mRNA_H-elongata_contig8124.15784.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8124.15784.1 vs. uniprot
Match: A0A6H5KL23_9PHAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL23_9PHAE) HSP 1 Score: 416 bits (1069), Expect = 3.160e-133 Identity = 274/576 (47.57%), Postives = 346/576 (60.07%), Query Frame = 3
Query: 318 ERLEIRGLRNVGNSCFINAVLQSLASLQSFTNYLEQFFC-LSQRSFRRGELLEFCLMRYADLKP-PATLQPFTHELLELMRSLAPRRATRTLSHSGILSPQRLRSILRDKVGCFGKDDQQDAQELFQMVMRLVGEEAALCLKNRDRRRL--LGSPDAGGAGGFADVLKAKTTQTPEQARAKNPLSGKLAYVRRCTVCDTPSTRMERFVDLSLTLPEARDQHIAYPMPRAKPVDLATILTDFTEEQLVEDFECPTCAVRSAMEAQQDEHGDEGWD--------------VPTKRVRAHMRMLLGEPPQTLCLHFPRRHQSPSGFEMKLEQRVNFPIVLDVTPFCFGGGHHTNSIGV-----ARAAVAN---------IVPTLPGRHGMINKETMSSSSS--AVASPPLAKALRQTPQPRPVVKQALVGGSVDGACGGVTDGSRKELNGLTNGATGARPGGFANRGVRGSDSA--MGSMSGKEG-VEYDLEAVIVHHGSADSDHYTAFRKLECNEIGRPNAET---------------RKEG-------WVDISDEAVNRVTERDVLASQAYMLFYRQ 1868
E+L + G++N+GN+CF+NAVLQSLAS F YLE + +R + + +F L P FT ELL+LM++L P+ S + P +LR++LRD++ FG++DQQDAQELFQMVMRLVGEEAALCLK R +P GGFAD++ + PE NPL G L Y+R C C S R+ERFVDLSLTLPEAR+ H+ P + PV+L IL DFT EQLVED ECP CA+RSAMEA++ H +E VP +RVRA MRMLL PP+TLCLHFPRRH+SPSG EMKL+QRV FP L+V FC+ GG HT+SIGV ++ +AN V T PG G+ + + + + +SPP AKAL Q+PQP P KQALVGGS A SRKELNGL +G+ G+ G + V G + +GS+SG +G +EYDL AVIVH GSADS HYTAFRK++ ++ G+P E RK G WV ISDE V RV+E+ VL+SQAYMLFYRQ
Sbjct: 59 EQLAVPGIKNLGNTCFLNAVLQSLASFHVFREYLEDLHTYMREREHQEHQADKFVFGAEPVLSTKPLESTVFTCELLQLMKNLEPQ--VPPASPVTPIIPTKLRTLLRDRIDTFGREDQQDAQELFQMVMRLVGEEAALCLKKRSTSSTSRTTAPGIRITGGFADLMDTASKNLPE-----NPLLGSLMYLRHCRGCQQKSGRLERFVDLSLTLPEARNPHVVGPGVPSPPVNLEKILEDFTREQLVEDVECPKCAMRSAMEARET-HDEESXXXXXXXXXXXXXXXXVPPQRVRADMRMLLATPPKTLCLHFPRRHRSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTDSIGVPTAFQTKSMLANSLTQLPQGHAVKTTPGAAGLPPEALLPTPRPPPSASSPPQAKAL-QSPQPLPGYKQALVGGSAQEASIAY---SRKELNGLRSGSGGSGGGSSVSGSVEGGRDSNDVGSVSGNDGAMEYDLRAVIVHRGSADSGHYTAFRKVDSDK-GKPVEEEVPAGPEPVSEAPRGERKVGGGCAKKEWVYISDEEVERVSEKRVLSSQAYMLFYRQ 621
BLAST of mRNA_H-elongata_contig8124.15784.1 vs. uniprot
Match: D7G4R1_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R1_ECTSI) HSP 1 Score: 415 bits (1066), Expect = 7.610e-133 Identity = 277/576 (48.09%), Postives = 341/576 (59.20%), Query Frame = 3
