mRNA_H-elongata_contig83894.16001.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig83894.16001.1 vs. uniprot
Match: D7FJJ6_ECTSI (Solute carrier family 35 member 3A, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJJ6_ECTSI) HSP 1 Score: 328 bits (841), Expect = 4.990e-105 Identity = 176/273 (64.47%), Postives = 210/273 (76.92%), Query Frame = 2
Query: 791 ESGGSRAFFKKLKLEVARKPREVAKLTVPALLYTLQNNLLFIALQHLDPATYSVCYQTKILTTALFSVLLLGKRLSFVKWSSLVLLMVGVALAELPKETTKQEIVEPEEVFKQFPMLGFWCVMAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLPSVVLAIAGVFLKDWKHVTSNGFFHGYSGVVLGVVVLQAGGGLVVAVVVKYTDNIRKSFAAAVSIIISCIMSMFLFDFQPTLTFIIGAGCVCTSVFMYSRPPPSRGLPTFHKAPHAT 1609
ESG R F KKL++EVA KPRE+AKL +PA+LYTLQNN+L++AL++LD ATYSVCYQTKILTTALFSV+LL ++LS KW +LVLL VGVALA+L ++T + E Q P++GF CVM AACTSGFAGVYFEMLLKGSKTSLW+RNIQMG+PS+VLA V +KDW+ VTSNGFF GY VV V+VLQA GGLVVAVVVKY DNIRKSFA A+SIIISC +S F F+PT F IG+ V SVF+Y++ LP F+K T
Sbjct: 62 ESGELRTFSKKLRVEVAGKPREMAKLMIPAMLYTLQNNMLYMALENLDAATYSVCYQTKILTTALFSVILLRRKLSATKWGALVLLAVGVALAQLSSQSTNSPKAD-ESSRGQSPVVGFLCVMGAACTSGFAGVYFEMLLKGSKTSLWIRNIQMGIPSIVLAFGSVIVKDWRAVTSNGFFFGYGWVVAAVIVLQAVGGLVVAVVVKYADNIRKSFATAISIIISCALSTLFFAFKPTFLFFIGSAMVVGSVFLYTKQDRPARLPLFNKGRSVT 333
BLAST of mRNA_H-elongata_contig83894.16001.1 vs. uniprot
Match: A0A836C750_9STRA (Nucleotide-sugar transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C750_9STRA) HSP 1 Score: 278 bits (710), Expect = 9.480e-85 Identity = 154/298 (51.68%), Postives = 199/298 (66.78%), Query Frame = 2
Query: 794 SGGSRAFFKKLKLEVARKPREVAKLTVPALLYTLQNNLLFIALQHLDPATYSVCYQTKILTTALFSVLLLGKRLSFVKWSSLVLLMVGVALAEL-----PKETTKQEIVEP-------------------------------------EEVFKQFPMLGFWCVMAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLPSVVLAIAGVFLKDWKHVTSNGFFHGYSGVVLGVVVLQAGGGLVVAVVVKYTDNIRKSFAAAVSIIISCIMSMFLFDFQPTLTFIIGAGCVCTSVFMYSRP 1561
SGG + F + +K+E+ KP E+ KL +P+ LY +QNNLL+ AL +LDPATYSVCYQ KI+TTALFSV+LL KRLS +KW +LVLL +GVALAEL PK EP EE+ Q +LGF CV+AA CTSGFAGV+FEM+LKG+KTSLW+RN+QMGLPS++ A+A + KD + GFF+GY+G+V GV+VLQA GGL+VAVVVKY DNI K+FA+AVSI+ SC++S LF F+P+ F++G V SVF+YS+P
Sbjct: 61 SGGYKPFLRTMKIEIVNKPAELGKLALPSFLYMVQNNLLYEALSNLDPATYSVCYQLKIMTTALFSVILLKKRLSPLKWMALVLLTLGVALAELATHAAPKAADADAPPEPMLPLPTAAPDLDSGSAIGNPLQRRLQEDGEAAALGGFEELKMQRQLLGFLCVLAATCTSGFAGVWFEMILKGAKTSLWIRNVQMGLPSILFALASCYTKDLALLRDRGFFYGYTGIVWGVIVLQAVGGLMVAVVVKYADNILKAFASAVSIVTSCLLSALLFGFRPSPVFMVGTLLVSVSVFLYSKP 358
