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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 405 |
| Cds size | 405 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622931224.7364628-CDS-H-elongata_contig81699:104..200 | 1622931224.7364628-CDS-H-elongata_contig81699:104..200 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig81699 105..200 - |
| 1691679749.2118053-CDS-H-elongata_contig81699:104..200 | 1691679749.2118053-CDS-H-elongata_contig81699:104..200 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig81699 105..200 - |
| 1622931224.7510183-CDS-H-elongata_contig81699:1366..1567 | 1622931224.7510183-CDS-H-elongata_contig81699:1366..1567 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig81699 1367..1567 - |
| 1691679749.221153-CDS-H-elongata_contig81699:1366..1567 | 1691679749.221153-CDS-H-elongata_contig81699:1366..1567 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig81699 1367..1567 - |
| 1622931224.7733934-CDS-H-elongata_contig81699:2082..2190 | 1622931224.7733934-CDS-H-elongata_contig81699:2082..2190 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig81699 2083..2190 - |
| 1691679749.2297251-CDS-H-elongata_contig81699:2082..2190 | 1691679749.2297251-CDS-H-elongata_contig81699:2082..2190 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig81699 2083..2190 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig81699.15835.1 >prot_H-elongata_contig81699.15835.1 ID=prot_H-elongata_contig81699.15835.1|Name=mRNA_H-elongata_contig81699.15835.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
QDFKQAEFHYSEALRINPRAAFAHNSLGHLLHHRYKEFEAAEKHYRRAIR
LQWRSPDAHYNLGCLLQHQKEDLVEAERHYRHAIKCDPKHGMAQYNLGWV
LEKVKNDLQGAGKCYQAAIDADPEDKDARRRLAKV back to topmRNA from alignment at H-elongata_contig81699:105..2190- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig81699.15835.1 ID=mRNA_H-elongata_contig81699.15835.1|Name=mRNA_H-elongata_contig81699.15835.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2086bp|location=Sequence derived from alignment at H-elongata_contig81699:105..2190- (Himanthalia elongata Himel1 dioecious)
CAGGACTTCAAACAAGCGGAGTTCCACTACAGCGAGGCGTTACGCATCAA
TCCACGGGCGGCGTTCGCGCACAACAGCCTAGGGCACCTTCTGCATCACA
GATATAAGGTCGGATGGAAATCCTTGAGACCACACAACGCGCAGACAAAA
TATTTATTTATTTAGTCTTCGAGCTTCGCCGCTAGCCCTTTTCATTCATT
GCGGGATATCGTTCGCCCCCCTCCCACCCCCCCTTGATTATGAACATCAA
CCCCAATGGGCGGTCTTTCCCCTGAATAATTGATCATCGATTGCCCATTA
GTAGTGTGTGTGTGTGTGTGTATTTATCAAATTGCACATAACCGCGCAGA
CCGGCTCTGTCATGCTATTTAATAGCCCTTCTAGGCTACTCTCGCATTGA
TCCCCCCCCAATGGGGGATTCAATTATACTATCCTAGATTCATTTGCGCT
TTCGTTTGTACTTCTTTGTTCACCATATAGCTTCGGTCGACCCCTATTGG
ACCAAGGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTTTATTTTTTGTTTTATCCTCAGCCCCCGCCTCTCTGCCCTGTATATCT
TCCTTCCTTCGTTCCTTCTTCAGGAGTTCGAGGCCGCGGAGAAGCATTAC
