mRNA_H-elongata_contig85132.16105.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig85132.16105.1
Unique NamemRNA_H-elongata_contig85132.16105.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: D7G548_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G548_ECTSI)

HSP 1 Score: 417 bits (1073), Expect = 2.430e-139
Identity = 207/219 (94.52%), Postives = 211/219 (96.35%), Query Frame = 1
Query:   13 VSDEKDGWVPARILNESGDSANVQLQTGAKRKVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPRGQASG 669
            VSDEKDGWVPARIL ESGDSANVQLQ G+K+ VKRSAKEPLWPLNHSSLSR+EDDLVMVDAINQGLMVHNLRERYRRD IYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQEN SQAILISGESGAGKTEATKQCFNFLAEVAGSQN VEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDP+GQ  G
Sbjct:    2 VSDEKDGWVPARILKESGDSANVQLQNGSKKTVKRSAKEPLWPLNHSSLSRVEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQNAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPKGQVCG 220          
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: A0A6H5KSK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK5_9PHAE)

HSP 1 Score: 421 bits (1082), Expect = 2.970e-135
Identity = 209/222 (94.14%), Postives = 214/222 (96.40%), Query Frame = 1
Query:    1 PYPQVSDEKDGWVPARILNESGDSANVQLQTGAKRKVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPRGQAS 666
            P+  VSDEKDGWVPARIL ESGDSANVQLQ G+K+ VKRSAKEPLWPLNHSSLSR+EDDLVMVDAINQGLMVHNLRERYRRD IYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQEN SQAILISGESGAGKTEATKQCFNFLAEVAGSQN VEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDP+GQAS
Sbjct:   55 PWAWVSDEKDGWVPARILKESGDSANVQLQNGSKKTVKRSAKEPLWPLNHSSLSRVEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQNAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPKGQAS 276          
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: A0A836C908_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C908_9STRA)

HSP 1 Score: 330 bits (847), Expect = 1.710e-101
Identity = 169/221 (76.47%), Postives = 186/221 (84.16%), Query Frame = 1
Query:   13 VSDEKDGWVPARILNES-GDSA-NVQLQTGAKRKVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPRGQASG 669
            V+DEK+G+ PAR+L  + GD+  NVQLQ+GAKR VK    EPLWPL  SSL+R+EDDLVMVD IN GLM H LR RYRRD IYTWVGANHSVLVSINPFK LPIY PA I EYA+PSAYRLDPPHTFAIANSAF +L  E  SQA+LISGESGAGKTEATKQCF+FLAEVAGS + VEQRIL ANPVLE+FGNAKTLRNNNSSRFGRWTEVHFD + +  G
Sbjct:  165 VTDEKEGYAPARVLKGAPGDTTLNVQLQSGAKRSVKAGKGEPLWPLKPSSLTRVEDDLVMVDDINTGLMAHCLRARYRRDAIYTWVGANHSVLVSINPFKQLPIYGPAQIAEYARPSAYRLDPPHTFAIANSAFRRLALEGASQAVLISGESGAGKTEATKQCFSFLAEVAGSADAVEQRILCANPVLEAFGNAKTLRNNNSSRFGRWTEVHFDAQSRICG 385          
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: A0A7S1U0Y1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0Y1_9STRA)

