mRNA_H-elongata_contig8492.16089.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8492.16089.1 vs. uniprot
Match: D7FHW7_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHW7_ECTSI) HSP 1 Score: 235 bits (600), Expect = 1.470e-68 Identity = 113/139 (81.29%), Postives = 128/139 (92.09%), Query Frame = 2
Query: 467 QNPDSPGERDRIEAMGGFVSDPVEAGASARVWLDETKTKIGLAMARSIGDLAVERVGVIALPEVTEYELTPQDEFLILASDGIWEFITNQEATEVVHSLLEKGEDAADACKGLMELANRRWSEMVGDYRDDITATIVRL 883
QNPDSPGER+RIEAMGGFVSDP EAGASARVWLD T+T +GLAMARSIGDLAV+RVGVIALPEVTEY L P+DEFL+LASDG+WEFI NQEA+E+V ++GEDAA ACKGLME+ANRRWS+MVGDYRDDITAT+V+L
Sbjct: 313 QNPDSPGERERIEAMGGFVSDPEEAGASARVWLDATRTLVGLAMARSIGDLAVKRVGVIALPEVTEYVLQPEDEFLVLASDGVWEFIDNQEASEIVQGFFDRGEDAAGACKGLMEMANRRWSDMVGDYRDDITATVVKL 451
BLAST of mRNA_H-elongata_contig8492.16089.1 vs. uniprot
Match: F0Y735_AURAN (PPM-type phosphatase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y735_AURAN) HSP 1 Score: 168 bits (426), Expect = 3.190e-47 Identity = 81/140 (57.86%), Postives = 109/140 (77.86%), Query Frame = 2
Query: 470 NPDSPGERDRIEAMGGFVSDPVEAGASARVWLDETKTKIGLAMARSIGDLAVERVGVIALPEVTEYELTPQDEFLILASDGIWEFITNQEATEVVHSLLEKGED--AADACKGLMELANRRWSEMVGDYRDDITATIVRL 883
NP++PGER+RI GGFVSDP E G SARVWLD T++GLAM RSIGD AV+R+GVIA PEV +E++ +D+FL++A+DG+WEFI N+EA E+V + G + A DACK L++LA +RW ++ GDYRDDITA +++L
Sbjct: 128 NPNAPGERERIVKAGGFVSDPPEEGLSARVWLDRKCTQVGLAMGRSIGDNAVKRIGVIAEPEVRTHEVSDRDDFLVMATDGVWEFIPNEEAIELVGQFFDSGAENAAKDACKSLIDLAVKRWRDIEGDYRDDITAIVMKL 267
BLAST of mRNA_H-elongata_contig8492.16089.1 vs. uniprot
Match: A0A7S1YT18_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YT18_9STRA) HSP 1 Score: 169 bits (428), Expect = 1.680e-44 Identity = 85/139 (61.15%), Postives = 107/139 (76.98%), Query Frame = 2
Query: 467 QNPDSPGERDRIEAMGGFVSDPVEAGASARVWLDETKTKIGLAMARSIGDLAVERVGVIALPEVTEYELTPQDEFLILASDGIWEFITNQEATEVVHSLLEKGEDAADACKGLMELANRRWSEMVGDYRDDITATIVRL 883
QNPDSPGE++RI GG+VS P E G SARVWLD + T+IGLAMARSIGD AV+ VGVIA P VT++ LT QDEF+ILA+DG+WEFI+++EA +V L KGE + AC+ L+E A +W E GDYRDDITA +++L
Sbjct: 463 QNPDSPGEQERIIQNGGYVSPPPEEGLSARVWLDSSCTQIGLAMARSIGDHAVKPVGVIAEPVVTQHSLTTQDEFMILATDGVWEFISSEEAVNIVGKRLLKGEGSTKACQVLIEAAAAKWHEYEGDYRDDITALVIQL 601
BLAST of mRNA_H-elongata_contig8492.16089.1 vs. uniprot
Match: A0A835Z8U8_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U8_9STRA) HSP 1 Score: 165 bits (418), Expect = 4.310e-44 Identity = 85/139 (61.15%), Postives = 105/139 (75.54%), Query Frame = 2
Query: 467 QNPDSPGERDRIEAMGGFVSDPVEAGASARVWLDETKTKIGLAMARSIGDLAVERVGVIALPEVTEYELTPQDEFLILASDGIWEFITNQEATEVVHSLLEKGEDAADACKGLMELANRRWSEMVGDYRDDITATIVRL 883
QNP+SP E+ RIEA GGFVS P E G SARVWLD T+IGLAMARSIGD AV+ +GVIA PEVTE+ L P D+FLILASDG+WEFI++QEA E + + L+KG A + L+E + +RW E+ GDYRDD T ++RL