BLAST of mRNA_H-elongata_contig83894.16001.1 vs. uniprot
Match: A0A7S2U9J9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9J9_9STRA) HSP 1 Score: 258 bits (658), Expect = 4.470e-77 Identity = 144/262 (54.96%), Postives = 180/262 (68.70%), Query Frame = 2
Query: 791 ESGGS-RAFFKKLKLEVARKPREVAKLTVPALLYTLQNNLLFIALQHLDPATYSVCYQTKILTTALFSVLLLGKRLSFVKWSSLVLLMVGVALAELPKETTKQEIVEPEEVFKQFPMLGFWCVMAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLPSVVLAIAGVFLKDWKHVTSNGFFHGYSGVVLGVVVLQAGGGLVVAVVVKYTDNIRKSFAAAVSIIISCIMSMFLFDFQPTLTFIIGAGCVCTSVFMYSRPPPSR 1573
+SG S A + +L V P EV KL VP+LLYT+QNNLL++AL +LD ATY VCYQ KILTTALFS LL + S +KW SLV+L +GVA+ +L K V E+ + M+G V+ AACTSGFAGVYFE +LKGS T+LW+RNIQMGLPSV++A GV++KD + GFF GY+ +V VV +QA GGL+VAVVVKY DN+ K FA + SIIISCI+S +FDF+P F+ GA V S MYSRP R
Sbjct: 100 QSGSSPSALYDELYEHVWNSPFEVLKLCVPSLLYTVQNNLLYLALTNLDAATYQVCYQLKILTTALFSATLLQRSFSRLKWMSLVILTIGVAIVQLSGSGDKHHHVASEDEASRNRMVGLVAVLCAACTSGFAGVYFERILKGSSTTLWLRNIQMGLPSVIIAYIGVYMKDSMIIAEKGFFVGYTPLVWTVVTVQAVGGLIVAVVVKYADNVLKVFATSFSIIISCIISAVVFDFRPNFLFVCGASLVMASTVMYSRPDTRR 361
BLAST of mRNA_H-elongata_contig83894.16001.1 vs. uniprot
Match: A0A7S2VC43_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VC43_9STRA) HSP 1 Score: 249 bits (637), Expect = 1.360e-74 Identity = 139/274 (50.73%), Postives = 180/274 (65.69%), Query Frame = 2
Query: 809 AFFKKLKLEVARKPREVAKLTVPALLYTLQNNLLFIALQHLDPATYSVCYQTKILTTALFSVLLLGKRLSFVKWSSLVLLMVGVALAELP----KETTKQEIVEPEEVFKQFP--------------MLGFWCVMAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLPSVVLAIAGVFLKDWKHVTSNGFFHGYSGVVLGVVVLQAGGGLVVAVVVKYTDNIRKSFAAAVSIIISCIMSMFLFDFQPTLTFIIGAGCVCTSVFMYSRPPPSRG 1576
A F++L L V + P E+AKLT+P+LLYT+QNNLL++AL +LD ATY VCYQ KILTTALFS LLL ++ S KW SL++L VGVA+ ++ + TT ++G V+ AACTSGF+GVYFE +LKGS+TSLW+RNIQMGLPS+++A V++KD V + GF GYS +V VV +QA GGL+VA VVKY DN+ K FA + SI++SCI+S FLFDF PT F+ GA V T+ MYS P G
Sbjct: 34 ALFRELYLHVVQSPMEIAKLTIPSLLYTIQNNLLYLALTNLDAATYQVCYQLKILTTALFSALLLQRKFSGQKWMSLIVLTVGVAIVQISGSGDQHTTNAHXXXXXXXXXXXXXXXXXXXXXXXXNRVIGLIAVLCAACTSGFSGVYFEKILKGSRTSLWIRNIQMGLPSILIAYITVYVKDAPAVQTQGFLGGYSSLVWTVVTVQAVGGLIVATVVKYADNVLKVFATSFSIVVSCIISAFLFDFHPTWMFLCGASLVVTATVMYSSPESDGG 307
BLAST of mRNA_H-elongata_contig83894.16001.1 vs. uniprot
Match: A0A0L0FIU7_9EUKA (UDP-N-acetylglucosamine transporter (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FIU7_9EUKA) HSP 1 Score: 243 bits (619), Expect = 4.770e-72 Identity = 130/256 (50.78%), Postives = 178/256 (69.53%), Query Frame = 2
