mRNA_H-elongata_contig8279.15918.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig8279.15918.1
Unique NamemRNA_H-elongata_contig8279.15918.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig8279.15918.1 vs. uniprot
Match: A0A6H5L823_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L823_9PHAE)

HSP 1 Score: 856 bits (2211), Expect = 3.320e-294
Identity = 476/771 (61.74%), Postives = 563/771 (73.02%), Query Frame = 1
Query:    1 DWNHPRRAAKETLSYLSQVEPVIDDFAEDDHSSTYGYSSKGGGGEDEDESDIGREQMLENVLDELEHQTASIMEDKHGSVVAEKIARRLTPLQLRIMLSRCRGYMLSLANNRYSSHVLQTLLSLVGQVVEAEISSPDLVTTISDTKNGNNH-SERSMYKGKDQVDLMQDIVLSLVAELKGTWAELMDDISGSHTGRGFLQVLGGLPILSERRGKQSRHAHSVGTAIGTGKFG-----SIPGSGQIGSQGSPLA--KVDPEAFERWSTPIKHRVPPSFEVALTDVTTEIVALPARELQTLACSTSGCPLFVMLLRVYANLAI-----EPASGR------LPSLEQESTAMDLVTQILQWEHEDQSAEVVFAMSGERTASHFLEAVLWLSPLAFFQGLYRRCFESRLLEFCEHGVSNFLIQAALQRVEDSAMAEAIVGAIGDLASDLLKARRAGVLWRAAQACVRLSLNPRIQTNLLQNLAGAVCAGHTGVVAPPSRVGDGVHTEAKRTASENYTKASSASNDPFKSAREWVPALLSPRVPEKESGGGKGLDRLFLNVPGARIVQNALLFDPHVAAPVVKAVAALPEVVLAAVARDNIGSRCLLDPILDEAAGGETVVGSVHGDKGKGRNKPAEDARRTILRSFRGHLVAMACDRVGWHVLLKCFRGVDMKEKR----------------------AIVEELASGGEHAWLRMSGYPSGRSVLTECMVERFSRSPREWEDAFKSKENRAKILDDILAIGSSTKASRDDKTRGK 2190
            +W HPRRAAKE +SYLSQVE VID +A+DDH       S GG         +GREQ+++N+L+EL+HQTASIMED+ GSVVAEK+ARRL+PLQLR MLSRCRGYMLSLANNRYSSHVLQTLLS+ GQVVE EIS  D      DT++        ++  G  ++D MQDI+L+LV+EL G WAEL  DISGSH GRGFLQVLGG+PILSE+RG+QSRHAHS+GTA+G  + G     +      +G++G   A   VD EA E+WSTP KHRVP SF  AL ++T+E+ ALPA ELQTLAC T GCPL VMLLRV+ NLA       P S        LP L+ ES AM +V ++L+W+ E++SA+VV+A+SGE TASHFLEAVLWLSP +FF+ LY RCFES LLEFCEHGVSNFLIQAALQR +D A+AE +V AI D AS+LLKARRAGVLWRAAQACVRL L P+ Q  +LQ++A AV AGHTG   PP   G+  + +A +      + +  +  D FK+AR WVPALLSPR+P     G  GLDRLFLNVPGARIVQNALLFDP VAAPV+KAVAALP+ VLAAVARDN+GSRCLLDPIL EAAG           KG  +NKPAE+ARR ILR+F+GHLVAMACDRV WH+L+KCFRGVDMKEKR                      AI EELA GGE +W RMSGYPSGRSVLTECMVERFSRSP EWEDAFK+++NRAKIL +ILA+ S++  S    T GK
Sbjct:   12 EWTHPRRAAKEIISYLSQVETVIDQYAQDDH-------SYGGAXXXXXXXXVGREQLMDNILEELKHQTASIMEDRQGSVVAEKMARRLSPLQLRTMLSRCRGYMLSLANNRYSSHVLQTLLSVAGQVVEDEISGDDDADEEGDTQHYEEEPGTAAVSDGSKKIDKMQDILLALVSELSGAWAELFADISGSHVGRGFLQVLGGMPILSEKRGRQSRHAHSIGTAVGPARMGGRGNNNHSNGSSVGAKGKASATPSVDSEALEKWSTPYKHRVPRSFVAALGEITSELEALPASELQTLACGTFGCPLLVMLLRVHGNLATATREDNPGSSSAAETMVLPCLKHESMAMKIVKKVLEWDDEERSAQVVYAISGENTASHFLEAVLWLSPRSFFEELYHRCFESNLLEFCEHGVSNFLIQAALQRADDKALAEKMVEAISDNASELLKARRAGVLWRAAQACVRLRLKPKTQAKILQDIALAVQAGHTGSALPPPPTGES-NPKAVQDKQAEASDSPPSIADAFKAARAWVPALLSPRLP-----GEGGLDRLFLNVPGARIVQNALLFDPPVAAPVLKAVAALPDDVLAAVARDNMGSRCLLDPIL-EAAGAR----GGGXXKGGAKNKPAEEARRAILRAFKGHLVAMACDRVAWHILVKCFRGVDMKEKRRDKNRTVQIHIVGSIRQQSSAGAIAEELAGGGEQSWSRMSGYPSGRSVLTECMVERFSRSPHEWEDAFKTRDNRAKILTEILAVESTSTTSTKKGTSGK 764          
BLAST of mRNA_H-elongata_contig8279.15918.1 vs. uniprot
Match: D8LQM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQM4_ECTSI)

HSP 1 Score: 762 bits (1967), Expect = 2.040e-262
Identity = 423/669 (63.23%), Postives = 500/669 (74.74%), Query Frame = 1
Query:    1 DWNHPRRAAKETLSYLSQVEPVIDDFAEDDHSSTYGYSSKGGGGEDEDESDIGREQMLENVLDELEHQTASIMEDKHGSVVAEKIARRLTPLQLRIMLSRCRGYMLSLANNRYSSHVLQTLLSLVGQVVEAEISSPDLVTTISDTKNGNNHSER-----SMYKGKDQVDLMQDIVLSLVAELKGTWAELMDDISGSHTGRGFLQVLGGLPILSERRGKQSRHAHSVGTAIGTGKFGSIP-----GSGQ-IGSQGSPLAK--VDPEAFERWSTPIKHRVPPSFEVALTDVTTEIVALPARELQTLACSTSGCPLFVMLLRVYANLAIEPASGR---LPSLEQESTAMDLVTQILQWEHEDQSAEVVFAMSGERTASHFLEAVLWLSPLAFFQGLYRRCFESRLLEFCEHGVSNFLIQAALQRVEDSAMAEAIVGAIGDLASDLLKARRAGVLWRAAQACVRLSLNPRIQTNLLQNLAGAVCAGHTGVVAPPSRVGDGVHTEAKRTASENYTKASSASNDPFKSAREWVPALLSPRVPEKESGGGKGLDRLFLNVPGARIVQNALLFDPHVAAPVVKAVAALPEVVLAAVARDNIGSRCLLDPILDEAAGGETVVGSVHGDKGKGRNKPAEDARRTILRSFRGHLVAMACDRVGWHVLLKCFRGVDMKEKR 1959
            +W HPRRAAKE +SYLSQVE VID +A+DDH       S GG         +GREQ+++N+L+EL+HQTASIMED+ GSVVAEK+ARRL+PLQLR ML RCRGYMLSLANNRYSSHVLQTLLS+ GQVVE EIS  D      D      H E      ++  G  ++D MQDI+LSLV+EL G WAEL  DISGSH GRGFLQVLGG+P+LSE+RG+QSRHAHS+GTA+G  + G        G+G  +G++G   A   VDPEA E+WSTP KHRVP SF  AL +VT+E+ ALPA ELQTLAC T GCPL VMLLRV+ NLA   ++     LP LE ES AM +V ++L+W+ +++SA+VV+A+SGE TASHFLEAVLWLSP +FF+ LY RCFES+LLEFCEHGVSNFLIQAALQR +D A+AE +V AI D AS+LLKARRAGVLWRAAQACVRL L P+ Q  +LQ++A AV AGHTG   PP+   +      +  A+ + +  S A  D FK+AR WVPALLSPR+P     G  GLDRLFLNVPGARI+QNALLFDP VAAPV+KAVAALP+ VLAAVARDN+GSRCLLDPIL EAAG           K    NKPAE+ARR ILR+F+GHLVAMACDRV WH+LLKCFRGVDMKEKR
Sbjct:   12 EWTHPRRAAKEIISYLSQVETVIDQYAQDDH-------SYGGAXXXXXXXXVGREQLMDNILEELKHQTASIMEDRQGSVVAEKMARRLSPLQLRTMLGRCRGYMLSLANNRYSSHVLQTLLSVAGQVVEDEISGDDDADEXXDAAQ---HYEEDPGTAAVSDGSKKIDKMQDILLSLVSELSGAWAELFADISGSHVGRGFLQVLGGMPVLSEKRGRQSRHAHSIGTAVGPARMGGRSNNNNHGNGSSVGAEGKSSASPAVDPEALEKWSTPYKHRVPRSFVAALGEVTSELEALPASELQTLACGTFGCPLLVMLLRVHGNLATASSAAETMVLPCLEHESMAMKIVKKVLEWDDQERSAQVVYAISGENTASHFLEAVLWLSPRSFFEELYHRCFESKLLEFCEHGVSNFLIQAALQRADDKALAEKMVEAISDNASELLKARRAGVLWRAAQACVRLRLKPKTQAKILQDIALAVQAGHTGSAPPPTPTDESNPKAEQDKAAASDSPPSIA--DAFKAARTWVPALLSPRLP-----GEGGLDRLFLNVPGARIMQNALLFDPPVAAPVLKAVAALPDDVLAAVARDNMGSRCLLDPIL-EAAGARGGXXXXXXXK----NKPAEEARRAILRAFKGHLVAMACDRVAWHILLKCFRGVDMKEKR 658          
