mRNA_H-elongata_contig8446.16058.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig8446.16058.1
Unique NamemRNA_H-elongata_contig8446.16058.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: D7FJR7_ECTSI (PPIase cyclophilin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJR7_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 2.200e-78
Identity = 124/198 (62.63%), Postives = 148/198 (74.75%), Query Frame = 3
Query:    3 VFHAWSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRVVSEMYQDEIGTAS-DSEKHTQVEEIGR--RPPP 587
            V+H+WSP G +RF+DLVKDDYFTDVALFRCV+ FL QFGISP   S K  +W+ +GPIKDDP L I F RG LSFAG+G NSR TQ+FITF ++  LG+  +PWETPLGIVT GM+TV+D  Y GYGDQ PFN+ GINQ TLQ+RGNAYLREEFP ISY K+CRVV E   +E  +A  + ++     E G   RPPP
Sbjct:   37 VYHSWSPNGAERFVDLVKDDYFTDVALFRCVKNFLVQFGISPYVSSPKKKFWREKGPIKDDPNLQISFKRGMLSFAGSGPNSRGTQVFITFADIPHLGK--TPWETPLGIVTQGMDTVVDKFYTGYGDQQPFNQDGINQGTLQSRGNAYLREEFPEISYLKECRVVGETVPEEHASARVEKQQEKPGGEYGDVLRPPP 232          
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A7S3MFS0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFS0_9STRA)

HSP 1 Score: 177 bits (450), Expect = 9.130e-52
Identity = 92/186 (49.46%), Postives = 119/186 (63.98%), Query Frame = 3
Query:    3 VFHAWSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRVVSEMYQDEIGTASDSEKHTQV 560
            ++  WSP+G +RFLDLVKDD+FTD+A FRCVR FL QFGIS  P      +W H+  I DDP L +   +  LSFAG G N+R+TQLFI F++L  LG+   PWETP G V  G +T +D+LY  YGD  PF K G +Q  + NRGNAY+RE+FP + + K C +V     +E    + SE H  V
Sbjct:   36 IYKEWSPLGAERFLDLVKDDFFTDIAFFRCVRRFLTQFGISDVPSKK---HW-HREEIPDDPNLNLGIKKNYLSFAGGGPNTRSTQLFIAFEDLDFLGK--EPWETPFGQVIEGQQT-LDSLYKDYGDIPPFGK-GPDQQKIHNRGNAYVREKFPKVDFIKSCHMVEPPKVEEKPIVAQSEVHEPV 213          
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A7S1R7D7_ALECA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R7D7_ALECA)

HSP 1 Score: 162 bits (411), Expect = 3.500e-46
Identity = 83/172 (48.26%), Postives = 110/172 (63.95%), Query Frame = 3
Query:    3 VFHAWSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRVVSEMYQD 518
            V+  WSP G + FLDLVK  ++TD+ALFR V  FL QFGIS D   S  T       I+DDP+LG+PF RGTLS+AG G NSRT Q+FI+F + + LG+  SPWETP G V+     ++  +Y GYGD  P+ K G + + +Q  GN Y+R+EFP I + + C+VV     D
Sbjct:   30 VYREWSPNGAEHFLDLVKAGWYTDIALFRAVPNFLVQFGISTD---SAMTQKYGSQTIEDDPSLGLPFERGTLSYAGGGPNSRTNQVFISFGQNRGLGK--SPWETPFGHVSKHSMDILSQIYTGYGDMPPWGK-GPSPSLIQQHGNKYVRDEFPKIDFIRSCKVVDASSHD 195          
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A7S1T0Y9_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T0Y9_9CHLO)

HSP 1 Score: 159 bits (403), Expect = 1.110e-43
Identity = 81/182 (44.51%), Postives = 114/182 (62.64%), Query Frame = 3
Query:   15 WSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRVVSEMYQ-----DEIGTASDSE 545
            W+P+G  RFL+LV+  +F DVALFR V  FL QFGI+ DPE +K   W+ +G I DDP++G P  RGT++FAG+G+NSRTTQ++I F++   LG+    WETP   VT GM+ V+D  Y GYGD   F     +   +   GN+Y+++EFP + Y   CRV+ +        D+ GT   +E
Sbjct:   48 WAPLGAARFLELVESGFFVDVALFRVVPNFLVQFGIAADPEVTKK--WQSKGNIMDDPSIGTPVKRGTIAFAGSGQNSRTTQMWIAFQDSAHLGKAF--WETPFAQVTEGMD-VVDRFYSGYGDMEAFGGHCPDSGKMSTLGNSYVKKEFPQMDYITSCRVLGQEAMVVAAADQAGTVQQAE 224          
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A6B2LG42_9EUKA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LG42_9EUKA)

