mRNA_H-elongata_contig81195.15776.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig81195.15776.1
Unique NamemRNA_H-elongata_contig81195.15776.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig81195.15776.1 vs. uniprot
Match: D8LEE8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE8_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 2.270e-70
Identity = 114/157 (72.61%), Postives = 134/157 (85.35%), Query Frame = 1
Query:  109 GGAAKIHVEGMSVTPLKDFVNAGMPPEVMRYVTLRKWKEPTPIQAYCWPVLNAGRDVVGVAETGSGKTLAFSLPAMARIVKRAKVMMPRENEGPFMLVLAPTRELALQSAEVIAEAGKHCGVRSACVYGGVPKREQRKALGG-EGRSCVQVVVATPG 576
            G  +K+H+EGM VTPLKDF ++GMP EVM+YVTLR W +PT IQA+CWPVLNAGRDV+G+AETGSGKTL FSLPAM++I K  K    +++EGP+MLVLAPTRELALQSAEVIAEAG HCG++S CVYGGVPKR+Q+ ALGG  G  CVQVVVATPG
Sbjct:  144 GAGSKVHIEGMKVTPLKDFASSGMPAEVMKYVTLRGWDKPTLIQAHCWPVLNAGRDVIGIAETGSGKTLGFSLPAMSKIFKNMKA--GKKSEGPYMLVLAPTRELALQSAEVIAEAGGHCGIKSVCVYGGVPKRDQKIALGGGRGGGCVQVVVATPG 298          
BLAST of mRNA_H-elongata_contig81195.15776.1 vs. uniprot
Match: A0A835YU16_9STRA (DEAD box RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU16_9STRA)

HSP 1 Score: 174 bits (441), Expect = 9.270e-48
Identity = 94/154 (61.04%), Postives = 111/154 (72.08%), Query Frame = 1
Query:  115 AAKIHVEGMSVTPLKDFVNAGMPPEVMRYVTLRKWKEPTPIQAYCWPVLNAGRDVVGVAETGSGKTLAFSLPAMARIVKRAKVMMPRENEGPFMLVLAPTRELALQSAEVIAEAGKHCGVRSACVYGGVPKREQRKALGGEGRSCVQVVVATPG 576
            AA I VEGM VTPL DF  AG P +++ YV  +K++ PTPIQ+YCWPVL AGRD+VG+AETGSGKTLAF LP + R++ +           P MLVLAPTRELA+QSAEVIA AG   GV  ACVYGGVPK EQ++AL    RS  + VVATPG
Sbjct:  187 AAPITVEGMDVTPLADFDGAGFPAKLLAYVLAQKFERPTPIQSYCWPVLGAGRDIVGIAETGSGKTLAFGLPGLTRVLAQKGGSGGXXGARPEMLVLAPTRELAIQSAEVIAAAGAAAGVACACVYGGVPKGEQKRAL----RSA-RAVVATPG 335          
BLAST of mRNA_H-elongata_contig81195.15776.1 vs. uniprot
Match: A0A2P4XH48_9STRA (DEAD/DEAH box RNA helicase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XH48_9STRA)

HSP 1 Score: 147 bits (372), Expect = 3.310e-40
Identity = 72/124 (58.06%), Postives = 96/124 (77.42%), Query Frame = 1
Query:  205 TLRKWKEPTPIQAYCWPVLNAGRDVVGVAETGSGKTLAFSLPAMARIVKRAKVMMPRENEGPFMLVLAPTRELALQSAEVIAEAGKHCGVRSACVYGGVPKREQRKALGGEGRSCVQVVVATPG 576
            T + + +PTPIQ+ CWP+L +GRD++G+AETGSGKTLAFS+P +  I  + +V    ++ GP MLV+APTRELA+QS+ VI+EAGK CG++S C+YGGVPK+ Q+KAL    R  V VVVATPG
Sbjct:  149 TTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGLIHIAAQPEVS--HKHPGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKQTQKKAL----RDGVHVVVATPG 266          
BLAST of mRNA_H-elongata_contig81195.15776.1 vs. uniprot
Match: H3G5S8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5S8_PHYRM)