BLAST of mRNA_H-elongata_contig8279.15918.1 vs. uniprot
Match: A0A835YK18_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK18_9STRA)

HSP 1 Score: 315 bits (808), Expect = 6.080e-87
Identity = 283/955 (29.63%), Postives = 376/955 (39.37%), Query Frame = 1
Query:    1 DWNHPRRAAKETLSYLSQVEPVIDDFAEDDHSSTYGYSSKGGGGEDEDESDIGREQMLENVLDELEHQTASIMEDKHGSVVAEKIARRLTPLQLRIMLSRCRGYMLSLANNRYSSHVLQTLLSLVGQVVEAEISSPDLVTTISDTKNGNNHSERSMYKGKDQVDLMQDIVLSLVAELKGTWAELMDDISGSHTGRGFLQ---------------------------------------------------------------VLGGLPILSERRGKQSRHAHSVGTAIGTGKFGSIPGSGQIGS-----------------------------QGSPLAKVDPEAFERW---STPIKHRVPPSFEVALTDVTTEIVALPARELQT---------------------------------LACSTSGCPLFVMLLRVYANLAIE----------------------------------PASGRLPSLEQESTAMDLVTQILQWEHEDQSAEV-VFAMSGERTASHFLEAVLWLSPLAFFQGLYRRCF---ESRLLEFCEHGV-----------------------------------------------------SNFLIQAALQRVEDSAMAEAIVGAIGDLASDLLKARRAGVLWRAAQACVRLSLNPRIQTNLLQNLAGAVCAGHTGVVAPPSRVGDGVHTEAKRTASENYTKASSASNDPFKSAREWVPALLSPRVPEKES------------------GGGKGLDRLFLNVPGARIVQNALLFDPHVAAPVVKAVAALPEVVLAAVARDNIGSRCLLDPILDEAAGGETVVGSVHGDKGKGRNKPAE-----DARRTILRSFRGHLVAMACDRVGWHVLLKCFRGVDMKEKRAIVEELASGGEHAWLRMSGYPSGRSVLTECMVERFSRSPREWEDAFKSKENRAKILDDIL 2139
            +WNHPRRAA ET++YL+Q+  V+++    D ++            DED  ++   Q++ NVL+EL+H TAS+ME + GS V E +ARR +PLQLR+ML RC GY+LS     YSSH LQT+LSL G V+  E  + ++       K+G         +G      M++IVL LV+E  G WAEL  D+SGSHT R  +Q                                                               VLGGLP+++ERRGK +RHAH++ TA  +     +  +   G                              Q    A+VD EA  +W   S      +P  F  AL  V  EI  LP   LQ                                  + C + GCP  V LLRV A+                                       A+  +P L        LV   LQW    ++    ++AM+GER  SHFLEA LWL P  F      R     E+ L E+C   V                                                     +NFL+QAALQRV D+A A A+  A        L  RRAGVLWRAAQAC RL L P                                                    D F +AR WVP L+  R+P  E+                    G    RL ++VP  R+V+N L F+  ++ PV KAV  L E +L AVA D + + CLLDP+ D A G  ++   +                  DARR +LR  +G + A+A  R G H+LLK +   D   KR I  ELA+    A      +  GR+VL ECMVERFSR P EWE A + +   A ++DDIL
Sbjct:    4 EWNHPRRAAAETITYLNQMRVVLENI---DPTAALADG-------DEDSDELSPAQVISNVLEELKHSTASVMEHREGSEVVETLARRASPLQLRVMLDRCCGYLLS-----YSSHCLQTMLSLAGAVIAQESHNVEV------EKDG---------EGGGGPPPMREIVLKLVSEAAGAWAELFRDVSGSHTARALIQQIGLKVVSEAAGVGGGVQGRERQPHGAGADDSAWAEVFRGVSGGHTGACADTAAWHATAIATYVLGGLPVMAERRGKAARHAHNIATAQFSSNTPKVAPAAAAGGRVTLQQLAQAQMECWHAXXXXXXXXXXXXQQLAQAQVDAEASAKWGWGSAQQGGSLPREFHEALDAVVQEISDLPRESLQVRCVASRCIALLSITIPMAAXXXXXXXXXXXXXAMTCHSCGCPALVTLLRVVAHAESSGDDASDGSXXXXXXXXXXXXXXHDSTLVSSFHGSTAAAAVPRLRGGGAGALLVEHALQWNDAAEACSAALYAMAGERAGSHFLEAALWLGPEGFADEACARMGLTEEAALREYCADDVXXXXXXXXXXXXXXXXXXXXXRVVFRGGFADEXXXXXXXXXXXXXXXXXXXXVANFLVQAALQRVSDAATAGAMARAXXXXXXXXLATRRAGVLWRAAQACARLRLPP----------------AQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAFAAARAWVPRLIKLRLPSAEAQXXXXXXXXXXXXXXXXXXAGVRAGRLAMDVPCVRMVENVLRFEGALSGPVAKAVTGLSEEMLEAVACDGLAACCLLDPLFDVATGALSLAPPLPSXXXXXXXXXXXXXXXADARRALLRRLKGRMAALARSRAGSHLLLKLWHFADAAGKRGIAAELAAARGLA-AAAEAHAGGRAVLRECMVERFSRDPAEWEAALERRGKHAALMDDIL 911          
BLAST of mRNA_H-elongata_contig8279.15918.1 vs. uniprot
Match: W7U019_9STRA (Armadillo-like helical n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U019_9STRA)

HSP 1 Score: 289 bits (740), Expect = 2.430e-79
Identity = 244/765 (31.90%), Postives = 364/765 (47.58%), Query Frame = 1
Query:    4 WNHPRRAAKETLSYLSQVEPVIDDFA------EDDHSSTYGYSSKGGGGEDEDESDIGREQML--ENVLDELEHQTASIMEDKHGSVVAEKIARRLTPLQLRIMLSRCRGYMLSLANNRYSSHVLQTLLSLVGQVVEAEI----SSPDLVTTISDTKNGNNHSERSMYKGKDQVDLMQDIVLSLVAELKGTWAELMDDISGSHTGRGFLQVLGGLPILSERRGKQSRHAHSVGTAIGTGKFGSIPGSGQIGSQGSPLAKVDPEAFERWSTP-IKHRVPPSFEVALTDVTTEIVALPARELQTLACSTSGCPLFVMLLRVYANLAIEPASGRLPSLEQESTAM-DLVTQILQWEHEDQSAEVVFAMSGERTASHFLEAVLW-LSPLAFFQGLYRRCFESRLLEFCEHGVSNFLIQAALQRVEDSAMAEAIVGAIGDLASDLLKARRAGVLWRAAQACVRLSLNPRIQTNLLQNLAGAVCAGHTGVVAPPSRVGDGVHTEAKRTASENYTKASSASNDPFKSAREWVPAL---LSPRVPEKESGGGKGLD---RLFLNVPGARIVQNALLFDPHVAAP------VVKAVAALPEVVLAAVARDNIGSRCLLDPILDEAAGGETVVGSV-----------------HGDKGKGR--NKPAEDARRTIL-----RSFRGHLVAMACDRVGWHVLLKCFR--GVDMKEKRAIVEELASGGEHAWLRMSGYPSGRSVLTECMVERFSRSPREWEDAFKSKENRAKILDDIL 2139
            ++ PRR   ETL+YL  +EPVID           +   T    ++    E E+E +   E+ L  +N++DEL  + AS+  D+H +   EK+AR  T  QL  +L  C GY   LA+NRYSSHVLQT LSL G ++EAE+       D    + D    +  SE       + + L  D    L  EL+ +W  L+ D+ G+H+ R F  +L G+P ++E+RG+ ++H H + TA+  G  G   G G + S      K   E     STP + HRVP      L ++ TE+  +  R+L    C     P   +L++  A    E A  +   L+ +      LV + L ++  D+ AEVV+AM+GE  +S FLEAVLW  +P      ++  C   R++EF E  V+NF++Q  LQR E     +A +  +      L++ RRAGVLWR A AC+RL           + +   V +G  G              E K+    N ++   A           V AL   L   V +    GG G +   RL LNVPGAR+ +  + F             + +AV  LP   L AVA DNIGSR LLDP+L  ++ G T +G+                   G+K K R  + P  D   + L     +  +GH  ++A   VG+H+L KCF   G+ ++ K+ +V+EL      A  R++G   GR  L E  V  +  +  +WE+A K  E + ++LDD+L
