mRNA_H-elongata_contig85132.16105.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: D7G548_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G548_ECTSI) HSP 1 Score: 417 bits (1073), Expect = 2.430e-139 Identity = 207/219 (94.52%), Postives = 211/219 (96.35%), Query Frame = 1
Query: 13 VSDEKDGWVPARILNESGDSANVQLQTGAKRKVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPRGQASG 669
VSDEKDGWVPARIL ESGDSANVQLQ G+K+ VKRSAKEPLWPLNHSSLSR+EDDLVMVDAINQGLMVHNLRERYRRD IYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQEN SQAILISGESGAGKTEATKQCFNFLAEVAGSQN VEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDP+GQ G
Sbjct: 2 VSDEKDGWVPARILKESGDSANVQLQNGSKKTVKRSAKEPLWPLNHSSLSRVEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQNAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPKGQVCG 220
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: A0A6H5KSK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK5_9PHAE) HSP 1 Score: 421 bits (1082), Expect = 2.970e-135 Identity = 209/222 (94.14%), Postives = 214/222 (96.40%), Query Frame = 1
Query: 1 PYPQVSDEKDGWVPARILNESGDSANVQLQTGAKRKVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPRGQAS 666
P+ VSDEKDGWVPARIL ESGDSANVQLQ G+K+ VKRSAKEPLWPLNHSSLSR+EDDLVMVDAINQGLMVHNLRERYRRD IYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQEN SQAILISGESGAGKTEATKQCFNFLAEVAGSQN VEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDP+GQAS
Sbjct: 55 PWAWVSDEKDGWVPARILKESGDSANVQLQNGSKKTVKRSAKEPLWPLNHSSLSRVEDDLVMVDAINQGLMVHNLRERYRRDLIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENVSQAILISGESGAGKTEATKQCFNFLAEVAGSQNAVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPKGQAS 276
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: A0A836C908_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C908_9STRA) HSP 1 Score: 330 bits (847), Expect = 1.710e-101 Identity = 169/221 (76.47%), Postives = 186/221 (84.16%), Query Frame = 1
Query: 13 VSDEKDGWVPARILNES-GDSA-NVQLQTGAKRKVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPRGQASG 669
V+DEK+G+ PAR+L + GD+ NVQLQ+GAKR VK EPLWPL SSL+R+EDDLVMVD IN GLM H LR RYRRD IYTWVGANHSVLVSINPFK LPIY PA I EYA+PSAYRLDPPHTFAIANSAF +L E SQA+LISGESGAGKTEATKQCF+FLAEVAGS + VEQRIL ANPVLE+FGNAKTLRNNNSSRFGRWTEVHFD + + G
Sbjct: 165 VTDEKEGYAPARVLKGAPGDTTLNVQLQSGAKRSVKAGKGEPLWPLKPSSLTRVEDDLVMVDDINTGLMAHCLRARYRRDAIYTWVGANHSVLVSINPFKQLPIYGPAQIAEYARPSAYRLDPPHTFAIANSAFRRLALEGASQAVLISGESGAGKTEATKQCFSFLAEVAGSADAVEQRILCANPVLEAFGNAKTLRNNNSSRFGRWTEVHFDAQSRICG 385
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: A0A7S1U0Y1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0Y1_9STRA) HSP 1 Score: 296 bits (759), Expect = 6.740e-98 Identity = 142/213 (66.67%), Postives = 174/213 (81.69%), Query Frame = 1
Query: 13 VSDEKDGWVPARILNESGDSANVQLQTGAKRKVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDP 651
VSD+K W PAR+ + + A+VQL +G + + +SA EPLWPL SSL+ +EDDLVMVD +NQGLM+H LRERY +DKIYTWVGANH+VL+S+NPFK LPIYS T+ E++KP A R+ PPH FAIA++AF+ L +QA+LISGESGAGKTEATKQ +LAE+AGS+NNVEQ+IL ANPVLE+FGNAKTLRNNNSSRFGRW EVHF+P