Query: 318 ERLEIRGLRNVGNSCFINAVLQSLASLQSFTNYLEQFFCLSQRSFRRGELLEFCLMRYADLKPPATLQPFTHELLELMRSLAPRRATRTLSHSGILSPQRLRSILRDKVGCFGKDDQQDAQELFQMVMRLVGEEAALCLKNRDRRRL--LGSPDAGGAGGFADVLKAKTTQTPEQARAKNPLSGKLAYVRRCTVCDTPSTRMERFVDLSLTLPEARDQHIAYPMPRAKPVDLATILTDFTEEQLVEDFECPTCAVRSAMEAQQ--DEHGD------------EGWDVPTKRVRAHMRMLLGEPPQTLCLHFPRRHQSPSGFEMKLEQRVNFPIVLDVTPFCFGGGHHTNSIGVARA-----AVANIVPTLPGRHGMINKETMSSSS----SAVASP---------PLAKALRQTPQPRPVVKQALVGGSVDGACGGVTDGSRKELNGLTNGATGARPGGFANRGVRGSDSA--MGSMSGKEG-VEYDLEAVIVHHGSADSDHYTAFRKLECNEIGRPNAET---------------RKEG-------WVDISDEAVNRVTERDVLASQAYMLFYRQ 1868
E+L + G++N+GN+CF+NAVLQSLAS F YLE+ + +QR + L P FT ELL+LM+ L P+ +LR +LRD+V FGK+DQQDAQELFQMVMRLVGEEAALC+KNR +P GGFAD++ + + + +NPL G L Y+R C C S R+ERFVDLSLTLPEAR+ H+A P + PV+L IL DFT EQLVED ECP CA+RSAMEA + DE E VP +RVRA MRMLL PP+TLCLHFPRRHQSPSG EMKL+QRV FP L+V FC+ GG HT+SIGV A +AN +P LP H + K T S+ + + +P P AKAL Q+PQ P KQALVGGS A T SRKELNGL +G+ G+ G + V G + +GS+SG +G +EYDL AVIVH GSADS HYTAFRK++ ++ G P E RK G WV ISDE V RV+E+ VL+SQAYMLFYRQ
Sbjct: 55 EQLAVTGIKNLGNTCFLNAVLQSLASFHVFREYLEELYNCNQREXXXXXXSDKVLST-----KPLENTVFTCELLQLMKDLEPQ--VXXXXXXXXXXXXKLRKLLRDRVDTFGKEDQQDAQELFQMVMRLVGEEAALCIKNRSTSSTSRTSAPGIRITGGFADLMDTASKEGVLKNLPENPLLGSLMYLRHCRGCQQKSGRLERFVDLSLTLPEARNPHVAGPGVPSPPVNLDKILEDFTREQLVEDVECPKCAMRSAMEAHETHDEXXXXXXXXXXXXXXXEEVVVPLQRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTDSIGVPTAFQMKSMLANSLPQLPQGHAV--KTTPGSAGLPPEALLPTPXXXXXXXXXPQAKAL-QSPQSLPGYKQALVGGSAQEAS---TAYSRKELNGLRSGSGGSGGGSSVSGSVEGGRDSNDVGSVSGNDGAMEYDLRAVIVHRGSADSGHYTAFRKVDSDK-GEPVEEEVPAGSERVSEAPRGERKGGGGGANKEWVYISDEEVERVSEKRVLSSQAYMLFYRQ 616
BLAST of mRNA_H-elongata_contig8124.15784.1 vs. uniprot
Match: K3WEF4_GLOUD (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEF4_GLOUD) HSP 1 Score: 117 bits (293), Expect = 4.220e-24 Identity = 103/374 (27.54%), Postives = 159/374 (42.51%), Query Frame = 3
Query: 318 ERLEIRGLRNVGNSCFINAVLQSLASLQSFTNYLEQFFCLSQRSFRRGELLEFCLMRYADLKPPATLQPFTHELLELMRSLAPRRATRTLSHSG--ILSPQRLRSILRDKVGCFGKDDQQDAQELFQMVMRLVGEEAALCLKNRDRRRLLGSPDAGGAGGFADVLKAKTTQTPEQARAKNPLSGKLAYVRRCTVCDTPSTRMER-FVDLSLTLPEARDQHIAYPMPRAKPVDLATILTDFTEEQLVEDFECPTCAV-------RSAMEAQQDE-----------------HGDEGW---------------------DVPTKRVRAHMRMLLGEPPQTLCLHFPRR-HQSPSGFEMKLEQRVNFPIVLDVTPFC 1292
+R + G++N+GN+CF NA+LQ+LAS+ SF YL++ ++R + LK PFT+ L + + LAP T+ H ++P+RL + L K+ F + QQD+QEL Q +M LV EE C + R L S D A + + ++ + + NPL G + +CT C F+D+SL+ + + KPV L L +TE + ++ EC C+V R A EA Q + H + W +P H R+ P C HF R+ + + SG KL+ VNFP+ LD++ FC