HSP 1 Score: 148 bits (374), Expect = 3.960e-40
Identity = 79/168 (47.02%), Postives = 103/168 (61.31%), Query Frame = 3
Query:    3 VFHAWSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRVVSE 506
            V+  W+P+G  RFL+LV+D+YFT    FR V+GFL QFGI  DP   K   W  +GPI DDP  G+ F RG LSFAG GE+SRTT+LF+ + +    G  ++ WE P G+V   M+ V D +   YGD  P+ + G +Q  L  RGNAYL E FP + Y   C + SE
Sbjct:   15 VYPDWAPIGSDRFLELVRDNYFTKSPFFRVVKGFLVQFGIPADPSKWKE--WHDKGPINDDPPKGVSFKRGYLSFAGYGEDSRTTELFVAYSDENGFG--NTRWEVPFGVVQ-DMD-VFDQINDEYGDVPPYGQ-GPDQQQLYLRGNAYLTENFPKMDYISYCSIESE 175          
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A7S0CX23_9EUKA (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CX23_9EUKA)

HSP 1 Score: 143 bits (361), Expect = 2.320e-38
Identity = 77/164 (46.95%), Postives = 102/164 (62.20%), Query Frame = 3
Query:   12 AWSPVGVQRFLDLVKDDYFTD-VALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTA-GMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRV 497
            AWSP G  RF DLV++ YF D V +FR V+GFL QFGIS +   S+N  W+ + PI DD  +   F RG +SFAG+G NSRTTQ FI +++   LG  ++PWETP G ++   ME V+DN Y  YGD   F  K  +Q    + G  Y+++EFP + Y   CRV
Sbjct:   51 AWSPRGADRFKDLVEEGYFDDGVGMFRVVKGFLVQFGISNNV--SRNAAWEVKSPIPDDTRVLSTFKRGYVSFAGSGPNSRTTQTFICYQDNNHLG--NAPWETPFGWISGYDMEKVVDNFYSEYGDIPHFGGKCPDQGRYSHEGGEYVKKEFPNLDYITSCRV 210          
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A2R5GIZ6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIZ6_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.560e-37
Identity = 73/162 (45.06%), Postives = 97/162 (59.88%), Query Frame = 3
Query:   12 AWSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTA-GMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCR 494
            +W+PVG +RFL+LV + +F    LFR VRGFL QFG+S DPE+  N  W H   + DDP  G+   RGTL+FAG+G+NSR TQ+FI   +       S PWETP   V A   + V+  L   YGD  PFNK+G++   +   G +YL + FP + Y   CR
Sbjct:   33 SWAPVGAERFLNLVDEGFFDGAPLFRAVRGFLVQFGLSSDPEA--NNRWGHLT-LPDDPKQGVRIRRGTLAFAGSGKNSRATQMFIALTDKAWPRLGSEPWETPFAYVPAEDYQAVVSLLNTEYGDIKPFNKQGVDPGKIWRHGMSYLEDGFPNLDYLAYCR 191          
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A835YQT8_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT8_9STRA)

HSP 1 Score: 140 bits (354), Expect = 5.300e-37
Identity = 69/166 (41.57%), Postives = 93/166 (56.02%), Query Frame = 3
Query:    9 HAWSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGP-IKDD-PTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRVV 500
            H W+P+G  RF+ ++     TD+ALFR  + F+ Q G+           W    P   DD P   +PF  G +SFAG G++SR T  FI + + + LG   SPWETP G+V  GM  V+   Y GYG+  PFN  G+NQ+ +   GNAYLR EFP + Y K C +V
Sbjct:   48 HEWAPLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLG--GSPWETPFGVVVGGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAIV 211          
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A7S0J996_9EUKA (Peptidyl-prolyl cis-trans isomerase (Fragment) n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J996_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 9.690e-34
Identity = 71/167 (42.51%), Postives = 104/167 (62.28%), Query Frame = 3
Query:    3 VFHAWSPVGVQRFLDLVKDDYFTDVALFRCVRGFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYGDQLPFNKKGINQNTLQNRGNA--YLREEFPLISYFKKCRV 497
            ++  W+P+GV+R + L +D +F+++  FR +  FL QFGI  D  ++K  +W+HQG IKDDP+ GIPF  G +SFAG  ++SR+T LFIT  E + LG  S PWE  +G V  G++ V+  +Y GYGDQ       + Q  LQ R +A  Y+ + FP +  F+ C V
Sbjct:   40 LYPEWAPLGVERAIALAEDGFFSNLPFFRAIPHFLIQFGIQLD--AAKQRHWQHQGNIKDDPSQGIPFTEGVVSFAGYSKDSRSTHLFITLGEQRGLG--SRPWEVAIGKVVRGID-VVHGIYTGYGDQ-------VQQGRLQ-RSDAVQYVADNFPKLDKFEACEV 193          
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Match: A0A7S4JKR9_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4JKR9_9EUKA)

