mRNA_H-elongata_contig81362.15797.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig81362.15797.1
Unique NamemRNA_H-elongata_contig81362.15797.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig81362.15797.1 vs. uniprot
Match: D7G6R8_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R8_ECTSI)

HSP 1 Score: 478 bits (1231), Expect = 1.180e-167
Identity = 245/255 (96.08%), Postives = 250/255 (98.04%), Query Frame = 1 
Query:   13 QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREILKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGLDMQKQEIKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVCSILQR 777
            QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDRE+LKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGG+DMQKQE+KEAVELPLTHF+LYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSV+FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKV     R
Sbjct:   55 QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNR 309
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BLAST of mRNA_H-elongata_contig81362.15797.1 vs. uniprot
Match: A0A835ZCH4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH4_9STRA)

HSP 1 Score: 465 bits (1196), Expect = 1.330e-162
Identity = 239/255 (93.73%), Postives = 247/255 (96.86%), Query Frame = 1 
Query:   13 QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREILKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGLDMQKQEIKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVCSILQR 777
            QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNE+IDANYGIVGSTAGSNYFVRILSTLDRE LKPNTSVALHRHSHSVVEILPPESDSTIQLMQE+PDV Y DIGG+DMQKQE+KEAVELPLTHFELY+QIGIDPPRGVL+YGPPGTGKTMMAKAVANAT+ASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKV     R
Sbjct:   37 QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEMIDANYGIVGSTAGSNYFVRILSTLDREKLKPNTSVALHRHSHSVVEILPPESDSTIQLMQEKPDVAYTDIGGMDMQKQEVKEAVELPLTHFELYRQIGIDPPRGVLLYGPPGTGKTMMAKAVANATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNR 291
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BLAST of mRNA_H-elongata_contig81362.15797.1 vs. uniprot
Match: A0A6H5L461_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L461_9PHAE)

HSP 1 Score: 477 bits (1227), Expect = 1.170e-161
Identity = 244/254 (96.06%), Postives = 249/254 (98.03%), Query Frame = 1 
Query:   16 EEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREILKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGLDMQKQEIKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVCSILQR 777
            EEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDRE+LKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGG+DMQKQE+KEAVELPLTHF+LYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSV+FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKV     R
Sbjct:  497 EEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNR 750
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BLAST of mRNA_H-elongata_contig81362.15797.1 vs. uniprot
Match: K8Z3K8_NANGC (26S proteasome regulatory subunit T3 n=5 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z3K8_NANGC)

HSP 1 Score: 456 bits (1174), Expect = 4.800e-159
Identity = 232/255 (90.98%), Postives = 246/255 (96.47%), Query Frame = 1 
Query:   13 QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREILKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGLDMQKQEIKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVCSILQR 777
            QEEYIKDEMKNLKRELIRAKEE+KRIQSVPLVIGQFNE+IDA+YGIVGSTAGS Y+VRILSTLDRE LKPN SVALHRHSHSVV+ILPPESDSTIQLMQE+PDV+Y+DIGG+D+QKQE+KEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVA AT+ASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPS++FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKV     R
Sbjct:   51 QEEYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDSTIQLMQEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNR 305
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BLAST of mRNA_H-elongata_contig81362.15797.1 vs. uniprot
Match: A0A7S2XX15_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX15_9STRA)

HSP 1 Score: 453 bits (1165), Expect = 8.800e-158
Identity = 229/255 (89.80%), Postives = 245/255 (96.08%), Query Frame = 1 
Query:   13 QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREILKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGLDMQKQEIKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVCSILQR 777
            QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNE+ID NYGI GSTAGSNY+VRILSTLDRE LKPNTSVALHRHSH+VVEILPPESDSTIQL+QE+PDV+Y DIGG+DMQKQE++EAVELPLTHFELYKQIGIDPPRGVL+YGPPGTGKTM+AKAVANAT+ASFISVVGSEFVQKYLGEGPRMVRDVFRLA+ENSPS++FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+T VKV     R
Sbjct:   44 QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEMIDTNYGIAGSTAGSNYYVRILSTLDREKLKPNTSVALHRHSHAVVEILPPESDSTIQLLQEKPDVSYSDIGGMDMQKQELREAVELPLTHFELYKQIGIDPPRGVLLYGPPGTGKTMIAKAVANATTASFISVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTTVKVIMATNR 298
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BLAST of mRNA_H-elongata_contig81362.15797.1 vs. uniprot
Match: A0A6V1PIA9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PIA9_HETAK)

