mRNA_H-elongata_contig81809.15849.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig81809.15849.1
Unique NamemRNA_H-elongata_contig81809.15849.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig81809.15849.1 vs. uniprot
Match: A0A6H5K5N1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5N1_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 2.200e-113
Identity = 170/229 (74.24%), Postives = 204/229 (89.08%), Query Frame = 1
Query:    1 LPAWYTDSEVNRVDWLNKILKKIWPTASGATEGMFKTTIQPILDSCRPPKINALGFRKVSLGTIPPKVVGIRTLETKDNKAVMDIDLRWAGNAEFVIEAGVKPVPLLVTLNKICFSGRLRVELAPLVPMFPCFGAIVLTFMEKPFIDFNFSLGKLEVMSIGPGDLSVGKMVCDTIRNVINGLMVFPTKMVIPLLDDQDLLALANPTPSGVVELTVVGADNLRAADFGGK 687
            LP WYTDSEV RV+WLNK+L K+W +AS AT+ +F TTIQPILDS RPP I+ALGF+KVSLGTIPPKVVGIR LE KD+KAV+DIDLRWAGNAEF++EAGVKPVPLL+TLNKICFSGR+RVELAPLVP+FPCFGA+ LTFMEKPFID +F LGKL VMSIGPGD++VG +V + I+N++ GLMVFP K+V+P+LD+QD++ L+NPTP+GVV+LT+VG D L AAD GGK
Sbjct:  902 LPRWYTDSEVERVEWLNKMLDKMWVSASTATQDLFATTIQPILDSYRPPGISALGFKKVSLGTIPPKVVGIRALEMKDDKAVIDIDLRWAGNAEFMLEAGVKPVPLLITLNKICFSGRMRVELAPLVPVFPCFGAVGLTFMEKPFIDLSFKLGKLNVMSIGPGDMNVGALVSEHIKNIVAGLMVFPVKLVVPILDNQDIVGLSNPTPTGVVQLTIVGCDKLLAADIGGK 1130          
BLAST of mRNA_H-elongata_contig81809.15849.1 vs. uniprot
Match: A0A836CNP9_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNP9_9STRA)

HSP 1 Score: 228 bits (581), Expect = 2.620e-65
Identity = 100/217 (46.08%), Postives = 158/217 (72.81%), Query Frame = 1
Query:    1 LPAWYTDSEVNRVDWLNKILKKIWPTASGATEGMFKTTIQPILDSCRPPKINALGFRKVSLGTIPPKVVGIRTLETKDNKAVMDIDLRWAGNAEFVIEAGVKPVPLLVTLNKICFSGRLRVELAPLVPMFPCFGAIVLTFMEKPFIDFNFSLGKLEVMSIGPGDLSVGKMVCDTIRNVINGLM--VFPTKMVIPLLDDQDLLALANPTPSGVVELTV 645
            LP W++DSE  RV+WLNK+L+ +WP ASGAT+ M +  + P+L   +P  I+ LGFR +SLGTI P+VVGIRT ++ ++  V+D++++W GN + VIE G  P+P+ +TL+ I FSG++R EL+PLVP+ PCFG + + FME+P++DF F +G +++MS+GP +L++   V    + V+  ++  ++P KMVIP+++ +DL  LA P P+GV++L V
Sbjct:  431 LPKWFSDSETERVEWLNKLLQHMWPHASGATDAMVREMVDPMLAEYKPAAIDKLGFRVISLGTIAPRVVGIRTFDSNESCVVLDMEMKWNGNPKIVIEVGRSPLPITITLSNIRFSGKVRAELSPLVPLVPCFGNLSVCFMERPYVDFTFKVGAVDLMSLGPAELNIASAVSAVTKMVLQDIVPVLYPQKMVIPIIEPKDLAGLAAPAPTGVLQLEV 647          
BLAST of mRNA_H-elongata_contig81809.15849.1 vs. uniprot
Match: I2CP21_NANGC (Plant synaptotagmin (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP21_NANGC)

HSP 1 Score: 208 bits (530), Expect = 2.380e-60