Sbjct: 67 VSDQKVTWAPARVTKRTPEGAHVQLSSGRAKVIVKSAAEPLWPLKKSSLNHLEDDLVMVDDLNQGLMMHCLRERYGQDKIYTWVGANHTVLISVNPFKQLPIYSVETMNEFSKPGANRVPPPHVFAIAHNAFLALKIGARNQAVLISGESGAGKTEATKQVLAYLAEIAGSENNVEQKILSANPVLEAFGNAKTLRNNNSSRFGRWMEVHFEP 279
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: A0A7R9UA42_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA42_9STRA) HSP 1 Score: 290 bits (741), Expect = 1.750e-89 Identity = 139/213 (65.26%), Postives = 167/213 (78.40%), Query Frame = 1
Query: 13 VSDEKDGWVPARILNESGDSANVQLQTGAKRKVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDP 651
VSD K W PA+++ ++ VQL G + + +S EPLWPL SSL+ +E+DLVMVD +NQGLM+H LRERY RDKIYTWVGANH+VL+S+NPFK LPIYS T+ E+AKP A R+ PH FAIA +F + + +QAILISGESGAGKTEATKQC +LAE+AGS NNVEQ+IL ANPVLE+FGNAKTLRNNNSSRFGRW EVHF+P
Sbjct: 72 VSDPKVAWAPAKVVRKTSSGVEVQLGNGRPKVLTKSKAEPLWPLKKSSLNHLEEDLVMVDDLNQGLMMHCLRERYARDKIYTWVGANHTVLISVNPFKQLPIYSIETMSEFAKPGANRVQKPHVFAIAQDSFTHMKIQARNQAILISGESGAGKTEATKQCLAYLAEMAGSDNNVEQKILSANPVLEAFGNAKTLRNNNSSRFGRWMEVHFEP 284
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: F0Y2B5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2B5_AURAN) HSP 1 Score: 276 bits (707), Expect = 1.330e-84 Identity = 138/221 (62.44%), Postives = 174/221 (78.73%), Query Frame = 1
Query: 13 VSDEKDGWVPARILNESGD-SANVQLQTGAKR-KVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYT----WVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPRG 657
V D+ + W+PAR++++ G + VQ++ K +K+S +PLWPL SSL R+EDDLVM+D++NQ MVH+L+ERY+ D IYT WVGA+H+VLVSINPFK LPIY + E+A+P+ RL PPH FA+AN A+++L + +QAILISGESGAGKTEATKQC +FLAEVAGS NNVEQR+L ANPVLE+FGNAKT+RNNNSSRFGRW EVHFD RG
Sbjct: 54 VRDDAEAWLPARVVSKLGQGTVKVQMRDSGKGLTLKQSDNQPLWPLTLSSLGRLEDDLVMLDSLNQAAMVHDLKERYKSDDIYTRVAVWVGASHTVLVSINPFKRLPIYGVNLMREFAEPAPNRLLPPHPFAVANGAYLRLRVDAENQAILISGESGAGKTEATKQCLSFLAEVAGSTNNVEQRVLSANPVLEAFGNAKTVRNNNSSRFGRWMEVHFDNRG 274
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: A0A6S8C1X6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8C1X6_9STRA) HSP 1 Score: 267 bits (683), Expect = 3.600e-79 Identity = 126/220 (57.27%), Postives = 173/220 (78.64%), Query Frame = 1
Query: 13 VSDEKDGWVPARILN-ESGDSANVQLQ-TGAKRKVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPRGQAS 666
V DEK+ W+P R++ E+ D+ V+++ G K+ + EPLWP++ SSL+R+EDD+V++D +N +M+H+++ERY++D+IYTWVGA+ +VLVSINPFK LPIY + E+A+P+ ++ PPH F++ANSA+++L + QA+LISGESGAGKTE TKQ +FLAE+AGS NVEQRIL ANPVLE+FGNAKT+RNNNSSRFGRW +VHFD RG S
Sbjct: 41 VRDEKEVWLPGRVIKKETNDTLRVEIKGRGTKQLTRHVKNEPLWPVSLSSLNRLEDDMVLLDDLNDAMMIHDVKERYKKDQIYTWVGASQTVLVSINPFKRLPIYGIQMMNEFARPAPNKILPPHPFSVANSAYIRLRIQAQDQAMLISGESGAGKTETTKQILSFLAEIAGSSTNVEQRILSANPVLEAFGNAKTVRNNNSSRFGRWMQVHFDERGSIS 260
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: D8M5G1_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M5G1_BLAHO) HSP 1 Score: 221 bits (562), Expect = 1.430e-63 Identity = 107/219 (48.86%), Postives = 151/219 (68.95%), Query Frame = 1
Query: 13 VSDEKDGWVPARILNESGDSANVQLQTGAKRKVKRSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPRGQASG 669
++DE +GWVP + + G + + + G K++ W SSL + DD+V+++ N+ +++ +R+RY KIYTWVG+N ++L+S+NPF+ LP+YSP I +A P RL PPH + IA SAF +++ + Q+ILISGESGAGKTEATKQC F+AEVAGS +++EQ++L NPVLE+FGNAKT+RNNNSSRFG+W EVHF R G