HSP 1 Score: 448 bits (1152), Expect = 9.570e-156
Identity = 224/255 (87.84%), Postives = 245/255 (96.08%), Query Frame = 1 
Query:   13 QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREILKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGLDMQKQEIKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVCSILQR 777
            QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNE++DANYGIVGSTAGS+Y VRILSTLDRE LKPNTSVALHRHSH+VVE+LPPESDSTIQLM E+PDVTY  +GGLDMQKQE++EAVELPLTHF+LYKQIGIDPPRGVL+YGPPGTGKTM+AKAVAN+T+A+FIS+VGSEFVQKYLGEGPRMVRDVFRLAREN+P+++FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKV     R
Sbjct:   48 QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEMLDANYGIVGSTAGSSYMVRILSTLDREALKPNTSVALHRHSHAVVEVLPPESDSTIQLMAEKPDVTYQQVGGLDMQKQELREAVELPLTHFQLYKQIGIDPPRGVLLYGPPGTGKTMIAKAVANSTTAAFISMVGSEFVQKYLGEGPRMVRDVFRLARENAPAIVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQATNVKVIMCTNR 302
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BLAST of mRNA_H-elongata_contig81362.15797.1 vs. uniprot
Match: A0A7S2RC03_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RC03_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 1.720e-155
Identity = 231/255 (90.59%), Postives = 242/255 (94.90%), Query Frame = 1 
Query:   13 QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREILKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGLDMQKQEIKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVCSILQR 777
            QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQF+E+ID NYGIV STAGSNY+VRILSTLDRE LKPN SVALHRHSHSVV+ILPPESDSTIQLM E+PDV Y DIGGLD+QKQE++EAVELPLT FELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANAT+ASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPS+IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKV     R
Sbjct:   66 QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFSEMIDENYGIVMSTAGSNYYVRILSTLDREQLKPNASVALHRHSHSVVDILPPESDSTIQLMAEKPDVGYQDIGGLDIQKQEVREAVELPLTQFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNR 320
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BLAST of mRNA_H-elongata_contig81362.15797.1 vs. uniprot
Match: H3HD78_PHYRM (AAA domain-containing protein n=21 Tax=Oomycota TaxID=4762 RepID=H3HD78_PHYRM)

HSP 1 Score: 439 bits (1130), Expect = 1.910e-152
Identity = 220/257 (85.60%), Postives = 246/257 (95.72%), Query Frame = 1 
Query:   13 QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREILKPNTSVALHRHSHSVVEILPPESDSTIQLMQ--ERPDVTYHDIGGLDMQKQEIKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVCSILQR 777
            QE YIKDEMKNLKRELIRAKEE+KRIQSVPLVIGQF E++DANYGIVGSTAGSNY+VRILSTLDRE LKPN+SVALHRHSH+VV++LPPESDS+IQ+MQ  ERPDV+Y DIGG+D+QKQE++EAVELPLTHF+LYKQIG+DPPRGVLMYGPPGTGKTM+AKAVANAT+A+FISVVGSEFVQKYLGEGPRMVRDVFRLA+ENSP+++FIDE+DAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKV     R
Sbjct:   44 QEGYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFLEMVDANYGIVGSTAGSNYYVRILSTLDREKLKPNSSVALHRHSHAVVDVLPPESDSSIQMMQMSERPDVSYSDIGGMDIQKQEVREAVELPLTHFDLYKQIGVDPPRGVLMYGPPGTGKTMLAKAVANATTAAFISVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIVFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQATNVKVIMATNR 300
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BLAST of mRNA_H-elongata_contig81362.15797.1 vs. uniprot
Match: F0YA82_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA82_AURAN)