HSP 1 Score: 296 bits (759), Expect = 6.740e-98
Identity = 142/213 (66.67%), Postives = 174/213 (81.69%), Query Frame = 1
Query:   13 VSDEKDGWVPARILNESGDSANVQLQTGAKRKVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDP 651
            VSD+K  W PAR+   + + A+VQL +G  + + +SA EPLWPL  SSL+ +EDDLVMVD +NQGLM+H LRERY +DKIYTWVGANH+VL+S+NPFK LPIYS  T+ E++KP A R+ PPH FAIA++AF+ L     +QA+LISGESGAGKTEATKQ   +LAE+AGS+NNVEQ+IL ANPVLE+FGNAKTLRNNNSSRFGRW EVHF+P
Sbjct:   67 VSDQKVTWAPARVTKRTPEGAHVQLSSGRAKVIVKSAAEPLWPLKKSSLNHLEDDLVMVDDLNQGLMMHCLRERYGQDKIYTWVGANHTVLISVNPFKQLPIYSVETMNEFSKPGANRVPPPHVFAIAHNAFLALKIGARNQAVLISGESGAGKTEATKQVLAYLAEIAGSENNVEQKILSANPVLEAFGNAKTLRNNNSSRFGRWMEVHFEP 279          
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: A0A7R9UA42_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA42_9STRA)

HSP 1 Score: 290 bits (741), Expect = 1.750e-89
Identity = 139/213 (65.26%), Postives = 167/213 (78.40%), Query Frame = 1
Query:   13 VSDEKDGWVPARILNESGDSANVQLQTGAKRKVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDP 651
            VSD K  W PA+++ ++     VQL  G  + + +S  EPLWPL  SSL+ +E+DLVMVD +NQGLM+H LRERY RDKIYTWVGANH+VL+S+NPFK LPIYS  T+ E+AKP A R+  PH FAIA  +F  +  +  +QAILISGESGAGKTEATKQC  +LAE+AGS NNVEQ+IL ANPVLE+FGNAKTLRNNNSSRFGRW EVHF+P
Sbjct:   72 VSDPKVAWAPAKVVRKTSSGVEVQLGNGRPKVLTKSKAEPLWPLKKSSLNHLEEDLVMVDDLNQGLMMHCLRERYARDKIYTWVGANHTVLISVNPFKQLPIYSIETMSEFAKPGANRVQKPHVFAIAQDSFTHMKIQARNQAILISGESGAGKTEATKQCLAYLAEMAGSDNNVEQKILSANPVLEAFGNAKTLRNNNSSRFGRWMEVHFEP 284          
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: F0Y2B5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2B5_AURAN)

HSP 1 Score: 276 bits (707), Expect = 1.330e-84
Identity = 138/221 (62.44%), Postives = 174/221 (78.73%), Query Frame = 1
Query:   13 VSDEKDGWVPARILNESGD-SANVQLQTGAKR-KVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYT----WVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPRG 657
            V D+ + W+PAR++++ G  +  VQ++   K   +K+S  +PLWPL  SSL R+EDDLVM+D++NQ  MVH+L+ERY+ D IYT    WVGA+H+VLVSINPFK LPIY    + E+A+P+  RL PPH FA+AN A+++L  +  +QAILISGESGAGKTEATKQC +FLAEVAGS NNVEQR+L ANPVLE+FGNAKT+RNNNSSRFGRW EVHFD RG
Sbjct:   54 VRDDAEAWLPARVVSKLGQGTVKVQMRDSGKGLTLKQSDNQPLWPLTLSSLGRLEDDLVMLDSLNQAAMVHDLKERYKSDDIYTRVAVWVGASHTVLVSINPFKRLPIYGVNLMREFAEPAPNRLLPPHPFAVANGAYLRLRVDAENQAILISGESGAGKTEATKQCLSFLAEVAGSTNNVEQRVLSANPVLEAFGNAKTVRNNNSSRFGRWMEVHFDNRG 274          
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: A0A6S8C1X6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8C1X6_9STRA)

