mRNA_H-elongata_contig8281.15920.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Match: D7FKF4_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF4_ECTSI) HSP 1 Score: 239 bits (610), Expect = 6.340e-77 Identity = 122/165 (73.94%), Postives = 143/165 (86.67%), Query Frame = 2
Query: 2 GDSFKRRTFTFGFGTGSESVEVRLKPEFDTVIAWRKKGQGET-ASWHEIDLNDVKTVEAKGRTGFVLTSKTGDILLDLETTEESNRDTWIEALSALMEEVRLNPQARMAQKSVKDRVKEQAQRQRHVAKRTIEMQQKKKEAEARKARYLQEMGGMQYTAVAMANR 493
GD FKRRTFTFGFGTG ES +VRLKP+FDTV+AWRKK +G+ WHEIDLND+KTVE KG V++SKTGD+LL+LE S RD+W+E+L A+ E+VRLNPQARMAQKSVKDR+K+QAQRQRH+AKRTIEMQQ KK+AEARKARYL+E GGMQYTA+AMANR
Sbjct: 35 GDLFKRRTFTFGFGTGHESTDVRLKPDFDTVLAWRKKSEGDKDKDWHEIDLNDIKTVEPKGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAVAEDVRLNPQARMAQKSVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANR 199
BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Match: A0A835ZIX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIX0_9STRA) HSP 1 Score: 136 bits (342), Expect = 3.320e-36 Identity = 77/178 (43.26%), Postives = 114/178 (64.04%), Query Frame = 2
Query: 17 RRTFTFGFGTGSESVEVRLKPEFDTVIAWRKK------GQGETASWHEIDLNDVKTVEAKGRTGFVLTSKTGDILLDLETTE-------------ESNRDTWIEALSALMEEVRLNPQARMAQKSVKDRVKEQAQRQRHVAKRTIEMQQKKKEAEARKARYLQEMGGMQYTAVAMANR 493
+++ FGFG+ S+ V VRL + +TV+ W++ G G A+W +IDL DVK V+ +G TG L S+ GD+LL+++ + RD W AL+ L E++R NPQ A +SV +RVKE A +Q+H A+R+IE+Q K++AEARKAR++ E GG++YTA+AMANR
Sbjct: 40 KKSSRFGFGSRSDKVTVRLSAQSETVLQWQRAAADEEAGGGGEAAWTDIDLTDVKIVDKRGETGLALVSRRGDLLLEVDMDSGTGXXXXXXXXXXXAQRDAWHAALTDLTEDLRRNPQRAEASRSVAERVKEAALKQKHFAQRSIELQAAKRDAEARKARFMAEAGGLKYTAMAMANR 217
BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Match: W4HBN3_9STRA (PH domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=W4HBN3_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.900e-25 Identity = 67/173 (38.73%), Postives = 103/173 (59.54%), Query Frame = 2
Query: 2 GDSFKRRTFTFGFGTGSESVEVRLKPEFDTVIAWRKKGQGETASWHEIDLNDVKTVEAKGRTGFVLTSKTGDILLDLETTEESNRDTWIEALSALMEEVRLNPQARMAQK-------SVKDRVKEQAQRQRHVAKRTIEMQQKKKEAEARKARYLQEMG--GMQYTAVAMANR 493
G +F R+ +TFG TG+ESV ++L + D ++ W Q + A +EI++ D+K+V G GF + S G++LL+L+ R W+ AL + EEVR + QK S+K VK+QA +Q + KR EM+Q++KEAE RK +++G GM++TA+AMANR
Sbjct: 26 GGAFTRKKYTFGLHTGTESVHLQLHADSDEILLWTSDKQADGAKPNEIEVGDIKSVLPSGTAGFQIYSMQGEVLLELDAESAEVRSEWVTALQWICEEVRRTQELNGTQKKHPASASSLKQMVKDQANKQAYWMKRQTEMKQREKEAEERK----KKVGAVGMKFTAMAMANR 194
BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Match: A0A6G0XQB8_9STRA (PH domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQB8_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.960e-24 Identity = 67/171 (39.18%), Postives = 100/171 (58.48%), Query Frame = 2
Query: 2 GDSFKRRTFTFGFGTGSESVEVRLKPEFDTVIAWRKKGQGETASWHEIDLNDVKTVEAKGRTGFVLTSKTGDILLDLETTEESNRDTWIEALSALMEEVRLNPQARMAQK-----SVKDRVKEQAQRQRHVAKRTIEMQQKKKEAEARKARYLQEMG--GMQYTAVAMANR 493