Sbjct: 122 IADEAEGWVPVCVESAKGSTITGRREDGTIVTSKQNGGTVQW----SSLRELPDDVVLLEDCNEPSILYTVRKRYMEGKIYTWVGSNKTILLSVNPFQNLPLYSPEQISLHANPPPNRLLPPHVYDIAYSAFQEMSVDGTDQSILISGESGAGKTEATKQCLGFIAEVAGSDSSLEQKVLQTNPVLEAFGNAKTVRNNNSSRFGKWIEVHFSNRNHVCG 336
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: A0A2R5GVT3_9STRA (Myosin-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVT3_9STRA) HSP 1 Score: 216 bits (549), Expect = 5.350e-61 Identity = 110/221 (49.77%), Postives = 152/221 (68.78%), Query Frame = 1
Query: 34 WVPARILNESGDSANVQLQTGAKRKVK--------------RSAKEPLWPLNHSSLSRIEDDLVMVDAINQGLMVHNLRERYR-RDKIYTWVGANHSVLVSINPFKMLP-IYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFD 648
W PAR +NE + V + T A + +K R K PLWPL+ S L +EDDLV D +N+G++ + LRE Y + +IYTWVGA HSVLV++NP+K + +Y+P + +Y +P + PPH F IA +++ L ++ +Q+ILISGESGAGKT ATK C ++LA+VAGS+++VE +IL ANPVLE+FGNAKT+RNNNSSRFG+W EV+FD
Sbjct: 63 WQPARTVNEDA-AGTVHMVTEAGKNIKIPKSRVMNGPETNGREQKVPLWPLHRSVLKHLEDDLVAADGVNEGIISYTLRELYENKSQIYTWVGAAHSVLVAVNPYKDIKGLYTPNQVRDYERPPPNKKLPPHVFGIAANSYNALLRDAQNQSILISGESGAGKTVATKHCLSWLADVAGSESHVEGKILSANPVLEAFGNAKTIRNNNSSRFGKWIEVYFD 282
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Match: R1CMV8_EMIHU (Myosin motor domain-containing protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CMV8_EMIHU) HSP 1 Score: 210 bits (535), Expect = 6.150e-61 Identity = 102/166 (61.45%), Postives = 128/166 (77.11%), Query Frame = 1
Query: 172 DDLVMVDAINQGLMVHNLRERYRRDKIYTWVGANHSVLVSINPFKMLPIYSPATIEEYAKPSAYRLDPPHTFAIANSAFMKLTQENHSQAILISGESGAGKTEATKQCFNFLAEVAGSQNNVEQRILHANPVLESFGNAKTLRNNNSSRFGRWTEVHFDPRGQASG 669
DDLVM++ ++ L+ H L++RY DKIYTWVGA+HSVL+SINPFK LPIY +E +A P+ R PHT+A+A AF + QAILISGESGAGKTEATKQC +FLA+ AG+++ VEQRIL ANP+LE+FGNAKT+RN+NSSRFGRW EVHF+ G+ G
Sbjct: 1 DDLVMLEQLDAPLIAHCLQKRYAADKIYTWVGADHSVLISINPFKHLPIYGQYFLERFAAPAPNRDVEPHTYALARRAFRGMMDARRDQAILISGESGAGKTEATKQCLHFLADAAGTKSGVEQRILQANPILEAFGNAKTVRNDNSSRFGRWMEVHFESSGRVEG 166 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85132.16105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig85132.16105.1 >prot_H-elongata_contig85132.16105.1 ID=prot_H-elongata_contig85132.16105.1|Name=mRNA_H-elongata_contig85132.16105.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=223bp PYPQVSDEKDGWVPARILNESGDSANVQLQTGAKRKVKRSAKEPLWPLNHback to top mRNA from alignment at H-elongata_contig85132:459..2544+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig85132.16105.1 ID=mRNA_H-elongata_contig85132.16105.1|Name=mRNA_H-elongata_contig85132.16105.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2086bp|location=Sequence derived from alignment at H-elongata_contig85132:459..2544+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig85132:459..2544+ >mRNA_H-elongata_contig85132.16105.1 ID=mRNA_H-elongata_contig85132.16105.1|Name=mRNA_H-elongata_contig85132.16105.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1338bp|location=Sequence derived from alignment at H-elongata_contig85132:459..2544+ (Himanthalia elongata Himel1 dioecious)back to top |