Sbjct: 19 QRYVVPGIQNLGNTCFFNAILQALASVSSFQEYLDE------------------VVRQSALKAHVRHIPFTNALHDCIEELAP-----TMEHEPRPAVAPRRLNAELVYKLAAFRGNKQQDSQELLQFLMNLVSEEQKRCAVRDNGLRDLTSRDEA-AFMSKSISDVRHDESVKNNKYWNPLHGLQVNLLQCTKCKRYRPMNNHPFLDVSLSFKSDQGK---------KPVTLTDCLRMYTEPEAIQGVECSYCSVLQELRVTRQAFEATQRQIAREKASFDDVELEIAQHERKEWIHTLEKALTSSQVIDLEDFDQHIPRVLQDCHKRLQFSRSPDVFCFHFNRKVYLAWSGSARKLDTHVNFPLELDMSAFC 359
BLAST of mRNA_H-elongata_contig8124.15784.1 vs. uniprot
Match: A0A835Z8G7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G7_9STRA) HSP 1 Score: 113 bits (282), Expect = 4.900e-23 Identity = 118/343 (34.40%), Postives = 152/343 (44.31%), Query Frame = 3
Query: 336 GLRNVGNSCFINAVLQSLASLQSFTNYLEQFFCL----SQRSFRRGELLEFCLMRYAD--LKPPATLQPFTHELLELMRSLAPRRATRTLSHSGILSPQRLRSILRDKVGCFGKDDQQDAQELFQMVMRLVGEEAALCLKNR-------------DRRRLLGSPDAGGAGGFADVLKAKTTQTPEQARAKNPLSGKLAYVRRCTVCDT--PSTRMERFVDLSLTLPEA-------RDQHIAYPMPRAKPVDLATILTDFTEEQLVEDFECPTCAVRSAMEAQQDEHGDEGWDVPTKRVRAHMRML-LGEPPQTLCLHFPRRHQSPSGFEM-KLEQRVNFPIVL 1274
GL N+GN+CF+N+VLQSLASL+ F +YLE S+ SF R LL+ CL + A P++ P E+ E +LR K F DQQDAQE F ++ LV EE + LKNR D R+ +P +GG +L+ P P+ G L RC VC+T P T + F+D+SL LPEA H A A L F +E+ VE EC C R E + E G D +R ++ L L P+ LCLHF RRH SPS M KL QRV FP+ L
Sbjct: 9 GLPNLGNTCFLNSVLQSLASLRHFVSYLEGMRPTVGHASRASFSRT-LLQ-CLSQLAGGAAAAPSSTYPIAREVYE--------------------------GLLR-KAPTFQGRDQQDAQEAFHALVDLVDEER-IQLKNRLGSAYVVPLRSRRDFLRIHPAPPFA-SGGLEALLRPAAAVLPASFFGALPMQGTLCSSLRCVVCNTSKPLT-VAPFIDISLPLPEAYQLYGGGASAHHASSNGFAN--GNGACLRAFMQEEEVEGVECDACTHRRRRERRIQERLRRG-DGEGPELRTFVKRLSLARLPRVLCLHFCRRHYSPSRERMVKLSQRVRFPLEL 316
BLAST of mRNA_H-elongata_contig8124.15784.1 vs. uniprot
Match: A0A4W3IXI7_CALMI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3IXI7_CALMI) HSP 1 Score: 108 bits (269), Expect = 2.560e-21 Identity = 124/516 (24.03%), Postives = 209/516 (40.50%), Query Frame = 3
Query: 330 IRGLRNVGNSCFINAVLQSLASLQSFTNYLEQFFCLSQRSFRRGELLEFCLMRYADLKPPATLQP-FTHELLELMRSLAPRRATRTLSHSGILSPQRLRSILRDKVGCFGKDDQQDAQELFQMVMRLVGEEAALCLKNRDRR-RLLGSPDAGGAGGFADVLKAKTTQTPEQARAKNPLSGKLAYVRRCTVCDTPS-TRMERFVDLSLTLPEARDQHIAYPMPRAKPVDLATILTDFTEEQLVEDFECPTCAVRSAMEAQQDEHGDEGWDVPTKRVRAHMRMLLGEPPQTLCLHFPRRHQSPSGFEMKLEQRVNFPIVLDVTPFCFGGGHHTNSIGVARAAVANIVPTLPGRHGMINKETMSSSSSAVASPPLAKALRQTPQPRPVVKQALVGGSVDGACGGVTDGSRKELNGLTNGATGARPGGFANRGVRGSDSAMGSMSGKEGVEYDLEAVIVHHGSADSDHYTAFRKLECNEIGRPNAETRKEGWVDISDEAVNRVTERDVLASQAYMLFYRQ 1868