Identity = 96/227 (42.29%), Postives = 154/227 (67.84%), Query Frame = 1
Query:    1 LPAWYTDSEVNRVDWLNKILKKIWPTASGATEGMFKTTIQPILDSCRPPKINALGFRKVSLGTIPPKVVGIRTLETKDNKAVMDIDLRWAGNAEFVIEAGVKPVPLLVTLNKICFSGRLRVELAPLVPMFPCFGAIVLTFMEKPFIDFNFSLGKLEVMSIGPGDLSVGKMVCDTIR-NVINGLMVFPTKMVIPLLDDQDLLALANPTPSGVVELTVVGADNLRAADF 678
            LPAW+ DS+V R  W+  +L+K+W   SG TE +  T +QP+LD+ RP  IN L   K  LGT+ P V G+R +ET ++   +D+ + +AGN + V+  G K +PL++ L+++ F G++R+EL PL+P  P FGAI  TFME+P++DF+F +  L+VM++G   ++V  +V + I+ NV+ G +++P ++VIP+++D DL  L NP P G++ ++V+ A NLR AD 
Sbjct:   79 LPAWFYDSDVERSAWMTAVLQKMWAAVSGMTEKIVMTYVQPVLDTYRPSIINHLEIVKCRLGTLAPTVTGVRFVETPEDVVRLDVHISYAGNPDIVLAVGYKGLPLILELSEVQFRGKIRIELNPLMPDIPGFGAITATFMEEPYLDFSFKVASLDVMAVGAPAMNVADIVTNIIKENVLKGFLLYPAQLVIPMIEDVDLERLRNPAPIGILSVSVLSARNLRIADI 305          
BLAST of mRNA_H-elongata_contig81809.15849.1 vs. uniprot
Match: A0A835YTN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN3_9STRA)

HSP 1 Score: 213 bits (541), Expect = 4.000e-60
Identity = 110/307 (35.83%), Postives = 170/307 (55.37%), Query Frame = 1
Query:    1 LPAWYTDSEVNRVDWLNKILKKIWPTASGATEGMFKTTIQPILDSCRPPKINALGFRKVSLGTIPPKVVGIRTLETKDNKAVMDIDLR----------------------------------------WAGNAEFVIEAGVKPVPLLVTLNKICFSGRLRVELAPLVPMFPCFGAIVLTFMEKPFIDFNFSLGKLEVMSIGPGDLSVGKMVCDTIRNV--------------------------------------INGLMVFPTKMVIPLLDDQDLLALANPTPSGVVELTVVGADNLRAADFGGK 687
            LP W+  ++V RV+W+NK+L+++WP A+GA   + KT ++P+L+  +PP +  L F+KV LGT  P+V+G+RT+ T  N A +++++R                                        WAG+ +FV+E G   +PL VTL+KI FSG+LR EL+PL+P  PCFGA+ +TFME+PFIDF F +G L+VMSIG GD+SV   +   ++++                                      I  +M++P K+VIP++D  D+  L NP+P GV++L ++GA+ L+ AD  GK
Sbjct:  213 LPFWFYGTDVERVEWMNKLLQQMWPHATGAAIVIVKTIVEPMLEEYKPPGVTTLKFQKVFLGTFAPRVIGVRTINTSSNTATLEMEVRPERCCMHQRSRALLRSITRPRSSNFNMHATAWGAFKYMVKWAGDPKFVVEVGRAMMPLTVTLSKIRFSGKLRAELSPLMPKIPCFGALAVTFMERPFIDFTFKVGSLDVMSIGSGDMSVAAAMSAIMKSLTHPLTHLFLPQXXXXXXXXXXXXXXXXXXXXXXXXXXTIQSMMLYPKKLVIPMVDGVDVGPLENPSPKGVLQLHIIGANKLKKADIVGK 519          
BLAST of mRNA_H-elongata_contig81809.15849.1 vs. uniprot
Match: A0A4D9D1J8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1J8_9STRA)

HSP 1 Score: 208 bits (529), Expect = 4.170e-58
Identity = 96/227 (42.29%), Postives = 153/227 (67.40%), Query Frame = 1
