
Exons6
Model size537
Cds size537
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85235.16113.1prot_H-elongata_contig85235.16113.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig85235 1..2658 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931255.5862653-CDS-H-elongata_contig85235:0..951622931255.5862653-CDS-H-elongata_contig85235:0..95Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85235 1..95 +
1691679761.768629-CDS-H-elongata_contig85235:0..951691679761.768629-CDS-H-elongata_contig85235:0..95Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85235 1..95 +
1622931255.60342-CDS-H-elongata_contig85235:561..6491622931255.60342-CDS-H-elongata_contig85235:561..649Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85235 562..649 +
1691679761.783618-CDS-H-elongata_contig85235:561..6491691679761.783618-CDS-H-elongata_contig85235:561..649Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85235 562..649 +
1622931255.6210861-CDS-H-elongata_contig85235:1272..13681622931255.6210861-CDS-H-elongata_contig85235:1272..1368Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85235 1273..1368 +
1691679761.7942083-CDS-H-elongata_contig85235:1272..13681691679761.7942083-CDS-H-elongata_contig85235:1272..1368Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85235 1273..1368 +
1622931255.636298-CDS-H-elongata_contig85235:1698..17901622931255.636298-CDS-H-elongata_contig85235:1698..1790Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85235 1699..1790 +
1691679761.802906-CDS-H-elongata_contig85235:1698..17901691679761.802906-CDS-H-elongata_contig85235:1698..1790Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85235 1699..1790 +
1622931255.6508007-CDS-H-elongata_contig85235:2110..22061622931255.6508007-CDS-H-elongata_contig85235:2110..2206Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85235 2111..2206 +
1691679761.8116055-CDS-H-elongata_contig85235:2110..22061691679761.8116055-CDS-H-elongata_contig85235:2110..2206Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85235 2111..2206 +
1622931255.6691034-CDS-H-elongata_contig85235:2588..26581622931255.6691034-CDS-H-elongata_contig85235:2588..2658Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85235 2589..2658 +
1691679761.8226678-CDS-H-elongata_contig85235:2588..26581691679761.8226678-CDS-H-elongata_contig85235:2588..2658Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85235 2589..2658 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig85235.16113.1