Sbjct:   29 YSRPRRPESETLTYLRSLEPVIDKSITALLQQNSNQRGTIVNDAQKRSQEVEEEENEAEERSLLVQNLIDELTFKVASLAMDRHAAPTLEKVARLCTRKQLAHLLHGCLGYAACLASNRYSSHVLQTFLSLTGPMLEAELLGIGEEEDRDEGLDDKPPFSTGSEIDEAAPGEGISLA-DTATKLAEELRASWLSLIFDLCGTHSMRAFFCLLAGMPAVAEKRGRHAKHKHGIETAVAVGYQGIGAGPGDVRS------KTQGETGNLHSTPLVMHRVPARLADILGEMVTELANMELRDLHQALCDPYASPALGLLVQAVARK--ESAVRQDFHLDTDGIFFKQLVAKALCFKDADRCAEVVYAMAGETMSSRFLEAVLWHTAPTQVAARIFEACIRGRVMEFAEDSVANFVLQTWLQRTESPEHLKAALDELAPRVRRLVETRRAGVLWRLAGACLRLRHGQ-------EEMVDGVVSGLGGAGG-----------ETKKEEGTNSSRLDMA-----------VLALQTGLELDVGQGHREGGHGTEHDRRLHLNVPGARLFECLMRFPTSSGKHRGSGWIICRAVLELPPETLVAVATDNIGSRTLLDPLLGASSAG-TELGAATIERRERSEGGGRTAENRGEKSKKRKTSDPHRDEINSSLADRLAQRLQGHYASLAAHPVGFHILTKCFSSSGLSLEWKKNVVQELID----AESRLAGGHFGRRALREVGVSLYRVNQAKWEEAQKEGERKKEVLDDLL 750          
BLAST of mRNA_H-elongata_contig8279.15918.1 vs. uniprot
Match: A0A1V9YHD7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YHD7_9STRA)

HSP 1 Score: 249 bits (635), Expect = 7.500e-68
Identity = 199/717 (27.75%), Postives = 323/717 (45.05%), Query Frame = 1
Query:   13 PRRAAKETLSYLSQVEPVIDDFAEDDHSSTYGYSSKGGGGEDEDESDIGREQMLENVLDELEHQTASIMEDKHGSVVAEKIARRLTPLQLRIMLSRCRGYMLSLANNRYSSHVLQTLLSLVGQVVEAEISSPDLVTTISDTKNGNNHSERSMYKGKDQVDLMQDIVLSLVAELKGTWAELMDDISGSHTGRGFLQVLGGLPILSERRGKQSRHAHSVGTAIGTGKFGSIPGSGQIGSQGSPLAKVDPEAFERWSTPIKHRVPPSFEVALTDVTTEIVALPARELQTLACSTSGCPLFVMLLRVYANLAIEPASGRLPSLEQESTAMDLVTQILQWEHEDQSAEVVFAMSGERTASHFLEAVLWLSPLAFFQGLYRRCFESRLLEFCEHGVSNFLIQAALQRVEDSAMAEAIVGAIGDLASDLLKARRAGVLWRAAQACVRLSLNPRIQTNLLQNLAGAVCAGHTGVVAPPSRVGDGVHTEAKRTASENYTKASSASNDPFKSAREWVPALLSPRVPEKESGGGKGLDRLFLNVPGARIVQNALLFDPHVAAPVVKAVAALPEVVLAAVARDNIGSRCLLDPILDEAAGGETVVGSVHGDKGKGRNKPAEDARRTILRSFRGHLVAMACDRVGWHVLLKCFRGVDMKEKRAIVEELASGGEHAWLRMSGYPSGRSVLTECMVERFSRSPREWEDAFKSKENRAKILDDILAIGSSTKA 2163
            PRR   +T +YL +V+  + +  +D              GED       +  +L NVL+E+  + AS   D+H   + E +   +TP QL   + +  GY   L  NRYSSHVLQ +LS VG +V+AE+   +        +   + +ERS       V  M  +++++  E+KG W  L++D+S SH  RG +  L G   ++E+RGK+ +H        G  +F ++P             K D E     + P    VP  F   LTD+   ++  P  +L  L       P   + +RV  +                +   DLV ++L W+ E+ S +  +  +G+  ASHFLEA+   +P   +  ++ RC + RLLEF EH +SN+++Q  +  V  +A AEA++  + D    LL   R GV+WR A+ CVR   +        ++L  AV                    E+K+ A+                 ++ VPAL++  +    S G     +L LNV GARIV+  L F   +  P+V+++  L  + L A+A+D++GSRCL++PI                      N    DA+  +   F+G   A+A DR G    +K F  +D++ K  I EEL +       +++G      VLT C V  F  +  +W   ++ K    ++  D++    +TKA
Sbjct:   17 PRRLEPDTTAYLLEVKTSLLENLDD--------------GEDT------KSLLLWNVLEEVAPRIASAASDRHACEIIEVLLEHMTPRQLCFFVHKMEGYYSHLWTNRYSSHVLQRILSKVGAIVQAEVEGTE--------ETSEDDAERSAG-----VPTMATLIVTMCEEVKGEWITLVNDVSASHVLRGVVCALAGRAPVAEKRGKKGKH--------GAVRFDNMP------------KKSDDEKLNAVAFP----VPAEFTSTLTDIVEVMMDAPDHKLGELMFDHHAGPFLSIAVRVCPD----------------ALRQDLVYRLLNWDDEEASKKRFYDYAGDTVASHFLEALCQTAPETLWTAVFERCLQGRLLEFSEHAISNYVVQNFIAHVPSAAQAEAVLDEMKDALWTLLSMHRPGVIWRLAECCVRYKTHFEA---FFKSLRAAV-----------------TKQESKKPAAVQ---------------KDVVPALIALEL----SSGATA--KLSLNVAGARIVETLLQFPATITGPLVESILGLNGLQLLALAKDSVGSRCLVEPIW---------------------NSDNTDAKVALFNKFKGQFAALAMDRNGAFSAIKGFNTMDLEHKMMIAEELMASDS----KLAGNHFASMVLTNCNVHEFKTNREKWISTYERKRKVKELFSDLVDDAKTTKA 594          
BLAST of mRNA_H-elongata_contig8279.15918.1 vs. uniprot
Match: A0A1W0A080_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A080_9STRA)

HSP 1 Score: 248 bits (632), Expect = 1.620e-67
Identity = 197/709 (27.79%), Postives = 317/709 (44.71%), Query Frame = 1
Query:   13 PRRAAKETLSYLSQVEPVIDDFAEDDHSSTYGYSSKGGGGEDEDESDIGREQMLENVLDELEHQTASIMEDKHGSVVAEKIARRLTPLQLRIMLSRCRGYMLSLANNRYSSHVLQTLLSLVGQVVEAEISSPDLVTTISDTKNGNNHSERSMYKGKDQVDLMQDIVLSLVAELKGTWAELMDDISGSHTGRGFLQVLGGLPILSERRGKQSRHAHSVGTAIGTGKFGSIPGSGQIGSQGSPLAKVDPEAFERWSTPIKHRVPPSFEVALTDVTTEIVALPARELQTLACSTSGCPLFVMLLRVYANLAIEPASGRLPSLEQESTAMDLVTQILQWEHEDQSAEVVFAMSGERTASHFLEAVLWLSPLAFFQGLYRRCFESRLLEFCEHGVSNFLIQAALQRVEDSAMAEAIVGAIGDLASDLLKARRAGVLWRAAQACVRLSLNPRIQTNLLQNLAGAVCAGHTGVVAPPSRVGDGVHTEAKRTASENYTKASSASNDPFKSAREWVPALLSPRVPEKESGGGKGLDRLFLNVPGARIVQNALLFDPHVAAPVVKAVAALPEVVLAAVARDNIGSRCLLDPILDEAAGGETVVGSVHGDKGKGRNKPAEDARRTILRSFRGHLVAMACDRVGWHVLLKCFRGVDMKEKRAIVEELASGGEHAWLRMSGYPSGRSVLTECMVERFSRSPREWEDAFKSKENRAKILDDIL 2139
