mRNA_H-elongata_contig8276.15916.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8276.15916.1 vs. uniprot
Match: D8LHY4_ECTSI (Geranyl-diphosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHY4_ECTSI) HSP 1 Score: 568 bits (1464), Expect = 3.410e-197 Identity = 298/363 (82.09%), Postives = 327/363 (90.08%), Query Frame = 2
Query: 2 NSPTVDVQDFVYDIDFLQRPKRNGVPLANAPDPFELVAGDLSGLSDGIKSLIGTDHPVLNAAAKYFFELDGGKKIRPTMVILMSYACNSHARQLGREISAPDTKTHEALQVRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLKSVELMSAAIEHLVKGEVLQMRPTADVGGAFEYYVKKNYYKTGSLMANSCKAAAVLGNHEPEVQGVAFEYGKRVGLAFQLVDDILDFEGNSLTLGKPALSDLRQGLATAPVLLAAEQQSGLLKLIKRKFKGPGDVDEALALVNESDGIARAKEVAAVQAEKAMDAVFTLEESPERDALVQLAYKIVNRNH 1090
++PTV+VQDFVYDIDF QRP LA+ PDPFELV+ +L+GLSDGIKSLIGT+H VLNAAAKYFFELDGGKKIRPTMVILMS ACNS+++Q+ ++ P T+ LQ+RLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSL+SVELMSAAIEHLVKGEVLQMRPT D GGAFEYYV+KNYYKTGSLMANSCKA+AVLG H+ EVQ VAFEYGKRVGLAFQLVDDILDFEGN+ TLGKPAL+DLRQGLATAPVLLAAEQQ GL KLI RKF+GPGDVDEAL LV+ SDGIARAKEVA VQAEKAM A+ TL +SP ++ALVQLA+KIVNRNH
Sbjct: 152 DTPTVEVQDFVYDIDFAQRPSGASQSLADGPDPFELVSAELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTMVILMSQACNSNSQQVRPDVQ-PGTELVNPLQLRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLESVELMSAAIEHLVKGEVLQMRPTEDGGGAFEYYVRKNYYKTGSLMANSCKASAVLGQHDLEVQEVAFEYGKRVGLAFQLVDDILDFEGNTFTLGKPALNDLRQGLATAPVLLAAEQQPGLAKLISRKFRGPGDVDEALELVHRSDGIARAKEVAVVQAEKAMSAILTLHDSPAQNALVQLAHKIVNRNH 513
BLAST of mRNA_H-elongata_contig8276.15916.1 vs. uniprot
Match: A0A836CLR5_9STRA (Geranyl-diphosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR5_9STRA) HSP 1 Score: 418 bits (1075), Expect = 2.340e-139 Identity = 230/357 (64.43%), Postives = 269/357 (75.35%), Query Frame = 2
Query: 26 DFVYDIDFLQRP--KRNGVPLANAPDPFELVAGDLSGLSDGIKSLIGTDHPVLNAAAKYFFELDGGKKIRPTMVILMSYACNSHARQLGREISAPDTKTHEALQVRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLKSVELMSAAIEHLVKGEVLQMRPTADVGG--AFEYYVKKNYYKTGSLMANSCKAAAVLGNHEPEVQGVAFEYGKRVGLAFQLVDDILDFEGNSLTLGKPALSDLRQGLATAPVLLAAEQQSGLLKLIKRKFKGPGDVDEALALVNESDGIARAKEVAAVQAEKAMDAVFTLEESPERDALVQLAYKIVNR 1084
DFVYDID ++P K A PDPF LVA D+ LSDG K L+GTDHPVL +AA+YFF++DGGKK+RP MV+LMS ACN+ + P A Q RLAEITEMIH ASLFHDDVID+ADTRRG PS N+ FGNKLAILAGDFLLAR+S+SL+RLRS+++VEL+S IEHLVKGEVLQMRP D G AFEYYV K YYKTGSLMANSC+AAA+LG VQ A EYGKRVGLAFQL+DD+LDFEG+ +LGKPAL+DL++GLATAPVLLAAE+ LL ++ RKF GD A LV SDGIARA+++A VQAE AMDA L S ERDALV LA ++V+R