HSP 1 Score: 267 bits (683), Expect = 3.600e-79
Identity = 126/220 (57.27%), Postives = 173/220 (78.64%), Query Frame = 1
Query:   13 VSDEKDGWVPARILN-ESGDSANVQLQ-TGAKRKVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPRGQAS 666
            V DEK+ W+P R++  E+ D+  V+++  G K+  +    EPLWP++ SSL+R+EDD+V++D +N  +M+H+++ERY++D+IYTWVGA+ +VLVSINPFK LPIY    + E+A+P+  ++ PPH F++ANSA+++L  +   QA+LISGESGAGKTE TKQ  +FLAE+AGS  NVEQRIL ANPVLE+FGNAKT+RNNNSSRFGRW +VHFD RG  S
Sbjct:   41 VRDEKEVWLPGRVIKKETNDTLRVEIKGRGTKQLTRHVKNEPLWPVSLSSLNRLEDDMVLLDDLNDAMMIHDVKERYKKDQIYTWVGASQTVLVSINPFKRLPIYGIQMMNEFARPAPNKILPPHPFSVANSAYIRLRIQAQDQAMLISGESGAGKTETTKQILSFLAEIAGSSTNVEQRILSANPVLEAFGNAKTVRNNNSSRFGRWMQVHFDERGSIS 260          
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: D8M5G1_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M5G1_BLAHO)

HSP 1 Score: 221 bits (562), Expect = 1.430e-63
Identity = 107/219 (48.86%), Postives = 151/219 (68.95%), Query Frame = 1
Query:   13 VSDEKDGWVPARILNESGDSANVQLQTGAKRKVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPRGQASG 669
            ++DE +GWVP  + +  G +   + + G     K++     W    SSL  + DD+V+++  N+  +++ +R+RY   KIYTWVG+N ++L+S+NPF+ LP+YSP  I  +A P   RL PPH + IA SAF +++ +   Q+ILISGESGAGKTEATKQC  F+AEVAGS +++EQ++L  NPVLE+FGNAKT+RNNNSSRFG+W EVHF  R    G
Sbjct:  122 IADEAEGWVPVCVESAKGSTITGRREDGTIVTSKQNGGTVQW----SSLRELPDDVVLLEDCNEPSILYTVRKRYMEGKIYTWVGSNKTILLSVNPFQNLPLYSPEQISLHANPPPNRLLPPHVYDIAYSAFQEMSVDGTDQSILISGESGAGKTEATKQCLGFIAEVAGSDSSLEQKVLQTNPVLEAFGNAKTVRNNNSSRFGKWIEVHFSNRNHVCG 336          
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: A0A2R5GVT3_9STRA (Myosin-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVT3_9STRA)

HSP 1 Score: 216 bits (549), Expect = 5.350e-61
Identity = 110/221 (49.77%), Postives = 152/221 (68.78%), Query Frame = 1
Query:   34 WVPARILNESGDSANVQLQTGAKRKVK--------------RSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYR-RDKIYTWVGANHSVLVSINPFKMLP-IYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFD 648
            W PAR +NE   +  V + T A + +K              R  K PLWPL+ S L  +EDDLV  D +N+G++ + LRE Y  + +IYTWVGA HSVLV++NP+K +  +Y+P  + +Y +P   +  PPH F IA +++  L ++  +Q+ILISGESGAGKT ATK C ++LA+VAGS+++VE +IL ANPVLE+FGNAKT+RNNNSSRFG+W EV+FD
Sbjct:   63 WQPARTVNEDA-AGTVHMVTEAGKNIKIPKSRVMNGPETNGREQKVPLWPLHRSVLKHLEDDLVAADGVNEGIISYTLRELYENKSQIYTWVGAAHSVLVAVNPYKDIKGLYTPNQVRDYERPPPNKKLPPHVFGIAANSYNALLRDAQNQSILISGESGAGKTVATKHCLSWLADVAGSESHVEGKILSANPVLEAFGNAKTIRNNNSSRFGKWIEVYFD 282          
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: R1CMV8_EMIHU (Myosin motor domain-containing protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CMV8_EMIHU)