Sbjct: 325 QNPNSPAEQQRIEAAGGFVSPPPEPGLSARVWLDREMTQIGLAMARSIGDHAVKGIGVIAEPEVTEHFLGPDDQFLILASDGVWEFISSQEAVETIAANLDKG--CMRATQALIEASAQRWREVEGDYRDDCTCEVIRL 461
BLAST of mRNA_H-elongata_contig8492.16089.1 vs. uniprot
Match: A0A7S3NK78_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK78_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.640e-43 Identity = 81/138 (58.70%), Postives = 108/138 (78.26%), Query Frame = 2
Query: 470 NPDSPGERDRIEAMGGFVSDPVEAGASARVWLDETKTKIGLAMARSIGDLAVERVGVIALPEVTEYELTPQDEFLILASDGIWEFITNQEATEVVHSLLEKGEDAADACKGLMELANRRWSEMVGDYRDDITATIVRL 883
NPD+PGER+RI A GGFVSDP G SARVWLD T++GLAMARSIGD AV++VGVIA PEV ++ ++ D F+ILASDG+WEFI++QEA ++V+ L++ + A+ ACK L+E + + W + GDYRDDITA ++RL
Sbjct: 349 NPDAPGERERITAAGGFVSDPPGEGLSARVWLDRNMTRVGLAMARSIGDNAVKKVGVIAEPEVRKHLISENDLFMILASDGVWEFISSQEAVQLVYDSLQQTKSASAACKLLIERSIQCWKDNEGDYRDDITALVMRL 486
BLAST of mRNA_H-elongata_contig8492.16089.1 vs. uniprot
Match: K0RB05_THAOC (PPM-type phosphatase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RB05_THAOC) HSP 1 Score: 164 bits (416), Expect = 3.400e-43 Identity = 80/139 (57.55%), Postives = 105/139 (75.54%), Query Frame = 2
Query: 467 QNPDSPGERDRIEAMGGFVSDPVEAGASARVWLDETKTKIGLAMARSIGDLAVERVGVIALPEVTEYELTPQDEFLILASDGIWEFITNQEATEVVHSLLEKGEDAADACKGLMELANRRWSEMVGDYRDDITATIVRL 883
QNPDSPGE++RI + GGFVS P E G S+RVWLD +T++GLAMARSIGD AV+ VGVIA P V + + P DEF+I+A+DG+WEFI + A E+V L KGE A+ AC+ L++ A RRW E+ G YRDDITA ++++
Sbjct: 406 QNPDSPGEKERILSSGGFVSPPPEPGLSSRVWLDPEQTQVGLAMARSIGDHAVKGVGVIAEPVVETHRIVPGDEFVIMATDGVWEFIDSDAAVEIVADRLRKGEGASVACEALIDAATRRWREVEGCYRDDITAIVIQM 544
BLAST of mRNA_H-elongata_contig8492.16089.1 vs. uniprot
Match: A0A7S3L068_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L068_9STRA) HSP 1 Score: 161 bits (407), Expect = 4.830e-42 Identity = 83/139 (59.71%), Postives = 104/139 (74.82%), Query Frame = 2
Query: 467 QNPDSPGERDRIEAMGGFVSDPVEAGASARVWLDETKTKIGLAMARSIGDLAVERVGVIALPEVTEYELTPQDEFLILASDGIWEFITNQEATEVVHSLLEKGEDAADACKGLMELANRRWSEMVGDYRDDITATIVRL 883
QNPDSPGE+ RIE+MGG+VS P G S+RVWLD T+IGLAMARSIGD A+ VGVIA P VTE L PQD+F+ILASDG+WEF+++Q+A +V LE+ + AC+ L+E A RW + G+YRDDITA +VRL
Sbjct: 386 QNPDSPGEQARIESMGGYVSAPPAPGLSSRVWLDSDLTQIGLAMARSIGDHAIGEVGVIADPVVTERVLEPQDDFMILASDGVWEFLSSQDAVNIVGEHLEE-RGSTKACQALIEAAAARWHDEEGEYRDDITAIVVRL 523
BLAST of mRNA_H-elongata_contig8492.16089.1 vs. uniprot
Match: A0A6S8RWV0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8RWV0_9STRA) HSP 1 Score: 161 bits (408), Expect = 5.820e-42 Identity = 78/139 (56.12%), Postives = 107/139 (76.98%), Query Frame = 2
Query: 467 QNPDSPGERDRIEAMGGFVSDPVEAGASARVWLDETKTKIGLAMARSIGDLAVERVGVIALPEVTEYELTPQDEFLILASDGIWEFITNQEATEVVHSLLEKGEDAADACKGLMELANRRWSEMVGDYRDDITATIVRL 883