HSP 1 Score: 439 bits (1129), Expect = 2.280e-152
Identity = 223/255 (87.45%), Postives = 241/255 (94.51%), Query Frame = 1 
Query:   13 QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREILKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGLDMQKQEIKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVCSILQR 777
            QE+YIKDE+KNLKRELIRAKEEIKRIQSVPLVIGQFNE++DA YGI  STAGS Y+VR+LSTLDRE LKPN+SVALHRHSHSVV++LPPESDSTIQLM E+P VTY DIGGLD+QKQE++EAVELPLT FELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAN+T+ASFISVVGSEFVQKYLGEGPRMVRDVFRLAREN+P++IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKV     R
Sbjct:   40 QEQYIKDEIKNLKRELIRAKEEIKRIQSVPLVIGQFNEMVDATYGIASSTAGSVYYVRVLSTLDREKLKPNSSVALHRHSHSVVDVLPPESDSTIQLMMEKPKVTYKDIGGLDVQKQEMREAVELPLTQFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANSTTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNR 294
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BLAST of mRNA_H-elongata_contig81362.15797.1 vs. uniprot
Match: A0A7R9UGQ3_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGQ3_9STRA)

HSP 1 Score: 439 bits (1128), Expect = 4.410e-152
Identity = 220/255 (86.27%), Postives = 241/255 (94.51%), Query Frame = 1 
Query:   13 QEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREILKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGLDMQKQEIKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVCSILQR 777
            QE YIKDEM+NLKRELIRA+EE+KRIQSVPLVIG FNE+IDA+YGIV STAGSNY+VRILST+DRE LKPN SV LHRHSH+VV+++PPE DSTIQLMQE+PDV+Y DIGG+DMQKQE++EAVELPLTHFELYKQIGIDPP GVL+YGPPGTGKTMMAKAVANAT+ASFISVVGSEFVQKYLGEGPRMVRDVFRLA++NSPSV+FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKV     R
Sbjct:   49 QETYIKDEMRNLKRELIRAQEEVKRIQSVPLVIGNFNEMIDADYGIVSSTAGSNYYVRILSTVDRETLKPNASVGLHRHSHAVVDVVPPECDSTIQLMQEKPDVSYADIGGMDMQKQEVREAVELPLTHFELYKQIGIDPPGGVLLYGPPGTGKTMMAKAVANATTASFISVVGSEFVQKYLGEGPRMVRDVFRLAKDNSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNR 303
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81362.15797.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6R8_ECTSI1.180e-16796.08AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZCH4_9STRA1.330e-16293.73P-loop containing nucleoside triphosphate hydrolas... [more]
A0A6H5L461_9PHAE1.170e-16196.06Reverse transcriptase domain-containing protein n=... [more]
K8Z3K8_NANGC4.800e-15990.9826S proteasome regulatory subunit T3 n=5 Tax=Monod... [more]
A0A7S2XX15_9STRA8.800e-15889.80Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1PIA9_HETAK9.570e-15687.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2RC03_9STRA1.720e-15590.59Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
H3HD78_PHYRM1.910e-15285.60AAA domain-containing protein n=21 Tax=Oomycota Ta... [more]
F0YA82_AURAN2.280e-15287.45AAA domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7R9UGQ3_9STRA4.410e-15286.27Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81362contigH-elongata_contig81362:953..2368 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.0
Seed ortholog evalue8.6e-134
Seed eggNOG ortholog2880.D7G6R8
Preferred namePSMC4
KEGG koko:K03063
KEGG Pathwayko03050,ko05169,map03050,map05169
KEGG ModuleM00341
GOsGO:0000166,GO:0000228,GO:0000502,GO:0000731,GO:0000785,GO:0000790,GO:0001673,GO:0001701,GO:0001824,GO:0002020,GO:0002082,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0005829,GO:0005838,GO:0005911,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006281,GO:0006301,GO:0006302,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006511,GO:0006515,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006914,GO:0006919,GO:0006950,GO:0006970,GO:0006972,GO:0006974,GO:0006996,GO:0007034,GO:0007041,GO:0007088,GO:0007275,GO:0007346,GO:0008047,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008333,GO:0008540,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009109,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009506,GO:0009628,GO:0009790,GO:0009792,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010562,GO:0010564,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0010918,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0010965,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016192,GO:0016197,GO:0016234,GO:0016236,GO:0016462,GO:0016504,GO:0016567,GO:0016579,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017025,GO:0017076,GO:0017111,GO:0017144,GO:0018130,GO:0018193,GO:0018196,GO:0018279,GO:0019058,GO:0019079,GO:0019219,GO:0019220,GO:0019222,GO:0019362,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019899,GO:0019902,GO:0019903,GO:0019904,GO:0019941,GO:0019985,GO:0022411,GO:0022607,GO:0022624,GO:0023051,GO:0023056,GO:0030054,GO:0030071,GO:0030111,GO:0030162,GO:0030163,GO:0030177,GO:0030234,