Query:    1 LPAWYTDSEVNRVDWLNKILKKIWPTASGATEGMFKTTIQPILDSCRPPKINALGFRKVSLGTIPPKVVGIRTLETKDNKAVMDIDLRWAGNAEFVIEAGVKPVPLLVTLNKICFSGRLRVELAPLVPMFPCFGAIVLTFMEKPFIDFNFSLGKLEVMSIGPGDLSVGKMVCDTIR-NVINGLMVFPTKMVIPLLDDQDLLALANPTPSGVVELTVVGADNLRAADF 678
            LPAW+ DS+V R  W+  +L+K+W   SG TE +  T +QP+LD+ RP  IN L   K  LGT+ P V G+R +ET +    +D+ + +AGN + V+  G K +PL++ L+++ F G++R+EL PL+P  P FGAI  TFME+P++DF+F +  L+VM++G   ++V  +V + I+ NV+ G +++P ++VIP+++D DL  L NP P G++ ++V+ A NLR AD 
Sbjct:  292 LPAWFYDSDVERSAWMTAVLQKMWAAVSGMTEKIVMTYVQPVLDTYRPSIINHLEIVKCRLGTLAPTVTGVRFVETPEEVVRLDVHISYAGNPDIVLAVGYKGLPLILELSEVQFRGKIRIELNPLMPDIPGFGAITATFMEEPYLDFSFKVASLDVMAVGAPAMNVADIVTNIIKENVLKGFLLYPAQLVIPMIEDVDLERLRNPAPIGILSVSVLSARNLRIADI 518          
BLAST of mRNA_H-elongata_contig81809.15849.1 vs. uniprot
Match: A0A482SDK6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDK6_9ARCH)

HSP 1 Score: 159 bits (402), Expect = 1.390e-41
Identity = 79/225 (35.11%), Postives = 134/225 (59.56%), Query Frame = 1
Query:    1 LPAWYTDSEVNRVDWLNKILKKIWPTASGATEGMFKTTIQPILDSCRPPKINALGFRKVSLGTIPPKVVGIRTLETKDNKAVMDIDLRWAGNAEFVIEAGVKPVP-LLVTLNKICFSGRLRVELAPLVPMFPCFGAIVLTFMEKPFIDFNFSLGKLEVMSIGPGDLSVGKMVCDTIRNVINGLMVFPTKMVIPLLDDQDLLALANPTPSGVVELTVVGADNLRAA 672
            +P+W +DSE  RV+W N  L+ +WP  + A E +    +QPILD  +P  +  L   + SLG+I PK++GIR +   ++   +D++LR+ G++   ++ G   +P L+V L +I  S  +RVEL  L+P  PCF A+ +T M+KPF+DF+  L  L+VM++G G+ ++  +V  TI N +   ++FP ++++ +  D D    A   P   + + V  A +LR+A
Sbjct:  104 MPSWLSDSEFQRVEWFNSTLQTLWPQITLAVEKLVAEEVQPILDRSKPAMLTTLKLSRCSLGSIAPKIMGIRFIHAGESSVRLDVELRFTGDSVVSLKVGTIALPALVVELAEINVSAIVRVELLDLIPRMPCFTALSITCMKKPFVDFSLKLAGLDVMNLGAGEYNIMSLVRSTINNALASTLIFPKRIIVKMDKDSDA-NYAETQPVATLVVKVEKAQDLRSA 327          
BLAST of mRNA_H-elongata_contig81809.15849.1 vs. uniprot
Match: A0A812VGV3_SYMMI (SYT3 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VGV3_SYMMI)

HSP 1 Score: 141 bits (356), Expect = 3.350e-39
Identity = 63/130 (48.46%), Postives = 94/130 (72.31%), Query Frame = 1
Query:  289 IEAGVKPVPLLVTLNKICFSGRLRVELAPLVPMFPCFGAIVLTFMEKPFIDFNFSLGKLEVMSIGPGDLSVGKMVCDTIRNVINGLMVFPTKMVIPLLDDQDLLALANPTPSGVVELTVVGADNLRAADF 678
            +E G K  PL + L+ + FS  +RVEL PL+P FPCFGAI + FM+KPF+DF+F +G L+VM++GP D +V  +V + IR++++G+MV+P K+V+P++ D D+  L  P P G++ LT+VGA  LR AD 
Sbjct:    3 LEVGRKSFPLTLELSDVRFSSIVRVELTPLMPQFPCFGAITICFMKKPFMDFSFKVGSLDVMNLGPADYNVASVVNNIIRSIVDGVMVYPKKLVVPMVSDVDMKKLTTPAPVGLLVLTIVGAKKLRVADM 132          