+ GL N+GN+CF+N+++Q LA+ SF +LE F C +L P +QP + LL+L++ L+ + +L RL +LR ++QDA ELF ++ + +E RDR+ R+ D +++ P ++++P G+L C CD S R + F LSL++P +P +PV + L F + ++D C C A E G V ++ ++ +G+ PQ LC+H R S G +K + V F +L + + + R A PGRH + + S + S + K RP ++ A + AC S L+ L S + + + + L +V+VHHG S H+ +R+ + P+A + W+ ISD+ V R + ++VLA+ AY+LFY +
Sbjct: 8 VPGLLNLGNTCFMNSLVQGLAACPSFVRWLEDFTA--------------CY----NLDSPEAVQPHLSVTLLQLLKGLSNQGEV----WEDVLDAGRLLEVLRMHKWQISSFEEQDAHELFHVLTSSLEDE-------RDRQPRVAHLFDVRSLEFCLFIVQGPLLPLPNPWKSQHPFHGRLTSNMLCKRCDQQSPVRYDTFDSLSLSIPA---------IPWGRPVTMDHCLQHFISSETIKDVVCEHCTKIRAGETMN------GQTVEKQKTTFVKQLNIGKLPQCLCIHLQRLSWSSQGAPLKRNEHVQFSELLSLDGYKY------------RTASRR-----PGRHRLSRPASTGSFPHTLDSSTVGKL-----GSRPKLQVA------NSAC------SASLLSSLV-----------------ASPALVSACCMPSVYLFRLMSVVVHHGDVHSGHFVTYRRSPASAKTPPSAPGSQ--WLWISDDTVRRASLQEVLAANAYLLFYER 426
BLAST of mRNA_H-elongata_contig8124.15784.1 vs. uniprot
Match: A0A8K1FL91_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL91_PYTOL) HSP 1 Score: 108 bits (270), Expect = 3.180e-21 Identity = 103/380 (27.11%), Postives = 161/380 (42.37%), Query Frame = 3
Query: 288 SGEFRMLRIEERLEIRGLRNVGNSCFINAVLQSLASLQSFTNYLEQFFCLSQRSFRRGELLEFCLMRYADLKPPATLQPFTHELLELMRSLAPRRATRTLSHSGILSPQRLRSILRDKVGCFGKDDQQDAQELFQMVMRLVGEEAALCLKNRDRRR-LLGSPDAGGAGGFADVLKAKTTQTPEQARAKNPLSGKLAYVRRCTVCDT--PSTRMERFVDLSLTLPEARDQHIAYPMPRAKPVDLATILTDFTEEQLVEDFECPTC--------------------AVRSAMEAQQDEH--------------GDEG----WDVPTKRVRA----HMRMLLGEPPQTLCLHFPRRHQSPSGFEMKLEQRVNFPIVLDVTPFC 1292
+G +R +R + GL+N+GN+CF NA+LQ+LA++ SF YL++ + + S RG+ + PFT L + + L P + P+RL L K+ F + QQD+QEL Q ++ +V +E C ++ + L S A +G +D+ + + R NPL G + +C+ C P T RF+D+SL+ +A D KP+ L L +T +++ EC C A AME + + H GD ++ R RA + R+ P C HF R+ SG KL+ V FPI LD++PFC
Sbjct: 13 NGSASHVRPAQRYVVPGLQNLGNTCFFNAILQALAAVGSFPQYLDE---VVEESEERGKHI-----------------PFTRALRDCIHDLTP--VPSEAGSPSAVVPKRLNQELCTKLASFRGNKQQDSQELLQFLINIVNDEQKRCARSDGGLKDLFPSSLAPFSGSISDLC----FEDALEERRWNPLYGLQVDLLQCSGCARYRPMTN-RRFLDVSLSFGDAVDSK--------KPITLWDCLRMYTAPEVISGVECTYCTANQELMLKRRDCKQLELEYATTGAMETELEVHQIKEDIYTLENLLAGDAESLYQLEISDSRCRALRDRYKRLQFSRCPDVFCFHFNRKVFHYSGHARKLDTHVVFPIELDMSPFC 357
BLAST of mRNA_H-elongata_contig8124.15784.1 vs. uniprot
