mRNA_H-elongata_contig81436.15811.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig81436.15811.1 vs. uniprot
Match: A0A6H5L123_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L123_9PHAE) HSP 1 Score: 183 bits (464), Expect = 2.340e-52 Identity = 88/111 (79.28%), Postives = 94/111 (84.68%), Query Frame = 1
Query: 25 WDVIALQEVWHARERDALRKAALATGLRYSRYFEKGCGAPILGSGTGGTGLLVLSRFPITESLFWRFSANGQPYQLLHCDYLGGKGLGLVRLHTPAGAVDLYISHLHADYS 357
WDVIALQEVWHARERDALR+AAL GLRYSR+FE GCGAP+LG G GGTGLL+LSRFPITES F +PYQL H DYLGGKGLGL RLHTPAGAVDLY+SHLH DYS
Sbjct: 68 WDVIALQEVWHARERDALRRAALVAGLRYSRHFEHGCGAPLLGPGMGGTGLLILSRFPITESFF-------RPYQLQHSDYLGGKGLGLARLHTPAGAVDLYVSHLHGDYS 171
BLAST of mRNA_H-elongata_contig81436.15811.1 vs. uniprot
Match: A0A0H5R271_9EUKA (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R271_9EUKA) HSP 1 Score: 132 bits (331), Expect = 4.550e-34 Identity = 61/111 (54.95%), Postives = 83/111 (74.77%), Query Frame = 1
Query: 25 WDVIALQEVWHARERDALRKAALATGLRYSRYFEKGCGAPILGSGTGGTGLLVLSRFPITESLFWRFSANGQPYQLLHCDYLGGKGLGLVRLHTPAGAVDLYISHLHADYS 357
+DV+ALQEVWH+RERD LR AA + G+ Y+ YF G GAP G+ GTGLL+LS+ PI + ++ RF NG+PY+L H DYL G+G+GL+RL +P G +D Y++HLHA Y+
Sbjct: 76 YDVVALQEVWHSRERDVLRDAARSYGMIYAHYFACGVGAPFW-PGSHGTGLLILSKLPIDDVIWKRFLVNGKPYKLHHSDYLAGRGVGLLRLSSPCGPIDFYVTHLHAMYA 185
BLAST of mRNA_H-elongata_contig81436.15811.1 vs. uniprot
Match: A0A0G4IKQ8_PLABS (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IKQ8_PLABS) HSP 1 Score: 130 bits (328), Expect = 1.550e-33 Identity = 63/110 (57.27%), Postives = 81/110 (73.64%), Query Frame = 1
Query: 25 WDVIALQEVWHARERDALRKAALATGLRYSRYFEKGCGAPILGSGTGGTGLLVLSRFPITESLFWRFSANGQPYQLLHCDYLGGKGLGLVRLHTPAGAVDLYISHLHADY 354
+DVIALQEVWHARERDALR A GL Y+ YF G G P G+ GTG+LVLSR PI + ++ RF NG+PY+L H DYL G+G+GL+RL +P G +D++++HLHA Y
Sbjct: 83 YDVIALQEVWHARERDALRTAGRQAGLIYAHYFAGGIGFPFW-PGSHGTGVLVLSRLPIVDVVWKRFLINGKPYKLHHSDYLAGRGVGLLRLSSPTGPIDVFVTHLHAMY 191
BLAST of mRNA_H-elongata_contig81436.15811.1 vs. uniprot
Match: D8LH10_ECTSI (Similar to neutral Sphingomyelinase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH10_ECTSI) HSP 1 Score: 118 bits (295), Expect = 9.970e-29 Identity = 58/81 (71.60%), Postives = 68/81 (83.95%), Query Frame = 1
Query: 25 WDVIALQEVWHARERDALRKAALATGLRYSRYFEKGCGAPILGSGTGGTGLLVLSRFPITESLF-WRFSAN--GQPYQLLH 258
WDVIALQEVWHARERDALR+AALA GLRYSR+FE GCGAP+LG G GGTGLL+LSRFPITES F R+ ++ Q +++ H
Sbjct: 158 WDVIALQEVWHARERDALRRAALAAGLRYSRHFEHGCGAPLLGPGMGGTGLLILSRFPITESFFRGRYKSHRVAQAFEVAH 238
