mRNA_H-elongata_contig83464.15981.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig83464.15981.1 vs. uniprot
Match: D7FJG4_ECTSI (Prefoldin subunit, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG4_ECTSI) HSP 1 Score: 102 bits (255), Expect = 1.570e-26 Identity = 51/66 (77.27%), Postives = 63/66 (95.45%), Query Frame = 1
Query: 1 NRMVMETLEPMDATRRAYRLVGGVLVERTVGEVLPTVRANEEGIKQVLQQLAKSQADKEKAAAEWK 198
++MV++TLEP++ TRRAYRLVGGVLVERTVGEVLPTV+AN+EGIKQ+LQQLA ++A+KEK AAEWK
Sbjct: 52 HQMVVDTLEPLEGTRRAYRLVGGVLVERTVGEVLPTVKANQEGIKQLLQQLATTRANKEKEAAEWK 117
BLAST of mRNA_H-elongata_contig83464.15981.1 vs. uniprot
Match: A0A7S0CI05_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CI05_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 6.780e-17 Identity = 38/66 (57.58%), Postives = 51/66 (77.27%), Query Frame = 1
Query: 1 NRMVMETLEPMDATRRAYRLVGGVLVERTVGEVLPTVRANEEGIKQVLQQLAKSQADKEKAAAEWK 198
+R+V +TL+P++ TRRAYRLVGGVLVERTVGE+LP V N+E I+ VL L K+ K+K ++WK
Sbjct: 70 HRLVEDTLKPLETTRRAYRLVGGVLVERTVGEILPAVTTNKENIQMVLDNLQKNMEAKQKETSDWK 135
BLAST of mRNA_H-elongata_contig83464.15981.1 vs. uniprot
Match: K3WSV0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSV0_GLOUD) HSP 1 Score: 73.6 bits (179), Expect = 2.190e-15 Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 1
Query: 10 VMETLEPMDATRRAYRLVGGVLVERTVGEVLPTVRANEEGIKQVLQQLAKSQADKEKAAAEW 195
V++TL+ + ATR+AYR+VGGVLVERTV EVLP V +N +GI QVL QL +S KE++A EW
Sbjct: 41 VIQTLKDLPATRKAYRMVGGVLVERTVAEVLPAVTSNRDGIAQVLTQLNESIKQKEESANEW 102
BLAST of mRNA_H-elongata_contig83464.15981.1 vs. uniprot
Match: A0A5D6XZ09_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZ09_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 3.190e-15 Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 1
Query: 10 VMETLEPMDATRRAYRLVGGVLVERTVGEVLPTVRANEEGIKQVLQQLAKSQADKEKAAAEW 195
V++TL+ + R+AYR+VGGVLVERTV EVLP V AN +GI QVL QL +S KEK+A +W
Sbjct: 42 VLQTLQGLPGARKAYRMVGGVLVERTVAEVLPAVSANRDGIAQVLAQLGESLKQKEKSADDW 103
BLAST of mRNA_H-elongata_contig83464.15981.1 vs. uniprot
Match: A0A835YP58_9STRA (Putative prefoldin subunit (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP58_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 3.710e-15 Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 7 MVMETLEPMD--ATRRAYRLVGGVLVERTVGEVLPTVRANEEGIKQVLQQLAKSQADKEKAAAEWK 198
+VMETLE ++ RRA+RLVGGVLVERTV +VLP+V+AN GIKQVL LA KE+AAA WK
Sbjct: 36 LVMETLEKVEEKTKRRAFRLVGGVLVERTVADVLPSVQANHAGIKQVLGHLATDLRAKEEAAAAWK 101
BLAST of mRNA_H-elongata_contig83464.15981.1 vs. uniprot
Match: L8GFE5_ACACA (Prefoldin subunit 2, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GFE5_ACACA) HSP 1 Score: 72.4 bits (176), Expect = 1.100e-14 Identity = 39/66 (59.09%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 1 NRMVMETLEPMDATRRAYRLVGGVLVERTVGEVLPTVRANEEGIKQVLQQLAKSQADKEKAAAEWK 198
+R+V++ + +DA RR YRLVGGVLVERTVGEVLP VR N EGI+Q+L+ L S K+KA E+K
Sbjct: 38 HRLVIDAVSGLDAGRRCYRLVGGVLVERTVGEVLPAVRKNLEGIEQILKTLNASLLQKDKALNEFK 103