Query: 824 LKLEVARKPREVAKLTVPALLYTLQNNLLFIALQHLDPATYSVCYQTKILTTALFSVLLLGKRLSFVKWSSLVLLMVGVALAELPKETTKQEIVEPEEVFKQFPMLGFWCVMAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLPSVVLAIAGVFLKDWKHVTSNGFFHGYSGVVLGVVVLQAGGGLVVAVVVKYTDNIRKSFAAAVSIIISCIMSMFLFDFQPTLTFIIGAGCVCTSVFMYSRPPPSRG--LPT 1585
LK ++ + KL+VPA++YTLQ NLL++A+ +LD ATY V YQ KILTTA+FSV +LGK L+ KW SL +LM GVAL ++P TK+E++ + MLG + V+AA C+SGFAGVYFE +LKG+ S+W+RN+Q+G ++ + V + D+ V NGFF+GY+ +V V+ LQA GGL++AVVVKY DNI K FA +VSII++ I+S+ FDFQPT F++GA V +V MYSRP P LPT
Sbjct: 73 LKEQIFDNLADTMKLSVPAIMYTLQGNLLYVAISNLDAATYQVTYQLKILTTAIFSVWMLGKHLTNFKWLSLFILMSGVALVQIPTGDTKKEVIVGNQ------MLGLFAVLAACCSSGFAGVYFEKILKGTSASIWIRNVQLGSFGFIIGMVVVAINDYSAVVQNGFFYGYTPLVWLVITLQAAGGLIIAVVVKYADNILKGFATSVSIILASIISVIFFDFQPTTLFLLGASMVIGAVGMYSRPDPPAAPVLPT 322
BLAST of mRNA_H-elongata_contig83894.16001.1 vs. uniprot
Match: A0A7S3L616_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L616_9STRA) HSP 1 Score: 243 bits (620), Expect = 4.650e-71 Identity = 134/257 (52.14%), Postives = 175/257 (68.09%), Query Frame = 2
Query: 809 AFFKKLKLEVARKPREVAKLTVPALLYTLQNNLLFIALQHLDPATYSVCYQTKILTTALFSVLLLGKRLSFVKWSSLVLLMVGVALAELP------KETTKQEIVEPEEVFKQFPMLGFWCVMAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLPSVVLAIAGVFLKDWKHVTSNGFFHGYSGVVLGVVVLQAGGGLVVAVVVKYTDNIRKSFAAAVSIIISCIMSMFLFDFQPTLTFIIGAGCVCTSVFMYSRP 1561
A ++L V + P E+ KLTVP+LLYT+QNNLL++AL +LD ATY VCYQ KILTTALFS ++L ++ S KW +LV+L VGVA+ ++ + + Q ++G V+ AACTSGF+GVYFE +LKGS+TSLW+RNIQMGLPSVV+A V +KD V GFF GY+ +V VV +QA GGL+VA VVKY DN+ K FA + SI++SCI+S FLFDF P+ F+ GA V T+ MYS P
Sbjct: 139 ALHQELHQHVIQSPMEILKLTVPSLLYTVQNNLLYLALTNLDAATYQVCYQLKILTTALFSAVMLQRKFSGQKWFALVVLTVGVAVVQVSGSGDQHSDXXXXXXXPSNQEAPQNRVVGLVAVLCAACTSGFSGVYFEKILKGSRTSLWIRNIQMGLPSVVIAYIAVCVKDAAAVRQQGFFGGYNNIVWTVVAVQAIGGLIVATVVKYADNVLKVFATSFSIVLSCIISAFLFDFHPSWMFLCGASLVVTATVMYSSP 395
BLAST of mRNA_H-elongata_contig83894.16001.1 vs. uniprot
Match: B7FYG7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYG7_PHATC) HSP 1 Score: 240 bits (612), Expect = 7.420e-71 Identity = 129/249 (51.81%), Postives = 177/249 (71.08%), Query Frame = 2
Query: 848 PREVAKLTVPALLYTLQNNLLFIALQHLDPATYSVCYQTKILTTALFSVLLLGKRLSFVKWSSLVLLMVGVALAELP---KETTKQEIVEPEEVFKQFP--------MLGFWCVMAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLPSVVLAIAGVFLKDWKHVTSNGFFHGYSGVVLGVVVLQAGGGLVVAVVVKYTDNIRKSFAAAVSIIISCIMSMFLFDFQPTLTFIIGAGCVCTSVFMYSRP 1561
