mRNA_H-elongata_contig85083.16101.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig85083.16101.1 vs. uniprot
Match: A0A6H5L1Z6_9PHAE (Ccc protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z6_9PHAE) HSP 1 Score: 293 bits (751), Expect = 3.400e-91 Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 1
Query: 1 YACVNLSCFVLSILQSPGFRPRWKHYNWFTALSGFALCLAIMLVVSWKAAVSSIFLACALLFYIKYQNATRDWGDTLVGFRFQLARDMLLSLSYKEVHPKNWRPQLLVFCKIDAYGNPTVPGLLSLAGQMKMGRGLLMSVGLLEGNMVE 447
YACVNLSCFVLSILQSPGFRP+WKHYNW TALSGF LCLAIMLVVSW+ AVSSIFLACALLFYIKYQNATRDWGDTLVGFRFQLARDMLLSLSYK+VHPKNWRPQLLVFCKIDAYGNPTVPGLLSLAGQMKMGRGLLMSVGLLEG+MVE
Sbjct: 474 YACVNLSCFVLSILQSPGFRPKWKHYNWLTALSGFILCLAIMLVVSWRVAVSSIFLACALLFYIKYQNATRDWGDTLVGFRFQLARDMLLSLSYKDVHPKNWRPQLLVFCKIDAYGNPTVPGLLSLAGQMKMGRGLLMSVGLLEGDMVE 622
BLAST of mRNA_H-elongata_contig85083.16101.1 vs. uniprot
Match: D7FM44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM44_ECTSI) HSP 1 Score: 273 bits (698), Expect = 7.790e-85 Identity = 143/194 (73.71%), Postives = 146/194 (75.26%), Query Frame = 1
Query: 1 YACVNLSCFVLSILQSPGFRPRWKHYNWFTALSGFALCLAIMLVVSW---------------------------------------------KAAVSSIFLACALLFYIKYQNATRDWGDTLVGFRFQLARDMLLSLSYKEVHPKNWRPQLLVFCKIDAYGNPTVPGLLSLAGQMKMGRGLLMSVGLLEGNMVE 447
YACVNLSCFVLSILQSPGFRP+WKHYNW TALSGF LCLAIMLVVSW K AVSSIFLACALLFYIKYQNATRDWGDTLVGFRFQLARDMLLSLSYK+VHPKNWRPQLLVFCKIDAYGNPTVPGLLSLAGQMKMGRGLLMSVGLLEG+MVE
Sbjct: 235 YACVNLSCFVLSILQSPGFRPKWKHYNWLTALSGFILCLAIMLVVSWRRPGLHDGFRLAILGLGVVACDTGGWHLCRREEGGDRQKAKSLQMKVAVSSIFLACALLFYIKYQNATRDWGDTLVGFRFQLARDMLLSLSYKDVHPKNWRPQLLVFCKIDAYGNPTVPGLLSLAGQMKMGRGLLMSVGLLEGDMVE 428
BLAST of mRNA_H-elongata_contig85083.16101.1 vs. uniprot
Match: A0A835Z2U9_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2U9_9STRA) HSP 1 Score: 213 bits (541), Expect = 2.770e-61 Identity = 103/147 (70.07%), Postives = 125/147 (85.03%), Query Frame = 1
Query: 1 YACVNLSCFVLSILQSPGFRPRWKHYNWFTALSGFALCLAIMLVVSWKAAVSSIFLACALLFYIKYQNATRDWGDTLVGFRFQLARDMLLSLSYKE-VHPKNWRPQLLVFCKIDAYGNPTVPGLLSLAGQMKMGRGLLMSVGLLEGN 438
YA VNLSC+VL +LQSPGFRP+W++Y W+TAL G A+C+A+ML++SW+AAV I A ALLFYIKYQNATRDWGDTL GFR+Q+ARD+LLSLS K+ +H KNWRPQ+LV C ID GNP VP LLSLAGQMK GRGLLM+V L++G+
Sbjct: 450 YASVNLSCYVLCVLQSPGFRPQWRYYAWWTALGGVAMCVALMLMISWEAAVVLITAAFALLFYIKYQNATRDWGDTLTGFRYQVARDVLLSLSEKQTMHAKNWRPQVLVLCAIDEGGNPLVPELLSLAGQMKKGRGLLMAVALIKGD 596
BLAST of mRNA_H-elongata_contig85083.16101.1 vs. uniprot
Match: A0A835Z753_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z753_9STRA) HSP 1 Score: 204 bits (519), Expect = 2.540e-58 Identity = 95/147 (64.63%), Postives = 122/147 (82.99%), Query Frame = 1
Query: 1 YACVNLSCFVLSILQSPGFRPRWKHYNWFTALSGFALCLAIMLVVSWKAAVSSIFLACALLFYIKYQNATRDWGDTLVGFRFQLARDMLLSLS-YKEVHPKNWRPQLLVFCKIDAYGNPTVPGLLSLAGQMKMGRGLLMSVGLLEGN 438
Y VNLSC+VL +L+SPGFRP+W++Y+W TAL+G +C+ +ML++SW+AAV S +A ALLFYIKYQNATRDWGD+L GFR+Q+ARDMLLSL ++ +H KNWRPQ+LV C ID GNPTVP LL+LA QMK GRGLLM+ L++G+