GO:0030312,GO:0030433,GO:0030554,GO:0030808,GO:0030810,GO:0030970,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031399,GO:0031401,GO:0031593,GO:0031595,GO:0031597,GO:0031625,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032509,GO:0032510,GO:0032527,GO:0032553,GO:0032555,GO:0032559,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033554,GO:0034098,GO:0034214,GO:0034399,GO:0034404,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034976,GO:0035639,GO:0035800,GO:0035861,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0036402,GO:0036435,GO:0036503,GO:0036513,GO:0042175,GO:0042176,GO:0042221,GO:0042287,GO:0042288,GO:0042325,GO:0042327,GO:0042391,GO:0042623,GO:0042726,GO:0042728,GO:0042802,GO:0042886,GO:0042981,GO:0043009,GO:0043065,GO:0043067,GO:0043068,GO:0043073,GO:0043085,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043248,GO:0043254,GO:0043280,GO:0043281,GO:0043412,GO:0043413,GO:0043457,GO:0043467,GO:0043531,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044389,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044454,GO:0044464,GO:0044877,GO:0045184,GO:0045202,GO:0045732,GO:0045787,GO:0045838,GO:0045840,GO:0045842,GO:0045862,GO:0045893,GO:0045898,GO:0045899,GO:0045931,GO:0045935,GO:0045937,GO:0045944,GO:0045981,GO:0046034,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046907,GO:0048193,GO:0048471,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051186,GO:0051187,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051276,GO:0051336,GO:0051345,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051788,GO:0051881,GO:0051983,GO:0051984,GO:0052547,GO:0052548,GO:0055044,GO:0055086,GO:0060255,GO:0060260,GO:0060261,GO:0060828,GO:0061134,GO:0061136,GO:0061641,GO:0061857,GO:0061919,GO:0062012,GO:0062013,GO:0062033,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070085,GO:0070646,GO:0070647,GO:0070682,GO:0070727,GO:0070841,GO:0070842,GO:0070887,GO:0071218,GO:0071310,GO:0071702,GO:0071704,GO:0071705,GO:0071712,GO:0071840,GO:0071897,GO:0071944,GO:0071985,GO:0072387,GO:0072389,GO:0072521,GO:0072524,GO:0080090,GO:0090068,GO:0090085,GO:0090263,GO:0090304,GO:0090734,GO:0097159,GO:0097352,GO:0097367,GO:0098772,GO:0098796,GO:0098827,GO:0140030,GO:1900371,GO:1900373,GO:1900542,GO:1900544,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1902680,GO:1903003,GO:1903004,GO:1903006,GO:1903007,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903506,GO:1903508,GO:1903513,GO:1903578,GO:1903580,GO:1903715,GO:1903862,GO:1904288,GO:1904949,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990381,GO:1990730,GO:2000058,GO:2000060,GO:2000112,GO:2000116,GO:2000142,GO:2000144,GO:2000152,GO:2000158,GO:2001056,GO:2001141,GO:2001169,GO:2001171,GO:2001252
EggNOG free text desc.proteasome-activating ATPase activity
EggNOG OGsCOG1222@1,KOG0727@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03051
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-26_000370.1
Exons4
Model size777
Cds size777
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81362.15797.1prot_H-elongata_contig81362.15797.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig81362 953..2368 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931221.0644124-CDS-H-elongata_contig81362:952..11061622931221.0644124-CDS-H-elongata_contig81362:952..1106Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81362 953..1106 +
1691679747.5735302-CDS-H-elongata_contig81362:952..11061691679747.5735302-CDS-H-elongata_contig81362:952..1106Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81362 953..1106 +
1622931221.0833523-CDS-H-elongata_contig81362:1361..15731622931221.0833523-CDS-H-elongata_contig81362:1361..1573Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81362 1362..1573 +
1691679747.5868483-CDS-H-elongata_contig81362:1361..15731691679747.5868483-CDS-H-elongata_contig81362:1361..1573Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81362 1362..1573 +
1622931221.0967317-CDS-H-elongata_contig81362:1748..19101622931221.0967317-CDS-H-elongata_contig81362:1748..1910Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81362 1749..1910 +
1691679747.5974417-CDS-H-elongata_contig81362:1748..19101691679747.5974417-CDS-H-elongata_contig81362:1748..1910Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81362 1749..1910 +
1622931221.1127486-CDS-H-elongata_contig81362:2119..23681622931221.1127486-CDS-H-elongata_contig81362:2119..2368Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81362 2120..2368 +
1691679747.6054883-CDS-H-elongata_contig81362:2119..23681691679747.6054883-CDS-H-elongata_contig81362:2119..2368Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81362 2120..2368 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig81362.15797.1