BLAST of mRNA_H-elongata_contig81809.15849.1 vs. uniprot
Match: A0A1Y1HWN3_KLENI (Calcium-dependent lipid-binding protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWN3_KLENI)

HSP 1 Score: 146 bits (368), Expect = 3.350e-37
Identity = 74/231 (32.03%), Postives = 131/231 (56.71%), Query Frame = 1
Query:    1 LPAWYTDSEVNRVDWLNKILKKIWPTASGATEGMFKTTIQPILDSCRPPKINALGFRKVSLGTIPPKVVGIRTLETKDNKAVMDIDLRWAGNAEFVIE-AGVKPVPLLVTLNKICFSGRLRVELAPLVPMFPCFGAIVLTFMEKPFIDFNFSLGKLEVMSIGPGDLSVGKMVCDTIRNVINGLMVFPTKMVIPLLD-DQDLLALANPTPSGVVELTVVGADNLRAADFGGK 687
            +P W    E+ RV WLNK L++IWP  + A   + K  ++PIL   +PP   ++ F K++LGTI P++ G++ +ET + + ++++D++W GN   ++    +  +PL V +  + F G  R+   PLV  FPCFGA+ +    KP +DF   +       IG     +  +V + +R  +   +++P+++V+P+L+ D   L L    P+G +++ +V A NL+  DF GK
Sbjct:   61 IPQWVQFPEMERVHWLNKELREIWPYVNKAASAIIKEQVEPILKQYKPPVFLSIKFNKLTLGTIAPQIAGVKVVETDEEEIILEVDVKWGGNPSIILGMTTIVGLPLQVQVKDVQFFGLFRLRFRPLVGQFPCFGALTIALRNKPSMDFRLKI-------IGGELPGIHGIVDNLLRTAVVDSLLWPSRIVVPILEGDYKDLELR---PTGTLDVKLVEARNLKNTDFIGK 281          
BLAST of mRNA_H-elongata_contig81809.15849.1 vs. uniprot
Match: UPI0010389965 (synaptotagmin-3-like isoform X2 n=1 Tax=Glycine soja TaxID=3848 RepID=UPI0010389965)

HSP 1 Score: 143 bits (360), Expect = 2.620e-36
Identity = 85/229 (37.12%), Postives = 125/229 (54.59%), Query Frame = 1
Query:    1 LPAWYTDSEVNRVDWLNKILKKIWPTASGATEGMFKTTIQPILDS-CRPPKINALGFRKVSLGTIPPKVVGIRTLETKDNKAVMDIDLRWAGNAEFVIEAGVKPVPLLVTLNKICFSGRLRVELAPLVPMFPCFGAIVLTFMEKPFIDFNFSLGKLEVMSIGPGDLSVGKMVCDTIRNVINGLMVFPTKMVIPLLDDQDLLALANPTPSGVVELTVVGADNLRAADFGG 684
            +P W    +  RVDWLNK L   WP    A   + ++  QPI        +I A+ F K+SLGT+PP V GI+ LET   + VM+  ++WAGN E V+   V  + + V L  +      RV L PLVP FPCF  IV++ MEKP +DF  ++   ++MSI PG   + + V +TI+  +  L ++P  + IP+LD+    ++A   P G++ + VV A  L   D  G
Sbjct:   59 IPLWVKTPDYERVDWLNKFLLDTWPFLDTAICKIIRSRAQPIFSEYIGKYQIKAIEFDKLSLGTLPPTVCGIKVLETNGKELVMEQVIKWAGNPEIVLSVYVASLKITVQLVDLQIFAAPRVTLRPLVPTFPCFANIVVSLMEKPHVDFGMNVLGGDIMSI-PG---LYRFVQETIKKQVANLYLWPQTLEIPILDES---SVAIKKPVGILHVNVVRAQKLLKMDLLG 280          
BLAST of mRNA_H-elongata_contig81809.15849.1 vs. uniprot
Match: A0JJW9_PHYPA (NTMC2Type1.1 protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0JJW9_PHYPA)

HSP 1 Score: 143 bits (360), Expect = 3.750e-36