            PRR   +T +YL +V+                 SS    G+DED++   +  +L NVL+EL  + AS   D+H   + E +  +++P QL   + +  GY   L  NRYSSHVLQ +LS VG +V+AE+    +V            SE    + KD V  M  +++++  E+K  W  L++DIS SH  R  L  LGG   ++E+RGK+ +H                   G I  +  P    D +A        K   PP+F   L ++   ++      L          P F M +RV                 QE  A D + ++L W+ E+ S +  +  +G+  ASHFLEA+   +  + +  +Y RC + RLLEF EH +SN+++Q  +Q V     AE I+  + D    LL   R GV+WR A+ CVR  +N +   N    LA AV                    E+K+ A+                 ++ VPAL++  +   ++       ++ LN+ GARI++  L F   +  P++ +V  +  + L A+A+D+IGSRC+++PI                      N   E A+ ++   F+G+   +A DR G   ++KCF  +++  K  I EELA        ++SG      VLT C V  F  +  +W   ++ K    ++  D++
Sbjct:   13 PRRLEPDTTAYLLEVK-----------------SSLLESGDDEDDT---KAILLWNVLEELAPRIASAASDRHACEIIEVLLEKMSPRQLCFFVHKMEGYYSHLWTNRYSSHVLQRILSKVGDIVQAEVEESLVV------------SEEDEERSKD-VPTMATLIVAMCQEVKNEWITLVNDISASHVLRSVLCALGGRTPVAEKRGKKGKH-------------------GAIRYENMPKKTDDEKALNE----SKFATPPAFADTLVEIIEVMMDASDDRLANFMFDHHAGPFFSMAVRV---------------CPQELRA-DCIKRLLNWDDEEVSKKRFYDYAGDTVASHFLEALSQCATPSMWTSVYERCLKGRLLEFSEHAISNYVVQNFIQYVPTKEQAEIILDEMKDSLWSLLSMHRPGVVWRLAECCVRFEINYK---NFFTTLAAAV-----------------TKQESKKPAAVQ---------------KDIVPALIALELSNSQNA------KISLNITGARIIETLLKFPSSIIEPLITSVLNMNSLQLTALAKDSIGSRCIIEPIW---------------------NSENEQAKISLFNKFKGNFGTLALDRNGAFSVIKCFNNMNLDYKTTITEELAEVDG----KLSGNHFSSMVLTHCNVHEFKTNHEKWVSTYERKRKVKELFSDLV 583          
BLAST of mRNA_H-elongata_contig8279.15918.1 vs. uniprot
Match: A0A067C117_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C117_SAPPC)

HSP 1 Score: 239 bits (611), Expect = 2.200e-64
Identity = 185/656 (28.20%), Postives = 293/656 (44.66%), Query Frame = 1
Query:   13 PRRAAKETLSYLSQVEPVIDDFAEDDHSSTYGYSSKGGGGEDEDESDIGREQMLENVLDELEHQTASIMEDKHGSVVAEKIARRLTPLQLRIMLSRCRGYMLSLANNRYSSHVLQTLLSLVGQVVEAEISSPDLVTTISDTKNGNNHSERSMYKGKDQVDLMQDIVLSLVAELKGTWAELMDDISGSHTGRGFLQVLGGLPILSERRGKQSRHAHSVGTAIGTGKFGSIPGSGQIGSQGSPLAKVDPEAFERWSTPIKHRVPPSFEVALTDVTTEIVALPARELQTLACSTSGCPLFVMLLRVYANLAIEPASGRLPSLEQESTAMDLVTQILQWEHEDQSAEVVFAMSGERTASHFLEAVLWLSPLAFFQGLYRRCFESRLLEFCEHGVSNFLIQAALQRVEDSAMAEAIVGAIGDLASDLLKARRAGVLWRAAQACVRLSLNPRIQTNLLQNLAGAVCAGHTGVVAPPSRVGDGVHTEAKRTASENYTKASSASNDPFKSAREWVPALLSPRVPEKESGGGKGLDRLFLNVPGARIVQNALLFDPHVAAPVVKAVAALPEVVLAAVARDNIGSRCLLDPILDEAAGGETVVGSVHGDKGKGRNKPAEDARRTILRSFRGHLVAMACDRVGWHVLLKCFRGVDMKEKRAIVEELA 1980
            PRR   +T +YL +V+  + +   DD   T                      +L NVL+EL  + AS   D+H   + E +   ++P QL   + +  GY   L  NRYSSHVLQ +LS VG +V+AE+    L TT  D +   N            V  M  +++++  E+K  W  L+DD+S SH  RG L  L G   ++E+RGK+ +H        G  KF ++P             K D E        +++ VP +F   LTD+   ++  P  +L  L       P   + +RV  +                +   DLV ++L W+ E+ S +  +  +G+  ASHFLEA+   +    +  ++ RC +SRLLEF EH +SN+++Q  +  V  +A AE ++  + D    LL   R GV+WR A+ CVR  L+         +L  AV                                A   S  P    ++ VPAL++  +   ++       +L LNV GARIV+  L F   + AP+VK++  L  + L A+++D++GSRCL++PI                      N   ++A+  +   F+G    +A DR G   ++KCF  + ++ K  I EEL+
Sbjct:   16 PRRLEPDTTAYLLEVKTSLLESLGDDGDDTKSI-------------------LLWNVLEELAPRIASAASDRHACEIVEVLVEHMSPRQLSFFVHKMEGYYSHLWTNRYSSHVLQRILSKVGAIVQAEVDG-SLETTEDDDERSKN------------VPTMATLIVAMCTEVKDEWITLVDDVSASHVLRGVLCALAGRAPVAEKRGKKGKH--------GAVKFENLP------------KKSDDEKLNA----VQYTVPATFTSTLTDIVEVMMDAPDHKLAELMFDHHAGPFLSIAVRVCPD----------------ALRQDLVFRLLNWDDEESSKKRFYDYAGDTVASHFLEALCQTASEDLWTSVFDRCMQSRLLEFSEHAISNYVVQNFISHVPTAAYAEIVLDEMKDALWTLLSMHRPGVIWRLAECCVRFKLHFE---RFFNSLTAAV--------------------------------AKQESKKPAAVQKDVVPALIALELSNSQNA------KLSLNVAGARIVETLLQFPASITAPLVKSILGLNALQLVALSKDSVGSRCLVEPIW---------------------NSENDEAKIELFNKFKGQFGTLAMDRNGAFSVIKCFNTMSLEYKTMIAEELS 537          
BLAST of mRNA_H-elongata_contig8279.15918.1 vs. uniprot
Match: A0A485L964_9STRA (Aste57867_18085 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L964_9STRA)

HSP 1 Score: 224 bits (572), Expect = 3.150e-59
Identity = 183/657 (27.85%), Postives = 290/657 (44.14%), Query Frame = 1
Query:   13 PRRAAKETLSYLSQVEPVIDDFAEDDHSSTYGYSSKGGGGEDEDESDIGREQMLENVLDELEHQTASIMEDKHGSVVAEKIARRLTPLQLRIMLSRCRGYMLSLANNRYSSHVLQTLLSLVGQVVEAEISSPDLVTTISDTKNGNNHSERSMYKGKDQVDLMQDIVLSLVAELKGTWAELMDDISGSHTGRGFLQVLGGLPILSERRGKQSRHAHSVGTAIGTGKFGSIPGSGQIGSQGSPLAKVDPEAFERWSTPIKHRVPPSFEVALTDVTTEIVALPARELQTLACSTSGCPLFVMLLRVYANLAIEPASGRLPSLEQESTAMDLVTQILQWEHEDQSAEVVFAMSGERTASHFLEAVLWLSPLAFFQGLYRRCFESRLLEFCEHGVSNFLIQAALQRVEDSAMAEAIVGAIGDLASDLLKARRAGVLWRAAQACVRLSLNPRIQTNLLQNLAGAVCAGHTGVVAPPSRVGDGVHTEAKRTASENYTKASSASNDPFKSAREWVPALLSPRVPEKESGGGKGLDRLFLNVPGARIVQNALLFDPHVAAPVVKAVAALPEVVLAAVARDNIGSRCLLDPILDEAAGGETVVGSVHGDKGKGRNKPAEDARRTILRSFRGHLVAMACDRVGWHVLLKCFRGVDMKEKRAIVEELAS 1983
            PRR   +TLSYL +V            ++++  + K     D ++++  R  ML NVL+E+  + AS   D+H     E +   +T  QLR  L +  GY   L  NRYSSHVLQ LLS  G +V+ ++              G         +  D V     +++++  E++  W  L++D+S SH  R     L G   + E+RGK+ +H                     +  +    A  D              VPP+FE  L  +   ++  P  +L  L   T   P+  M +RV    AI+                 ++ ++L W  ED+S +  +  +G+  ASHFLEA+      A +  ++ RC ++RLLEF EH +SNF++Q  ++R     +AEAI+  + D    LL   R GV+WR A+ C +  L  +              A    VVA   +       EAK+               P  + ++  PAL+  ++   ++       RL LNVPGAR+V+  + F   V AP+V+++ A+  + L A+A+D  GSRCL++PI      GE +                 DA+  +   FRGH  ++  DR G   +LKCF  + + EK  I +ELA+