BLAST of mRNA_H-elongata_contig83464.15981.1 vs. uniprot
Match: A0A7S2R7M0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R7M0_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.310e-14 Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 1 NRMVMETLEPMDATRRAYRLVGGVLVERTVGEVLPTVRANEEGIKQVLQQLAKSQADKEKAAAEWK 198
+++V +TL P+D RRA+RLVGGVLVERTV EVLP+VR+N E + V+ + + D++K AEWK
Sbjct: 42 HKLVEQTLAPIDDNRRAFRLVGGVLVERTVSEVLPSVRSNRENLDSVIASMEQRLKDRQKETAEWK 107
BLAST of mRNA_H-elongata_contig83464.15981.1 vs. uniprot
Match: K0S7I7_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S7I7_THAOC) HSP 1 Score: 71.6 bits (174), Expect = 1.770e-14 Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 1 NRMVMETLEPMDATRRAYRLVGGVLVERTVGEVLPTVRANEEGIKQVLQQLAKSQADKEKAAAEWK 198
+R+V ETLEPMD RRA+RLVGGVLVERT+ EVLPTV N + + +++Q+ K+K +EWK
Sbjct: 43 HRLVEETLEPMDPDRRAFRLVGGVLVERTIREVLPTVTENRKRLDDLIEQVKTQMEAKQKDVSEWK 108
BLAST of mRNA_H-elongata_contig83464.15981.1 vs. uniprot
Match: A0A3M6VHU8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHU8_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 3.490e-14 Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 1
Query: 10 VMETLEPMDATRRAYRLVGGVLVERTVGEVLPTVRANEEGIKQVLQQLAKSQADKEKAAAEW 195
V++TL + R+AYR++GGVLVERTV EVLP V+AN +GI QVL+QL +S KEK A EW
Sbjct: 41 VIQTLTELPNGRKAYRMIGGVLVERTVQEVLPAVKANRDGIAQVLKQLNESIKHKEKTADEW 102
BLAST of mRNA_H-elongata_contig83464.15981.1 vs. uniprot
Match: A0A7S2UDR3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDR3_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 3.950e-14 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 1 NRMVMETLEPMDATRRAYRLVGGVLVERTVGEVLPTVRANEEGIKQVLQQLAKSQADKEKAAAEWK 198
+R+V ETL+P+D RRA+RLVGGVLVERTVGEVLP+V N + +V++ L K+K A WK
Sbjct: 14 HRLVEETLKPLDPDRRAFRLVGGVLVERTVGEVLPSVMTNRSNLDEVVKTLQTRLETKQKETAAWK 79 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig83464.15981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig83464.15981.1 >prot_H-elongata_contig83464.15981.1 ID=prot_H-elongata_contig83464.15981.1|Name=mRNA_H-elongata_contig83464.15981.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp MVMETLEPMDATRRAYRLVGGVLVERTVGEVLPTVRANEEGIKQVLQQLAback to top mRNA from alignment at H-elongata_contig83464:1741..1938- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig83464.15981.1 ID=mRNA_H-elongata_contig83464.15981.1|Name=mRNA_H-elongata_contig83464.15981.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=198bp|location=Sequence derived from alignment at H-elongata_contig83464:1741..1938- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig83464:1741..1938- >mRNA_H-elongata_contig83464.15981.1 ID=mRNA_H-elongata_contig83464.15981.1|Name=mRNA_H-elongata_contig83464.15981.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=384bp|location=Sequence derived from alignment at H-elongata_contig83464:1741..1938- (Himanthalia elongata Himel1 dioecious)back to top |