Identity = 79/230 (34.35%), Postives = 128/230 (55.65%), Query Frame = 1
Query:    1 LPAWYTDSEVNRVDWLNKILKKIWPTASGATEGMFKTTIQPILDSCRPP-KINALGFRKVSLGTIPPKVVGIRTLETKDNKAVMDIDLRWAGNAEFVIEAGVKPVPLLVTLNKICFSGRLRVELAPLVPMFPCFGAIVLTFMEKPFIDFNFSLGKLEVMSIGPGDLSVGKMVCDTIRNVINGLMVFPTKMVIPLLDDQDLLALANPTPSGVVELTVVGADNLRAADFGGK 687
            +P W  + +  RVDWLN+ LK +WP    A   M +   QP +D   P  K++A+ F  ++LG++PP  VG++  ETK+ + +++   ++AGN   ++      +   V L  +  S   RV L PL+P+FPCF  I+++ M KP +DF   L   ++M+I PG   + + V D I + +  + ++P KM IP+ DD      A+  P G++E+T+V A NL   D  GK
Sbjct:   59 IPLWVKNPDYERVDWLNRFLKDMWPYLDKAICKMIREQAQPHIDLYGPKFKLDAIEFESLTLGSLPPTFVGMKVYETKEKEMILEPSFKFAGNPNIIVAVRAFGMKATVQLVDVQVSATARVTLKPLIPVFPCFSKIIVSLMSKPQVDFGLKLLGGDIMAI-PG---LYRYVQDNISSQVAKMYMWPKKMDIPVNDDPS----ASKKPVGIIEVTIVKATNLVRKDTFGK 280          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81809.15849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5N1_9PHAE2.200e-11374.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CNP9_9STRA2.620e-6546.08Calcium-activated chloride channel-domain-containi... [more]
I2CP21_NANGC2.380e-6042.29Plant synaptotagmin (Fragment) n=1 Tax=Nannochloro... [more]
A0A835YTN3_9STRA4.000e-6035.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D1J8_9STRA4.170e-5842.29Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A482SDK6_9ARCH1.390e-4135.11Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A812VGV3_SYMMI3.350e-3948.46SYT3 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A1Y1HWN3_KLENI3.350e-3732.03Calcium-dependent lipid-binding protein n=1 Tax=Kl... [more]
UPI00103899652.620e-3637.12synaptotagmin-3-like isoform X2 n=1 Tax=Glycine so... [more]
A0JJW9_PHYPA3.750e-3634.35NTMC2Type1.1 protein n=1 Tax=Physcomitrium patens ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81809contigH-elongata_contig81809:11..2391 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score378.3
Seed ortholog evalue2.7e-102
Seed eggNOG ortholog2880.D7FRL5
KEGG koko:K12486,ko:K19938
KEGG Pathwayko04144,map04144
EggNOG free text desc.C2 domain
EggNOG OGsCOG5038@1,KOG1012@2759,KOG2513@1,KOG2513@2759
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAnoctamin
Ec32 orthologEc-12_002590.1
Exons5
Model size696
Cds size696