Sbjct: 92 DFVYDIDLERQPSGKFAAALEARLPDPFRLVASDMKTLSDGCKELLGTDHPVLQSAAQYFFDVDGGKKVRPVMVLLMSRACNASC-------APPPAPFALACQRRLAEITEMIHTASLFHDDVIDKADTRRGAPSANRAFGNKLAILAGDFLLARASVSLSRLRSVETVELLSTVIEHLVKGEVLQMRPHVDGAGTRAFEYYVHKTYYKTGSLMANSCQAAALLGGSPAAVQRDAHEYGKRVGLAFQLIDDVLDFEGSDASLGKPALNDLKEGLATAPVLLAAEEHPALLDMVARKFGRDGDAAAAHELVLRSDGIARARDLAIVQAELAMDAATRLAPSEERDALVALAARVVDR 441
BLAST of mRNA_H-elongata_contig8276.15916.1 vs. uniprot
Match: A0A7S2B533_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B533_9STRA) HSP 1 Score: 402 bits (1034), Expect = 2.590e-133 Identity = 234/386 (60.62%), Postives = 276/386 (71.50%), Query Frame = 2
Query: 2 NSPTVDVQD------FVYDIDFLQRPKRNGVPLA-------NAPDPFELVAGDLSGLSDGIKSLIGTDHPVLNAAAKYFFELDGGKKIRPTMVILMSYACNSHARQLGREISAPD-TKTHEALQVRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLKSVELMSAAIEHLVKGEVLQMRP--TADVGGAFEYYVKKNYYKTGSLMANSCKAAAVLGNHEPEVQGV-------AFEYGKRVGLAFQLVDDILDFEGNSLTLGKPALSDLRQGLATAPVLLAAEQQSGLLKLIKRKFKGPGDVDEALALVNESDGIARAKEVAAVQAEKAMDAVFTLEESPERDALVQLAYKIVNRNH 1090
++PTV V D F + +D Q P + A +APDPF+LVAG++ LSDGI+SL+G+DHPVL A+YFFELDGGKKIRPTMV+LMS+A + A SA D T Q RLAEITEMIH ASLFHDDVID+ADTRRGVPSVN+ FGNKLAIL GDFLLAR+SMSLARLR+++ VEL+S IEHLVKGEV+QMR DV A EYY KNYYKTGSLMANSCKAAA+L H+ V AF YGK VGLAFQL+DD+LD EG+ +LGKPAL+DL GLATAPVLLAAE+ L LI+RKFK PGDVDE L LV S G+ RAK++A QA+ A++A+ +E S RDAL LAYK+V RNH
Sbjct: 56 DTPTVLVADPLHPGGFDFSVDLHQPPATDAGVAAFARDRASSAPDPFDLVAGEIDSLSDGIRSLLGSDHPVLEVCARYFFELDGGKKIRPTMVLLMSHAVAASA-------SAGDVTPGVLPSQRRLAEITEMIHTASLFHDDVIDKADTRRGVPSVNRAFGNKLAILGGDFLLARASMSLARLRNVEVVELLSTVIEHLVKGEVMQMRGGHLKDVT-ALEYYFHKNYYKTGSLMANSCKAAAILSAHDNTDPAVIAAQAEAAFSYGKHVGLAFQLIDDVLDMEGSVQSLGKPALADLGAGLATAPVLLAAEEFPRLQVLIERKFKEPGDVDETLRLVERSQGMTRAKDLATAQADMALEAILIMEPSSARDALAHLAYKVVTRNH 433
BLAST of mRNA_H-elongata_contig8276.15916.1 vs. uniprot
Match: A0A7S1U4D1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4D1_9STRA) HSP 1 Score: 381 bits (978), Expect = 8.450e-125 Identity = 215/383 (56.14%), Postives = 269/383 (70.23%), Query Frame = 2
Query: 2 NSPTVDVQDFVYDIDFLQRPKRNGVPLANAP-----DPFELVAGDLSGLSDGIKSLIGTDHPVLNAAAKYFFELDGGKKIRPTMVILMSYACNSHARQLGREISAPDTKTHEALQVRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLKSVELMSAAIEHLVKGEVLQMRPTADVGGA-----------------FEYYVKKNYYKTGSLMANSCKAAAVLGNHEPEVQGVAFEYGKRVGLAFQLVDDILDFEGNSLTLGKPALSDLRQGLATAPVLLAAEQQSGLLKLIKRKFKGPGDVDEALALVNESDGIARAKEVAAVQAEKAMDAVFTLEESPERDALVQLAYKIVNR 1084
