mRNA_H-elongata_contig81759.15842.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig81759.15842.1
Unique NamemRNA_H-elongata_contig81759.15842.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: D7FX98_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX98_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 5.670e-122
Identity = 190/268 (70.90%), Postives = 218/268 (81.34%), Query Frame = 1
Query:    1 QEWTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFELRPPPPN-----------DAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASFADTLACERED 771
            QEW HLETQAIAAMNFRFSSKG+P  Y  RLAGNMQ++PP+L VAG SL YDYDPDLVRELLGH+VPSNMLL+V  REFKG T+KVE +YG+EYSCE +S++LI SWE CGRR+ELRLPEPNPVIATDF LR P               AP GPSLIRDD +CR+W+K+D  FRKPKLNVR++LV PVLY+SPESLVLA L V+LL EDLNEELYMA +AGLGL L L+KEAL L+LGGYSHK+KVL+ER V  L SF DTLA ++ED
Sbjct:  373 QEWIHLETQAIAAMNFRFSSKGDPSSYACRLAGNMQVYPPDLAVAGQSLRYDYDPDLVRELLGHMVPSNMLLMVVAREFKGETDKVEPYYGSEYSCEAISDDLIESWETCGRREELRLPEPNPVIATDFTLRSPXXXXXXXXXXXXXXSAPVGPSLIRDDDSCRVWHKTDAQFRKPKLNVRIRLVNPVLYDSPESLVLANLLVDLLKEDLNEELYMASEAGLGLNLYLTKEALCLSLGGYSHKMKVLLERVVHRLGSFGDTLAQDKED 640          
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A6G0XHN0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHN0_9STRA)

HSP 1 Score: 202 bits (513), Expect = 9.220e-56
Identity = 107/245 (43.67%), Postives = 147/245 (60.00%), Query Frame = 1
Query:    7 WTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFELRPPPPNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASF 741
            W   ETQ+IA MNFRF SK  PM Y + LA  MQ++P +  VAG SLL++YD D VRE+L  + P  + L+V  +EF+G T  VE WY   Y+  P++ E+++ W +  +   L +P PN  I  DFEL   P   A   P+L+RDDA+CRLW K+D TF KPKLN+ +   +P +Y SP ++VL  L V  + + L E  Y A  AG+   L  + +AL L  GGYS K+ VL +  VK +  F
Sbjct:  363 WVFDETQSIALMNFRFRSKETPMNYATSLASKMQIYPVKHIVAGSSLLFEYDADKVREILALLTPERVRLMVVSKEFQGKTTSVEPWYEAAYNDLPIAPEVLQRWTSTTKESSLAIPHPNAFIPRDFELVKNPTEGA--FPTLLRDDASCRLWCKTDTTFLKPKLNICMAFHSPEIYTSPAAVVLTDLLVRAVKDQLTEYTYDAELAGMRYSLNFTTKALELYGGGYSDKLPVLFQLIVKSMVHF 605          
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A024U1F2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1F2_9STRA)

HSP 1 Score: 197 bits (500), Expect = 5.520e-54
Identity = 111/247 (44.94%), Postives = 142/247 (57.49%), Query Frame = 1
Query:    7 WTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFELRPPPPNDAPPG--PSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASF 741
            W   ETQ+IA MNFRF SK  PM Y + LA  MQL+P +  VAG SLLY+YDP  V+ +   + P  M L+V G+EF+G T  VE WY T YS  P+   LI  W    R   L  P PN  I  +F+L       A PG  P L+RDDAA RLW K+D TF KPKLN+ +   +PV+Y SP S+VL  L V  + + L E  Y A  AG+   L+ +  A+ L  GGYS K+ VL +  +K +  F