HSP 1 Score: 210 bits (535), Expect = 6.150e-61
Identity = 102/166 (61.45%), Postives = 128/166 (77.11%), Query Frame = 1
Query:  172 DDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPRGQASG 669
            DDLVM++ ++  L+ H L++RY  DKIYTWVGA+HSVL+SINPFK LPIY    +E +A P+  R   PHT+A+A  AF  +      QAILISGESGAGKTEATKQC +FLA+ AG+++ VEQRIL ANP+LE+FGNAKT+RN+NSSRFGRW EVHF+  G+  G
Sbjct:    1 DDLVMLEQLDAPLIAHCLQKRYAADKIYTWVGADHSVLISINPFKHLPIYGQYFLERFAAPAPNRDVEPHTYALARRAFRGMMDARRDQAILISGESGAGKTEATKQCLHFLADAAGTKSGVEQRILQANPILEAFGNAKTVRNDNSSRFGRWMEVHFESSGRVEG 166          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G548_ECTSI2.430e-13994.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSK5_9PHAE2.970e-13594.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C908_9STRA1.710e-10176.47P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S1U0Y1_9STRA6.740e-9866.67Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A7R9UA42_9STRA1.750e-8965.26Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
F0Y2B5_AURAN1.330e-8462.44Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A6S8C1X6_9STRA3.600e-7957.27Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
D8M5G1_BLAHO1.430e-6348.86Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
A0A2R5GVT3_9STRA5.350e-6149.77Myosin-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315... [more]
R1CMV8_EMIHU6.150e-6161.45Myosin motor domain-containing protein (Fragment) ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85132contigH-elongata_contig85132:459..2544 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score419.5
Seed ortholog evalue1e-114
Seed eggNOG ortholog2880.D7G548
KEGG koko:K21868
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0015629,GO:0016459,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0042623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0160@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMyosin head, motor domain
Ec32 orthologEc-00_008480.2
Exons3
Model size669
Cds size669
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85132.16105.1prot_H-elongata_contig85132.16105.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig85132 459..2544 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931254.978869-CDS-H-elongata_contig85132:458..8961622931254.978869-CDS-H-elongata_contig85132:458..896Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85132 459..896 +
1691679761.5397844-CDS-H-elongata_contig85132:458..8961691679761.5397844-CDS-H-elongata_contig85132:458..896Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85132 459..896 +
1622931254.997965-CDS-H-elongata_contig85132:1345..14351622931254.997965-CDS-H-elongata_contig85132:1345..1435Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85132 1346..1435 +
1691679761.5509121-CDS-H-elongata_contig85132:1345..14351691679761.5509121-CDS-H-elongata_contig85132:1345..1435Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85132 1346..1435 +
1622931255.0137818-CDS-H-elongata_contig85132:2403..25441622931255.0137818-CDS-H-elongata_contig85132:2403..2544Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85132 2404..2544 +
1691679761.560672-CDS-H-elongata_contig85132:2403..25441691679761.560672-CDS-H-elongata_contig85132:2403..2544Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85132 2404..2544 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig85132.16105.1