+ PTV+ D ++ R + NG+ A A DPF LV+G ++ L DGIK L+G+DHPVL A A+YFFELDGGKKIRPTMV+L++ AC + Q RLAEITEMIH ASLFHDDVID+ADTRRG PSVN+VFGNK+AILAGDFLLAR+S+SLARLR+L++VEL+S IEHLVKGEV+QMRP +G E+Y++KNYYKT SLMANSC+A A+LG ++ Q A++YGK VGLAFQLVDDILDFEG++ TLGKPAL+DL QG ATAPVLLAAE+ L +LI RKF+ GDV A LV +SDG+ RAK++A QAE A++A L ++ RDAL++LA +V+R
Sbjct: 70 DKPTVEGTDGGIELKSSLRREPNGLLTATAAATRDADPFALVSGHITSLGDGIKHLLGSDHPVLQACAQYFFELDGGKKIRPTMVLLVAAACGGI----------------DDRQRRLAEITEMIHTASLFHDDVIDKADTRRGEPSVNRVFGNKMAILAGDFLLARASISLARLRNLEAVELLSTVIEHLVKGEVMQMRPPPSLGNGDGRGASDGPEWSVSLSPLEFYMRKNYYKTASLMANSCRACALLGGNDEVAQRAAYDYGKHVGLAFQLVDDILDFEGSAETLGKPALADLAQGHATAPVLLAAEEHPELEQLILRKFEEVGDVARAERLVRDSDGLRRAKDLAVAQAEVAIEAAQLLPQTQHRDALMRLACMVVDR 436
BLAST of mRNA_H-elongata_contig8276.15916.1 vs. uniprot
Match: A0A7S2SRE0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRE0_9STRA) HSP 1 Score: 372 bits (954), Expect = 4.350e-122 Identity = 207/338 (61.24%), Postives = 249/338 (73.67%), Query Frame = 2
Query: 92 PDPFELVAGDLSGLSDGIKSLIGTDHPVLNAAAKYFFEL-DGGKKIRPTMVILMSYACNSHARQLGREISAPDTKTHEAL---QVRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLKSVELMSAAIEHLVKGEVLQMRP--TADVGGAFEYYVKKNYYKTGSLMANSCKAAAVLGNHEPEVQGVAFEYGKRVGLAFQLVDDILDFEGNSLTLGKPALSDLRQGLATAPVLLAAEQQSGLLKLIKRKFKGPGDVDEALALVNESDGIARAKEVAAVQAEKAMDAVFTLEESPERDALVQLAYKIVNRN 1087
PDPF LV +++ LS GI+ L+G+DHPVL A++FF+ DGGKKIRPTMV+L++ A N P + HE L Q RLAEITEMIH ASLFHDDVID+ADTRRGV SVNK +GNKLAILAGDFLLAR+S++LARLR+++ VEL+S+ IEHLVKGEV+QMR DV A EYY KNYYKTGSLMANSCKAA VLG Q +AF YGK +GLAFQLVDD+LDFEG +LGKPAL+DLR GL TAPVLLA E+ L LI RKF PGDV++ALA V SDG+ R K++A QA+ AMD++ L S R+AL LA+K+V R+
Sbjct: 50 PDPFALVQDEITTLSSGIRQLLGSDHPVLELCARHFFDWGDGGKKIRPTMVLLLALATN------------PPSHEHEGLLASQRRLAEITEMIHTASLFHDDVIDKADTRRGVESVNKAYGNKLAILAGDFLLARASVALARLRNVEVVELISSIIEHLVKGEVMQMRGGHLQDVS-ALEYYFHKNYYKTGSLMANSCKAAVVLGGGSAVDQDIAFAYGKHIGLAFQLVDDVLDFEGTVESLGKPALADLRAGLVTAPVLLAVEKHPELQSLIDRKFSEPGDVEKALACVEASDGLERTKDLAVAQADLAMDSIMQLPPSEAREALAHLAFKVVARS 374
BLAST of mRNA_H-elongata_contig8276.15916.1 vs. uniprot
Match: A0A3M6VHD5_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHD5_9STRA) HSP 1 Score: 374 bits (959), Expect = 5.570e-122 Identity = 202/337 (59.94%), Postives = 254/337 (75.37%), Query Frame = 2