Sbjct:  363 WVFEETQSIALMNFRFRSKETPMNYATALATRMQLYPVQHIVAGSSLLYEYDPIQVKSIFSLLTPDRMRLLVVGKEFEGTTTDVEPWYETAYSDTPIEPSLIERWSNPARSAALFCPHPNAFIPHNFDLV----ATATPGAVPILLRDDAAARLWVKTDTTFFKPKLNICLAFHSPVIYNSPTSVVLTDLLVRAIKDQLTEFTYDAELAGMRYSLSFTTTAVELYGGGYSDKLPVLFDLILKQIVQF 605          
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A485LAZ7_9STRA (Aste57867_17268 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAZ7_9STRA)

HSP 1 Score: 196 bits (499), Expect = 7.670e-54
Identity = 109/242 (45.04%), Postives = 140/242 (57.85%), Query Frame = 1
Query:    7 WTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFELRPPPPNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHL 732
            W   ETQ+IA MNFRF SK  PM Y + LA  MQ++P    VAG SLLY +D   V  +L  + P+ M L+V  + F+GHT  VE WY   YS   ++  LI+ W    R   L  P PN  I  DF+L   P +   P P L+RDD ACRLW K+D TFRKPKLN+ +   TPV+Y SP S+VL  L V  + + L E  Y A  AG+   L+ + +AL L  GGYS K+ VL +  V +L
Sbjct:  363 WVFDETQSIALMNFRFRSKETPMNYATSLATKMQIYPVPHIVAGSSLLYAFDAGKVEHVLSLLTPARMRLMVVSKAFEGHTTDVEPWYEAAYSDTAIAPALIQRWSTPTREPSLAFPHPNAFIPHDFDLVTAPTSG--PHPVLLRDDTACRLWCKTDTTFRKPKLNICMTFNTPVIYTSPASVVLTDLMVRAIKDQLTEYTYDAELAGMRYSLSFTTKALELYGGGYSDKLPVLFQLIVTNL 602          
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A397BRM1_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BRM1_9STRA)

HSP 1 Score: 193 bits (490), Expect = 9.390e-54
Identity = 108/246 (43.90%), Postives = 144/246 (58.54%), Query Frame = 1
Query:    7 WTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFEL-RPPPPNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASF 741
            W   ETQ+IA MNFRF SK  P+ Y + LA  MQL+P +  VAG SLLY Y+P  V  +L  + P  M L V  ++F+G    VE WYGT Y+   L   LI+ WE+  R + L  P PN  I  +F+L   P P      P L+RDDAA RLW K+D TF KPKLN+ + L +P++Y+SP S+VL  L V  + + L E  Y A  AG+   L+ +  AL L  GGYS K+ VL++  V ++  F
Sbjct:   65 WVFDETQSIALMNFRFRSKETPINYATSLATRMQLYPVQHIVAGSSLLYTYNPVQVESILSQLTPRRMRLTVVAKDFEGKATDVEPWYGTLYAESALPPSLIQRWESPARTEALFCPHPNAFIPHNFDLVTTPTPGKV---PVLLRDDAAARLWVKTDTTFLKPKLNICLALHSPLIYQSPTSVVLTDLLVRAIKDQLTEYTYDAELAGMRYSLSFTATALELYGGGYSDKLPVLVQLIVANMVHF 307          
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: W4GHK7_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GHK7_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.420e-53
Identity = 109/246 (44.31%), Postives = 146/246 (59.35%), Query Frame = 1
Query:    7 WTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFEL-RPPPPNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASF 741
            W   ETQ+IA MNFRF SK  P+ Y + LA  MQL+P +  VAG SLLY Y+P  V  +L  + P  M L V  ++F+G T  VE WYGT Y+   L   LI+ WE+  R + L  P PN  I  +F+L   P P +    P L+RDDAA RLW K+D TF KPKLN+ + L +P++Y+SP S+VL  L V  + + L E  Y A  AG+   L+ +  AL L  GGYS K+ VL++  V ++  F