BLAST of mRNA_H-elongata_contig81436.15811.1 vs. uniprot
Match: A0A225WFP6_9STRA (Sphingomyelin phosphodiesterase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WFP6_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.670e-28 Identity = 54/122 (44.26%), Postives = 83/122 (68.03%), Query Frame = 1
Query: 1 VAQFHKRDWDVIALQEVWHARERDALRKAALATGLRYSRYFEKGCGAPI-LGSGTGGTGLLVLSRFPITESLFWRFSANGQPYQLLHCDYLGGKGLGLVRLHTPAGAVDLYISHLHADYSSR 363
+A D++++ LQEVWH RER+ + A +G Y YF G P +G+ + GTGLLVLS+FPI+ +L+ FS +G+PY L D++ KG+GL+R+ TPAG +D+Y++HL A+Y++R
Sbjct: 69 IASAISNDYELVVLQEVWHLRERNLVISKAQQSGFHYYHYFNPAVGFPFPMGADSFGTGLLVLSKFPISNALYHSFSLSGRPYALHESDFVANKGVGLLRVETPAGQIDVYVTHLLANYNAR 190
BLAST of mRNA_H-elongata_contig81436.15811.1 vs. uniprot
Match: K3X5W6_GLOUD (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5W6_GLOUD) HSP 1 Score: 115 bits (287), Expect = 1.070e-27 Identity = 53/121 (43.80%), Postives = 80/121 (66.12%), Query Frame = 1
Query: 1 VAQFHKRDWDVIALQEVWHARERDALRKAALATGLRYSRYFEKGCGAPI-LGSGTGGTGLLVLSRFPITESLFWRFSANGQPYQLLHCDYLGGKGLGLVRLHTPAGAVDLYISHLHADYSS 360
+A + +++++ LQE+WH RER+ + A G Y YF G P+ LG + GTGLLVLS+FPI L+ F+ +G+PY L D++ KG GL+R+HTPAG +DLY++HL A+Y++
Sbjct: 72 IANAIEGEYEIVVLQEIWHRRERNLIISRAEQAGFHYYHYFNPAIGFPVPLGHDSFGTGLLVLSKFPIVGVLYHSFALSGRPYALHEADFVANKGAGLLRVHTPAGQIDLYVTHLIANYNA 192
BLAST of mRNA_H-elongata_contig81436.15811.1 vs. uniprot
Match: W2Q0A8_PHYPN (Endo/exonuclease/phosphatase domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2Q0A8_PHYPN) HSP 1 Score: 115 bits (287), Expect = 1.100e-27 Identity = 52/120 (43.33%), Postives = 81/120 (67.50%), Query Frame = 1
Query: 1 VAQFHKRDWDVIALQEVWHARERDALRKAALATGLRYSRYFEKGCGAPI-LGSGTGGTGLLVLSRFPITESLFWRFSANGQPYQLLHCDYLGGKGLGLVRLHTPAGAVDLYISHLHADYS 357
+A D+D++ LQE+WH RER+ + A +G Y YF G P +G+ + GTGLL+LS+FPI+ +L+ FS +G+PY L D++ KG+GL+R+ TPAG +D+Y++HL A+Y+
Sbjct: 69 IASAISSDFDLVVLQEIWHIRERNLVISKAQKSGFHYYHYFNPAVGFPFPMGADSFGTGLLILSKFPISNALYHSFSLSGRPYALHESDFVANKGVGLLRVETPAGQIDVYVTHLLANYN 188
BLAST of mRNA_H-elongata_contig81436.15811.1 vs. uniprot
Match: A0A6A3YCH0_9STRA (Endo/exonuclease/phosphatase domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YCH0_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.310e-27 Identity = 52/121 (42.98%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 1 VAQFHKRDWDVIALQEVWHARERDALRKAALATGLRYSRYFEKGCGAPI-LGSGTGGTGLLVLSRFPITESLFWRFSANGQPYQLLHCDYLGGKGLGLVRLHTPAGAVDLYISHLHADYSS 360
+A D++++ LQE+WH RER+ + A +G Y YF G P +G+ + GTGLLVLS+FPI+ +L+ FS +G+PY L D++ KG+GL+R+ TPAG +D+Y++HL A+Y++