>prot_H-elongata_contig85132.16105.1 ID=prot_H-elongata_contig85132.16105.1|Name=mRNA_H-elongata_contig85132.16105.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=223bp
PYPQVSDEKDGWVPARILNESGDSANVQLQTGAKRKVKRSAKEPLWPLNH
SSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINP
FKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILI
SGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLR
NNNSSRFGRWTEVHFDPRGQASG
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mRNA from alignment at H-elongata_contig85132:459..2544+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig85132.16105.1 ID=mRNA_H-elongata_contig85132.16105.1|Name=mRNA_H-elongata_contig85132.16105.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2086bp|location=Sequence derived from alignment at H-elongata_contig85132:459..2544+ (Himanthalia elongata Himel1 dioecious)
CCCTACCCTCAGGTTAGTGACGAGAAGGACGGCTGGGTGCCAGCCCGCAT CCTGAACGAGTCGGGCGACTCCGCCAATGTCCAGCTGCAGACGGGTGCTA AGAGAAAGGTGAAGCGCTCGGCGAAGGAGCCCCTGTGGCCTCTCAACCAC TCCTCGCTGTCGAGGATCGAAGACGACCTCGTGATGGTGGATGCGATCAA CCAGGGGCTGATGGTGCACAACCTCCGCGAGCGGTACCGAAGGGACAAGA TCTATACCTGGGTAGGCGCCAACCATTCGGTACTGGTGTCCATCAACCCG TTCAAGATGCTACCGATCTACTCGCCGGCCACGATCGAGGAGTACGCCAA GCCTTCCGCGTACCGGCTGGATCCCCCGCACACTTTCGCCATCGCAAACT CGGCCTTCATGAAGCTCACGCAGGAGAACCACTCTCAGGTGTGTGATAAG ACTTGTTCATATGGTTGTCCTGCTTCTCTCTCTTTCCCCCCCCCCCTCTC TCTAAACAGCATGTTAGCACGTTATAAATAGTACAGCACGGCAAGTAAAT ACAATTGAGTACCTTGATTAGGGTTTTTTAGTTTACGACCCTCCTGTGTG TTTTTAGGGGTTACGAATCCATTTCCGACAGAAGGTAACATGTATGTTTT TCGCCGCCCAGTCTCGCACGCGCCCTGTGAAGAGGTCAAGAGTGTGGGAC GTATACTGGATTTTACTGGGAGTAAAAGCTAGAGGGTTGGAGGTCCGGGG TTGGGGAGAGAAGCGCGCGCGCGTTAGGCTTGGAAGGATCGATCGCTGTT GGATGCTCGGAAAGCCGTGTCATGGTACTCATTCTAGTGTGTGTTATGTG TTTGTTTATTTGTTTATTTTTCCCTTACCAATCCAAGGCCATCCTGATCT CCGGAGAATCTGGGGCGGGCAAGACGGAGGCGACGAAGCAGTGCTTCAAC TTTCTGGCGGAAGTCGCCGGATCCCAAGTAAGGAAGACTCCGGTCAGCGC TTCTTCTATTCATAGAGAGCCCCGAAAGAAATTCGAACGACGCGGTAGTA GCACTTTACAAAAAGCTCGGTGGCCGGAGAACCATCCCCAGCGTGTCCAA GATTGAGTATTGGGTCGATGATAATCGGGGCAGAGCCTCGAGGCGATTTT GTCGCGTCGGCACTTTGTACCGAAGATACTTGAAACTCCGGAAAGTTGTT ACAAACCCTCTTATGAATACACAATGATGTATAGGGTATACAGTATACAT CGCCTAGGACGTCAAAAGAGATTACATGCTGCTGTTATCCAGTTAACTCT GCTCTACATGTTGGTTGACCAGGTATAGGAGTACCAAACGTGCATCGTGT TAATAGACAATTTGTAGGGAGGCGTTAATCGGGTAGGATATGGTGGGTTG AGCCCTTGGGGCCACACAGGCTATGACAGAACTGACAACGTTGCAGCAGG TAATACGGTAGGTGGGATGCGTAACGCCTCCATAGCATGCTAAAAGGGAT AAGTTTACACAGTCTATAATACCACATCGTCACCAAGTGGGGACAATATA TATATATATATTATATATATATATAAACTGCAGTATTGATGATATATACG AATAGTATCAATTGCGGTGCAATCCTCCAAAAAAAGGAGCTCTATTCTGT TTTTTGTGTTTTTTTGCATTATGTCGTTTGACGGTGGTGTGATCCCCACT CGGCAAAAAAAGGAGACAAAAGACTACACGACACCATTCGAGGACGACTG AAAACGATTTTCTGCTGCGTGGTTCTCTCTCGAGTTTCAAAACACAGTTC ACGCACGCGCGTTGCACGCGTCCTCTTCAAGGCCTATAAAGTACCTAACA AAACCTATCCCCTTCCCTACACACAACCCCTATCCCCTTCCCCTTTTCTT CCGTGGGCTGTTTCTCTCTTTCTCTTTTTCTCTCTTAATATAAAGAATAA CGTGGAGCAGCGAATCCTACACGCCAACCCGGTGCTGGAGTCTTTCGGTA ACGCCAAGACGCTGAGGAACAACAACTCCTCCCGCTTCGGGCGTTGGACG GAGGTGCATTTTGATCCAAGAGGACAGGCGAGTGGC
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Coding sequence (CDS) from alignment at H-elongata_contig85132:459..2544+