Query: 95 DPFELVAGDLSGLSDGIKSLIGTDHPVLNAAAKYFFELDGGKKIRPTMVILMSYACNSHARQLGREISAPDTKTHE---ALQVRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLKSVELMSAAIEHLVKGEVLQMRPTADVGG---AFEYYVKKNYYKTGSLMANSCKAAAVLGNHEPEVQGVAFEYGKRVGLAFQLVDDILDFEGNSLTLGKPALSDLRQGLATAPVLLAAEQQSGLLKLIKRKFKGPGDVDEALALVNESDGIARAKEVAAVQAEKAMDAVFTLEESPERDALVQLAYKIVNRN 1087
DPF LV D+ ++D IK ++G+DHPVL A A+YFFE DGGKK+RPTMV+LM+ A +H R +G + PDT++ E A Q RLAEITEMIH ASL HDDVIDEADTRRG PSVNK+FG K+A+LAGDFLLARSS+SLARLR+L+++ELMS IEHLV+GEV+QM+ AD G FEYY++KNYYKTGSLM+NSCKAA LG HE + + F +G+ +GLAFQL+DD+LD+EG + GKP L+DLR GL+TAP+LLA E+ L +L KR F GD++ A LV +S GIAR+K +A QAE A AV L SPERDA+V+LA +V R+
Sbjct: 103 DPFTLVEQDMMSVTDSIKRILGSDHPVLTAVARYFFEHDGGKKVRPTMVLLMARAAEAHRRAIGTPL--PDTQSEEYTHAAQQRLAEITEMIHTASLMHDDVIDEADTRRGRPSVNKIFGAKMAVLAGDFLLARSSVSLARLRNLEAIELMSTTIEHLVRGEVMQMK-NADAHGDISPFEYYLRKNYYKTGSLMSNSCKAALALGKHENHICELGFAFGRHIGLAFQLIDDVLDYEG--VNTGKPLLADLRSGLSTAPLLLAQEEFPVLRELSKRNFAKDGDIEMASELVEKSTGIARSKALAIDQAELAAQAVMQLAPSPERDAMVRLAQLVVFRS 434
BLAST of mRNA_H-elongata_contig8276.15916.1 vs. uniprot
Match: A0A2D4C6A7_PYTIN (Solanesyl diphosphate synthase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6A7_PYTIN) HSP 1 Score: 372 bits (956), Expect = 1.970e-121 Identity = 204/336 (60.71%), Postives = 251/336 (74.70%), Query Frame = 2
Query: 92 PDPFELVAGDLSGLSDGIKSLIGTDHPVLNAAAKYFFELDGGKKIRPTMVILMSYACNSHARQLGREISAPDTKTHE---ALQVRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLKSVELMSAAIEHLVKGEVLQMRPTADVG-GAFEYYVKKNYYKTGSLMANSCKAAAVLGNHEPEVQGVAFEYGKRVGLAFQLVDDILDFEGNSLTLGKPALSDLRQGLATAPVLLAAEQQSGLLKLIKRKFKGPGDVDEALALVNESDGIARAKEVAAVQAEKAMDAVFTLEESPERDALVQLAYKIVNRN 1087
PDPF LVA D+ ++ IK ++G+DHPVL+A A+YFFE DGGKK+RPTMV+L+S A +H R LG + P T++ + A Q RLAEITEMIH ASL HDDVIDEADTRRGVPSVNKVFG KL+ILAG FLLARSS+ LARLRSL+++ELMS AIEHLVKGEV+QM+ FEYY++KNYYKTGSLMANSC+AA LG H+ V + F YG+ +GLAFQLVDD+LD+EG GKP L+DL+ GLATAP+LLA ++ L +L RKF GD++ A LV +S GIAR+K +A QAE A AV L SP RDALV+LA +V+R+
Sbjct: 110 PDPFSLVAEDMVSITSSIKHILGSDHPVLSAVARYFFEHDGGKKVRPTMVLLVSXAAEAHRRALG--LPVPTTQSEDFTVAAQQRLAEITEMIHTASLLHDDVIDEADTRRGVPSVNKVFGXKLSILAGXFLLARSSICLARLRSLEAIELMSTAIEHLVKGEVMQMKHADSQSISPFEYYLRKNYYKTGSLMANSCRAALELGKHDEIVCDLGFAYGRHIGLAFQLVDDVLDYEGTQS--GKPLLADLKSGLATAPLLLAQQEFPVLKELAARKFSKAGDIELASELVEKSTGIARSKALAIGQAELACQAVMQLAPSPARDALVRLAQLVVDRS 441
BLAST of mRNA_H-elongata_contig8276.15916.1 vs. uniprot