Sbjct: 69 IASAISSDYELVVLQEIWHLRERNLVISKAQQSGFHYYHYFNPAVGFPFPMGADSFGTGLLVLSKFPISSALYHSFSLSGRPYALHESDFVANKGVGLLRVDTPAGQIDVYVTHLLANYNA 189
BLAST of mRNA_H-elongata_contig81436.15811.1 vs. uniprot
Match: A0A5D6XTJ0_9STRA (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTJ0_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.520e-27 Identity = 55/113 (48.67%), Postives = 77/113 (68.14%), Query Frame = 1
Query: 25 WDVIALQEVWHARERDALRKAALATGLRYSRYFEKGCGAPI-LGSGTGGTGLLVLSRFPITESLFWRFSANGQPYQLLHCDYLGGKGLGLVRLHTPAGAVDLYISHLHADYSS 360
+DV+ LQE+WH RER+ L A GL + YF G P+ LG + GTGLLVLSRFP+ L+ F+ +G+PY L D++ KG+GL+R+ TPAG VDLY++HL A+Y++
Sbjct: 81 FDVVVLQEIWHRRERNLLISRAARAGLGFYHYFNPAIGFPVPLGHDSFGTGLLVLSRFPLEGVLYHSFALSGRPYALHEADFVANKGVGLLRVQTPAGPVDLYVTHLLANYNA 193
BLAST of mRNA_H-elongata_contig81436.15811.1 vs. uniprot
Match: A0A8K1CFL7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFL7_PYTOL) HSP 1 Score: 114 bits (284), Expect = 3.110e-27 Identity = 52/120 (43.33%), Postives = 79/120 (65.83%), Query Frame = 1
Query: 1 VAQFHKRDWDVIALQEVWHARERDALRKAALATGLRYSRYFEKGCGAPI-LGSGTGGTGLLVLSRFPITESLFWRFSANGQPYQLLHCDYLGGKGLGLVRLHTPAGAVDLYISHLHADYS 357
+A + +D++ QE+WH RER+ + A G Y YF+ G P+ LG+G GTGLLV+S+FPI +++ FS +G+PY L D++ KG+GL+R+ TPAG DLY++HL A+Y+
Sbjct: 73 IANAIQEGYDIVTFQEIWHRRERNIIITRAEQAGYHYYHYFQPAVGFPLPLGAGAFGTGLLVVSKFPIVSAMYHPFSLSGRPYALHEADFVANKGVGLLRVQTPAGQFDLYVTHLIANYN 192 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81436.15811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig81436.15811.1 >prot_H-elongata_contig81436.15811.1 ID=prot_H-elongata_contig81436.15811.1|Name=mRNA_H-elongata_contig81436.15811.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp VAQFHKRDWDVIALQEVWHARERDALRKAALATGLRYSRYFEKGCGAPILback to top mRNA from alignment at H-elongata_contig81436:364..1510+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig81436.15811.1 ID=mRNA_H-elongata_contig81436.15811.1|Name=mRNA_H-elongata_contig81436.15811.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1147bp|location=Sequence derived from alignment at H-elongata_contig81436:364..1510+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig81436:364..1510+ >mRNA_H-elongata_contig81436.15811.1 ID=mRNA_H-elongata_contig81436.15811.1|Name=mRNA_H-elongata_contig81436.15811.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=726bp|location=Sequence derived from alignment at H-elongata_contig81436:364..1510+ (Himanthalia elongata Himel1 dioecious)back to top |