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81809.15849.1prot_H-elongata_contig81809.15849.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig81809 11..2391 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931226.049051-CDS-H-elongata_contig81809:10..1061622931226.049051-CDS-H-elongata_contig81809:10..106Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81809 11..106 -
1691679749.6645558-CDS-H-elongata_contig81809:10..1061691679749.6645558-CDS-H-elongata_contig81809:10..106Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81809 11..106 -
1622931226.077727-CDS-H-elongata_contig81809:359..5721622931226.077727-CDS-H-elongata_contig81809:359..572Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81809 360..572 -
1691679749.6807697-CDS-H-elongata_contig81809:359..5721691679749.6807697-CDS-H-elongata_contig81809:359..572Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81809 360..572 -
1622931226.0956933-CDS-H-elongata_contig81809:1066..12521622931226.0956933-CDS-H-elongata_contig81809:1066..1252Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81809 1067..1252 -
1691679749.6960926-CDS-H-elongata_contig81809:1066..12521691679749.6960926-CDS-H-elongata_contig81809:1066..1252Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81809 1067..1252 -
1622931226.1159735-CDS-H-elongata_contig81809:1718..18531622931226.1159735-CDS-H-elongata_contig81809:1718..1853Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81809 1719..1853 -
1691679749.7179325-CDS-H-elongata_contig81809:1718..18531691679749.7179325-CDS-H-elongata_contig81809:1718..1853Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81809 1719..1853 -
1622931226.1436145-CDS-H-elongata_contig81809:2325..23911622931226.1436145-CDS-H-elongata_contig81809:2325..2391Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81809 2326..2391 -
1691679749.7292016-CDS-H-elongata_contig81809:2325..23911691679749.7292016-CDS-H-elongata_contig81809:2325..2391Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81809 2326..2391 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig81809.15849.1

>prot_H-elongata_contig81809.15849.1 ID=prot_H-elongata_contig81809.15849.1|Name=mRNA_H-elongata_contig81809.15849.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp
LPAWYTDSEVNRVDWLNKILKKIWPTASGATEGMFKTTIQPILDSCRPPK
INALGFRKVSLGTIPPKVVGIRTLETKDNKAVMDIDLRWAGNAEFVIEAG
VKPVPLLVTLNKICFSGRLRVELAPLVPMFPCFGAIVLTFMEKPFIDFNF
SLGKLEVMSIGPGDLSVGKMVCDTIRNVINGLMVFPTKMVIPLLDDQDLL