Sbjct:  363 WVFDETQSIALMNFRFRSKETPINYATSLATRMQLYPVQHIVAGSSLLYTYNPVQVESILSQLTPRRMRLTVVAKDFEGKTTDVEPWYGTLYTESALPPSLIQRWESPARTEALFCPHPNAFIPHNFDLVTTPTPGNV---PVLLRDDAAARLWVKTDTTFLKPKLNICLALHSPLIYQSPTSVVLTDLLVRAIKDQLTEYTYDAELAGMRYSLSFTATALELYGGGYSDKLPVLVQLIVANMVHF 605          
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A418FIR8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FIR8_9STRA)

HSP 1 Score: 193 bits (490), Expect = 5.730e-53
Identity = 108/246 (43.90%), Postives = 144/246 (58.54%), Query Frame = 1
Query:    7 WTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFEL-RPPPPNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASF 741
            W   ETQ+IA MNFRF SK  P+ Y + LA  MQL+P +  VAG SLLY Y+P  V  +L  + P  M L V  ++F+G    VE WYGT Y+   L   LI+ WE+  R + L  P PN  I  +F+L   P P      P L+RDDAA RLW K+D TF KPKLN+ + L +P++Y+SP S+VL  L V  + + L E  Y A  AG+   L+ +  AL L  GGYS K+ VL++  V ++  F
Sbjct:  233 WVFDETQSIALMNFRFRSKETPINYATSLATRMQLYPVQHIVAGSSLLYTYNPVQVESILSQLTPRRMRLTVVAKDFEGKATDVEPWYGTLYAESALPPSLIQRWESPARTEALFCPHPNAFIPHNFDLVTTPTPGKV---PVLLRDDAAARLWVKTDTTFLKPKLNICLALHSPLIYQSPTSVVLTDLLVRAIKDQLTEYTYDAELAGMRYSLSFTATALELYGGGYSDKLPVLVQLIVANMVHF 475          
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A1S4EFX8_DIACI (insulin-degrading enzyme n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S4EFX8_DIACI)

HSP 1 Score: 189 bits (479), Expect = 2.340e-51
Identity = 97/255 (38.04%), Postives = 143/255 (56.08%), Query Frame = 1
Query:    1 QEWTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRDELRLPEPNPVIATDFELRPPPPNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASFADTLACER 765
            QEW   E + I  + FRF  K  P  YVS L  N+ L+P    +  P +L +Y PDL+ +LL  + P NM L +  ++F+   +KVE WYGT+Y+ +P+SEE +  W      D   LP PN  IATDF L P  P D  P P+++ +    R W+K D  +R PKLN   + ++P  Y  PE   +  LF++L  + LNE  Y A+ AGL  +L+ +K  + L + GYSHK  VL+ + +  LA F++ +  +R
Sbjct:  258 QEWIFKEYKEILDIEFRFKEKEKPSSYVSSLCSNLHLYPLNEILVAPYMLTEYKPDLISDLLNRLRPDNMRLALVAKQFEPLCDKVEPWYGTKYTRQPMSEEQLTKWTNVSSNDAFHLPSPNEFIATDFSLLPSDP-DISPHPTILYNSPLIRAWHKQDDEYRVPKLNASFEFISPYAYLDPECTNMTHLFISLFKDALNEYSYDAKLAGLAWDLSNTKYGMMLGISGYSHKQSVLLSKVLDKLADFSNHIDPKR 511          
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A7S2L3H0_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L3H0_9STRA)

HSP 1 Score: 189 bits (480), Expect = 3.100e-51
Identity = 99/248 (39.92%), Postives = 150/248 (60.48%), Query Frame = 1
Query:    1 QEWTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSW-EACGRRDE----LRLPEPNPVIATDFELRPPP--PNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAV 723
