mRNA_H-elongata_contig83299.15969.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig83299.15969.1 vs. uniprot
Match: A0A6H5KYG4_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYG4_9PHAE) HSP 1 Score: 298 bits (763), Expect = 2.250e-100 Identity = 137/153 (89.54%), Postives = 146/153 (95.42%), Query Frame = 1
Query: 1 MCSSWVSHFPKDWEHAKRTGLGMNQYELSKNEQLEGYNVKDLNVDPKFPYEDNSFDVVTCVVSVDYLNKPLEVFREIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYSGGFEPPEAHDISPNPGRSDPMYIVEGRKKA 459
+CSSWVSHFPKDWEH KRTGLGMN++ELSKN QL+ Y VKDLNVD KFP++DNSFDVVTCVVSVDYLNKPLEVF EIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHY+GGF+PP +HDISPNPGRSDPMYIVEGRKKA
Sbjct: 125 ICSSWVSHFPKDWEHGKRTGLGMNEFELSKNVQLDEYRVKDLNVDAKFPFDDNSFDVVTCVVSVDYLNKPLEVFNEIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYAGGFDPPVSHDISPNPGRSDPMYIVEGRKKA 277
BLAST of mRNA_H-elongata_contig83299.15969.1 vs. uniprot
Match: A0A6V1S5I5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S5I5_HETAK) HSP 1 Score: 257 bits (657), Expect = 2.250e-84 Identity = 115/152 (75.66%), Postives = 134/152 (88.16%), Query Frame = 1
Query: 1 MCSSWVSHFPKDWEHAKRTGLGMNQYELSKNEQLEGYNVKDLNVDPKFPYEDNSFDVVTCVVSVDYLNKPLEVFREIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYSGGFEPPEAHDISPNPGRSDPMYIVEGRKK 456
+CSSWVSHFP+ W+H +R+G GMN+YELSKN QL+ Y V+DLNV P+ PYED SFD+VTCVVSVDYLN+PL +F E+RRVLRPGG+A+MSMSNRCFPTKAI IW QTND+EH+FIVGSYFHY+GGF PEA DISPNPGRSDPMYIV+ KK
Sbjct: 114 ICSSWVSHFPEGWKHGRRSGTGMNEYELSKNPQLDDYFVRDLNVRPELPYEDESFDLVTCVVSVDYLNQPLAIFDEVRRVLRPGGRAVMSMSNRCFPTKAINIWLQTNDLEHLFIVGSYFHYAGGFNAPEALDISPNPGRSDPMYIVQATKK 265
BLAST of mRNA_H-elongata_contig83299.15969.1 vs. uniprot
Match: A0A7S2XQM1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQM1_9STRA) HSP 1 Score: 245 bits (626), Expect = 2.560e-81 Identity = 109/153 (71.24%), Postives = 129/153 (84.31%), Query Frame = 1
Query: 1 MCSSWVSHFPKDWEHAKRTGLGMNQYELSKNEQLEGYNVKDLNVDPKFPYEDNSFDVVTCVVSVDYLNKPLEVFREIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYSGGFEPPEAHDISPNPGRSDPMYIVEGRKKA 459
+CSSWVSHFP +W+ GLGMN+YELS+N+QL YNVKDLN DP FPYEDNSFD +TCVVSVDYLNKP E+F EI RVLRPGG+ +++MSNRCFPTKA +IW QTNDMEHIFI GS+FH+SG FEPP DISPNPGRSDP++IV+ ++ A
Sbjct: 1 ICSSWVSHFPPEWKGGNVVGLGMNEYELSQNKQLSSYNVKDLNKDPTFPYEDNSFDRITCVVSVDYLNKPQEIFNEIGRVLRPGGECMLAMSNRCFPTKAFRIWLQTNDMEHIFIAGSFFHFSGFFEPPSCDDISPNPGRSDPLFIVKAKRSA 153
BLAST of mRNA_H-elongata_contig83299.15969.1 vs. uniprot
Match: A0A7S2FU79_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FU79_9STRA) HSP 1 Score: 245 bits (625), Expect = 1.440e-80 Identity = 115/154 (74.68%), Postives = 132/154 (85.71%), Query Frame = 1
Query: 1 MCSSWVSHFPKDWE--HAKRTGLGMNQYELSKNEQLEGYNVKDLNVDPKFPYEDNSFDVVTCVVSVDYLNKPLEVFREIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYSGGFEPPEAHDISPNPGRSDPMYIVEGRKK 456
+CSSWVSHFP++ + KRTGLGMN YELS+N+QL+ Y KDLNVD FP+EDN++D+VTCVVSVDYLN+P E+F EI RVL+PGG AIMSMSNRCFPTKAIQIW QTND+EH+FIVGSYFHY GGFEPP A DISP PGRSDPM IV+G KK