HSP 1 Score: 132 bits (333), Expect = 2.480e-33
Identity = 76/182 (41.76%), Postives = 109/182 (59.89%), Query Frame = 3
Query:    3 VFHAWSPVGVQRFLDLVKDDYFTDVALFRCVR-----GFLCQFGISPDPESSKNTYWKHQGPIKDDPTLGIPFHRGTLSFAGNGENSRTTQLFITFKELQTLGQPSSPWETPLGIVTAGMETVMDNLYMGYG----DQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCRVVSEMYQDE 521
            V+  WSP+G +RF++LVKD Y+    +FR  +     G+L QFGIS + +  +   W     I DDP+LG  F RG +SFAGNG NSRTTQ+FI + +  + G  ++PWETP G V  GM  + D  Y G G    D  PF + G + + ++ +G  YLR+ FP ++Y ++C VVSE +  E
Sbjct:   75 VYSNWSPLGAKRFVELVKDGYYDQSPIFRVAKRGRNWGYLTQFGISLNKDLEEK--WG-SSTIPDDPSLGFSFDRGDISFAGNGPNSRTTQVFIPYGDTTSRGLGNAPWETPFGKVVVGMN-IADEFYDGDGKISLDIPPFGQ-GPDPHKIKTQGRPYLRKNFPELTYIEEC-VVSEDFTHE 250          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8446.16058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJR7_ECTSI2.200e-7862.63PPIase cyclophilin-type domain-containing protein ... [more]
A0A7S3MFS0_9STRA9.130e-5249.46Peptidyl-prolyl cis-trans isomerase n=1 Tax=Spumel... [more]
A0A7S1R7D7_ALECA3.500e-4648.26Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alexan... [more]
A0A7S1T0Y9_9CHLO1.110e-4344.51Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A6B2LG42_9EUKA3.960e-4047.02PPIase cyclophilin-type domain-containing protein ... [more]
A0A7S0CX23_9EUKA2.320e-3846.95Peptidyl-prolyl cis-trans isomerase n=3 Tax=Amorph... [more]
A0A2R5GIZ6_9STRA2.560e-3745.06Peptidyl-prolyl cis-trans isomerase n=1 Tax=Hondae... [more]
A0A835YQT8_9STRA5.300e-3741.57PPIase cyclophilin-type domain-containing protein ... [more]
A0A7S0J996_9EUKA9.690e-3442.51Peptidyl-prolyl cis-trans isomerase (Fragment) n=2... [more]
A0A7S4JKR9_9EUKA2.480e-3341.76Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8446contigH-elongata_contig8446:4868..7025 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score91.7
Seed ortholog evalue3.2e-16
Seed eggNOG ortholog2880.D7FJR7
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0883@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size840
Cds size441
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8446.16058.1prot_H-elongata_contig8446.16058.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig8446 4923..5665 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931249.770221-UTR-H-elongata_contig8446:4867..49221622931249.770221-UTR-H-elongata_contig8446:4867..4922Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8446 4868..4922 -
1691679759.4502373-UTR-H-elongata_contig8446:4867..49221691679759.4502373-UTR-H-elongata_contig8446:4867..4922Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8446 4868..4922 -
1622931249.8234825-UTR-H-elongata_contig8446:5665..57491622931249.8234825-UTR-H-elongata_contig8446:5665..5749Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8446 5666..5749 -
1691679759.4799454-UTR-H-elongata_contig8446:5665..57491691679759.4799454-UTR-H-elongata_contig8446:5665..5749Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8446 5666..5749 -
1622931249.8416588-UTR-H-elongata_contig8446:6156..62051622931249.8416588-UTR-H-elongata_contig8446:6156..6205Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8446 6157..6205 -
1691679759.4889724-UTR-H-elongata_contig8446:6156..62051691679759.4889724-UTR-H-elongata_contig8446:6156..6205Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8446 6157..6205 -
1622931249.859984-UTR-H-elongata_contig8446:6814..70251622931249.859984-UTR-H-elongata_contig8446:6814..7025Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8446 6815..7025 -
1691679759.5012465-UTR-H-elongata_contig8446:6814..70251691679759.5012465-UTR-H-elongata_contig8446:6814..7025Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8446 6815..7025 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931249.7867486-CDS-H-elongata_contig8446:4922..52531622931249.7867486-CDS-H-elongata_contig8446:4922..5253Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8446 4923..5253 -
1691679759.4611828-CDS-H-elongata_contig8446:4922..52531691679759.4611828-CDS-H-elongata_contig8446:4922..5253Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8446 4923..5253 -
1622931249.8064625-CDS-H-elongata_contig8446:5555..56651622931249.8064625-CDS-H-elongata_contig8446:5555..5665Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8446 5556..5665 -
1691679759.4707077-CDS-H-elongata_contig8446:5555..56651691679759.4707077-CDS-H-elongata_contig8446:5555..5665Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8446 5556..5665 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig8446.16058.1