            Q+W   ET  +A  +FRF SK  P+ Y   LAG M L+ P+  ++GP  L++YDP  + E L    PSN+LL+V+ ++F+G T   E WYGT++  + + E  +  W EAC   ++    LRLP+ N +I+TDF++R  P  P D+   P L+ D A CR+WYK D  F  PKLNV V++ + V+ ESPE+ VLA L++ +L E   E  YMA  A L    + + + + L+L GY+HK+ +L+ + +
Sbjct:  386 QKWVFDETSEVANCSFRFLSKRRPISYTCSLAGYMHLYEPQHFLSGPYKLFEYDPASIEECLSCFTPSNLLLIVTQKKFEGETKLSEKWYGTDHDIDIIDENCVSQWLEACSTHEKYNGNLRLPDKNDLISTDFDIREDPDFPLDS---PRLLMDSAKCRVWYKPDNVFSLPKLNVLVRMKSNVVTESPEAAVLALLWIQVLDEHSVEFTYMASMASLHCNFSNATDGIELHLSGYNHKLDILLTKVI 630          
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Match: A0A7S1BHP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BHP1_9STRA)

HSP 1 Score: 180 bits (457), Expect = 5.870e-50
Identity = 95/248 (38.31%), Postives = 141/248 (56.85%), Query Frame = 1
Query:    1 QEWTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLLYDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLSEELIRSWEACGRRD----ELRLPEPNPVIATDFELRPPPPNDAPPGPSLIRDDAACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLNEELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHL 732
            QEWT  ETQ ++  NFRF SK  P+ +  ++A NM L+P E  ++GP  +YDYDP+++ + +  +V  N ++ V  + F+G T + E WYGT+YS   +S    R W A    D    +L  P  N +I TDF LR P P    PG  L+RD   CR+++K+D T+R PKLNV + L T   Y +P   VL     ++LTE      Y+A  A L      +K+ + +NL GY+HK+ VL+ + ++ L
Sbjct:  136 QEWTLRETQTVSDNNFRFLSKRRPIDFTQQVAANMHLYPVEHIISGPYKIYDYDPNIITKFVDKMVVENCIVFVVAKAFEGKTTQKEKWYGTDYSLADISPAQARRWTAASVSDPSLSDLGYPARNDLICTDFALRDPAPKREVPG--LLRDTPRCRVFFKTDDTYRMPKLNVLMALNTGAAYATPADAVLTVFLADILTEHCMHFSYLASMADLNSGSYNAKKGIVINLSGYNHKLHVLLSKILEEL 381          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81759.15842.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX98_ECTSI5.670e-12270.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6G0XHN0_9STRA9.220e-5643.67Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024U1F2_9STRA5.520e-5444.94Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A485LAZ7_9STRA7.670e-5445.04Aste57867_17268 protein n=1 Tax=Aphanomyces stella... [more]
A0A397BRM1_9STRA9.390e-5443.90Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
W4GHK7_9STRA1.420e-5344.31Uncharacterized protein n=10 Tax=Aphanomyces astac... [more]
A0A418FIR8_9STRA5.730e-5343.90Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A1S4EFX8_DIACI2.340e-5138.04insulin-degrading enzyme n=1 Tax=Diaphorina citri ... [more]
A0A7S2L3H0_9STRA3.100e-5139.92Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S1BHP1_9STRA5.870e-5038.31Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81759contigH-elongata_contig81759:59..2619 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score380.6