G F R+ +TFG T +ES+ ++L + D ++ W Q + A +EI++ +K+V G TGF + S G++LL+LE R W+ AL + EEVR N + K S+K VKEQA +Q + KR E++Q +KEAE RK +++G GM+YTA+AMANR
Sbjct: 26 GGVFSRKKYTFGLHTSTESIHLQLHADSDEILLWTSDKQPDDAKPNEIEVGSIKSVLPSGPTGFQIYSMQGEVLLELEAETAEMRSEWVTALQWICEEVRKNQEINGTAKHPVSSSLKQMVKEQANKQAYWMKRQQELKQLEKEAEERK----KKVGTVGMKYTAIAMANR 192
BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Match: A0A024URR6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024URR6_9STRA) HSP 1 Score: 104 bits (259), Expect = 4.080e-24 Identity = 65/173 (37.57%), Postives = 102/173 (58.96%), Query Frame = 2
Query: 2 GDSFKRRTFTFGFGTGSESVEVRLKPEFDTVIAWRKKGQGETASWHEIDLNDVKTVEAKGRTGFVLTSKTGDILLDLETTEESNRDTWIEALSALMEEVRLNPQARMAQK-------SVKDRVKEQAQRQRHVAKRTIEMQQKKKEAEARKARYLQEMG--GMQYTAVAMANR 493
G F R+ +TFG TG+E++ ++L + D ++ W Q + A +EI++ D+K+V G TGF + S GD+LL+L+ R W+ AL + EEVR + QK S+K VK+QA +Q + KR E++Q++ EAE RK +++G GM++TA+AMANR
Sbjct: 26 GGVFTRKKYTFGLHTGTETIHLQLHADSDEILLWTSDKQADGAKPNEIEVGDIKSVLPSGPTGFQIYSMQGDVLLELDAESAELRSEWVTALQWICEEVRRTQELNGTQKKHPASASSLKQMVKDQANKQAYWMKRQTELKQRELEAEERK----KKVGNVGMKFTAMAMANR 194
BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Match: A0A1W0A206_9STRA (PH domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A206_9STRA) HSP 1 Score: 101 bits (251), Expect = 5.900e-23 Identity = 64/171 (37.43%), Postives = 97/171 (56.73%), Query Frame = 2
Query: 2 GDSFKRRTFTFGFGTGSESVEVRLKPEFDTVIAWRKKGQGETASWHEIDLNDVKTVEAKGRTGFVLTSKTGDILLDLETTEESNRDTWIEALSALMEEVRLNPQARMAQK-------SVKDRVKEQAQRQRHVAKRTIEMQQKKKEAEARKARYLQEMGGMQYTAVAMANR 493
G F+R+ +TFG TGSE++ ++L E D ++ W + G + EI++ +K + G TGF + S GD+LL+LE R W+ AL + EEV+ + QK S+K VK+QA +Q + KR E++ ++KEAE RK + GM+YTA+AMANR
Sbjct: 26 GGVFQRKKYTFGLHTGSEAIHLQLHQESDEILLWTTESGGTKPN--EIEVGGIKAILPHGNTGFQILSMQGDVLLELEAETAEMRTQWVTALQFVCEEVQKEQERNGTQKKAPVTPTSLKQMVKDQANKQAYWHKRQQELKAREKEAEERKKKI--GASGMKYTAIAMANR 192
BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Match: A0A1V9ZP44_9STRA (PH domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZP44_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 6.350e-22 Identity = 64/171 (37.43%), Postives = 98/171 (57.31%), Query Frame = 2
Query: 2 GDSFKRRTFTFGFGTGSESVEVRLKPEFDTVIAWRKKGQGETASWHEIDLNDVKTVEAKGRTGFVLTSKTGDILLDLETTEESNRDTWIEALSALMEEVRLNPQARMAQK-------SVKDRVKEQAQRQRHVAKRTIEMQQKKKEAEARKARYLQEMGGMQYTAVAMANR 493
G FKR+ +TFG TG+E++ ++L D V+ W + G A +EI++ +K V +G + F L S GD+LL+L+ R W+ AL + EEV+ +A K S+K VK+QA +Q + KR E++Q++ EAE RK + + GM+YTA+AMANR
Sbjct: 26 GGVFKRKKYTFGLHTGTEAIHLQLHEASDEVLLWTAESSG--AKPNEIEVGGIKAVLPQGPSSFQLLSMQGDVLLELDAESAELRTQWVTALQFVCEEVQKEQEANGTTKKAPVTPSSLKQMVKDQANKQAYWHKRQQELKQREAEAEERKKKV--GVAGMKYTAIAMANR 192
BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Match: A0A3F2RRR2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRR2_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.720e-14 Identity = 55/171 (32.16%), Postives = 94/171 (54.97%), Query Frame = 2