Match: UPI001F5D7148 (ubiquitin carboxyl-terminal hydrolase 27-like n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D7148) HSP 1 Score: 103 bits (257), Expect = 1.910e-19 Identity = 136/548 (24.82%), Postives = 215/548 (39.23%), Query Frame = 3
Query: 336 GLRNVGNSCFINAVLQSLASLQSFTNYLEQFFCLSQRSFRRGELLEFCLMRYADLKPP--ATLQPFTHELLELMRSLAPRRATRTLSHSGILSPQRLRSILRDKVGCFGKDDQQDAQELFQMVMRLVGEEAALCLKNRDRRRLLGSPDAGGAGGFADVLKAKTTQTPEQARAKN----PLSGKLAYVRRCTVCDTP-STRMERFVDLSLT-LPEARDQHIAYPMPRAKPVDLATILTDFTEEQLVEDFECPTCAVRSA-----MEAQQDEH----------------------GDEGWDVPTKRVRAHMRMLLGEPPQTLCLHFPRRHQSPSGFEMKLEQRVNFPIVLDVTPFCFGGGHHTNSIGVARAAVANIVPTLPGRHGMINKETMSSSSSAVASPPLAKALRQTPQPRPVVKQALVGGSVDGACGGVTDGSRKELNGLTNGATGARPGGFANRGVRGSDSAMGSMSGKEGVE-YDLEAVIVHHGSADSDHYTAFRKLECNEIGRPNAETRKEGWVDISDEAVNRVTERDVLASQAYMLFYRQI 1871
GLRN+GN+CF+N +LQ+LAS F + L+ L+ D+ P + P L L+ L+ R R +L+PQ + L V F QQDA E F ++ V +E + C S A + V K + E R K P G + C C + S E F L L+ +P+ I+ L L FT + ++ + C C +A ++++ DE W V +K + ++ + P+ LC+H R S SG +K + ++FP++LD++PF GG + G +A+ + LP H L Q + + GG+ S+ + ++NG + G N GV S S+ S S E Y L AV+ H+G HY A+R++ N R + WV ISD+ V++V+E DVLA++A +LFY ++
Sbjct: 66 GLRNLGNNCFLNVILQALASCDHFVSSLDD------------------LLGSDDVLPEDQSERMPLIFALSSLLEDLSTVRDERI-----VLNPQSVMHALSFYVSHFNLTRQQDASEAFGHLLTSVRDEFSHCYVPYK------SSLADITMFHSKVYKQREGNQSECERWKQNIFGPFDGTIGSTLSCRNCSSVLSLDFENFHCLPLSPVPDINGDIISG-------CSLVDCLKHFTVLEQLDHYRCDHCWHNAAAKYFSLKSEVDEEKVNKLRTCVDYDSCNCKQLFGPDKSTWSVSSKATK---QLAITRCPKILCIHLLRASVSLSGELVKRQGHISFPLLLDLSPFA--GGTFSTGQGPGPSAMNKQIYDLPSLH-----------------------LYQQLNAQMPINTFPTGGNSS---------SQPRKDEVSNGGGCSLYKG--NAGVATSTSSSWSTSFSTRKELYTLSAVVEHYGICGGGHYAAYRRVASNPDANDQVRPRGKHWVYISDDHVSQVSEVDVLAAEATLLFYERL 538
BLAST of mRNA_H-elongata_contig8124.15784.1 vs. uniprot
Match: A0A0C9M0I7_9FUNG (Cysteine proteinase n=1 Tax=Mucor ambiguus TaxID=91626 RepID=A0A0C9M0I7_9FUNG) HSP 1 Score: 101 bits (251), Expect = 1.470e-18 Identity = 94/362 (25.97%), Postives = 148/362 (40.88%), Query Frame = 3
Query: 330 IRGLRNVGNSCFINAVLQSLASLQSFTNYLEQFFCLSQRSFRRGELLEFCLMRYADLKPPATLQPFTHELLELMRSLAPRRATRTLSHSGILSPQRLRSILRDKVGCFGKDDQQDAQELFQMVMRLVGEEAALCLKNRDRRRLLGSPDAGGAGGFADVLKAKTTQTPEQARAKNPLSGKLAYVRRCTVCD-TPSTRMERFVDLSLTLPEARDQHIAYPMPRAKPVDLATILTDFTEEQLVEDFECPTCA-VRSAMEAQ------------------------------------QDEHGDEGWDVPTKRVRAHMRMLLGEPPQTLCLHFPRRHQSPSGFEMKLEQRVNFPIVLDVTPFCFGG 1301