Seed ortholog evalue5.9e-103
Seed eggNOG ortholog2880.D7FX98
KEGG koko:K01408
KEGG Pathwayko05010,map05010
EggNOG free text desc.Belongs to the peptidase M16 family
EggNOG OGsCOG1025@1,KOG0959@2759
Ec32 ortholog descriptionPeptidase M16, C-terminal domain
Ec32 orthologEc-26_004080.1
EC3.4.24.56
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Exons5
Model size771
Cds size771
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81759.15842.1prot_H-elongata_contig81759.15842.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig81759 59..2619 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931225.2909906-CDS-H-elongata_contig81759:58..3131622931225.2909906-CDS-H-elongata_contig81759:58..313Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81759 59..313 +
1691679749.4189951-CDS-H-elongata_contig81759:58..3131691679749.4189951-CDS-H-elongata_contig81759:58..313Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81759 59..313 +
1622931225.3103364-CDS-H-elongata_contig81759:915..10411622931225.3103364-CDS-H-elongata_contig81759:915..1041Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81759 916..1041 +
1691679749.4293928-CDS-H-elongata_contig81759:915..10411691679749.4293928-CDS-H-elongata_contig81759:915..1041Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81759 916..1041 +
1622931225.3321347-CDS-H-elongata_contig81759:1229..14031622931225.3321347-CDS-H-elongata_contig81759:1229..1403Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81759 1230..1403 +
1691679749.4379785-CDS-H-elongata_contig81759:1229..14031691679749.4379785-CDS-H-elongata_contig81759:1229..1403Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81759 1230..1403 +
1622931225.3455184-CDS-H-elongata_contig81759:2039..21411622931225.3455184-CDS-H-elongata_contig81759:2039..2141Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81759 2040..2141 +
1691679749.4474688-CDS-H-elongata_contig81759:2039..21411691679749.4474688-CDS-H-elongata_contig81759:2039..2141Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81759 2040..2141 +
1622931225.3629503-CDS-H-elongata_contig81759:2505..26191622931225.3629503-CDS-H-elongata_contig81759:2505..2619Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81759 2506..2619 +
1691679749.457507-CDS-H-elongata_contig81759:2505..26191691679749.457507-CDS-H-elongata_contig81759:2505..2619Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81759 2506..2619 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig81759.15842.1

>prot_H-elongata_contig81759.15842.1 ID=prot_H-elongata_contig81759.15842.1|Name=mRNA_H-elongata_contig81759.15842.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=257bp