Sbjct:   23 PRRLEPDTLSYLEEV------------NASFLQNLK-----DNEDAETNR-MMLWNVLEEIAPRIASAASDRHACGFIEVLVEHMTAQQLRYFLHKMEGYFSHLWTNRYSSHVLQRLLSKAGPIVQRDV-------------RGEADDXXXXXRAAD-VPTFSALIVAMCTEVEAEWISLINDVSASHVMRAVFCALAGHAPVLEKRGKKGKHK-------------------ALAFEAKAGATFD--------------VPPTFEATLEAMLELVLESPDAKLAELMSDTHAGPVLSMAVRVAPTAAIQSK---------------VIYKLLSWHDEDRSKKRFYDYAGDSVASHFLEAICHAVDPAMWSAVFERCLQTRLLEFSEHPISNFVVQNFIERAPTQPLAEAILDELQDAVWSLLSMHRPGVVWRLAECCHKFHLREK--------------AFFKAVVAAVEK------QEAKK---------------PEAARKDLAPALIGLQLSNNQNA------RLTLNVPGARLVETLMKFPAGVTAPLVQSILAMNSLQLVALAKDATGSRCLVEPIWS----GEDM-----------------DAKLALFEQFRGHFGSLVLDRNGSFSVLKCFDALTITEKTVIADELAA 537          
BLAST of mRNA_H-elongata_contig8279.15918.1 vs. uniprot
Match: A0A6G0WJG9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJG9_9STRA)

HSP 1 Score: 189 bits (480), Expect = 3.790e-47
Identity = 141/530 (26.60%), Postives = 252/530 (47.55%), Query Frame = 1
Query:  169 MLENVLDELEHQTASIMEDKHGSVVAEKIARRLTPLQLRIMLSRCRGYMLSLANNRYSSHVLQTLLSLVGQVVEAEISSPDLVTTISDTKNGNNHSERSMYKGKDQVDLMQDIVLSLVAELKGTWAELMDDISGSHTGRGFLQVLGGLPILSERRGKQSRHAHSVGTAIGTGKFGSIPGSGQIGSQGSPLAKVDPEAFERWSTPIKHRVPPSFEVALTDVTTEIVALPARELQTLACSTSGCPLFVMLLRVYANLAIEPASGRLPSLEQESTAMDLVTQILQWEHEDQSAEVVFAMSGERTASHFLEAVLWLSPLAFFQGLYRRCFESRLLEFCEHGVSNFLIQAALQRVEDSAMAEAIVGAIGDLASDLLKARRAGVLWRAAQACVRLSLNPRIQTNLLQNLAGAVCAGHTGVVAPPSRVGDGVHTEAKRTASENYTKASSASNDPFKSAREWVPALLSPRVPEKESGGGKGLDRLFLNVPGARIVQNALLFDPHVAAPVVKAVAALPEVVLAAVARDNIGSRCLLDPI 1758
            ++ NVL+E+  + AS   D+H  V+ E +   ++  QLR  L +  GY   L  NRYSSHVLQ +L+ VG +V+ E             ++G         + +D V  M  +++S+ +E++  W  L++D+S SH  R  L  L G   ++E+RGK+ +H      A+                            +++ ++ +++ +P +FE  + ++  +I++ P  +L  L   T   P+  M +RV                  ++   ++V ++L+W  E++S +  +  +G+  ASHFLEA+   S    +  ++ RC ++RLLEF EH V+NF++Q  +Q V ++ +AE ++  +      LL + R GV+WR A+   R  L  +   N               VVA   +       E+K+               P  + +  VPALL  ++           D+L LNV  AR+V+  L +   ++AP+V++V  +  + L A+A+D+ GSRC+++PI
Sbjct:   48 LVWNVLEEIAPRAASAASDRHACVLIEVLVDHMSAQQLRFFLHKMEGYFSHLWTNRYSSHVLQRVLAKVGPIVQRE-------------EDGEADDADDPDRAQD-VPAMSTLLVSMCSEVQNEWISLINDVSASHVMRAVLCALAGRAPVAEKRGKKGKHK-----AV--------------------------NFYDQNASDVRYSIPSTFEATMGEMLEQILSSPDGKLVELMSDTHAGPVLSMAVRVAP----------------QTMQAEIVYKLLKWTDEERSKKRFYDYAGDAVASHFLEAICDASDDEMWAAVFERCLQTRLLEFAEHNVANFVVQRFIQSVPNAELAEVVLEELQGALWSLLSSHRPGVVWRLAECSERFKLRQKSFFN--------------AVVAAVEK------QESKK---------------PEAARKSTVPALLGLQLSTTS-------DKLTLNVASARLVETLLKYPAEISAPLVQSVVEMNALQLVALAKDSTGSRCIVEPI 474          
BLAST of mRNA_H-elongata_contig8279.15918.1 vs. uniprot
Match: A0A8K1CBA7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBA7_PYTOL)

HSP 1 Score: 189 bits (479), Expect = 1.270e-46
Identity = 139/444 (31.31%), Postives = 207/444 (46.62%), Query Frame = 1
Query:   13 PRRAAKETLSYLSQVEPVIDDFAEDDHSSTYGYSSKGGGGEDEDESDIGREQMLENVLDELEHQTASIMEDKHGSVVAEKIARRLTPLQLRIMLSRCRGYMLSLANNRYSSHVLQTLLSLVGQVVEAEISSPDLVTTISDTKNGNNHSERSMYKGKDQVDLMQDIVLSLVAELKGTWAELMDDISGSHTGRGFLQVLGGLPILSERRGKQSRHAHSVGTAIGTGKFGSIPGSGQIGSQGSPLAKVDPEAFERWSTPIKHRVPPSFEVALTDVTTEIVALPARELQTLACSTSGCPLFVMLLRVYANLAIEPASGRLPSLEQESTAMDLVTQILQWEHEDQSAEVVFAMSGERTASHFLEAVLWLSPLAFFQGLYRRCFESRLLEFCEHGVSNFLIQAALQRVEDSAMAEAIVGAIGDLASDLLKARRAGVLWRAAQACVRLSLN 1344
            PRR   +TLSYL +V            S T   SS     ED  E D+  + ML NVLDE+  + AS   D+H   + E    R++  QLR  LS+  GY   L  NRYSSHVLQ +LS    +VE E++                 S+ S  +  +   LM ++++++V+E++  W  LM+D+S SH  R  L VL G P++ E+RGK+ +H   V    G    GS P                   FE         VP +FE               +E+  L    +  PL   +L+                L  E T   L   IL+WE E +SA+V +  +G+   SHF+E+   ++   FF  ++RRC + ++LEF EH ++N++IQ A+QRV  S +A  ++  +G     LL   RAGV+WR  + C R  ++
Sbjct:   21 PRRLEPDTLSYLKEV------------SETLATSS-----EDLGEEDV--QMMLWNVLDEMAPRAASASSDRHAGELIETFLPRMSDGQLRFFLSKMEGYFSHLWTNRYSSHVLQHILSRSNVIVEKEVTG---------------ESDDSEDERLEGTPLMSEVIVNMVSEVENEWLTLMNDVSASHVLRSVLAVLVGRPLVPEKRGKKGKHRTIV---FGEQSDGSTP------------------TFE---------VPATFEALYQQFVRRFRGAHKQEMMNLMYDRNSGPLIAAMLK----------------LSPEKTQTTLAEHILEWEDESRSAQVFYDFAGDAVTSHFIESFFSVAKDDFFAAVFRRCVQGKMLEFAEHSIANYVIQNAIQRVNTSDLALEVLEELGGSLWTLLSMGRAGVVWRLVEMCRRAKVH 384          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8279.15918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L823_9PHAE3.320e-29461.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQM4_ECTSI2.040e-26263.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YK18_9STRA6.080e-8729.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U019_9STRA2.430e-7931.90Armadillo-like helical n=3 Tax=Monodopsidaceae Tax... [more]