ALANPTPSGVVELTVVGADNLRAADFGGKVL*
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mRNA from alignment at H-elongata_contig81809:11..2391-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig81809.15849.1 ID=mRNA_H-elongata_contig81809.15849.1|Name=mRNA_H-elongata_contig81809.15849.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2381bp|location=Sequence derived from alignment at H-elongata_contig81809:11..2391- (Himanthalia elongata Himel1 dioecious)
CTTCCAGCCTGGTACACAGACTCGGAGGTGAACCGTGTGGACTGGCTCAA CAAGATTCTCAAAAAGGTACTGTACAGTCTGTGTACTTTTTGGGCTGCCC GCAGTATCATACAGAGGACACATTTCGACTCGCCACTCGCCACTCGCCAC AATCTTTACTGTGTTGGGGTTGGTCTGGCGACTCTCTTCGTCTCTTCGTG GCAACCGCCGTACAGAAACTACACCATGGTACAGTATTCCACAGTTGGGT ACAGTATAGTAGGCTGAAGTGATGGAGTTGAATTAATCTGAAGCTGAAGT GATGCGTGACCCGCCTGGGAGATAGGGTATATAGGTTATATAGGGTATAG CCATTGCCAAGCGTATAACATCATAAAATATGTTGTGACATCTGCGGGGC TCATGGGTAGTGACGTGCACGCGCTAAGTGAGTTTTCAATCGTGAAACGC TATACTCGTACTATTAATACTAAATCACTATTGACTTTTCCGTGTTAAAC TATCTTGCTGTATGTTGCTATGTATGCTGTATGGGCAGATATGGCCGACG GCGTCTGGCGCGACGGAGGGTATGTTTAAGACAACCATACAACCAATCCT CGACAGCTGTCGTCCCCCGAAAATCAACGCCCTCGGCTTTCGCAAGGTCT CGCTCGGCACCATCCCCCCCAAGGTACCTACCGATACAGTACGATGACTT AACACAATATGGTTCATGGCAGTAGCATCAGTTGTATACCCTGGTATTGG TAGTATACAGTATATAGCATCTAGTATAAGCATTTAGTATATGGTATATG GTGTATATACTATATATACTATATTATACTACGGCCGAGAAGCAAGGAGC ATACCCATCCGAGGCGAGGTTAAGCGAAGTCGTCAAATGATGACATGACT TTGGAGGGTACTGTACCGGTGGCCACCACCGTTCGTCTGGCACTCAAAAC GGATAGCGTATCTTGGACTCTTGGACATATAGTATAAGGTGCCGGATACA GTAGTATATTATATTGTATACCACTGGTTTTTTAATAGTGATTAGGCACA TGGCGCTCACCTCGACCATGACCCTGATTCGTAGCAATGGTCCTGGCACA TGCCGCTGCCCTCCGATGTGTGGACAATCATTTGGTAAGGTGGTTGGCAT TCGCACATTGGAGACCAAAGACAACAAGGCTGTGATGGACATTGACCTTC GCTGGGCCGGGAATGCGGAGTTCGTTATAGAGGCAGGCGTGAAGCCAGTG CCTTTATTGGTGACTCTCAACAAGATTTGTTTCTCGGGGCGGCTGAGGGT GGAGCTCGCGCCGCTGGTACCTATGGTAAGTTGCTTCATAATGACTGTTG TATAGGCTACAATAGAAAGTTATGTGTGTTTAGAGTAGTGCAGTACAGCC TAGTGACGGGAGCATTTTGTCAGCTTTAGAGTAACATCAGTATACCGCTA GTGCTTCAAAATAAAAAACGCCGTGGCTACGAGAGCTGGTACAATCGATA ACGATACACCAGATCATACACGAGATCATGGGGCGTTCTTTAGGAGCGCG CTGCCCCCCCCCAGCTTTGCTCCAAATCTCGACCACCCAAGGGTAGTGTT TGTTTGACCTTTGCTGCTGCTGCTATTGCTGCTCTACCCTACGTTTGTAT TTAGTTTAACTTTATGTTAAGATTATCGCCGACTGGCCGTATCGTATTCG TGTGAGCACCCTTGGATTCCGCGAAAATGTTTTGCGCCGACCGTTTGATA CCGTTTTATGTCATACTGGCTATGTTCACGTTTTGGTTATCGCGTATCTT GTGTGGTATCTCTCCCCAGTTCCCTTGTTTCGGAGCGATCGTGCTCACCT