Query: 2 GDSFKRRTFTFGFGTGSESVEVRLKPEFDTVIAWRKKGQGETASWHEIDLNDVKTVEAKGRTGFVLTSKTGDILLDLETTEESNRDTWIEALSALMEEVRLNPQARMA-------QKSVKDRVKEQAQRQRHVAKRTIEMQQKKKEAEARKARYLQEMGGMQYTAVAMANR 493
G F R+ G TG+E + ++L + T++ W+ + A+ +IDL++V ++A+G+TG +TS+ GD+L+D+E E RDTW+ L + E+ + +K V+DR K+Q + AKRT E++Q+K ++ GM+YTA+AM+NR
Sbjct: 27 GAYFLRKKTILGLSTGTERIHIKLDEDGHTLL-WKLHDSIKNAT--KIDLHNVNLIQAQGKTGLTITSRKGDVLMDVEADSEEIRDTWVTHLQMVCEDNGASDDTEEEVQSGLKFRKMVEDRSKKQV----YWAKRTQELEQRKXXXXXXXKKFAGV--GMKYTALAMSNR 188
BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Match: K3X3Z1_GLOUD (PH domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3Z1_GLOUD) HSP 1 Score: 67.0 bits (162), Expect = 1.840e-10 Identity = 47/127 (37.01%), Postives = 70/127 (55.12%), Query Frame = 2
Query: 143 IDLNDVKTVEAKGRTGFVLTSKTGDILLDLETTEESNRDTWIEALSALMEE----------VRLNPQARMAQKSVKDRVKEQAQRQRHVAKRTIEMQQKKKEAEARKARYLQEMGGMQYTAVAMANR 493
IDL+DV +E G GF + S+ G+ LLDLE E R+ W+ L L E+ + A +K V+D+ K+QA + AKRT E++ +K+ AE RK ++ G++YTA+AM NR
Sbjct: 24 IDLHDVNLIETSGAQGFSIVSQKGETLLDLEAENEEVRNNWVTNLQLLCEDSGDIDDAAGAAVSSDVASKFRKMVEDKAKKQA----YWAKRTQELEDRKRNAEERKKQF--SGAGLKYTAIAMTNR 144
BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Match: A0A7S1XNI3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNI3_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.640e-5 Identity = 55/179 (30.73%), Postives = 84/179 (46.93%), Query Frame = 2
Query: 2 GDSFKRRTF-TFGFGTGSESVEVRLKPEFDTVIAWRKKGQGETASWHEIDLNDVK-TVEAKGRTGFVLTSKTGDI--LLDLETTEESNRDTWIEALSALMEEVRLNPQARMAQKSVKDRVK-----------EQAQRQRHVAKRTIEMQQKKKEAEARKARYLQEMGGMQYTAVAMANR 493
G FKR T G SE V V+L E + WRK G G + + I ++ +K VE + G L T + LL++ W AL L ++ A ++ ++ V ++A R AKR +E+ +K+AEARKA+Y++E GG+++TA AMA R
Sbjct: 33 GAVFKRPTVGMMGISLASEQVHVQLT-EDRVALLWRKDGSG--GAPNIIQISAIKRVVEMPDKHGLTLYGSTDNSQPLLEMHAPSRVQYLVWSTALGELYAAAQVAAAAGGGARTTENPVSTDPKDLQTSMADKAARTARFAKRDMEITAARKQAEARKAKYMKESGGLRFTAQAMAER 208 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8281.15920.1 >prot_H-elongata_contig8281.15920.1 ID=prot_H-elongata_contig8281.15920.1|Name=mRNA_H-elongata_contig8281.15920.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp MEEVRLNPQARMAQKSVKDRVKEQAQRQRHVAKRTIEMQQKKKEAEARKAback to top mRNA from alignment at H-elongata_contig8281:3433..5155- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8281.15920.1 ID=mRNA_H-elongata_contig8281.15920.1|Name=mRNA_H-elongata_contig8281.15920.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1723bp|location=Sequence derived from alignment at H-elongata_contig8281:3433..5155- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8281:3433..5155- >mRNA_H-elongata_contig8281.15920.1 ID=mRNA_H-elongata_contig8281.15920.1|Name=mRNA_H-elongata_contig8281.15920.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=426bp|location=Sequence derived from alignment at H-elongata_contig8281:3433..5155- (Himanthalia elongata Himel1 dioecious)back to top |