A0A1V9YHD7_9STRA7.500e-6827.75Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1W0A080_9STRA1.620e-6727.79Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A067C117_SAPPC2.200e-6428.20Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485L964_9STRA3.150e-5927.85Aste57867_18085 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0WJG9_9STRA3.790e-4726.60Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8K1CBA7_PYTOL1.270e-4631.31Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8279contigH-elongata_contig8279:6242..10020 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score716.8
Seed ortholog evalue1.3e-203
Seed eggNOG ortholog2880.D8LQM4
EggNOG OGs2CYFW@1,2S43M@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionArmadillo-like helical
Ec32 orthologEc-10_006220.1
Exons3
Model size3048
Cds size2865
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8279.15918.1prot_H-elongata_contig8279.15918.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig8279 6410..10005 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931234.222403-UTR-H-elongata_contig8279:6241..64091622931234.222403-UTR-H-elongata_contig8279:6241..6409Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8279 6242..6409 +
1691679753.1478198-UTR-H-elongata_contig8279:6241..64091691679753.1478198-UTR-H-elongata_contig8279:6241..6409Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8279 6242..6409 +
1622931234.3128536-UTR-H-elongata_contig8279:10005..100201622931234.3128536-UTR-H-elongata_contig8279:10005..10020Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8279 10006..10020 +
1691679753.1892169-UTR-H-elongata_contig8279:10005..100201691679753.1892169-UTR-H-elongata_contig8279:10005..10020Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8279 10006..10020 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931234.2366729-CDS-H-elongata_contig8279:6409..73951622931234.2366729-CDS-H-elongata_contig8279:6409..7395Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8279 6410..7395 +
1691679753.1587813-CDS-H-elongata_contig8279:6409..73951691679753.1587813-CDS-H-elongata_contig8279:6409..7395Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8279 6410..7395 +
1622931234.2836766-CDS-H-elongata_contig8279:7724..85281622931234.2836766-CDS-H-elongata_contig8279:7724..8528Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8279 7725..8528 +
1691679753.1725872-CDS-H-elongata_contig8279:7724..85281691679753.1725872-CDS-H-elongata_contig8279:7724..8528Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8279 7725..8528 +
1622931234.296752-CDS-H-elongata_contig8279:8930..100051622931234.296752-CDS-H-elongata_contig8279:8930..10005Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8279 8931..10005 +
1691679753.181724-CDS-H-elongata_contig8279:8930..100051691679753.181724-CDS-H-elongata_contig8279:8930..10005Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8279 8931..10005 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig8279.15918.1

>prot_H-elongata_contig8279.15918.1 ID=prot_H-elongata_contig8279.15918.1|Name=mRNA_H-elongata_contig8279.15918.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=955bp
MLENVLDELEHQTASIMEDKHGSVVAEKIARRLTPLQLRIMLSRCRGYML
SLANNRYSSHVLQTLLSLVGQVVEAEISSPDLVTTISDTKNGNNHSERSM
YKGKDQVDLMQDIVLSLVAELKGTWAELMDDISGSHTGRGFLQVLGGLPI
LSERRGKQSRHAHSVGTAIGTGKFGSIPGSGQIGSQGSPLAKVDPEAFER
WSTPIKHRVPPSFEVALTDVTTEIVALPARELQTLACSTSGCPLFVMLLR
VYANLAIEPASGRLPSLEQESTAMDLVTQILQWEHEDQSAEVVFAMSGER
TASHFLEAVLWLSPLAFFQGLYRRCFESRLLEFCEHGVSNFLIQAALQRV
EDSAMAEAIVGAIGDLASDLLKARRAGVLWRAAQACVRLSLNPRIQTNLL
QNLAGAVCAGHTGVVAPPSRVGDGVHTEAKRTASENYTKASSASNDPFKS
AREWVPALLSPRVPEKESGGGKGLDRLFLNVPGARIVQNALLFDPHVAAP
VVKAVAALPEVVLAAVARDNIGSRCLLDPILDEAAGGETVVGSVHGDKGK
GRNKPAEDARRTILRSFRGHLVAMACDRVGWHVLLKCFRGVDMKEKRAIV
EELASGGEHAWLRMSGYPSGRSVLTECMVERFSRSPREWEDAFKSKENRA
KILDDILAIGSSTKASRDDKTRGKGEQDEGKRDGNTRASEFPSPSPQERC
DSGGGVDNEDGGDGAVGKGKRRRQRGRGKRGRSSAGEASDKGDDLKREDA
SKTAIDSENADSSVRVPPMVSRGKRKGASAVSAGKNDEAANVARGDSTPK
REGVKKDAAGARKQSSLLKKARKLHESVGEDAPAAIEAEVISGSVREQST
RTGKNKKAKKMKAREKDLLTVANEDKRQVNVTSIDPGERRKKSPAEEGGK
TGNGFQEKMKKKKRYAHNEEADEVVVKVSAAKEAPVRIGKRKKKASRKGG
GRLC*
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mRNA from alignment at H-elongata_contig8279:6242..10020+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig8279.15918.1 ID=mRNA_H-elongata_contig8279.15918.1|Name=mRNA_H-elongata_contig8279.15918.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3779bp|location=Sequence derived from alignment at H-elongata_contig8279:6242..10020+ (Himanthalia elongata Himel1 dioecious)