>prot_H-elongata_contig8446.16058.1 ID=prot_H-elongata_contig8446.16058.1|Name=mRNA_H-elongata_contig8446.16058.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp
METVMDNLYMGYGDQLPFNKKGINQNTLQNRGNAYLREEFPLISYFKKCR
VVSEMYQDEIGTASDSEKHTQVEEIGRRPPPHEVPLLESPGYQPALLDPD
GVIQRGGSIGPYVFAVIGFALVLWTFIRNKSSWTWKTRNKRRALKK*
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mRNA from alignment at H-elongata_contig8446:4868..7025-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig8446.16058.1 ID=mRNA_H-elongata_contig8446.16058.1|Name=mRNA_H-elongata_contig8446.16058.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2158bp|location=Sequence derived from alignment at H-elongata_contig8446:4868..7025- (Himanthalia elongata Himel1 dioecious)
AGGTGTTCCACGCATGGTCTCCCGTCGGCGTTCAACGTTTTTTGGACCTG GTGAAGGATGATTATTTCACCGATGTTGCTCTCTTCCGCTGCGTCCGAGG CTTCCTCTGCCAATTCGGTATCTCGCCAGACCCGGAGTCCTCCAAAAATA CGTATTGGAAGCATCAAGGCCCGATAAAGGATGATCCCACCTTGGGGATT CCTTTCCACAGGTTTGGATACGTGTACTGGAGGAGTGAACGTACAGGATG GTGCACCGCCATGCTCCAACCATGGGGTTGATAATTTGCCGCTCTTAAAC ATGGCGGGGATGGATAAGGGGGGTTTCTCTATGTCGCTCTTTTACCCGCT TCATTACTAAGCTGTAGTAGGCCACCTCCCTTTCCTTGCTGTAGGCGACA TCTCCCGAGGCTTTGTGTCCCTGTTTGATGTATTTCACAACTAGGCACAT AATGCGAGCAGCAACAGCAAACGCTGCGTATTTGTAACGAGGTCGCTTGC AATGTCGGTGATGCATGTGATTTTTTTTTGAAATTGGGTCGTAATAGTTC TTTCATCACCTGTAAATAACGGGAACCCTGTCGGCATCCCCTATCAAAAC GAATGGCGCTTCATATTTACAAATAAATCGGTGTTAAAAAAATATATCGT AGGGGTACGAGTTCTAGAACGGAAAATTGCCGAGGTACTAAGCATCCCGC GCGCTTGCTGCGTTGTTCACTGGCCGGCGCAGGCATCACGAGTCCACTCA CGCGATGCTAATGCCGCCATCTACCAACGCTGTTGCTTTCGTCTCTCGCA ACCGAACTGTTTGGTACAAGGGGGACGCTGAGCTTCGCGGGAAATGGGGA GAATTCTCGGACGACTCAGGTGATCGTTTCGCCTCGCTATGACAGAGAAG CGTCCCAAGTCAGGCTTTTATGCGCTCAGGGTTATTTAGGGTTGCACACA CATGCTTTTGAGTGTCGAGGGCGCATAAACACGCTAGCCTTTCCGAATCG CTCGACGTCCTACTAACTCGAGTGGAGAGCAATAACGTGAACTTCCCGGG GTAAAAAGTCACGCCTCCCTTCTATAATTCGTCCAGCTGAGGGTTTCCTC CGTCGTATACTGCCAAAAAATGCCCTCTCAAATCTCCGCATGATTGCCTT GTCCGCTTCGAACAAAAATGACATACCGACTTAATCAGTTCAACGTTATC ATCTTCCGAGTCGCGAAAGCACCCTAACCCAGTAAGAGTAGACCTGTTTA CGGTATGCCCCTCGTTTCCGCTGCAGCTCTTCATCACATTTAAGGAGCTC CAGACCCTGGGGCAACCATCATCTCCATGGGAAACCCCACTCGGAATCGT TACGGCGGGGATGGAAACGGTGATGGACAATCTTTACATGGGCTACGGTG ACCAGCTACCTTTCAATAAAAAAGGGATCAACCAAAACACGCTTCAAAAC CGTGGCAACGCGTATTTGAGGTATGGATCGCCATCGAGGGGGGGGGCGAT CGATGAGCTCGTTTTCCTCGCGTTAATGCGGAGTCGCATGAGCTTGCATC ACGCACTGTCTAGTATTTAAACCTAAGAAGCTATAGTAAAGTAATATTTA TACCAGAAGGCGTCGATTTTGTTTTATTATTTATTCGAGCTGTAGGAGCT CTTGTATAGCCCGAGCGCAACTCGCAAAAACCACGGAGTCGTGTTGCGTC CGCGGTCGTCGGATTCAACGTTCTTCGTCTCGTATGGCACTGCCGTGACG ATCCACGCTGACTCTTTGACAGAGAGGAGTTCCCGCTGATCTCCTACTTC AAGAAATGCAGAGTGGTCAGTGAAATGTACCAAGACGAGATTGGAACTGC CAGTGACAGTGAAAAACACACCCAGGTTGAAGAGATCGGGCGTCGGCCGC CGCCTCACGAAGTGCCTCTGTTGGAGAGCCCGGGGTATCAGCCAGCGCTT CTGGACCCGGACGGTGTCATACAAAGAGGTGGCTCCATTGGCCCGTACGT TTTCGCCGTGATTGGGTTCGCCCTCGTCCTGTGGACGTTTATTAGGAACA AAAGCTCATGGACGTGGAAAACTAGGAACAAGAGACGGGCACTTAAAAAG TAGCGTCGCCGGGAGCGCGTCGTTTTTCCTTCGTTAGTGAATCGCCGACC CCTTTGAC
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Coding sequence (CDS) from alignment at H-elongata_contig8446:4868..7025-