CGTAGGGCCATACGCCTGCAATGGCGCTCCCCGGACGCCCACTACAACCT
CGGATGCCTGTTGCAGCACCAGAAGGAGGACCTCGTCGAGGCCGAGCGCC
ACTATCGCCATGCCATCAAATGCGACCCTAAGCACGGCATGGCCCAGTAC
AACTTGGGCTGGGTGCTCGAGAAGGTGGATATAAATAAATAGGGATTGAG
GGGGTGGGGTTGCTAAAGCGTCCCCGGATGACGGAGGAGATCAAAATTAA
TTTCCATACCGTTGATTCAATCGTCGTATCTCCGGTCGTAGAGCTTAACC
CTTCTGGAACTTAATTTCAAGTTTTATATTGAATTTAGAATAGAAAAAAC
AGATCGAGTTCCATAGGGGTTAGGATGGGATACATGGTAACCATAGGCTA
GGGGATGGGTACGTTTTTTCTCCGGAGGGATCGGAGGGGACGGATTTGAC
CCTCACCTTCTCTCCCCTCCCCGAATCACGGATTCTCTGCTGCTGCTGCT
GCCCAATACACATTGAGTAAAATCTTGAAGAGCAGCAGGAGCAATCGATT
GCTACCTACCTACCGCTACTCCTTGCGTATTACGTACCGCCGCTGGGAAC
AACACCACCGCTTTGTTTGGTAAAAAAACTATACACTCACACACACACAC
ATATATCCATAAACACCCACACACATACATCCCCATTGGGAGGAGGACCC
ATTGGGAGGAGGATCAATGCGAGAGTAGCCTAGAAGGACTACTGTAGCAT
GACAGGGCCGGATTGCGCGGTTATATGATGTGCAATTTAATAAATAAATA
CCACACACATTTACTCCCCCATTGGGAGGAGGATCAATGCGAGGAGAGAG
TAGTCTAGAAGGACTAGCATGACAAAAAGCCGGATTGCGCGGTTATGTGC
TGTGCAATTTAATAAATACACACATTATCCCTCAAGATGTTCTATTCTTC
TATCCCATTCACGTTGCTTACGCAACCGCGCCGGACTAGTATCTTTTCTG
GAAGCGTTTGAGGGCCCGCCATCGATTCCCATCTGTTAATATACTAAATA
CTACCGCATGTACTATCAACAGTATGTTCATGAGACTAGGAACATATTAT
GAGATGAAGAATGGGACTTCCCAGTCTCACGAACATACTGTTTATCATCG
ATGCCGCCGAACGGATGGGACTTCGAATTGAAACTGGCTGCCTGCCGCCG
TTAGTCCTCTCCCTCTCGTTGACCCACTGCGAGAAAAGTTCGAGGAATAA
CATTCGGAATAACTCAGCCAATGAAAATTGCTGAATCAGAGGATGTATCT
CCCCCCCCCCCCTCAATGATTGACTGTCTCCAACCGAAAGGTGAAGAATG
ATTTGCAGGGGGCAGGAAAGTGCTATCAGGCAGCCATCGACGCGGACCCG
GAAGACAAAGACGCAAGGCGACGCCTCGCTAAGGTT back to topCoding sequence (CDS) from alignment at H-elongata_contig81699:105..2190- >mRNA_H-elongata_contig81699.15835.1 ID=mRNA_H-elongata_contig81699.15835.1|Name=mRNA_H-elongata_contig81699.15835.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=810bp|location=Sequence derived from alignment at H-elongata_contig81699:105..2190- (Himanthalia elongata Himel1 dioecious)
CAGGACTTCAAACAAGCGGAGTTCCACTACAGCGAGGCGTTACGCATCAA
TCCACGGGCGGCGTTCGCGCACAACAGCCTAGGGCACCTTCTGCATCACA
GATATAAGCAGGACTTCAAACAAGCGGAGTTCCACTACAGCGAGGCGTTA
CGCATCAATCCACGGGCGGCGTTCGCGCACAACAGCCTAGGGCACCTTCT
GCATCACAGATATAAGGAGTTCGAGGCCGCGGAGAAGCATTACCGTAGGG
CCATACGCCTGCAATGGCGCTCCCCGGACGCCCACTACAACCTCGGATGC
CTGTTGCAGCACCAGAAGGAGGACCTCGTCGAGGCCGAGCGCCACTATCG
CCATGCCATCAAATGCGACCCTAAGCACGGCATGGCCCAGTACAACTTGG
GCTGGGTGCTCGAGAAGGAGTTCGAGGCCGCGGAGAAGCATTACCGTAGG
GCCATACGCCTGCAATGGCGCTCCCCGGACGCCCACTACAACCTCGGATG
CCTGTTGCAGCACCAGAAGGAGGACCTCGTCGAGGCCGAGCGCCACTATC
GCCATGCCATCAAATGCGACCCTAAGCACGGCATGGCCCAGTACAACTTG
GGCTGGGTGCTCGAGAAGGTGAAGAATGATTTGCAGGGGGCAGGAAAGTG
CTATCAGGCAGCCATCGACGCGGACCCGGAAGACAAAGACGCAAGGCGAC
GCCTCGCTAAGGTTGTGAAGAATGATTTGCAGGGGGCAGGAAAGTGCTAT
CAGGCAGCCATCGACGCGGACCCGGAAGACAAAGACGCAAGGCGACGCCT
CGCTAAGGTT back to top
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