Match: A0A7S2RZQ9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RZQ9_9STRA) HSP 1 Score: 371 bits (952), Expect = 7.650e-121 Identity = 198/330 (60.00%), Postives = 245/330 (74.24%), Query Frame = 2
Query: 95 DPFELVAGDLSGLSDGIKSLIGTDHPVLNAAAKYFFELDGGKKIRPTMVILMSYACNSHARQLGREISAPDTKTHEALQVRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLKSVELMSAAIEHLVKGEVLQMRPTADVGGAFEYYVKKNYYKTGSLMANSCKAAAVLGNHEPEVQGVAFEYGKRVGLAFQLVDDILDFEGNSLTLGKPALSDLRQGLATAPVLLAAEQQSGLLKLIKRKFKGPGDVDEALALVNESDGIARAKEVAAVQAEKAMDAVFTLEESPERDALVQLAYKIVNR 1084
DPF LV ++ GLS+ IK L+G+DHPVL+ A+YFFE DGGKK+RPT+V+LMS A N+H ++ + A Q+RL EITEMIH ASL HDDVID ADTRRGV SVN++FGNKLAILAGDFLLAR+S+ LARLR+++ VE+MS +IEHLVKGEV+QM+ AFEYY++KNYYKTGSL+ANS A VLG H EVQ +AFEYG+ +G AFQL+DD LDFEG+ +LGKPAL+DL+QGLATAP+L A + L +I+RKF DVD A V S IA+ + +A AEKA+ AV L+ SPERDALV LA K+VNR
Sbjct: 111 DPFNLVQDEVVGLSENIKQLLGSDHPVLSTVARYFFEQDGGKKMRPTLVLLMSRAANAHESPAQENDKEMNSAVY-ASQIRLGEITEMIHTASLLHDDVIDVADTRRGVKSVNQMFGNKLAILAGDFLLARASICLARLRNVEVVEIMSTSIEHLVKGEVMQMKSDIKGPDAFEYYLRKNYYKTGSLIANSILAGTVLGGHSEEVQTIAFEYGEAIGHAFQLIDDALDFEGSIQSLGKPALADLKQGLATAPILFAQDDFPELRPMIERKFSHSEDVDRAATCVLSSGSIAQTRNMAMSYAEKAIRAVLKLKPSPERDALVHLALKVVNR 439
BLAST of mRNA_H-elongata_contig8276.15916.1 vs. uniprot
Match: A0A0P1AGZ3_PLAHL (Geranylgeranyl diphosphate synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AGZ3_PLAHL) HSP 1 Score: 370 bits (949), Expect = 1.170e-120 Identity = 199/334 (59.58%), Postives = 251/334 (75.15%), Query Frame = 2
Query: 95 DPFELVAGDLSGLSDGIKSLIGTDHPVLNAAAKYFFELDGGKKIRPTMVILMSYACNSHARQLGREISAPDTKTHE-ALQVRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLKSVELMSAAIEHLVKGEVLQMR--PTADVGGAFEYYVKKNYYKTGSLMANSCKAAAVLGNHEPEVQGVAFEYGKRVGLAFQLVDDILDFEGNSLTLGKPALSDLRQGLATAPVLLAAEQQSGLLKLIKRKFKGPGDVDEALALVNESDGIARAKEVAAVQAEKAMDAVFTLEESPERDALVQLAYKIVNRN 1087
DPF+LVA D+ ++D IK ++G+DHPVL A A+YFFE DGGKK+RPTMV+L+S A +H R + +K + A Q RLAEITEMIH ASL HDDVID+A+TRRG PSVNKVFG K+A+LAGDFLLARSS+SLARLR+L++VELMS +IEHLVKGEV+QM+ T D FEYY++KNYYKTGSLM+NSCKAA VLG H+ + + F YG+ +GLAFQL+DD+LD+EG + GKP L+DL+ GL+TAP+LLA E+ L +L KRKF GDV A LV +S GIAR++ +A QAE A A SPERDA+V+LA K+V R+
Sbjct: 90 DPFQLVAQDIVNVNDSIKRILGSDHPVLAAVARYFFEHDGGKKVRPTMVLLVSRAAEAHRRITSTPLPEMQSKEYTLAAQQRLAEITEMIHTASLMHDDVIDDAETRRGQPSVNKVFGGKMAVLAGDFLLARSSVSLARLRNLQAVELMSTSIEHLVKGEVMQMKNADTRDDITPFEYYLRKNYYKTGSLMSNSCKAALVLGKHDEHICDLGFAYGRHIGLAFQLIDDVLDYEG--VNTGKPLLADLKSGLSTAPLLLAQEEFPVLRELAKRKFAWEGDVKLASELVEKSTGIARSRAMAIGQAELAAQAAMQFAPSPERDAMVRLAQKVVYRS 421