TCATGGAGAAGCCGTTCATCGATTTCAACTTCTCGCTGGGCAAGCTAGAG GTCATGAGCATCGGTCCTGGAGACTTGAGTGTGGGCAAGATGGTGTGCGA TACCATCAGGAACGTGATCAACGGCCTCATGGTGTTCCCTACGAAGATGG TGATTCCTCTCCTAGACGACCAAGATCTACTGGTGAGCCCTCTCTGCCAA GATGGGTCTGGGTCTGGGGTTCGCCGCTCGGAATAAGCATGCTCGTGCTC GTTTAGCCGTTTTACCGACAGAACAGCCGACAGAACGATCAATAAATGTG ATGTTACCGATACAGCCTACCATACCGTTTTACCGTTTTTAATGTCACCG TAGACTAGTAAATTTCCCGCCGAAATATTGTGTTACAAGTTAGAAGTTGA AGTTACCCTTCTTCTCCCCTTCTCCCCTTCTCCAGGCTCTGGCAAATCCT ACTCCGTCGGGTGTGGTAGAGCTGACTGTGGTTGGAGCAGATAACCTTCG AGCTGCAGACTTCGGCGGTAAGGTCTTGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig81809:11..2391-

>mRNA_H-elongata_contig81809.15849.1 ID=mRNA_H-elongata_contig81809.15849.1|Name=mRNA_H-elongata_contig81809.15849.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1392bp|location=Sequence derived from alignment at H-elongata_contig81809:11..2391- (Himanthalia elongata Himel1 dioecious)
CTTCCAGCCTGGTACACAGACTCGGAGGTGAACCGTGTGGACTGGCTCAA
CAAGATTCTCAAAAAGCTTCCAGCCTGGTACACAGACTCGGAGGTGAACC
GTGTGGACTGGCTCAACAAGATTCTCAAAAAGATATGGCCGACGGCGTCT
GGCGCGACGGAGGGTATGTTTAAGACAACCATACAACCAATCCTCGACAG
CTGTCGTCCCCCGAAAATCAACGCCCTCGGCTTTCGCAAGGTCTCGCTCG
GCACCATCCCCCCCAAGATATGGCCGACGGCGTCTGGCGCGACGGAGGGT
ATGTTTAAGACAACCATACAACCAATCCTCGACAGCTGTCGTCCCCCGAA
AATCAACGCCCTCGGCTTTCGCAAGGTCTCGCTCGGCACCATCCCCCCCA
AGGTGGTTGGCATTCGCACATTGGAGACCAAAGACAACAAGGCTGTGATG
GACATTGACCTTCGCTGGGCCGGGAATGCGGAGTTCGTTATAGAGGCAGG
CGTGAAGCCAGTGCCTTTATTGGTGACTCTCAACAAGATTTGTTTCTCGG
GGCGGCTGAGGGTGGAGCTCGCGCCGCTGGTACCTATGGTGGTTGGCATT
CGCACATTGGAGACCAAAGACAACAAGGCTGTGATGGACATTGACCTTCG
CTGGGCCGGGAATGCGGAGTTCGTTATAGAGGCAGGCGTGAAGCCAGTGC
CTTTATTGGTGACTCTCAACAAGATTTGTTTCTCGGGGCGGCTGAGGGTG
GAGCTCGCGCCGCTGGTACCTATGTTCCCTTGTTTCGGAGCGATCGTGCT
CACCTTCATGGAGAAGCCGTTCATCGATTTCAACTTCTCGCTGGGCAAGC
TAGAGGTCATGAGCATCGGTCCTGGAGACTTGAGTGTGGGCAAGATGGTG
TGCGATACCATCAGGAACGTGATCAACGGCCTCATGGTGTTCCCTACGAA
GATGGTGATTCCTCTCCTAGACGACCAAGATCTACTGTTCCCTTGTTTCG
GAGCGATCGTGCTCACCTTCATGGAGAAGCCGTTCATCGATTTCAACTTC
TCGCTGGGCAAGCTAGAGGTCATGAGCATCGGTCCTGGAGACTTGAGTGT
GGGCAAGATGGTGTGCGATACCATCAGGAACGTGATCAACGGCCTCATGG
TGTTCCCTACGAAGATGGTGATTCCTCTCCTAGACGACCAAGATCTACTG
GCTCTGGCAAATCCTACTCCGTCGGGTGTGGTAGAGCTGACTGTGGTTGG
AGCAGATAACCTTCGAGCTGCAGACTTCGGCGGTAAGGTCTTGTAAGCTC
TGGCAAATCCTACTCCGTCGGGTGTGGTAGAGCTGACTGTGGTTGGAGCA
GATAACCTTCGAGCTGCAGACTTCGGCGGTAAGGTCTTGTAA
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