>prot_H-elongata_contig81362.15797.1 ID=prot_H-elongata_contig81362.15797.1|Name=mRNA_H-elongata_contig81362.15797.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=259bp
MECAQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGI
VGSTAGSNYFVRILSTLDREILKPNTSVALHRHSHSVVEILPPESDSTIQ
LMQERPDVTYHDIGGLDMQKQEIKEAVELPLTHFELYKQIGIDPPRGVLM
YGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLA
RENSPSVIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTN
VKVCSILQR
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mRNA from alignment at H-elongata_contig81362:953..2368+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig81362.15797.1 ID=mRNA_H-elongata_contig81362.15797.1|Name=mRNA_H-elongata_contig81362.15797.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1416bp|location=Sequence derived from alignment at H-elongata_contig81362:953..2368+ (Himanthalia elongata Himel1 dioecious)
ATGGAATGCGCACAGGAGGAGTACATTAAGGACGAAATGAAGAATCTTAA
GAGAGAGCTCATCCGCGCGAAGGAAGAGATAAAGCGTATACAGTCCGTAC
CGCTCGTGATCGGACAATTCAACGAAATTATCGACGCCAACTACGGCATC
GTAGGTGAGTCTAAGTGCTTCCTGTCTTTCTCGTTAGCTTGGGGTTTCCA
TGTAACTCCTCCGCATTTCTCCTCCGAAGGAAAGCTATATACAATCTGAC
AGTCCCATCCATACAATCTGACAGTCCCATCCATACAATCTGACAGTCTC
ATCCATACAATCTGACAGTCCCATCCATACAATCTGACAGTCCTATCCAT
ACAATCTGACAGTATTAACTTCCCACGTCGGCTAAATTCAACGAATGGGT
GCGCTCCAGGTTCGACAGCGGGCTCCAACTACTTTGTGCGCATTCTTAGC
ACCTTAGACCGAGAGATTCTCAAGCCCAACACATCAGTAGCTCTCCACCG
CCATAGTCACAGCGTCGTGGAAATACTGCCGCCGGAGAGCGACTCCACCA
TTCAGCTCATGCAAGAAAGGCCGGACGTGACATACCACGACATCGGTGGC
TTGGACATGCAAAAGCAAGAGGTGAGGAAGCTCGAAGTCTGGAGCCGAAC
GTCACGGACGAATATCCCAATGACACACGCGTCGAACCCCCGTCCACCCC
CGCCTTCCGCGCCTTAAGATTTTGGTGGGGTTTTGCGAGCGATTTTTTCC
CGCTAATTTGCGCGGCTTTGGCCCTGTATGATGTCATCATGCGCAGATCA
AGGAGGCCGTGGAGCTCCCGCTAACGCACTTCGAGCTGTACAAACAAATC
GGCATCGACCCCCCAAGAGGTGTCCTTATGTATGGGCCGCCGGGCACGGG
CAAGACCATGATGGCCAAAGCCGTCGCAAACGCGACGAGCGCGTCCTTCA
TCAGCGTAGTGAGTCCGACATGAAGTCATTTGAAGAACACAGACGGTTGG
TGGGTTATTTTTGCCTCCTCGACGCGGTTAAAAAATATCCTCGAGCATTC
TCGAACATCCTCGAGCCTTGGGTCGGGTTTTTTCCGTCTCCCTACCTCGG
ACATGGAGCACCAGACTATTTTTTTAAAGTTAATCCCACAACCGCGTGCG
TGTTAATCAAAACCCAGGTCGGTTCAGAGTTCGTACAGAAGTACCTTGGC
GAAGGGCCTCGCATGGTACGAGATGTGTTTCGCCTTGCTAGGGAGAACTC
TCCCAGCGTGATCTTCATCGACGAGATCGACGCGATCGCAACAAAGCGTT
TCGACGCACAGACCGGCGCCGACCGCGAGGTCCAGCGTATTCTGCTGGAG
CTGCTCAACCAGATGGACGGCTTCGATCAGAGTACCAACGTCAAGGTGTG
TTCCATCTTGCAGAGG
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Coding sequence (CDS) from alignment at H-elongata_contig81362:953..2368+