GATTGGAATCACCCGAGAAGGGCAGCTAAGGAGACACTTTCGTATTTATC TCAGGTCGAGCCAGTAATTGATGATTTCGCGGAAGATGATCACTCCAGCA CCTACGGGTATAGCTCGAAGGGTGGAGGCGGCGAGGATGAAGATGAAAGC GATATAGGGCGAGAGCAGATGCTGGAGAATGTGCTTGACGAGCTCGAGCA CCAGACGGCCAGCATTATGGAGGATAAACATGGAAGTGTGGTGGCTGAGA AGATAGCTCGCCGCCTCACGCCGTTGCAGCTTAGAATTATGCTCAGCCGT TGTCGTGGGTACATGCTCAGCCTGGCTAATAATCGGTATTCGTCTCATGT GCTCCAAACCCTCCTCAGCCTTGTCGGGCAAGTAGTCGAAGCGGAGATCT CCTCCCCAGACCTTGTAACCACCATCAGTGATACGAAAAACGGCAATAAT CACTCGGAGCGATCAATGTACAAGGGTAAGGATCAAGTTGATCTCATGCA AGACATCGTGCTCTCTCTGGTGGCCGAGTTGAAGGGCACATGGGCCGAGC TTATGGACGATATTAGCGGCAGTCACACGGGACGGGGTTTCCTTCAGGTT CTTGGCGGGCTTCCAATCCTGAGCGAGAGGCGTGGCAAGCAGTCTCGGCA TGCTCACTCCGTAGGGACCGCAATAGGCACAGGGAAGTTTGGCTCTATTC CTGGTAGCGGACAAATCGGGTCTCAAGGGTCTCCACTCGCAAAGGTCGAT CCCGAGGCGTTCGAGAGGTGGTCGACGCCGATCAAACACCGCGTGCCGCC GTCGTTCGAGGTAGCCTTGACAGACGTAACGACCGAGATTGTTGCTCTCC CCGCGAGAGAGCTTCAGACGCTCGCTTGCAGCACTTCCGGGTGCCCTTTA TTTGTGATGCTTCTCAGGGTCTACGCGAACCTAGCTATAGAACCCGCCTC CGGTAGACTGCCTTCCCTGGAGCAAGAGTCTACGGCGATGGATCTTGTGA CGCAGATCCTTCAGTGGGAACACGAGGACCAGAGCGCGGAAGTGGTGTTT GCCATGTCGGGGGAACGGACGGCAAGTCATTTTTTGGAGGCGGTACTATG GCTTTCACCGTTGGCATTTTTCCAAGGACTGTACCGACGATGCTTCGAGA GCAGGTGAACACGCCACAGTGCCTTGTCGTTGTTGACTTCTGTAGCTGGT GCCAAAATATGTGTACAGAGCGCATTCTGATAGTTGAATATTGTTATTGT GCTTTAATAAAAGGATGTATTCCCCTCGTCTATATCAGTGGAGGCGGGCA TGTTCAGAGTTGGGGTTTATGTGAAGGGCAGTGGACCCACGGAGGCAAGA AGCCTTTTTTTCGTGACCGTTGGACTTGATCTCTCTCTGTTGCCCCCCCC CTACACACACTCCGAAGCGACGGAAGAACTTGATAAGCTTTTCACCTTTC GCGCGTTCTTGCCATTATTTTTGGACCCCGCAGGCTCCTAGAGTTCTGCG AGCATGGGGTGTCAAACTTCTTGATCCAAGCAGCGCTGCAACGCGTTGAG GACAGCGCCATGGCTGAAGCAATCGTGGGAGCGATCGGCGACCTCGCTTC CGACCTCCTCAAAGCCCGTCGAGCGGGTGTGCTCTGGAGGGCTGCGCAGG CGTGCGTCCGCCTCAGCCTGAATCCACGGATCCAAACCAATCTCCTCCAG AACCTTGCTGGTGCGGTGTGCGCTGGGCACACAGGCGTGGTTGCACCGCC GTCCCGAGTCGGTGACGGCGTCCATACAGAAGCAAAGAGAACGGCGAGCG AAAATTATACGAAGGCGTCATCCGCGTCCAATGACCCCTTCAAGTCAGCG CGCGAATGGGTTCCCGCGCTGTTGAGTCCTCGTGTTCCTGAAAAAGAAAG TGGCGGCGGCAAAGGCTTAGATCGGCTGTTTTTGAACGTTCCGGGCGCGC GCATCGTACAGAACGCCTTGTTGTTCGACCCGCATGTGGCTGCTCCGGTG GTAAAAGCGGTGGCGGCCTTGCCGGAAGTCGTACTCGCCGCCGTCGCCCG TGACAACATCGGCAGCCGTTGCCTCCTCGACCCGATACTCGACGAGGCAG CCGGGGGGGAGACTGTGGTGGGGTCAGTGCATGGAGATAAAGGGAAGGGA AGGAACAAGCCTGCGGAGGACGCGAGGAGGACTATTCTGAGGTCGTTCAG GGGGCATCTGGTGGCGATGGCATGCGATCGCGTGGGCTGGCACGTCCTTC TAAAGTGCTTCCGTGGGGTGGACATGAAGGAGAAGAGGTATATCGTGTGG TATGACGGTTTCCATGCTGACTTTGATTCGTTTCGGAAGGTCTAGACGCT TGTTCAACATATTTATGTAATATATATATATATATACCTGTATAGATATG GCTATTTCTCTTTGCAGGGAACAATTTATACAGAAGGTACAAATTCGTCG CAAATGTATGACAGCCAGGGGACGTTGACCTTGACATCTTTGTAGTCGAA ACATTGGCTCACGGGGATTTCTGCTTTGCTTCTTGCCCAACTCGTTCATC TTCCATTGCGGGCACACCGCGACGAGTTTTTGTGGAACAGGTAGCCCGAG CCATTTCACTTGCTTCTCTTGTGATCGCCATATACCGCATCTCTCCTCAC CCCGCTCCCCGCCCCAATGTCTGGTCTTCGGTGCCGCAGAGCGATTGTCG AAGAGCTCGCCAGCGGGGGAGAGCACGCTTGGTTGCGCATGTCCGGCTAC CCTTCGGGAAGAAGCGTTCTGACAGAGTGCATGGTGGAACGCTTCTCGCG ATCGCCCCGAGAATGGGAAGATGCCTTCAAAAGCAAAGAAAACCGCGCCA AGATCCTGGACGACATTCTTGCCATTGGATCTTCGACGAAGGCCAGCAGG GATGACAAAACAAGGGGAAAGGGCGAGCAAGACGAGGGTAAGCGCGATGG CAACACCCGCGCTAGCGAGTTCCCGTCGCCGAGCCCCCAAGAGCGATGCG ATAGTGGCGGTGGTGTTGACAATGAAGATGGTGGTGATGGTGCTGTGGGG AAGGGGAAAAGGAGGCGGCAACGTGGCAGGGGGAAGCGAGGCAGGTCATC GGCGGGTGAAGCAAGCGATAAGGGAGATGACCTAAAGCGCGAGGATGCAT CGAAAACAGCCATCGACAGCGAGAACGCTGATTCTTCTGTCCGGGTGCCG CCGATGGTTTCCCGGGGCAAGAGAAAGGGAGCGTCTGCGGTATCAGCAGG GAAGAATGATGAGGCAGCGAACGTGGCTAGGGGTGATTCTACGCCCAAGC GCGAGGGGGTCAAGAAGGACGCTGCCGGTGCGCGGAAGCAATCCTCTTTG TTGAAGAAGGCGAGGAAGCTTCATGAGAGCGTGGGGGAGGATGCACCTGC TGCGATCGAAGCGGAAGTTATTTCAGGAAGCGTCAGAGAGCAATCGACAA GGACAGGCAAGAACAAGAAGGCAAAAAAGATGAAGGCCCGGGAGAAAGAC CTTCTTACGGTAGCCAATGAAGATAAGCGTCAAGTTAATGTCACCTCAAT TGACCCGGGAGAGCGCCGAAAAAAATCACCGGCAGAAGAAGGAGGCAAGA CAGGCAATGGCTTCCAGGAAAAGATGAAAAAAAAGAAACGATACGCACAT AACGAGGAGGCCGACGAGGTAGTTGTGAAGGTTTCCGCCGCTAAAGAGGC GCCTGTGAGGATCGGAAAGAGAAAAAAAAAAGCTAGCAGGAAAGGAGGGG GCCGTCTGTGTTAAAGGAGAGCTTATGAC
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Coding sequence (CDS) from alignment at H-elongata_contig8279:6242..10020+

>mRNA_H-elongata_contig8279.15918.1 ID=mRNA_H-elongata_contig8279.15918.1|Name=mRNA_H-elongata_contig8279.15918.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5730bp|location=Sequence derived from alignment at H-elongata_contig8279:6242..10020+ (Himanthalia elongata Himel1 dioecious)
ATGCTGGAGAATGTGCTTGACGAGCTCGAGCACCAGACGGCCAGCATTAT
GGAGGATAAACATGGAAGTGTGGTGGCTGAGAAGATAGCTCGCCGCCTCA
CGCCGTTGCAGCTTAGAATTATGCTCAGCCGTTGTCGTGGGTACATGCTC
AGCCTGGCTAATAATCGGTATTCGTCTCATGTGCTCCAAACCCTCCTCAG
CCTTGTCGGGCAAGTAGTCGAAGCGGAGATCTCCTCCCCAGACCTTGTAA
CCACCATCAGTGATACGAAAAACGGCAATAATCACTCGGAGCGATCAATG
TACAAGGGTAAGGATCAAGTTGATCTCATGCAAGACATCGTGCTCTCTCT
GGTGGCCGAGTTGAAGGGCACATGGGCCGAGCTTATGGACGATATTAGCG
GCAGTCACACGGGACGGGGTTTCCTTCAGGTTCTTGGCGGGCTTCCAATC
CTGAGCGAGAGGCGTGGCAAGCAGTCTCGGCATGCTCACTCCGTAGGGAC
CGCAATAGGCACAGGGAAGTTTGGCTCTATTCCTGGTAGCGGACAAATCG
GGTCTCAAGGGTCTCCACTCGCAAAGGTCGATCCCGAGGCGTTCGAGAGG
TGGTCGACGCCGATCAAACACCGCGTGCCGCCGTCGTTCGAGGTAGCCTT
GACAGACGTAACGACCGAGATTGTTGCTCTCCCCGCGAGAGAGCTTCAGA
CGCTCGCTTGCAGCACTTCCGGGTGCCCTTTATTTGTGATGCTTCTCAGG
GTCTACGCGAACCTAGCTATAGAACCCGCCTCCGGTAGACTGCCTTCCCT
GGAGCAAGAGTCTACGGCGATGGATCTTGTGACGCAGATCCTTCAGTGGG
AACACGAGGACCAGAGCGCGGAAGTGGTGTTTGCCATGTCGGGGGAACGG
ACGGCAAGTCATTTTTTGGAGGCGGTACTATGGCTTTCACCGTTGGCATT
TTTCCAAGGACTGTACCGACGATGCTTCGAGAGCAGATGCTGGAGAATGT