Sbjct: 347 YGSVNLSCYVLCVLKSPGFRPQWRYYSWGTALAGVVMCMLLMLIISWQAAVLSSIMAFALLFYIKYQNATRDWGDSLTGFRYQVARDMLLSLKGHQTMHAKNWRPQILVLCNIDDGGNPTVPELLALAAQMKKGRGLLMAAALIKGD 493
BLAST of mRNA_H-elongata_contig85083.16101.1 vs. uniprot
Match: A0A7S3JVD0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVD0_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.200e-39 Identity = 69/146 (47.26%), Postives = 101/146 (69.18%), Query Frame = 1
Query: 1 YACVNLSCFVLSILQSPGFRPRWKHYNWFTALSGFALCLAIMLVVSWKAAVSSIFLACALLFYIKYQNATRDWGDTLVGFRFQLARDMLLSLSYKEV--HPKNWRPQLLVFCKIDAYGNPTVPGLLSLAGQMKMGRGLLMSVGLLE 432
YA VNL+CF L+ L+SPGFRP WK+++W +AL GF CL +M +SW A+ ++ +A ++ Y++ + +DWGD++ G RFQ+ARD L++LS + H KNWRPQLLV K+D NP P LL +A +K G+GLLM+ L++
Sbjct: 47 YATVNLACFFLAYLKSPGFRPTWKYFHWSSALLGFVWCLGLMFAISWYLALVALVIAASVAAYVRKEGVNKDWGDSVAGLRFQIARDQLIALSERSTFYHAKNWRPQLLVMVKLDYKFNPERPELLEIAASLKKGQGLLMAHALID 192
BLAST of mRNA_H-elongata_contig85083.16101.1 vs. uniprot
Match: A0A7R9YE43_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE43_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.050e-38 Identity = 68/147 (46.26%), Postives = 103/147 (70.07%), Query Frame = 1
Query: 1 YACVNLSCFVLSILQSPGFRPRWKHYNWFTALSGFALCLAIMLVVSWKAAVSSIFLACALLFYIKYQNATRDWGDTLVGFRFQLARDMLLSL-SYKEVHPKNWRPQLLVFCKIDAYGNPTVPGLLSLAGQMKMGRGLLMSVGLLEGN 438
YA VN SCFVLSIL++PG+RP +++Y+W TAL+G C+ +ML++SW A+ + + LL YI+ Q+A R+WGD GFR + RD +L+L S E+H KNWRPQ+++ ++ YG+P+ P ++ AGQ+K GRGL++ L G+
Sbjct: 455 YAAVNFSCFVLSILKAPGWRPTFRYYHWGTALAGTIWCVVLMLIISWWVAIIVMAVGAMLLLYIRTQDAKRNWGDAARGFRLSIVRDQMLALDSRSEMHAKNWRPQIMLVADVNEYGHPSRPEIIRFAGQLKKGRGLILVNAFLAGD 601
BLAST of mRNA_H-elongata_contig85083.16101.1 vs. uniprot
Match: A0A8J2SMD4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMD4_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.820e-37 Identity = 67/146 (45.89%), Postives = 98/146 (67.12%), Query Frame = 1
Query: 1 YACVNLSCFVLSILQSPGFRPRWKHYNWFTALSGFALCLAIMLVVSWKAAVSSIFLACALLFYIKYQNATRDWGDTLVGFRFQLARDMLLSLSYKEV--HPKNWRPQLLVFCKIDAYGNPTVPGLLSLAGQMKMGRGLLMSVGLLE 432
YA +N+SCF ++ L +PGFRP W+ ++W +AL G LCL +M +SW ++ ++ + FY++ + + DWGD GFRFQ+ARD LL+L+ + H KNWRPQ+LV C+ D NP P LL+LAG +K GRGLLM+ L++
Sbjct: 591 YATINVSCFAVAFLGTPGFRPTWRCFHWSSALLGCLLCLGLMFAISWLYSLVALAFGAGVGFYVRSRRVSTDWGDAGAGFRFQVARDQLLALTERSTFHHAKNWRPQILVLCRCDGRFNPVKPELLALAGLLKKGRGLLMAHALID 736
BLAST of mRNA_H-elongata_contig85083.16101.1 vs. uniprot
Match: A0A6P8I0B0_ACTTE (solute carrier family 12 member 6-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I0B0_ACTTE) HSP 1 Score: 137 bits (346), Expect = 8.960e-35 Identity = 65/146 (44.52%), Postives = 97/146 (66.44%), Query Frame = 1
Query: 1 YACVNLSCFVLSILQSPGFRPRWKHYNWFTALSGFALCLAIMLVVSWKAAVSSIFLACALLFYIKYQNATRDWGDTLVGFRFQLARDMLLSLSYKEVHPKNWRPQLLVFCKIDAYGNPTVPGLLSLAGQMKMGRGLLMSVGLLEGN 438