HSP 1 Score: 147 bits (371), Expect = 4.510e-39
Identity = 72/118 (61.02%), Postives = 93/118 (78.81%), Query Frame = 1
Query:  223 EPTPIQAYCWPVLNAGRDVVGVAETGSGKTLAFSLPAMARIVKRAKVMMPRENEGPFMLVLAPTRELALQSAEVIAEAGKHCGVRSACVYGGVPKREQRKALGGEGRSCVQVVVATPG 576
            +PTPIQ+ CWP+L +GRD++G+AETGSGKTLAFS+P M  I  + +V +  ++ GP MLV+APTRELA+QS+ VI+EAGK CG++S C+YGGVPK  Q+KAL    R  V VVVATPG
Sbjct:   25 KPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGMIHIAAQPEVSL--KHPGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKHTQKKAL----RDGVHVVVATPG 136          
BLAST of mRNA_H-elongata_contig81195.15776.1 vs. uniprot
Match: A0A484DY05_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DY05_BRELC)

HSP 1 Score: 149 bits (376), Expect = 6.190e-39
Identity = 75/142 (52.82%), Postives = 103/142 (72.54%), Query Frame = 1
Query:  151 PLKDFVNAGMPPEVMRYVTLRKWKEPTPIQAYCWPVLNAGRDVVGVAETGSGKTLAFSLPAMARIVKRAKVMMPRENEGPFMLVLAPTRELALQSAEVIAEAGKHCGVRSACVYGGVPKREQRKALGGEGRSCVQVVVATPG 576
            P+  F +    P+ M+  T + + +PTPIQ+ CWP+L +GRD++G+AETGSGKTLAF++P +  I  ++ V    ++ GP MLV+APTRELA+QS+ VI+EAGK CG++S C+YGGVPK  Q+KAL    R  V VVVATPG
Sbjct:  137 PVLSFKDISFEPKFMK--TTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFAIPGLIHIAAQSGVS--PKHPGPLMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKHTQKKAL----RDGVHVVVATPG 270          
BLAST of mRNA_H-elongata_contig81195.15776.1 vs. uniprot
Match: A0A5D6YE84_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE84_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.050e-38
Identity = 75/142 (52.82%), Postives = 102/142 (71.83%), Query Frame = 1
Query:  151 PLKDFVNAGMPPEVMRYVTLRKWKEPTPIQAYCWPVLNAGRDVVGVAETGSGKTLAFSLPAMARIVKRAKVMMPRENEGPFMLVLAPTRELALQSAEVIAEAGKHCGVRSACVYGGVPKREQRKALGGEGRSCVQVVVATPG 576
            P++ F +     + ++  T   + +PTPIQ+ CWP+L +GRD++G+AETGSGKTLAFS+P +  I   A+  +  +  GP MLV+APTRELA+QS+EVI +AGK CG+RS C+YGGVPK EQ+K L    R+ V VVVATPG
Sbjct:  156 PIRSFADVTFDAKFLK--TTAGFSKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGLIHIA--AQPALSPKFSGPRMLVVAPTRELAMQSSEVITQAGKQCGLRSTCIYGGVPKHEQKKIL----RNGVHVVVATPG 289          
BLAST of mRNA_H-elongata_contig81195.15776.1 vs. uniprot
Match: UPI000C784A6A (DEAD-box ATP-dependent RNA helicase 5-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C784A6A)

HSP 1 Score: 147 bits (370), Expect = 3.390e-38
Identity = 76/142 (53.52%), Postives = 98/142 (69.01%), Query Frame = 1
Query:  151 PLKDFVNAGMPPEVMRYVTLRKWKEPTPIQAYCWPVLNAGRDVVGVAETGSGKTLAFSLPAMARIVKRAKVMMPRENEGPFMLVLAPTRELALQSAEVIAEAGKHCGVRSACVYGGVPKREQRKALGGEGRSCVQVVVATPG 576
            P+  F   G    +M+  +  K+  PTPIQA CWPVL +GRD++G+AETGSGKTLAF++PA+A I +R     P + +GP ML++APTRELA+QS EV+ EA     +RS CVYGGVPK  QR  L    +S V+VVVATPG
Sbjct:  112 PILTFPELGFSKSIMKICS--KFDRPTPIQAQCWPVLGSGRDIIGIAETGSGKTLAFTIPALAHIKERMSTE-PGKKKGPMMLIIAPTRELAMQSQEVLEEASNIVKIRSICVYGGVPKHSQRHGL----KSGVEVVVATPG 246          
BLAST of mRNA_H-elongata_contig81195.15776.1 vs. uniprot
Match: A0A0P1AQT8_PLAHL (Dead box rna helicase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQT8_PLAHL)