GCTTGACGAGCTCGAGCACCAGACGGCCAGCATTATGGAGGATAAACATG
GAAGTGTGGTGGCTGAGAAGATAGCTCGCCGCCTCACGCCGTTGCAGCTT
AGAATTATGCTCAGCCGTTGTCGTGGGTACATGCTCAGCCTGGCTAATAA
TCGGTATTCGTCTCATGTGCTCCAAACCCTCCTCAGCCTTGTCGGGCAAG
TAGTCGAAGCGGAGATCTCCTCCCCAGACCTTGTAACCACCATCAGTGAT
ACGAAAAACGGCAATAATCACTCGGAGCGATCAATGTACAAGGGTAAGGA
TCAAGTTGATCTCATGCAAGACATCGTGCTCTCTCTGGTGGCCGAGTTGA
AGGGCACATGGGCCGAGCTTATGGACGATATTAGCGGCAGTCACACGGGA
CGGGGTTTCCTTCAGGTTCTTGGCGGGCTTCCAATCCTGAGCGAGAGGCG
TGGCAAGCAGTCTCGGCATGCTCACTCCGTAGGGACCGCAATAGGCACAG
GGAAGTTTGGCTCTATTCCTGGTAGCGGACAAATCGGGTCTCAAGGGTCT
CCACTCGCAAAGGTCGATCCCGAGGCGTTCGAGAGGTGGTCGACGCCGAT
CAAACACCGCGTGCCGCCGTCGTTCGAGGTAGCCTTGACAGACGTAACGA
CCGAGATTGTTGCTCTCCCCGCGAGAGAGCTTCAGACGCTCGCTTGCAGC
ACTTCCGGGTGCCCTTTATTTGTGATGCTTCTCAGGGTCTACGCGAACCT
AGCTATAGAACCCGCCTCCGGTAGACTGCCTTCCCTGGAGCAAGAGTCTA
CGGCGATGGATCTTGTGACGCAGATCCTTCAGTGGGAACACGAGGACCAG
AGCGCGGAAGTGGTGTTTGCCATGTCGGGGGAACGGACGGCAAGTCATTT
TTTGGAGGCGGTACTATGGCTTTCACCGTTGGCATTTTTCCAAGGACTGT
ACCGACGATGCTTCGAGAGCAGGCTCCTAGAGTTCTGCGAGCATGGGGTG
TCAAACTTCTTGATCCAAGCAGCGCTGCAACGCGTTGAGGACAGCGCCAT
GGCTGAAGCAATCGTGGGAGCGATCGGCGACCTCGCTTCCGACCTCCTCA
AAGCCCGTCGAGCGGGTGTGCTCTGGAGGGCTGCGCAGGCGTGCGTCCGC
CTCAGCCTGAATCCACGGATCCAAACCAATCTCCTCCAGAACCTTGCTGG
TGCGGTGTGCGCTGGGCACACAGGCGTGGTTGCACCGCCGTCCCGAGTCG
GTGACGGCGTCCATACAGAAGCAAAGAGAACGGCGAGCGAAAATTATACG
AAGGCGTCATCCGCGTCCAATGACCCCTTCAAGTCAGCGCGCGAATGGGT
TCCCGCGCTGTTGAGTCCTCGTGTTCCTGAAAAAGAAAGTGGCGGCGGCA
AAGGCTTAGATCGGCTGTTTTTGAACGTTCCGGGCGCGCGCATCGTACAG
AACGCCTTGTTGTTCGACCCGCATGTGGCTGCTCCGGTGGTAAAAGCGGT
GGCGGCCTTGCCGGAAGTCGTACTCGCCGCCGTCGCCCGTGACAACATCG
GCAGCCGTTGCCTCCTCGACCCGATACTCGACGAGGCAGCCGGGGGGGAG
ACTGTGGTGGGGTCAGTGCATGGAGATAAAGGGAAGGGAAGGAACAAGCC
TGCGGAGGACGCGAGGAGGACTATTCTGAGGTCGTTCAGGGGGCATCTGG
TGGCGATGGCATGCGATCGCGTGGGCTGGCACGTCCTTCTAAAGTGCTTC
CGTGGGGTGGACATGAAGGAGAAGAGGCTCCTAGAGTTCTGCGAGCATGG
GGTGTCAAACTTCTTGATCCAAGCAGCGCTGCAACGCGTTGAGGACAGCG
CCATGGCTGAAGCAATCGTGGGAGCGATCGGCGACCTCGCTTCCGACCTC
CTCAAAGCCCGTCGAGCGGGTGTGCTCTGGAGGGCTGCGCAGGCGTGCGT
CCGCCTCAGCCTGAATCCACGGATCCAAACCAATCTCCTCCAGAACCTTG
CTGGTGCGGTGTGCGCTGGGCACACAGGCGTGGTTGCACCGCCGTCCCGA
GTCGGTGACGGCGTCCATACAGAAGCAAAGAGAACGGCGAGCGAAAATTA
TACGAAGGCGTCATCCGCGTCCAATGACCCCTTCAAGTCAGCGCGCGAAT
GGGTTCCCGCGCTGTTGAGTCCTCGTGTTCCTGAAAAAGAAAGTGGCGGC
GGCAAAGGCTTAGATCGGCTGTTTTTGAACGTTCCGGGCGCGCGCATCGT
ACAGAACGCCTTGTTGTTCGACCCGCATGTGGCTGCTCCGGTGGTAAAAG
CGGTGGCGGCCTTGCCGGAAGTCGTACTCGCCGCCGTCGCCCGTGACAAC
ATCGGCAGCCGTTGCCTCCTCGACCCGATACTCGACGAGGCAGCCGGGGG
GGAGACTGTGGTGGGGTCAGTGCATGGAGATAAAGGGAAGGGAAGGAACA
AGCCTGCGGAGGACGCGAGGAGGACTATTCTGAGGTCGTTCAGGGGGCAT
CTGGTGGCGATGGCATGCGATCGCGTGGGCTGGCACGTCCTTCTAAAGTG
CTTCCGTGGGGTGGACATGAAGGAGAAGAGAGCGATTGTCGAAGAGCTCG
CCAGCGGGGGAGAGCACGCTTGGTTGCGCATGTCCGGCTACCCTTCGGGA
AGAAGCGTTCTGACAGAGTGCATGGTGGAACGCTTCTCGCGATCGCCCCG
AGAATGGGAAGATGCCTTCAAAAGCAAAGAAAACCGCGCCAAGATCCTGG
ACGACATTCTTGCCATTGGATCTTCGACGAAGGCCAGCAGGGATGACAAA
ACAAGGGGAAAGGGCGAGCAAGACGAGGGTAAGCGCGATGGCAACACCCG
CGCTAGCGAGTTCCCGTCGCCGAGCCCCCAAGAGCGATGCGATAGTGGCG
GTGGTGTTGACAATGAAGATGGTGGTGATGGTGCTGTGGGGAAGGGGAAA
AGGAGGCGGCAACGTGGCAGGGGGAAGCGAGGCAGGTCATCGGCGGGTGA
AGCAAGCGATAAGGGAGATGACCTAAAGCGCGAGGATGCATCGAAAACAG
CCATCGACAGCGAGAACGCTGATTCTTCTGTCCGGGTGCCGCCGATGGTT
TCCCGGGGCAAGAGAAAGGGAGCGTCTGCGGTATCAGCAGGGAAGAATGA
TGAGGCAGCGAACGTGGCTAGGGGTGATTCTACGCCCAAGCGCGAGGGGG
TCAAGAAGGACGCTGCCGGTGCGCGGAAGCAATCCTCTTTGTTGAAGAAG
GCGAGGAAGCTTCATGAGAGCGTGGGGGAGGATGCACCTGCTGCGATCGA
AGCGGAAGTTATTTCAGGAAGCGTCAGAGAGCAATCGACAAGGACAGGCA
AGAACAAGAAGGCAAAAAAGATGAAGGCCCGGGAGAAAGACCTTCTTACG
GTAGCCAATGAAGATAAGCGTCAAGTTAATGTCACCTCAATTGACCCGGG
AGAGCGCCGAAAAAAATCACCGGCAGAAGAAGGAGGCAAGACAGGCAATG
GCTTCCAGGAAAAGATGAAAAAAAAGAAACGATACGCACATAACGAGGAG
GCCGACGAGGTAGTTGTGAAGGTTTCCGCCGCTAAAGAGGCGCCTGTGAG
GATCGGAAAGAGAAAAAAAAAAGCTAGCAGGAAAGGAGGGGGCCGTCTGT
GTTAAAGCGATTGTCGAAGAGCTCGCCAGCGGGGGAGAGCACGCTTGGTT
GCGCATGTCCGGCTACCCTTCGGGAAGAAGCGTTCTGACAGAGTGCATGG
TGGAACGCTTCTCGCGATCGCCCCGAGAATGGGAAGATGCCTTCAAAAGC
AAAGAAAACCGCGCCAAGATCCTGGACGACATTCTTGCCATTGGATCTTC
GACGAAGGCCAGCAGGGATGACAAAACAAGGGGAAAGGGCGAGCAAGACG
AGGGTAAGCGCGATGGCAACACCCGCGCTAGCGAGTTCCCGTCGCCGAGC
CCCCAAGAGCGATGCGATAGTGGCGGTGGTGTTGACAATGAAGATGGTGG
TGATGGTGCTGTGGGGAAGGGGAAAAGGAGGCGGCAACGTGGCAGGGGGA
AGCGAGGCAGGTCATCGGCGGGTGAAGCAAGCGATAAGGGAGATGACCTA
AAGCGCGAGGATGCATCGAAAACAGCCATCGACAGCGAGAACGCTGATTC
TTCTGTCCGGGTGCCGCCGATGGTTTCCCGGGGCAAGAGAAAGGGAGCGT
CTGCGGTATCAGCAGGGAAGAATGATGAGGCAGCGAACGTGGCTAGGGGT
GATTCTACGCCCAAGCGCGAGGGGGTCAAGAAGGACGCTGCCGGTGCGCG
GAAGCAATCCTCTTTGTTGAAGAAGGCGAGGAAGCTTCATGAGAGCGTGG
GGGAGGATGCACCTGCTGCGATCGAAGCGGAAGTTATTTCAGGAAGCGTC
AGAGAGCAATCGACAAGGACAGGCAAGAACAAGAAGGCAAAAAAGATGAA
GGCCCGGGAGAAAGACCTTCTTACGGTAGCCAATGAAGATAAGCGTCAAG
TTAATGTCACCTCAATTGACCCGGGAGAGCGCCGAAAAAAATCACCGGCA
GAAGAAGGAGGCAAGACAGGCAATGGCTTCCAGGAAAAGATGAAAAAAAA
GAAACGATACGCACATAACGAGGAGGCCGACGAGGTAGTTGTGAAGGTTT
CCGCCGCTAAAGAGGCGCCTGTGAGGATCGGAAAGAGAAAAAAAAAAGCT
AGCAGGAAAGGAGGGGGCCGTCTGTGTTAA
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