QEWTHLETQAIAAMNFRFSSKGNPMGYVSRLAGNMQLFPPELTVAGPSLL
YDYDPDLVRELLGHIVPSNMLLVVSGREFKGHTNKVESWYGTEYSCEPLS
EELIRSWEACGRRDELRLPEPNPVIATDFELRPPPPNDAPPGPSLIRDDA
ACRLWYKSDGTFRKPKLNVRVKLVTPVLYESPESLVLATLFVNLLTEDLN
EELYMARQAGLGLELTLSKEALYLNLGGYSHKIKVLMERAVKHLASFADT
LACERED
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mRNA from alignment at H-elongata_contig81759:59..2619+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig81759.15842.1 ID=mRNA_H-elongata_contig81759.15842.1|Name=mRNA_H-elongata_contig81759.15842.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2561bp|location=Sequence derived from alignment at H-elongata_contig81759:59..2619+ (Himanthalia elongata Himel1 dioecious)
CAGGAGTGGACCCACCTCGAGACTCAGGCGATCGCCGCGATGAACTTCCG CTTTTCGAGCAAGGGCAACCCTATGGGGTACGTTTCGCGGCTCGCGGGCA ACATGCAGCTATTCCCACCCGAGCTGACCGTCGCGGGCCCGTCCTTGCTG TACGATTATGACCCCGACCTCGTGCGAGAGCTGCTGGGACACATTGTACC GAGTAACATGCTGCTAGTGGTCAGTGGGAGGGAGTTCAAGGGGCACACAA ATAAGGTGAGCGACTTCAGGTCGGGGGACGGGGGCGAACTGCGGACCGGG TCGCGCGACAGTCATGCTCAATCGAATTCTTGGGCAACTGTGTGTGTGTG TGTGTGTGTGTTACTGTTTCGTTCGCCTGAGGCTGCTACGTCCTGCTTTT AGATCGAGCGCAGTATGATAGATAACAAACAGTCGCGGCCAATTCAGTGT GCGCCTGCAACATTTTTGTGCTGGTTTGACCCCCCTTCCGCTTCCCCCTT CAGCTTTGCTTCTTTGCTGTGCGAGTCGATATATTTGGAAGTAATGTCGC GCACGTCCCACGCGAGGAGAAGCAGTCGACCGTTTGAAGTATATTGTCAC CTGCTAGGGGGGGGTACTGACTCCTCAAACGGTATGGTGACGACGAGGCC TGATGGTTTCTCTTTACCGCCAGAGAGAGAGACGATAGTCGAGGGCAACT CCCCTACTCGCGGGTTAAAAAGCGTGGATAGGCGGCGGGCGGAGGAGGGA AATTATCGCCTCCGATCGGATCGCCGTGGCCCCTAAAGATAGTTTGCCGT TTTGAACAACCGTCGCGCGTCTTATTGTGAACGCCATGTATTGTAACGGG AAAGCAGGTTGAATCGTGGTACGGGACCGAATACTCGTGCGAGCCCCTGT CCGAGGAGTTGATCAGGTCTTGGGAGGCATGCGGGCGAAGAGATGAGCTG CGCCTACCGGAGCCCAACCCGGTGATCGCAACGGTGAGGGATCTGCCGTA TACACCGATATTATCCGTCTAGACACGACCAACACAACCGTTAATGACGT CAGCGGCGGCGGGTGCGCTTTTTCTTCCTGCCCCCCATTTCCCCCGCTCC CTACTCCACTTAACCCACCAAAAATATTTTTGTCCTTACCCTCCTCTCCC TACCCGGCGTAACACGAACAGGACTTCGAGCTCCGCCCACCCCCGCCGAA TGACGCCCCCCCGGGTCCTTCCCTCATCCGCGACGACGCGGCGTGTCGCC TATGGTACAAGAGCGACGGGACGTTCCGCAAGCCCAAGCTCAATGTGCGG GTTAAGCTAGTGACCCCCGTCCTCTACGAATCGCCGGAGAGCTTGGTGAG AAGGAAGGGGTGCTTTCGCTTGCGATAGATGTTGCTTGCGTGCTTCCGGT GATAGCGGCGCGCTATTTTAGGGGAACGAGGAGGAAGGCTAAACTGCCGC TGGGCTATACGTTGCGCTCTACCCTGCCGTGGGCGTATAAGTTCATCTTG ATGGACGATGGCGCCGGGGCTATTGACTATGAGGGGTCGGGATGGTCGAT TATTATCACAGTCAGTACATCGCTTTAGGCGAAGCGACTAAGTACGTTTA CGCTCGCTCGAGCCCCGTGAAGGCGGCGGCTTCGGCACAAGGCGCAAAAG CTGTGCGCACACCGTTACGTGGATTGTAAGCGCGTGTTTTCGAGCCTTCC AAGCGATCGTGCGCCATAGACGTTTGTTTATTGTCCAAGCTCGTTTTTTT TTGTATTTATTTTTCAAGGGAGAGAAGCCTGAGCTTCGGGAAGTATCCCC CTGACTCTTTTTTCCTCCGCCAAGAACCATCCGTTATTGTCGTTTCTGGC TGACCGCAGCGTTTTTGAGCATACGTGGCACGGTTGTCGATCAGTAGATA GCGGCTGAGGTGTAAAATCCCGTGGTCGATCGAGCAAGACCCTTGCGAAT