HSP 1 Score: 147 bits (371), Expect = 3.530e-38
Identity = 70/124 (56.45%), Postives = 97/124 (78.23%), Query Frame = 1
Query:  205 TLRKWKEPTPIQAYCWPVLNAGRDVVGVAETGSGKTLAFSLPAMARIVKRAKVMMPRENEGPFMLVLAPTRELALQSAEVIAEAGKHCGVRSACVYGGVPKREQRKALGGEGRSCVQVVVATPG 576
            T + + +PTPIQ+ CWP+L +GRD++G+AETGSGKTLAF++P +  I  + +V    ++ GP MLV+APTRELA+QS+ VI+EAGK+CG++S C+YGGVPK+ Q+KAL    R  + VVVATPG
Sbjct:  162 TTKDFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFAIPGLIHIAAQPEVS--HKHPGPRMLVVAPTRELAMQSSAVISEAGKNCGLKSICIYGGVPKQAQKKAL----RDGIHVVVATPG 279          
BLAST of mRNA_H-elongata_contig81195.15776.1 vs. uniprot
Match: D0MT79_PHYIT (DEAD/DEAH box RNA helicase, putative n=19 Tax=Phytophthora TaxID=4783 RepID=D0MT79_PHYIT)

HSP 1 Score: 147 bits (371), Expect = 3.600e-38
Identity = 72/124 (58.06%), Postives = 95/124 (76.61%), Query Frame = 1
Query:  205 TLRKWKEPTPIQAYCWPVLNAGRDVVGVAETGSGKTLAFSLPAMARIVKRAKVMMPRENEGPFMLVLAPTRELALQSAEVIAEAGKHCGVRSACVYGGVPKREQRKALGGEGRSCVQVVVATPG 576
            T + + +PTPIQ+ CWP+L +GRD++G+AETGSGKTLAFS+P +  I  + +V    ++ GP MLV+APTRELA+QS+ VI+EAGK CG++S C+YGGVPK  Q+KAL    R  V VVVATPG
Sbjct:  164 TTKGFDKPTPIQSQCWPILASGRDIIGIAETGSGKTLAFSIPGLIHIAAQPEVS--HKHPGPRMLVVAPTRELAMQSSAVISEAGKKCGLKSICIYGGVPKHTQKKAL----RDGVHVVVATPG 281          
BLAST of mRNA_H-elongata_contig81195.15776.1 vs. uniprot
Match: A0A7S3XUU1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUU1_HETAK)

HSP 1 Score: 146 bits (369), Expect = 7.610e-38
Identity = 81/144 (56.25%), Postives = 97/144 (67.36%), Query Frame = 1
Query:  151 PLKDFVNAGMPPEVMRYVTLRKWKEPTPIQAYCWPVLNAGRDVVGVAETGSGKTLAFSLPAMARIVKR--AKVMMPRENEGPFMLVLAPTRELALQSAEVIAEAGKHCGVRSACVYGGVPKREQRKALGGEGRSCVQVVVATPG 576
            P + F  AG PPEV+       +  PTPIQA CWP+L+AGRD++GVAETGSGKTLAFSLPA+ARI +       + R+  GP MLV+ PTRELA Q A VI  AG   G+RS CVYGGVPK EQ++ L    +    VVVATPG
Sbjct:  144 PHQTFGEAGFPPEVLG--GCEGFTAPTPIQAQCWPILSAGRDLIGVAETGSGKTLAFSLPALARIHRELGGGKALSRQRPGPLMLVICPTRELAQQCAAVIETAGAGAGLRSVCVYGGVPKHEQKRKLQ-NAQGGAHVVVATPG 284          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81195.15776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEE8_ECTSI2.270e-7072.61DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YU16_9STRA9.270e-4861.04DEAD box RNA helicase n=1 Tax=Tribonema minus TaxI... [more]
A0A2P4XH48_9STRA3.310e-4058.06DEAD/DEAH box RNA helicase (Fragment) n=1 Tax=Phyt... [more]
H3G5S8_PHYRM4.510e-3961.02Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A484DY05_BRELC6.190e-3952.82Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A5D6YE84_9STRA1.050e-3852.82Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
UPI000C784A6A3.390e-3853.52DEAD-box ATP-dependent RNA helicase 5-like n=1 Tax... [more]
A0A0P1AQT8_PLAHL3.530e-3856.45Dead box rna helicase n=1 Tax=Plasmopara halstedii... [more]
D0MT79_PHYIT3.600e-3858.06DEAD/DEAH box RNA helicase, putative n=19 Tax=Phyt... [more]
A0A7S3XUU1_HETAK7.610e-3856.25Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81195contigH-elongata_contig81195:2..1510 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score236.9
Seed ortholog evalue7.9e-60
Seed eggNOG ortholog2880.D8LEE8
Preferred nameDBP3
KEGG koko:K07466,ko:K14811
KEGG Pathwayko03030,ko03420,ko03430,ko03440,ko03460,map03030,map03420,map03430,map03440,map03460
KEGG ModuleM00288
GOsGO:0000027,GO:0000166,GO:0000460,GO:0000463,GO:0000464,GO:0000466,GO:0000469,GO:0000470,GO:0000478,GO:0000479,GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010467,GO:0010501,GO:0016043,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070013,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0331@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03000,ko03009,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-00_002030.1
Exons2
Model size576
Cds size576
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931218.6471107-CDS-H-elongata_contig81195:1..2061622931218.6471107-CDS-H-elongata_contig81195:1..206Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81195 2..206 -
1691679746.4850128-CDS-H-elongata_contig81195:1..2061691679746.4850128-CDS-H-elongata_contig81195:1..206Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81195 2..206 -
1622931218.665723-CDS-H-elongata_contig81195:1139..15101622931218.665723-CDS-H-elongata_contig81195:1139..1510Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81195 1140..1510 -
1691679746.5016413-CDS-H-elongata_contig81195:1139..15101691679746.5016413-CDS-H-elongata_contig81195:1139..1510Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81195 1140..1510 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81195.15776.1prot_H-elongata_contig81195.15776.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig81195 2..1510 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig81195.15776.1