P E+ KLTVP+LLYT+QNNLL++AL +LD ATY VCYQ KILTTALFS LLL ++ S +KW SLV+L +GVA+ +L + ++Q+ + +G V+ AACTSGF+GVYFE +LKGS+TSLW+RN+QMGL S+V+A V++KD + + + GF+ GY+ +V VV +QA GGL+VA VVKY DN+ K FA + SI++SCI+S FLFDF P+++F++GA V T+ MYS P
Sbjct: 63 PLELLKLTVPSLLYTVQNNLLYLALTNLDAATYQVCYQLKILTTALFSALLLQRKFSTMKWLSLVVLTIGVAIVQLSGSGDQHSEQDSKAATDAVDDTNGTAAAHTRWVGLVAVLCAACTSGFSGVYFEKILKGSRTSLWIRNVQMGLSSIVIAYLTVYVKDAEAIRTQGFWGGYNTLVWTVVTVQAVGGLIVATVVKYADNVLKVFATSFSIVVSCIVSAFLFDFHPSVSFLVGASLVVTATVMYSSP 311
BLAST of mRNA_H-elongata_contig83894.16001.1 vs. uniprot
Match: A0A6J8AU58_MYTCO (SLC35A1_2_3 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8AU58_MYTCO) HSP 1 Score: 241 bits (615), Expect = 7.500e-71 Identity = 127/258 (49.22%), Postives = 180/258 (69.77%), Query Frame = 2
Query: 791 ESGGSRAFFKKLKLEVARKPREVAKLTVPALLYTLQNNLLFIALQHLDPATYSVCYQTKILTTALFSVLLLGKRLSFVKWSSLVLLMVGVALAELPKETTKQEIVEPEEVFKQFPMLGFWCVMAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLPSVVLAIAGVFLKDWKHVTSNGFFHGYSGVVLGVVVLQAGGGLVVAVVVKYTDNIRKSFAAAVSIIISCIMSMFLFDFQPTLTFIIGAGCVCTSVFMYSRPP 1564
+ G + F + L + ++P + K+++P+++Y LQNNLL++A+ +LD ATY V YQ KILTTA+FSV +L K++S ++W+SLV+L +GV++ +L +KQ+ E Q PMLGF CV+ + C SGFAGVYFE +LKG+K S+W+RN+Q+G VV+ + + + D VT GFFHGY +V V+ LQ+ GGL VAVVVKY DNI K FA + +II+SCI S++ FDFQ TL F +GA V SV+MYSR P
Sbjct: 106 QEGSVKKFVQHLVDNIIKQPMDCVKVSIPSIIYVLQNNLLYVAVSNLDAATYQVSYQLKILTTAVFSVFMLKKQISKLQWTSLVILFIGVSVVQLQPTESKQKAPPAVE---QNPMLGFICVVISCCMSGFAGVYFEKILKGTKGSVWLRNVQLGGLGVVIGLITMEINDGTKVTEKGFFHGYHSIVWFVIFLQSFGGLCVAVVVKYADNILKGFATSAAIILSCIASIYFFDFQLTLQFSLGASLVMYSVYMYSRYP 360
BLAST of mRNA_H-elongata_contig83894.16001.1 vs. uniprot
Match: A0A7S4SDY4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SDY4_9STRA) HSP 1 Score: 242 bits (617), Expect = 9.740e-71 Identity = 131/238 (55.04%), Postives = 166/238 (69.75%), Query Frame = 2
Query: 848 PREVAKLTVPALLYTLQNNLLFIALQHLDPATYSVCYQTKILTTALFSVLLLGKRLSFVKWSSLVLLMVGVALAELPKETTKQEIVEPEEVFKQFPMLGFWCVMAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLPSVVLAIAGVFLKDWKHVTSNGFFHGYSGVVLGVVVLQAGGGLVVAVVVKYTDNIRKSFAAAVSIIISCIMSMFLFDFQPTLTFIIGAGCVCTSVFMYSRP 1561
P EV KL VP+LLY +QNNLL+IAL +LD ATY VCYQ KILTTA+FS +LL + S KW SL++L GVA+ + + K + Q +G V+ AACTSGF+GVYFE +LKGSKTSLW+RNIQMG S+ +++ VFL+D V++ GFF GYS +V VV +QA GGL+VAVVVKY DN+ K+FAA+ SII SCI+S LFDFQP F+ GA V +S +YS P