>prot_H-elongata_contig85235.16113.1 ID=prot_H-elongata_contig85235.16113.1|Name=mRNA_H-elongata_contig85235.16113.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=179bp
IELKDVETHEQYEFLLNEIEIMKRLDHPNIARYKFRSEDDTAKIVNKLIN
ALRYCHDRNVAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHD
LVGSWAFMAPEVLQRAHHPQACDLWSMGVVTYCLLVGFPPFRAVYLKHLK
DKILYSDIAKDFILKLLQKDPSKRLTAQE
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mRNA from alignment at H-elongata_contig85235:1..2658+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig85235.16113.1 ID=mRNA_H-elongata_contig85235.16113.1|Name=mRNA_H-elongata_contig85235.16113.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2658bp|location=Sequence derived from alignment at H-elongata_contig85235:1..2658+ (Himanthalia elongata Himel1 dioecious)
ATCGAGCTCAAGGATGTCGAGACCCATGAACAGTACGAGTTTTTGCTGAA CGAGATCGAGATCATGAAAAGGCTCGACCACCCCAACATCGCCAGGTGAG CAGCCTTAGCGGGTTTCGATTGCGGAAGGCGTTTACACAGAAGGGTTAAA GTGTGTTACGCGAGAAAGAAGACGGCTCCTGCAGCCTCTGGAAGAAGTAA GAACCTCGTTAAGGGACTCTCGCCGAATCGCCACCCTAGACTGCGGTTAG GCCAGCTTCCCCCGTGAACGTGTCATGTTTCTGGGTGAAATGATTTACGT GAGGGACAAACTTTCAACCACAAAAATCGTGGTTGAGATTCCGTCTGCCC CGCCGCTGATCGGGGGGATTTTTCTGGACTGTGTTTGGTGCTAGAAATGC CCTTTTTTTAAACTCACGCAAGGTAAGAATAACGACTCCTACATGTCACG CCGAACTCCCCTATATTCCCTATATCCTGACAGAGTCCAGGAAGTTTTTC ACACCCCCGACCACTACTATATGGTGATGGATTTGTACACCGGGGGTGAC ATGTACGCGAGATACAAGTTCCGCAGCGAGGACGACACGGCTAAGATCGT TAACAAGCTCATCAATGCGCTGCGGTACTGCCACGACAGAAACGTTGCGG TGAGGTTTTTTGGGGGGTGTTTATTAAATTGCACATAACCGCGCAATCCG GCTTTTGTCATGCTAGTCCTTCTAGGCTACTCTTTCTCCCTCGCATTGAT TGATCCTCCCTATATGGGGGATGTGCGCGTGTGTGTGTAAATCGAGGGAT CTCAATGATAATTCAATGGCATTTGTTACGCGTGTGTGTTATTTGTGTGG GAACTCTTTGTAATTTATAAATGTGTCGACAGGTACTTTGAGAAACAAAT CGCGTCCGTTTCGTTCCTTGTGTGTGTGTGTGTGTTTATCAAGCGTGTCT CAGTGCATTGACTTGTGTTTCACCTGCTGTAATGTAATTCGGCGATGGAG AAAAGGGGAAAGGGAGAGGCGAATCGACGTCCTAACGAAGCGCTGCGCAA GATTTTTATCGCCGGCAAGACCGGGGGGACTGAATAGTTCCTATCGAACG TCTCCCACCCCGATCCCCGATTTGGCAGATGCAAGAGATGAACACCGCCC GTTGTTGTCTTCCTCTACAGTAGAATCACAATATTTTAATAATAATAATA ATAATAATAATAATAGTAATATTAAGGAAGCTATTTCTCTTGCCCTACTC GATCTTCTCTGCGTCTTTCCAGCATCGCGACATTAAGCTGGAGAATATCT GCTTTGAGTCAATGGCCGACGACGCGGAGGTGAAACTGGTCGACTTCGGT CTCAGCGCTTCCTTCAAGGTGGGTCTGCTGTCGGCGCTTCCAGAGAGTTG AGCTGTCGATGCTTGCAGGGAGTTGGGCTGTCGATTTCACCGTCCGTCAC CGCCAATACACCCTCTACGCAGACAAGCGCTACCGCGTGTCAACGTCCGA TCGCCAATGGCCGACAAGAGGGTCTCACCGGCATGTTTTTTTTGGGGATG CTTTAAATTGAGATTTTTGTGGAGGCGTTTTTTTCCTGGTGTGTTTGACT TGAATTATCGTTTTGCCCTAGTTTTTCAACTTTCGTCCTGTCTTGGCGTC TTGTGTCGTTGTTTTGTAAATTTCATTTTCTTTTTGTAAATTTATCAGGA