BLAST of mRNA_H-elongata_contig8276.15916.1 vs. uniprot
Match: A0A4D9DEU4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEU4_9STRA) HSP 1 Score: 371 bits (953), Expect = 1.280e-120 Identity = 210/346 (60.69%), Postives = 255/346 (73.70%), Query Frame = 2
Query: 101 FELVAGDLSGLSDGI---KSLIGTDHPVLNAAAKYFFELDGGKKIRPTMVILMSYACNSHARQLGREISAPDTKTHEA-----LQVRLAEITEMIHAASLFHDDVIDEADTRRGVPSVNKVFGNKLAILAGDFLLARSSMSLARLRSLKSVELMSAAIEHLVKGEVLQMRPTADVGG---------AFEYYVKKNYYKTGSLMANSCKAAAVLGNHEPEVQGVAFEYGKRVGLAFQLVDDILDFEGNSLTLGKPALSDLRQGLATAPVLLAAEQ-QSGLLKLIKRKFKGPGDVDEALALVNESDGIARAKEVAAVQAEKAMDAVFTLEESPERDALVQLAYKIVNR 1084
+L+AG +G + G+ KSL+G+DHPVL A AKYFFELDGGKKIRPTMV+L+S A +HA G S T T E+ Q RLAEITEMIH ASLFHDDVIDEAD RRGVPS+NK++GNK+AILAGDFLLAR+S+SLARLR+++ VEL+S IEHLVKGEV+Q RP A + G A EYY+ KN+YKTGSLMANSC+AA +L +Q AF YG+ VGLAFQLVDD+LDFE S TLGKPAL+DLR GLATAPVLLAA + ++KRKF GDV+ AL LV SDG+ +AK++A VQAE+AM+A T+ SP RD L++LA +VNR
Sbjct: 122 LDLLAG-WAGAARGVDPFKSLLGSDHPVLEACAKYFFELDGGKKIRPTMVLLISRAVAAHAPAQGVNGSRAFTSTSESPTPLPSQKRLAEITEMIHTASLFHDDVIDEADERRGVPSINKIYGNKMAILAGDFLLARASVSLARLRNIEVVELLSTVIEHLVKGEVMQSRPQALLDGSGTGENGQAALEYYLHKNFYKTGSLMANSCRAAVLLAGGGDALQYQAFAYGRHVGLAFQLVDDVLDFEQTSETLGKPALNDLRHGLATAPVLLAARTFPDEVGDMVKRKFASEGDVERALDLVQRSDGLKKAKDLALVQAEQAMEAALTMNPSPARDGLIKLASLVVNR 466 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8276.15916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8276.15916.1 >prot_H-elongata_contig8276.15916.1 ID=prot_H-elongata_contig8276.15916.1|Name=mRNA_H-elongata_contig8276.15916.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp MVILMSYACNSHARQLGREISAPDTKTHEALQVRLAEITEMIHAASLFHDback to top mRNA from alignment at H-elongata_contig8276:1202..7659+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8276.15916.1 ID=mRNA_H-elongata_contig8276.15916.1|Name=mRNA_H-elongata_contig8276.15916.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6458bp|location=Sequence derived from alignment at H-elongata_contig8276:1202..7659+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8276:1202..7659+ >mRNA_H-elongata_contig8276.15916.1 ID=mRNA_H-elongata_contig8276.15916.1|Name=mRNA_H-elongata_contig8276.15916.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1716bp|location=Sequence derived from alignment at H-elongata_contig8276:1202..7659+ (Himanthalia elongata Himel1 dioecious)back to top |