>mRNA_H-elongata_contig8446.16058.1 ID=mRNA_H-elongata_contig8446.16058.1|Name=mRNA_H-elongata_contig8446.16058.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=882bp|location=Sequence derived from alignment at H-elongata_contig8446:4868..7025- (Himanthalia elongata Himel1 dioecious)
ATGGAAACGGTGATGGACAATCTTTACATGGGCTACGGTGACCAGCTACC
TTTCAATAAAAAAGGGATCAACCAAAACACGCTTCAAAACCGTGGCAACG
CGTATTTGAGATGGAAACGGTGATGGACAATCTTTACATGGGCTACGGTG
ACCAGCTACCTTTCAATAAAAAAGGGATCAACCAAAACACGCTTCAAAAC
CGTGGCAACGCGTATTTGAGAGAGGAGTTCCCGCTGATCTCCTACTTCAA
GAAATGCAGAGTGGTCAGTGAAATGTACCAAGACGAGATTGGAACTGCCA
GTGACAGTGAAAAACACACCCAGGTTGAAGAGATCGGGCGTCGGCCGCCG
CCTCACGAAGTGCCTCTGTTGGAGAGCCCGGGGTATCAGCCAGCGCTTCT
GGACCCGGACGGTGTCATACAAAGAGGTGGCTCCATTGGCCCGTACGTTT
TCGCCGTGATTGGGTTCGCCCTCGTCCTGTGGACGTTTATTAGGAACAAA
AGCTCATGGACGTGGAAAACTAGGAACAAGAGACGGGCACTTAAAAAGTA
GAGAGGAGTTCCCGCTGATCTCCTACTTCAAGAAATGCAGAGTGGTCAGT
GAAATGTACCAAGACGAGATTGGAACTGCCAGTGACAGTGAAAAACACAC
CCAGGTTGAAGAGATCGGGCGTCGGCCGCCGCCTCACGAAGTGCCTCTGT
TGGAGAGCCCGGGGTATCAGCCAGCGCTTCTGGACCCGGACGGTGTCATA
CAAAGAGGTGGCTCCATTGGCCCGTACGTTTTCGCCGTGATTGGGTTCGC
CCTCGTCCTGTGGACGTTTATTAGGAACAAAAGCTCATGGACGTGGAAAA
CTAGGAACAAGAGACGGGCACTTAAAAAGTAG
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