>prot_H-elongata_contig81195.15776.1 ID=prot_H-elongata_contig81195.15776.1|Name=mRNA_H-elongata_contig81195.15776.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp
GKSKKKKKKKKEGGKASASETPVDVAGSKAEAEAVSGGAAKIHVEGMSVT
PLKDFVNAGMPPEVMRYVTLRKWKEPTPIQAYCWPVLNAGRDVVGVAETG
SGKTLAFSLPAMARIVKRAKVMMPRENEGPFMLVLAPTRELALQSAEVIA
EAGKHCGVRSACVYGGVPKREQRKALGGEGRSCVQVVVATPG
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mRNA from alignment at H-elongata_contig81195:2..1510-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig81195.15776.1 ID=mRNA_H-elongata_contig81195.15776.1|Name=mRNA_H-elongata_contig81195.15776.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1509bp|location=Sequence derived from alignment at H-elongata_contig81195:2..1510- (Himanthalia elongata Himel1 dioecious)
GGCAAGAGCAAAAAGAAAAAGAAGAAAAAGAAGGAGGGGGGAAAAGCTTC CGCTAGCGAAACCCCCGTGGATGTCGCGGGGTCGAAGGCCGAGGCGGAGG CTGTCTCCGGAGGTGCGGCCAAGATCCACGTGGAAGGGATGAGCGTGACG CCCTTGAAGGACTTCGTCAACGCGGGCATGCCCCCCGAGGTGATGCGGTA CGTGACCCTGAGGAAGTGGAAGGAGCCGACGCCGATCCAGGCCTATTGCT GGCCGGTGCTCAACGCCGGGCGCGATGTGGTCGGCGTCGCGGAGACGGGG TCAGGGAAGACCCTCGCCTTCAGCCTGCCCGCAATGGCGCGCATCGTCAA GCGCGCAAAGGTGATGATGCCGTCTCCTGAGACGGCGGAGTAGGATTCGG CGCGGTGGCGTGGTTTGGAGTTTTATGATTTTGCCTTGGTGAACGTTCTG GCCTGAAGAATCGTGAGCTTATTTGTGGTAGCTGTCCAGCTACTGTTCTA TGGTATCCCATGGAACAAGGAAGGCCAGAACCCGAACAAAGCGCGAAAAT ATTTCGCGATGGTGACTTCGCGAGTTCGAGTCCCGCTCGACGAGTCTTTT GTTTTTTTAGTGTCTTGTGTGTAAAGGAGACTGATGCATGCTAGAGTGCC GAAGGCATCGCTTTCATTCGCTTTCGATATGCCCCCCCCCCCAGGTTAGC ATGGGTTAGAGTCCTTGCAGGTGAAACACATGATATCCTTATTGTATATA GTGCCTACTGAACAAATTATGATTAGAGAGGCCTCGAGCAAACCACAAAC TTATGAGAGTCTTCCGCCCAAGAGTCTCTTTTGAGAAGGTTGTAGTCCGA GCGTATCACACAGACGTGCGTGCGGCGCTTTTGCGTTTTTGAAGTATCAA AGTCCTTTTTGCGGTACTCGATGATAAGTTGCGCTCGCCGAATGTGCAGC ATTTTGTGGCCCGATGTGTCGAATTAACCCATTAGACTATCTATAACCAA AACCATGTCCCATGTCCTGTCATGTCCGGTTTGGTTTAGCAAACGTGAGG ATAGTGAAAAAAACTGCTATCATCCTAGTGAAACGCAGCGTGGCCGGCGA AAAACCGGTATGCTACCATATCGTTCCGTTTCGTTCCATTCGGTTCCGGC ATTGGTGCCATGTGTGTAGTCTGGTATATGCCATGCGTCTGTTTGGATAC CACGAGCGTTCAATATATCTACTGTACTGTAGATCAACTCTCGTTCTTTT CCACCCATTTCCCCATATATATATATATATTACCTTATGTATTATCTGAA AGAGGCGGGAGAACGAAGGGCCGTTCATGCTGGTGCTTGCTCCCACGCGA GAGCTTGCCCTGCAGAGCGCGGAGGTGATCGCGGAGGCCGGCAAGCACTG TGGCGTGCGGAGCGCGTGCGTGTATGGAGGCGTGCCGAAGCGGGAGCAGA GGAAGGCGCTCGGGGGCGAGGGTAGAAGCTGCGTGCAGGTCGTGGTGGCG ACCCCCGGT
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Coding sequence (CDS) from alignment at H-elongata_contig81195:2..1510-