YA VNL+C V S+L++P +RPR+K+Y+WFT+ G LC+A+M + SW A+ ++ +A A+ YI++Q A ++WGD + G AR L+ L H KNWRP++L+ CK++ P P LLSLA Q+K GRGL + +LEG+
Sbjct: 558 YAFVNLACVVQSLLKTPNWRPRFKYYHWFTSFLGVCLCVALMFISSWYYALVAMIIAAAVYKYIEFQGAKKEWGDGIRGLNLSAARYSLMRLEEGPTHTKNWRPEILILCKLNEGYQPQSPRLLSLASQLKKGRGLSVVGSVLEGS 703
BLAST of mRNA_H-elongata_contig85083.16101.1 vs. uniprot
Match: A0A087TPI8_STEMI (Solute carrier family 12 member 4 (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087TPI8_STEMI) HSP 1 Score: 125 bits (315), Expect = 5.060e-34 Identity = 61/145 (42.07%), Postives = 90/145 (62.07%), Query Frame = 1
Query: 1 YACVNLSCFVLSILQSPGFRPRWKHYNWFTALSGFALCLAIMLVVSWKAAVSSIFLACALLFYIKYQNATRDWGDTLVGFRFQLARDMLLSLSYKEVHPKNWRPQLLVFCKIDAYGNPTVPGLLSLAGQMKMGRGLLMSVGLLEG 435
Y VNL+C + S+L +P +RPR+K+Y+W +++G LCL +M + SW A+ +I +A + YI+Y A ++WGD + G AR LL L H KNWRPQ+L+ CK+D NP P + S A Q+K G+GL + +LEG
Sbjct: 3 YMFVNLACALQSLLHTPNWRPRFKYYHWSLSMAGSILCLVVMFLSSWYYALIAIAIAGCVYKYIEYCGAEKEWGDGIRGLALSAARYSLLRLEEGPPHTKNWRPQVLILCKLDEELNPKYPRMFSFASQLKAGKGLTIVCSVLEG 147
BLAST of mRNA_H-elongata_contig85083.16101.1 vs. uniprot
Match: A0A6S7H269_PARCT (Solute carrier family 12 member 4 isoform X3 n=2 Tax=Alcyonacea TaxID=40677 RepID=A0A6S7H269_PARCT) HSP 1 Score: 135 bits (340), Expect = 5.730e-34 Identity = 65/149 (43.62%), Postives = 95/149 (63.76%), Query Frame = 1
Query: 1 YACVNLSCFVLSILQSPGFRPRWKHYNWFTALSGFALCLAIMLVVSWKAAVSSIFLACALLFYIKYQNATRDWGDTLVGFRFQLARDMLLSLSYKEVHPKNWRPQLLVFCKIDAYGNPTVPGLLSLAGQMKMGRGLLMSVGLLEGNMVE 447
Y VNL+C + S+LQ+P +RPR++ Y+WF +L G LCL +M V SW A+ ++ LA + YI++Q A ++WGD + G AR LL L VH KNWRPQLLV CK++ P L + GQ+K GRGL ++ +L+G+++E
Sbjct: 548 YGFVNLACVLQSLLQTPNWRPRFQFYHWFASLIGLCLCLTLMFVSSWYYALVALILAAGIYKYIEFQGAKKEWGDGIRGLALSAARYGLLRLEEGAVHTKNWRPQLLVLCKLNEDLKPKTDNLFAFVGQLKAGRGLTIAASVLKGDILE 696 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85083.16101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig85083.16101.1 >prot_H-elongata_contig85083.16101.1 ID=prot_H-elongata_contig85083.16101.1|Name=mRNA_H-elongata_contig85083.16101.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp YACVNLSCFVLSILQSPGFRPRWKHYNWFTALSGFALCLAIMLVVSWKAAback to top mRNA from alignment at H-elongata_contig85083:182..2614- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig85083.16101.1 ID=mRNA_H-elongata_contig85083.16101.1|Name=mRNA_H-elongata_contig85083.16101.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2433bp|location=Sequence derived from alignment at H-elongata_contig85083:182..2614- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig85083:182..2614- >mRNA_H-elongata_contig85083.16101.1 ID=mRNA_H-elongata_contig85083.16101.1|Name=mRNA_H-elongata_contig85083.16101.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=912bp|location=Sequence derived from alignment at H-elongata_contig85083:182..2614- (Himanthalia elongata Himel1 dioecious)back to top |