GAGTAACCTTGGGTTTGAACGCAAAACAAAGGTTTTGGCGACGCTGTTCG TGAACCTCCTCACGGAGGACCTCAACGAAGAGCTGTATATGGCCAGGCAA GCGGGTCTCGGCCTTGAGCTGACCCTCTCGAAGGTGAGTAAAGCAGCCTA CGAAAACATACCCGTCGTCTTGCGACACCGCCTGACCGTCCCAACTAGTC ACAGCAGCGGCCCCAGCCGGCCGCGCAGGTAGCAGAGCTAGGAATATACG ACGGCGAGCGCTCTTGCTTCGCCCCGTACAGACAACACAACATTTTACCA ATTTCGTAGAACGCTTCGCTCTGCAGTCTAAGCCCGTCCGTCCGCCTAGC TCTTTTAGGCTCTTTGCCTTGGCTCGTCGATGCTGCTTGCGCACGCGCTG CGGATGTTATCCCCACCTACCCACACCCGCCGGCACGGCCCGCTTCCGCG GCTACGCACGACGAATATTCCGCGTGTCCGTGTCCGCGCCCGGACAGGAG GCCCTGTATCTAAACCTCGGCGGTTACAGCCACAAGATAAAGGTGCTGAT GGAGCGCGCGGTTAAACACCTGGCGTCGTTCGCCGATACCCTGGCGTGCG AGAGGGAAGAC
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Coding sequence (CDS) from alignment at H-elongata_contig81759:59..2619+

>mRNA_H-elongata_contig81759.15842.1 ID=mRNA_H-elongata_contig81759.15842.1|Name=mRNA_H-elongata_contig81759.15842.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1542bp|location=Sequence derived from alignment at H-elongata_contig81759:59..2619+ (Himanthalia elongata Himel1 dioecious)
CAGGAGTGGACCCACCTCGAGACTCAGGCGATCGCCGCGATGAACTTCCG
CTTTTCGAGCAAGGGCAACCCTATGGGGTACGTTTCGCGGCTCGCGGGCA
ACATGCAGCTATTCCCACCCGAGCTGACCGTCGCGGGCCCGTCCTTGCTG
TACGATTATGACCCCGACCTCGTGCGAGAGCTGCTGGGACACATTGTACC
GAGTAACATGCTGCTAGTGGTCAGTGGGAGGGAGTTCAAGGGGCACACAA
ATAAGCAGGAGTGGACCCACCTCGAGACTCAGGCGATCGCCGCGATGAAC
TTCCGCTTTTCGAGCAAGGGCAACCCTATGGGGTACGTTTCGCGGCTCGC
GGGCAACATGCAGCTATTCCCACCCGAGCTGACCGTCGCGGGCCCGTCCT
TGCTGTACGATTATGACCCCGACCTCGTGCGAGAGCTGCTGGGACACATT
GTACCGAGTAACATGCTGCTAGTGGTCAGTGGGAGGGAGTTCAAGGGGCA
CACAAATAAGGTTGAATCGTGGTACGGGACCGAATACTCGTGCGAGCCCC
TGTCCGAGGAGTTGATCAGGTCTTGGGAGGCATGCGGGCGAAGAGATGAG
CTGCGCCTACCGGAGCCCAACCCGGTGATCGCAACGGTTGAATCGTGGTA
CGGGACCGAATACTCGTGCGAGCCCCTGTCCGAGGAGTTGATCAGGTCTT
GGGAGGCATGCGGGCGAAGAGATGAGCTGCGCCTACCGGAGCCCAACCCG
GTGATCGCAACGGACTTCGAGCTCCGCCCACCCCCGCCGAATGACGCCCC
CCCGGGTCCTTCCCTCATCCGCGACGACGCGGCGTGTCGCCTATGGTACA
AGAGCGACGGGACGTTCCGCAAGCCCAAGCTCAATGTGCGGGTTAAGCTA
GTGACCCCCGTCCTCTACGAATCGCCGGAGAGCTTGGACTTCGAGCTCCG
CCCACCCCCGCCGAATGACGCCCCCCCGGGTCCTTCCCTCATCCGCGACG
ACGCGGCGTGTCGCCTATGGTACAAGAGCGACGGGACGTTCCGCAAGCCC
AAGCTCAATGTGCGGGTTAAGCTAGTGACCCCCGTCCTCTACGAATCGCC
GGAGAGCTTGGTTTTGGCGACGCTGTTCGTGAACCTCCTCACGGAGGACC
TCAACGAAGAGCTGTATATGGCCAGGCAAGCGGGTCTCGGCCTTGAGCTG
ACCCTCTCGAAGGTTTTGGCGACGCTGTTCGTGAACCTCCTCACGGAGGA
CCTCAACGAAGAGCTGTATATGGCCAGGCAAGCGGGTCTCGGCCTTGAGC
TGACCCTCTCGAAGGAGGCCCTGTATCTAAACCTCGGCGGTTACAGCCAC
AAGATAAAGGTGCTGATGGAGCGCGCGGTTAAACACCTGGCGTCGTTCGC
CGATACCCTGGCGTGCGAGAGGGAAGACGAGGCCCTGTATCTAAACCTCG
GCGGTTACAGCCACAAGATAAAGGTGCTGATGGAGCGCGCGGTTAAACAC
CTGGCGTCGTTCGCCGATACCCTGGCGTGCGAGAGGGAAGAC
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