CGAGCAAATGCGACACGATCTGGTCGGCTCTTGGGCGTTTATGGCGCCGG AGGTCCTCCAGAGGGCGCATCATCCACAAGCGTGCGACCTGTAAGTGTTG CTCCCGCGCTTTTCCCGAGGAGGCTAGACGTATACACCCGGTTTCGTGGC TGGCGTCGGATCGTCTTGGCGTATAAGCGGGGCTGCACACGATAGAATAC ACAGCTTTGGTAATCGACAAGTTTCGTGGGGAGACAGACACACCTATTAA TCGTAATCGCACCTTTCCACCTCTTAATACTCGTCTCGTCTCGTCTCGTC TCGTCTTGCTAGGCTCTTTTTTTCATTGCGACAGGATCTGCCTGCTAGTG CTGTTATGCTGCATTGGAGGTAACCGCCATCTATATATTTTTTTGTCGAA CCGTAACCAGGTGGAGCATGGGGGTGGTTACTTATTGCCTGCTGGTGGGC TTCCCGCCGTTCAGAGCGGTGTACCTGAAGCACCTTAAGGACAAAATATT GTACAGGTGGGGAAAGAAAAGAGAAAATGACGACGCGACGGGTCTCGAAT CATTGCGGGCGAACCTCTTGAGTGTCATTTTCAGCCCCCCCCTTTTGCTC ATCTCTCCTCCATTGGGCAGCATAGCAAGTCGAAATAATATATTATAGAT TTAATTTTGAAGTGTTTTTTTTAAGAAATCGAAAGCAGCGGAACTTGTTT GTCCGGGAACTGACTTAGCAGATTAATACATTATTAGAATATTTGTGACT TAACTTTGGTGAATGGCTGATGATGTTGATTTCTGACAAAGTGAGCCTCG CGCGCGGGCGCATGTCTTGGAATCGCCGACGTCGTTGGAAATTGAGCAGT AAGGTGACGTTCGAGGAGGAGCCGTGGAGAAATGTGAGCGATATTGCAAA GGACTTCATCCTCAAGCTGCTGCAGAAGGATCCATCAAAGCGCCTAACCG CCCAGGAG
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Coding sequence (CDS) from alignment at H-elongata_contig85235:1..2658+

>mRNA_H-elongata_contig85235.16113.1 ID=mRNA_H-elongata_contig85235.16113.1|Name=mRNA_H-elongata_contig85235.16113.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1074bp|location=Sequence derived from alignment at H-elongata_contig85235:1..2658+ (Himanthalia elongata Himel1 dioecious)
ATCGAGCTCAAGGATGTCGAGACCCATGAACAGTACGAGTTTTTGCTGAA
CGAGATCGAGATCATGAAAAGGCTCGACCACCCCAACATCGCCAGATCGA
GCTCAAGGATGTCGAGACCCATGAACAGTACGAGTTTTTGCTGAACGAGA
TCGAGATCATGAAAAGGCTCGACCACCCCAACATCGCCAGATACAAGTTC
CGCAGCGAGGACGACACGGCTAAGATCGTTAACAAGCTCATCAATGCGCT
GCGGTACTGCCACGACAGAAACGTTGCGATACAAGTTCCGCAGCGAGGAC
GACACGGCTAAGATCGTTAACAAGCTCATCAATGCGCTGCGGTACTGCCA
CGACAGAAACGTTGCGCATCGCGACATTAAGCTGGAGAATATCTGCTTTG
AGTCAATGGCCGACGACGCGGAGGTGAAACTGGTCGACTTCGGTCTCAGC
GCTTCCTTCAAGCATCGCGACATTAAGCTGGAGAATATCTGCTTTGAGTC
AATGGCCGACGACGCGGAGGTGAAACTGGTCGACTTCGGTCTCAGCGCTT
CCTTCAAGGACGAGCAAATGCGACACGATCTGGTCGGCTCTTGGGCGTTT
ATGGCGCCGGAGGTCCTCCAGAGGGCGCATCATCCACAAGCGTGCGACCT
GACGAGCAAATGCGACACGATCTGGTCGGCTCTTGGGCGTTTATGGCGCC
GGAGGTCCTCCAGAGGGCGCATCATCCACAAGCGTGCGACCTGTGGAGCA
TGGGGGTGGTTACTTATTGCCTGCTGGTGGGCTTCCCGCCGTTCAGAGCG
GTGTACCTGAAGCACCTTAAGGACAAAATATTGTACAGGTGGAGCATGGG
GGTGGTTACTTATTGCCTGCTGGTGGGCTTCCCGCCGTTCAGAGCGGTGT
ACCTGAAGCACCTTAAGGACAAAATATTGTACAGCGATATTGCAAAGGAC
TTCATCCTCAAGCTGCTGCAGAAGGATCCATCAAAGCGCCTAACCGCCCA
GGAGCGATATTGCAAAGGACTTCATCCTCAAGCTGCTGCAGAAGGATCCA
TCAAAGCGCCTAACCGCCCAGGAG
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