+ GL N+GN+CF+N+VLQSL+SL +YL Q A+ P T LL+ +R L+ + P + ++L ++ QQDAQE++Q+++ + E K + GG D+L ++ + + KNPL G++A R CTVC + + R+E F D+ L LP + L LT T+ ++ED +C C+ V A E + E GD KR ++ M +PP+ LCLHF R + +G +K E +V +P +LD+TP+C G
Sbjct: 118 VAGLINIGNTCFLNSVLQSLSSLPKLQHYLGQL----------------------STAHSASRLPVTQSLLKTLRLLSQ-------PSNNAFKPTDIVNVLGKYRNLLNRE-QQDAQEIYQLLVNELDSETDQLEKKQ--------------GGLRDLLSFGASK--KTTKIKNPLKGRMADKRSCTVCGYSGALRLEDFSDIQLALPTD-----------SASTTLDECLTQLTKVDVMEDVDCMKCSLVNRAQELATKXXXXXXXXXXXXXXXXXXXXXXXXXXHRLNTGDIEREGGDPSIGTMIKRAKSKQSMF-SKPPKVLCLHFVRSVYTDAGETLKNECQVVYPEMLDLTPYCTNG 421
BLAST of mRNA_H-elongata_contig8124.15784.1 vs. uniprot
Match: A0A2D4BI59_PYTIN (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BI59_PYTIN) HSP 1 Score: 100 bits (248), Expect = 2.360e-18 Identity = 141/591 (23.86%), Postives = 208/591 (35.19%), Query Frame = 3
Query: 324 LEIRGLRNVGNSCFINAVLQSLASLQSFTNYLEQFFCLSQRSFRRGELLEFCLMRYADLKPPATLQPFTHELLELMRSLAPRRATRTLSHSGILSPQRLRSILRDKVGCFGKDDQQDAQELFQMVMRLVGEEAALC----------LKNRDRRRLLGSPDAGGAGGFADVLKAKTTQTPE---------------------QARAKNPLSGKLAYVRRCTVCDT--PSTRMERFVDLSLTLPEARDQHIAYPMPRAKPVDLATILTDFTEEQLVEDFECPTCA--------------VRSAMEAQQDEHGDEG----------------WDVP--------TKRVRA----HMRMLLGEPPQTLCLHFPRR-HQSPSGFEMKLEQRVNFPIVLDVTPFCFGGGHHTNSIGVARAAVANIVPTLPGRHGMINKETMSSSSSAVASPPLAKALRQTPQPRPVVKQALVGGSVDGACGGVTDGSRKELNGLTNGATGARPGGFANRGVRGSDSAMGSMSGKEGVEYDLEAVIVHHGSADSDHYTAFRKLECNEIGRPNAETRKEGWVDISDEAVNRVTERDVLASQAYMLFYRQ 1868
+ + GL+N+GN+CF NA+LQ LAS+ SF +YL +++ + L+ PFT L + + LAP T S + P+ L L +++ F + QQDAQEL Q ++ LVG E C L R + SP G + + +P + + +P+ G + +C+ C P T RFVD+SL+L +D + + L L +T + + EC C ++ A++ D+ E D P T R RA RM P LC HF R+ + SG KL+ V FPI LD++PFC E S+ S++ A PL L +P P P + Y+L AVI+HHGS S H+TAFR++ ++ W ISD V +E +VL S AYMLFY +
Sbjct: 10 MAVPGLQNLGNTCFFNAILQGLASVDSFRDYLAHVVADARQVGGKARLV-----------------PFTQALFDCITDLAP---TADDSRCSTVVPRELNDELCNRLALFRGNKQQDAQELLQFLVGLVGYEHKRCTGGDRGLIDLLATRPMYGAMRSPTPTDDDGSDTSVSSSLDGSPNGSFHGASVSSSISDLRFESAMETKRWSPMHGLQVDLLQCSNCGNYRPMTN-RRFVDVSLSL---QDFATSSSASSTSSISLWDCLRRYTAPEYLSGVECSFCTATRELAMKRKECEQLQRALQKDPDDIAVELEVHQLKDDIHQLDHLLQDDPSALHQFLRTARCRALCDYTKRMQFSRCPDVLCFHFNRKVFHAWSGNTRKLDTHVAFPIELDMSPFC-------------------------------RFEQPSNRSTSEAPAPL---LGISPPPAPHLL------------------------------------------------------------YELTAVILHHGSDRSGHFTAFRRVRSSQQ-----------WFFISDATVRDASEDEVLRSCAYMLFYER 471
BLAST of mRNA_H-elongata_contig8124.15784.1 vs. uniprot