>mRNA_H-elongata_contig81362.15797.1 ID=mRNA_H-elongata_contig81362.15797.1|Name=mRNA_H-elongata_contig81362.15797.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1554bp|location=Sequence derived from alignment at H-elongata_contig81362:953..2368+ (Himanthalia elongata Himel1 dioecious)
ATGGAATGCGCACAGGAGGAGTACATTAAGGACGAAATGAAGAATCTTAA
GAGAGAGCTCATCCGCGCGAAGGAAGAGATAAAGCGTATACAGTCCGTAC
CGCTCGTGATCGGACAATTCAACGAAATTATCGACGCCAACTACGGCATC
GTAGATGGAATGCGCACAGGAGGAGTACATTAAGGACGAAATGAAGAATC
TTAAGAGAGAGCTCATCCGCGCGAAGGAAGAGATAAAGCGTATACAGTCC
GTACCGCTCGTGATCGGACAATTCAACGAAATTATCGACGCCAACTACGG
CATCGTAGGTTCGACAGCGGGCTCCAACTACTTTGTGCGCATTCTTAGCA
CCTTAGACCGAGAGATTCTCAAGCCCAACACATCAGTAGCTCTCCACCGC
CATAGTCACAGCGTCGTGGAAATACTGCCGCCGGAGAGCGACTCCACCAT
TCAGCTCATGCAAGAAAGGCCGGACGTGACATACCACGACATCGGTGGCT
TGGACATGCAAAAGCAAGAGGTTCGACAGCGGGCTCCAACTACTTTGTGC
GCATTCTTAGCACCTTAGACCGAGAGATTCTCAAGCCCAACACATCAGTA
GCTCTCCACCGCCATAGTCACAGCGTCGTGGAAATACTGCCGCCGGAGAG
CGACTCCACCATTCAGCTCATGCAAGAAAGGCCGGACGTGACATACCACG
ACATCGGTGGCTTGGACATGCAAAAGCAAGAGATCAAGGAGGCCGTGGAG
CTCCCGCTAACGCACTTCGAGCTGTACAAACAAATCGGCATCGACCCCCC
AAGAGGTGTCCTTATGTATGGGCCGCCGGGCACGGGCAAGACCATGATGG
CCAAAGCCGTCGCAAACGCGACGAGCGCGTCCTTCATCAGCGTAATCAAG
GAGGCCGTGGAGCTCCCGCTAACGCACTTCGAGCTGTACAAACAAATCGG
CATCGACCCCCCAAGAGGTGTCCTTATGTATGGGCCGCCGGGCACGGGCA
AGACCATGATGGCCAAAGCCGTCGCAAACGCGACGAGCGCGTCCTTCATC
AGCGTAGTCGGTTCAGAGTTCGTACAGAAGTACCTTGGCGAAGGGCCTCG
CATGGTACGAGATGTGTTTCGCCTTGCTAGGGAGAACTCTCCCAGCGTGA
TCTTCATCGACGAGATCGACGCGATCGCAACAAAGCGTTTCGACGCACAG
ACCGGCGCCGACCGCGAGGTCCAGCGTATTCTGCTGGAGCTGCTCAACCA
GATGGACGGCTTCGATCAGAGTACCAACGTCAAGGTGTGTTCCATCTTGC
AGAGGGTCGGTTCAGAGTTCGTACAGAAGTACCTTGGCGAAGGGCCTCGC
ATGGTACGAGATGTGTTTCGCCTTGCTAGGGAGAACTCTCCCAGCGTGAT
CTTCATCGACGAGATCGACGCGATCGCAACAAAGCGTTTCGACGCACAGA
CCGGCGCCGACCGCGAGGTCCAGCGTATTCTGCTGGAGCTGCTCAACCAG
ATGGACGGCTTCGATCAGAGTACCAACGTCAAGGTGTGTTCCATCTTGCA
GAGG
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