Sbjct: 42 ICSSWVSHFPEEIPSGYGKRTGLGMNDYELSQNKQLDDYVAKDLNVDAVFPFEDNTYDIVTCVVSVDYLNRPKEIFEEIHRVLKPGGCAIMSMSNRCFPTKAIQIWLQTNDLEHVFIVGSYFHYQGGFEPPFAKDISPAPGRSDPMLIVQGVKK 195
BLAST of mRNA_H-elongata_contig83299.15969.1 vs. uniprot
Match: A0A7S2NQ14_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NQ14_9STRA) HSP 1 Score: 241 bits (615), Expect = 4.200e-79 Identity = 108/152 (71.05%), Postives = 125/152 (82.24%), Query Frame = 1
Query: 1 MCSSWVSHFPKDWEHAKRTGLGMNQYELSKNEQLEGYNVKDLNVDPKFPYEDNSFDVVTCVVSVDYLNKPLEVFREIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYSGGFEPPEAHDISPNPGRSDPMYIVEGRKK 456
+CSSWVSH+P +W+ GLGMN+YELS+N+QL YNVKDLN DP FPYEDNSFD VTCVVS+DYLNKP +VF EI RVLRPGG +++MSNRCFPTKA +IW TND+EHIFI GS+FHYSG F+PP DISPNPG SDPMYIV+ KK
Sbjct: 38 ICSSWVSHYPTEWKGGNVVGLGMNEYELSQNKQLSSYNVKDLNEDPTFPYEDNSFDKVTCVVSIDYLNKPKQVFAEIARVLRPGGTCMLAMSNRCFPTKAFRIWLMTNDLEHIFIAGSFFHYSGFFDPPSCDDISPNPGMSDPMYIVKASKK 189
BLAST of mRNA_H-elongata_contig83299.15969.1 vs. uniprot
Match: A0A7S1D8M0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D8M0_CYCTE) HSP 1 Score: 234 bits (598), Expect = 2.420e-76 Identity = 105/153 (68.63%), Postives = 126/153 (82.35%), Query Frame = 1
Query: 1 MCSSWVSHFPKDWEHAKRTGLGMNQYELSKNEQLEGYNVKDLNVDPKFPYEDNSFDVVTCVVSVDYLNKPLEVFREIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYSGGFEPPEAHDISPNPGRSDPMYIVEGRKKA 459
+CSSWVSH+PK+W+ GLGMN+YELS+N QL ++VKDLN DP PYED SFD +TCVVSVDYLNKP E+F EI RVLRPGG+ +++MSNRCFPTKA QIW QTND+EHIFI GS+FHY+ FEPP DISPNPG SDP+YIV+ ++KA
Sbjct: 50 ICSSWVSHYPKNWKGGNVVGLGMNEYELSQNPQLSSFDVKDLNSDPTLPYEDQSFDRITCVVSVDYLNKPREIFGEIGRVLRPGGECMLAMSNRCFPTKAFQIWLQTNDLEHIFIAGSFFHYTDLFEPPTCDDISPNPGLSDPLYIVKAKRKA 202
BLAST of mRNA_H-elongata_contig83299.15969.1 vs. uniprot
Match: A0A1E7ELA4_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ELA4_9STRA) HSP 1 Score: 234 bits (596), Expect = 1.110e-75 Identity = 107/152 (70.39%), Postives = 129/152 (84.87%), Query Frame = 1
Query: 1 MCSSWVSHFPKDWEHAKRTGLGMNQYELSKNEQLEGYNVKDLNVDPKFPYEDNSFDVVTCVVSVDYLNKPLEVFREIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYSGGFEPPEAHDISPNPGRSDPMYIVEGRKK 456
+CSSWVSH+PKD++ K GLGMN+YELS+N QL + VKDLN DP FP+ED+SFD VTCVVSVDYLNKPL+VF+EI RVLRPGG+ ++SMSNRCFPTKA +IW QT+D+EHIFI GS+FHYS F+ P DISPNPGRSDP+YIV+G +K
Sbjct: 76 ICSSWVSHYPKDFKGGKVVGLGMNEYELSQNPQLTDFVVKDLNADPVFPFEDSSFDKVTCVVSVDYLNKPLQVFKEIGRVLRPGGECLISMSNRCFPTKAFKIWLQTSDLEHIFITGSFFHYSDLFDVPSCSDISPNPGRSDPLYIVKGVRK 227
BLAST of mRNA_H-elongata_contig83299.15969.1 vs. uniprot
Match: A0A7S1ZWJ2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWJ2_TRICV) HSP 1 Score: 231 bits (589), Expect = 1.830e-75 Identity = 101/152 (66.45%), Postives = 123/152 (80.92%), Query Frame = 1
Query: 1 MCSSWVSHFPKDWEHAKRTGLGMNQYELSKNEQLEGYNVKDLNVDPKFPYEDNSFDVVTCVVSVDYLNKPLEVFREIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYSGGFEPPEAHDISPNPGRSDPMYIVEGRKK 456