Match: A0A168NYX9_MUCCL (USP domain-containing protein n=2 Tax=Mucor circinelloides f. lusitanicus TaxID=29924 RepID=A0A168NYX9_MUCCL) HSP 1 Score: 100 bits (249), Expect = 2.580e-18 Identity = 96/374 (25.67%), Postives = 153/374 (40.91%), Query Frame = 3
Query: 303 MLRIEERLEIRGLRNVGNSCFINAVLQSLASLQSFTNYLEQFFCLSQRSFRRGELLEFCLMRYADLKPPATLQPFTHELLELMRSLAPRRATRTLSHSGILSPQRLRSILRDKVGCFGKDDQQDAQELFQMVMRLVGEEAALCLKNRDRRRLLGSPDAGGAGGFADVLKAKTTQTPEQARAKNPLSGKLAYVRRCTVCD-TPSTRMERFVDLSLTLPEARDQHIAYPMPRAKPVDLATILTDFTEEQLVEDFECPTCAV-------------------RSAMEAQQDEH-----------GD---EGWDVPTK---RVRAHMRMLLGEPPQTLCLHFPRRHQSPSGFEMKLEQRVNFPIVLDVTPFCFGGGHHT 1313
+L+ L + GL N+GN+CF+N+VLQSL+SL +YL+Q K A+ P T LL+ +R L+ + P + ++L K+ QQDAQE++Q+++ + E K + GG D+L ++ ++ K+PL G + R CT C T R+E F D+ L LP A L L T+ + +E +C C++ R + E Q+ + GD EG D K R + ++ +PP+ LC HF R + +G +K E +V +P +LD+TP+C G T
Sbjct: 108 LLQESSSLMVAGLINIGNTCFLNSVLQSLSSLPKLQHYLDQ----------------------VSSKHSASRLPVTQSLLKTLRLLSQ-------PSNNAFKPTDIVNVLGKHRNILNKE-QQDAQEIYQLLVNELEAETDQLAKKQ--------------GGLKDLLSFGASKKTDEI--KSPLRGSITDRRSCTACGYTGPLRLENFTDIHLALPTD-----------AASTTLDECLAQLTKVEEMEGVDCAKCSLVNRVEELATEIKVLKQKGQRKSKEVQRKQSLKAEIERRLNIGDIEREGGDTAIKTMVRRSKSKQAMISKPPKVLCFHFVRSVYTNAGEAIKNECQVVYPELLDLTPYCTNGSLKT 424 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8124.15784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8124.15784.1 >prot_H-elongata_contig8124.15784.1 ID=prot_H-elongata_contig8124.15784.1|Name=mRNA_H-elongata_contig8124.15784.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=581bp MSASRLTVASATTATVGLVLAANLLRKTRQGQGRRGHAGLRAASGEFRMLback to top mRNA from alignment at H-elongata_contig8124:727..6146+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8124.15784.1 ID=mRNA_H-elongata_contig8124.15784.1|Name=mRNA_H-elongata_contig8124.15784.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5420bp|location=Sequence derived from alignment at H-elongata_contig8124:727..6146+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8124:727..6146+ >mRNA_H-elongata_contig8124.15784.1 ID=mRNA_H-elongata_contig8124.15784.1|Name=mRNA_H-elongata_contig8124.15784.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3486bp|location=Sequence derived from alignment at H-elongata_contig8124:727..6146+ (Himanthalia elongata Himel1 dioecious)back to top |