>mRNA_H-elongata_contig85132.16105.1 ID=mRNA_H-elongata_contig85132.16105.1|Name=mRNA_H-elongata_contig85132.16105.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1338bp|location=Sequence derived from alignment at H-elongata_contig85132:459..2544+ (Himanthalia elongata Himel1 dioecious)
CCCTACCCTCAGGTTAGTGACGAGAAGGACGGCTGGGTGCCAGCCCGCAT
CCTGAACGAGTCGGGCGACTCCGCCAATGTCCAGCTGCAGACGGGTGCTA
AGAGAAAGGTGAAGCGCTCGGCGAAGGAGCCCCTGTGGCCTCTCAACCAC
TCCTCGCTGTCGAGGATCGAAGACGACCTCGTGATGGTGGATGCGATCAA
CCAGGGGCTGATGGTGCACAACCTCCGCGAGCGGTACCGAAGGGACAAGA
TCTATACCTGGGTAGGCGCCAACCATTCGGTACTGGTGTCCATCAACCCG
TTCAAGATGCTACCGATCTACTCGCCGGCCACGATCGAGGAGTACGCCAA
GCCTTCCGCGTACCGGCTGGATCCCCCGCACACTTTCGCCATCGCAAACT
CGGCCTTCATGAAGCTCACGCAGGAGAACCACTCTCAGCCCTACCCTCAG
GTTAGTGACGAGAAGGACGGCTGGGTGCCAGCCCGCATCCTGAACGAGTC
GGGCGACTCCGCCAATGTCCAGCTGCAGACGGGTGCTAAGAGAAAGGTGA
AGCGCTCGGCGAAGGAGCCCCTGTGGCCTCTCAACCACTCCTCGCTGTCG
AGGATCGAAGACGACCTCGTGATGGTGGATGCGATCAACCAGGGGCTGAT
GGTGCACAACCTCCGCGAGCGGTACCGAAGGGACAAGATCTATACCTGGG
TAGGCGCCAACCATTCGGTACTGGTGTCCATCAACCCGTTCAAGATGCTA
CCGATCTACTCGCCGGCCACGATCGAGGAGTACGCCAAGCCTTCCGCGTA
CCGGCTGGATCCCCCGCACACTTTCGCCATCGCAAACTCGGCCTTCATGA
AGCTCACGCAGGAGAACCACTCTCAGGCCATCCTGATCTCCGGAGAATCT
GGGGCGGGCAAGACGGAGGCGACGAAGCAGTGCTTCAACTTTCTGGCGGA
AGTCGCCGGATCCCAAGCCATCCTGATCTCCGGAGAATCTGGGGCGGGCA
AGACGGAGGCGACGAAGCAGTGCTTCAACTTTCTGGCGGAAGTCGCCGGA
TCCCAAAATAACGTGGAGCAGCGAATCCTACACGCCAACCCGGTGCTGGA
GTCTTTCGGTAACGCCAAGACGCTGAGGAACAACAACTCCTCCCGCTTCG
GGCGTTGGACGGAGGTGCATTTTGATCCAAGAGGACAGGCGAGTGGCAAT
AACGTGGAGCAGCGAATCCTACACGCCAACCCGGTGCTGGAGTCTTTCGG
TAACGCCAAGACGCTGAGGAACAACAACTCCTCCCGCTTCGGGCGTTGGA
CGGAGGTGCATTTTGATCCAAGAGGACAGGCGAGTGGC
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