+CSSW+SH+PKDW+ GLGMN+YELS+N+ L Y+V+DLN DP PY+D SFD VTCVVS+DYLNKP E+F EI RVLRPGG A++SMSNRCFPTKA IW QTND+EH+FIVGS+FHY+G FE D+SPNPGRSDPM++V +K
Sbjct: 18 LCSSWISHYPKDWKGGNVIGLGMNEYELSQNKVLTSYDVRDLNADPTLPYDDASFDKVTCVVSIDYLNKPKEIFAEIGRVLRPGGTALLSMSNRCFPTKAFNIWLQTNDLEHVFIVGSFFHYAGVFEEARCDDVSPNPGRSDPMFVVRATRK 169
BLAST of mRNA_H-elongata_contig83299.15969.1 vs. uniprot
Match: B8C942_THAPS (Methyltransf_11 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C942_THAPS) HSP 1 Score: 231 bits (589), Expect = 1.130e-74 Identity = 104/153 (67.97%), Postives = 126/153 (82.35%), Query Frame = 1
Query: 1 MCSSWVSHFPKDWEHAKRTGLGMNQYELSKNEQLEGYNVKDLNVDPKFPYEDNSFDVVTCVVSVDYLNKPLEVFREIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYSGGFEPPEAHDISPNPGRSDPMYIVEGRKKA 459
+CSSWVSHFPK+W+ GLGMN+YELS+NEQL + VKDLN DP FP+ D FD VTCVVSVDYLN+P ++F+EI RVLRPGG+ I+SMSNRCFPTKA +IW QTND+EHIFIVGS+FHY+G F+ DISPNPGRSDP++IV+ KK+
Sbjct: 71 ICSSWVSHFPKEWKGGNVVGLGMNEYELSQNEQLSSFVVKDLNKDPTFPFGDEEFDKVTCVVSVDYLNQPEKIFKEIARVLRPGGECIISMSNRCFPTKAFRIWLQTNDLEHIFIVGSFFHYAGQFDAATCEDISPNPGRSDPLFIVKAAKKS 223
BLAST of mRNA_H-elongata_contig83299.15969.1 vs. uniprot
Match: B5Y3G7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3G7_PHATC) HSP 1 Score: 231 bits (588), Expect = 1.880e-74 Identity = 103/152 (67.76%), Postives = 125/152 (82.24%), Query Frame = 1
Query: 1 MCSSWVSHFPKDWEHAKRTGLGMNQYELSKNEQLEGYNVKDLNVDPKFPYEDNSFDVVTCVVSVDYLNKPLEVFREIRRVLRPGGKAIMSMSNRCFPTKAIQIWNQTNDMEHIFIVGSYFHYSGGFEPPEAHDISPNPGRSDPMYIVEGRKK 456
+CSSWV H+P W+ K GLGMN+YELS+N L+ Y VKDLN +P P++DNSFD VTCVVSVDYLNKPLEVF+EI RVLRPGG+ I+SMSNRCFPTKA +IW QT+D+EH+FI GS+FHY+ F+PP DISPNPGRSDP++IV+ KK
Sbjct: 77 ICSSWVCHYPNQWKGGKVVGLGMNEYELSQNPVLDSYVVKDLNKEPTIPFDDNSFDKVTCVVSVDYLNKPLEVFQEIGRVLRPGGECILSMSNRCFPTKAFRIWLQTSDLEHVFIAGSFFHYAEKFDPPSGKDISPNPGRSDPLFIVKAAKK 228 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig83299.15969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig83299.15969.1 >prot_H-elongata_contig83299.15969.1 ID=prot_H-elongata_contig83299.15969.1|Name=mRNA_H-elongata_contig83299.15969.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=154bp MCSSWVSHFPKDWEHAKRTGLGMNQYELSKNEQLEGYNVKDLNVDPKFPYback to top mRNA from alignment at H-elongata_contig83299:2..2068+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig83299.15969.1 ID=mRNA_H-elongata_contig83299.15969.1|Name=mRNA_H-elongata_contig83299.15969.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2067bp|location=Sequence derived from alignment at H-elongata_contig83299:2..2068+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig83299:2..2068+ >mRNA_H-elongata_contig83299.15969.1 ID=mRNA_H-elongata_contig83299.15969.1|Name=mRNA_H-elongata_contig83299.15969.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=924bp|location=Sequence derived from alignment at H-elongata_contig83299:2..2068+ (Himanthalia elongata Himel1 dioecious)back to top |