Sbjct: 143 PFEVLKLCVPSLLYAVQNNLLYIALTNLDAATYQVCYQLKILTTAIFSAILLKRTFSCTKWFSLIILTAGVAIVQTSGSSDKSSSSDANVSINQNRFVGTVAVLCAACTSGFSGVYFEKILKGSKTSLWIRNIQMGFSSIFISLIMVFLQDLAAVSTKGFFVGYSPLVWLVVTIQAAGGLIVAVVVKYADNVLKTFAASFSIIASCIVSSVLFDFQPNKMFLAGAALVVSSTVLYSWP 380
BLAST of mRNA_H-elongata_contig83894.16001.1 vs. uniprot
Match: UPI0015ADE86E (UDP-N-acetylglucosamine transporter-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015ADE86E) HSP 1 Score: 238 bits (607), Expect = 5.300e-70 Identity = 124/268 (46.27%), Postives = 185/268 (69.03%), Query Frame = 2
Query: 791 ESGGSRAFFKKLKLEVARKPREVAKLTVPALLYTLQNNLLFIALQHLDPATYSVCYQTKILTTALFSVLLLGKRLSFVKWSSLVLLMVGVALAELPKETTKQEIVEPEEVFKQFPMLGFWCVMAAACTSGFAGVYFEMLLKGSKTSLWVRNIQMGLPSVVLAIAGVFLKDWKHVTSNGFFHGYSGVVLGVVVLQAGGGLVVAVVVKYTDNIRKSFAAAVSIIISCIMSMFLFDFQPTLTFIIGAGCVCTSVFMYSRPPPSRGLPTFHK 1594
+ G + LK V +P + K+ +P+L+YT+QNNLL++ HLD AT V YQ KILTTALFSV++L +RLS +W +L LL +GVAL +L + TT + Q P++GF+ ++ A C SGFAGVYFE +LKGS+ ++W+RN+Q+ + S+ + + V++ DW V++ GFFHGY+ VV V++LQA GGL+VAVVV+Y DNI K F+ +++I++SC++S+++F+FQ T F+ GA V S F+YSR PPS +P +K
Sbjct: 85 DEGSIKKLLIALKKTVISQPLDTFKVAIPSLVYTVQNNLLYVGATHLDAATCQVTYQLKILTTALFSVVMLKRRLSMYQWIALFLLFIGVALVQLAQLTTAKT---SNSTHTQKPLVGFFAIVIACCLSGFAGVYFEKILKGSEITVWMRNVQLCVTSIPVGLFMVYVIDWNEVSTKGFFHGYNTVVWYVIMLQAFGGLIVAVVVRYADNILKGFSTSLAIVLSCVISVYVFNFQLTSKFVCGASLVICSTFLYSRYPPS--VPAVYK 347 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig83894.16001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig83894.16001.1 >prot_H-elongata_contig83894.16001.1 ID=prot_H-elongata_contig83894.16001.1|Name=mRNA_H-elongata_contig83894.16001.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=298bp MYTTSLRPTQESGGSRAFFKKLKLEVARKPREVAKLTVPALLYTLQNNLLback to top mRNA from alignment at H-elongata_contig83894:1071..2769+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig83894.16001.1 ID=mRNA_H-elongata_contig83894.16001.1|Name=mRNA_H-elongata_contig83894.16001.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1699bp|location=Sequence derived from alignment at H-elongata_contig83894:1071..2769+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig83894:1071..2769+ >mRNA_H-elongata_contig83894.16001.1 ID=mRNA_H-elongata_contig83894.16001.1|Name=mRNA_H-elongata_contig83894.16001.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1788bp|location=Sequence derived from alignment at H-elongata_contig83894:1071..2769+ (Himanthalia elongata Himel1 dioecious)back to top |