mRNA_H-elongata_contig8292.15929.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 1.780e-10 Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 1
Query: 1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 141
LANLARRVLAIPA+QA+SERLFS G IV+K RN L+P V+LLV +
Sbjct: 157 LANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLL 203
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 2.140e-10 Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 1
Query: 1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 141
LA+LARRVL IPA QAQSER+FSS GL+V+K R R+ PE+V L+VF+
Sbjct: 494 LASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: T1EL11_HELRO (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EL11_HELRO) HSP 1 Score: 58.5 bits (140), Expect = 2.160e-10 Identity = 27/47 (57.45%), Postives = 39/47 (82.98%), Query Frame = 1
Query: 1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 141
+A +AR+ LAIPA+ A SE++FS +G I+++RRNRL PEHV+ LVF+
Sbjct: 8 IAKVARKYLAIPATSAPSEQIFSMSGQIINERRNRLKPEHVEQLVFL 54
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 2.360e-10 Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 1
Query: 1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 141
LANLARRVLAIPA+QA+SERLFS G IV+K RN L+P V+LLV +
Sbjct: 237 LANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 283
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: A0A8C6MBI1_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6MBI1_NOTFU) HSP 1 Score: 57.8 bits (138), Expect = 4.970e-9 Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 1
Query: 1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 141
LANLAR+ LAIP + SER+FS+ GL V++ R RL+P+HV LL+F+
Sbjct: 122 LANLARKYLAIPGTSVPSERVFSAAGLTVNRLRTRLTPDHVDLLIFL 168
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: UPI00148F4C44 (zinc finger BED domain-containing protein 1-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148F4C44) HSP 1 Score: 58.5 bits (140), Expect = 5.470e-9 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 1
Query: 1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 141
LA LAR+ L IPA+ SER+FSS GLIVS+ R+RL+PEHV L+F+
Sbjct: 186 LAKLARQYLCIPATSVPSERVFSSAGLIVSRLRSRLTPEHVDKLIFL 232
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 58.9 bits (141), Expect = 6.660e-9 Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 1
Query: 1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 141
LA LARRVLAIP+SQAQSER+FS+ GL V+ R+RL E+V+LLV++
Sbjct: 497 LAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYL 543
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: A0A1A7ZCN3_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A7ZCN3_NOTFU) HSP 1 Score: 55.8 bits (133), Expect = 6.800e-9 Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVF 138
LA+LA+ L +PA+ SERLFSS G IVSK+R LSPEH+ +L F
Sbjct: 47 LASLAKSYLCVPATSTPSERLFSSAGNIVSKKRTSLSPEHIDMLTF 92
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: UPI001895D86D (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI001895D86D) HSP 1 Score: 57.0 bits (136), Expect = 1.280e-8 Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 141
L N+AR L++PA+Q SERLFS+TG +V+ RR L PEHV+ LVFV
Sbjct: 140 LYNIARLYLSVPATQVSSERLFSTTGNVVTARREHLLPEHVEQLVFV 186
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Match: A0A1A8S4K3_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8S4K3_9TELE) HSP 1 Score: 57.8 bits (138), Expect = 1.680e-8 Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 1
Query: 1 LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFV 141
LANLAR+ LAIP + SER+FS+ GL V++ R RL+P+HV LL+F+
Sbjct: 329 LANLARKYLAIPGTSVPSERVFSAAGLTVNRLRTRLTPDHVDLLIFL 375 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8292.15929.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8292.15929.1 >prot_H-elongata_contig8292.15929.1 ID=prot_H-elongata_contig8292.15929.1|Name=mRNA_H-elongata_contig8292.15929.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp LANLARRVLAIPASQAQSERLFSSTGLIVSKRRNRLSPEHVQLLVFVback to top mRNA from alignment at H-elongata_contig8292:9250..9390+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8292.15929.1 ID=mRNA_H-elongata_contig8292.15929.1|Name=mRNA_H-elongata_contig8292.15929.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=141bp|location=Sequence derived from alignment at H-elongata_contig8292:9250..9390+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8292:9250..9390+ >mRNA_H-elongata_contig8292.15929.1 ID=mRNA_H-elongata_contig8292.15929.1|Name=mRNA_H-elongata_contig8292.15929.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=282bp|location=Sequence derived from alignment at H-elongata_contig8292:9250..9390+ (Himanthalia elongata Himel1 dioecious)back to top |