QNPDSPGE++RI MGGFVS P E G SARVWLD ++IGLAMARS+GD AV+ +GV+A P VT++EL QDEF+I+A+DG+WEF+++QEA ++V L E ++ AC+ L+E A +W + GDYRDDITA ++++
Sbjct: 431 QNPDSPGEQERILQMGGFVSPPPEEGLSARVWLDAGFSQIGLAMARSLGDHAVKPIGVVAEPVVTKHELRDQDEFMIIATDGVWEFLSSQEAVDIVSKDLNSPEGSSLACQHLIEAAAAKWHQHEGDYRDDITAIVIKI 569
BLAST of mRNA_H-elongata_contig8492.16089.1 vs. uniprot
Match: A0A6U3Z835_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3Z835_9STRA) HSP 1 Score: 149 bits (376), Expect = 6.480e-41 Identity = 78/145 (53.79%), Postives = 108/145 (74.48%), Query Frame = 2
Query: 467 QNPDSPGERDRIEAMGGFVSDPVEAGASARVWLDETKTKIGLAMARSIGDLAVERVGVIALPEVTEYELTPQ-DEFLILASDGIWEFITNQEATEVVHSLL-----EKGEDAADACKGLMELANRRWSEMVGDYRDDITATIVRL 883
QNPDSPGE++RI GG+VS P E G +ARVWLD T+IGLAMARSIGD AV+ VGVIA P V+ + + + DEF+I+A+DG+WEFI++++A ++V L EK +DA++AC+ L++ A +W E G+YRDDITA ++RL
Sbjct: 33 QNPDSPGEKERILDSGGYVSPPPEPGLTARVWLDPNMTQIGLAMARSIGDHAVKGVGVIAEPVVSVHTIDEELDEFVIIATDGVWEFISSEDAVDIVGRCLYGTDGEK-QDASEACEALIKAATAKWHEFEGNYRDDITAMVIRL 176
BLAST of mRNA_H-elongata_contig8492.16089.1 vs. uniprot
Match: A0A7R9ZIN9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZIN9_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.010e-40 Identity = 75/125 (60.00%), Postives = 95/125 (76.00%), Query Frame = 2
Query: 509 MGGFVSDPVEAGASARVWLDETKTKIGLAMARSIGDLAVERVGVIALPEVTEYELTPQDEFLILASDGIWEFITNQEATEVVHSLLEKGEDAADACKGLMELANRRWSEMVGDYRDDITATIVRL 883
MGGFVS P E G SARVWLD T T+IGLAMARSIGD AV+ +GVIA P VT++++ P DEF+ILA+DG+WEFI+++EA +VV + G A AC+ L+E A RW + GDYRDDITA ++RL
Sbjct: 1 MGGFVSPPPEPGLSARVWLDSTCTQIGLAMARSIGDHAVKPIGVIAEPVVTQHKIHPDDEFMILATDGVWEFISSEEAVKVVSDNMHLG--ATKACQCLIEAAAARWHDEEGDYRDDITALVIRL 123 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8492.16089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8492.16089.1 >prot_H-elongata_contig8492.16089.1 ID=prot_H-elongata_contig8492.16089.1|Name=mRNA_H-elongata_contig8492.16089.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp MGGFVSDPVEAGASARVWLDETKTKIGLAMARSIGDLAVERVGVIALPEVback to top mRNA from alignment at H-elongata_contig8492:3856..5590+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8492.16089.1 ID=mRNA_H-elongata_contig8492.16089.1|Name=mRNA_H-elongata_contig8492.16089.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1735bp|location=Sequence derived from alignment at H-elongata_contig8492:3856..5590+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8492:3856..5590+ >mRNA_H-elongata_contig8492.16089.1 ID=mRNA_H-elongata_contig8492.16089.1|Name=mRNA_H-elongata_contig8492.16089.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=750bp|location=Sequence derived from alignment at H-elongata_contig8492:3856..5590+ (Himanthalia elongata Himel1 dioecious)back to top |