>mRNA_H-elongata_contig81195.15776.1 ID=mRNA_H-elongata_contig81195.15776.1|Name=mRNA_H-elongata_contig81195.15776.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1152bp|location=Sequence derived from alignment at H-elongata_contig81195:2..1510- (Himanthalia elongata Himel1 dioecious)
GGCAAGAGCAAAAAGAAAAAGAAGAAAAAGAAGGAGGGGGGAAAAGCTTC
CGCTAGCGAAACCCCCGTGGATGTCGCGGGGTCGAAGGCCGAGGCGGAGG
CTGTCTCCGGAGGTGCGGCCAAGATCCACGTGGAAGGGATGAGCGTGACG
CCCTTGAAGGACTTCGTCAACGCGGGCATGCCCCCCGAGGTGATGCGGTA
CGTGACCCTGAGGAAGTGGAAGGAGCCGACGCCGATCCAGGCCTATTGCT
GGCCGGTGCTCAACGCCGGGCGCGATGTGGTCGGCGTCGCGGAGACGGGG
TCAGGGAAGACCCTCGCCTTCAGCCTGCCCGCAATGGCGCGCATCGTCAA
GCGCGCAAAGGTGATGATGCCGGCAAGAGCAAAAAGAAAAAGAAGAAAAA
GAAGGAGGGGGGAAAAGCTTCCGCTAGCGAAACCCCCGTGGATGTCGCGG
GGTCGAAGGCCGAGGCGGAGGCTGTCTCCGGAGGTGCGGCCAAGATCCAC
GTGGAAGGGATGAGCGTGACGCCCTTGAAGGACTTCGTCAACGCGGGCAT
GCCCCCCGAGGTGATGCGGTACGTGACCCTGAGGAAGTGGAAGGAGCCGA
CGCCGATCCAGGCCTATTGCTGGCCGGTGCTCAACGCCGGGCGCGATGTG
GTCGGCGTCGCGGAGACGGGGTCAGGGAAGACCCTCGCCTTCAGCCTGCC
CGCAATGGCGCGCATCGTCAAGCGCGCAAAGGTGATGATGCCGCGGGAGA
ACGAAGGGCCGTTCATGCTGGTGCTTGCTCCCACGCGAGAGCTTGCCCTG
CAGAGCGCGGAGGTGATCGCGGAGGCCGGCAAGCACTGTGGCGTGCGGAG
CGCGTGCGTGTATGGAGGCGTGCCGAAGCGGGAGCAGAGGAAGGCGCTCG
GGGGCGAGGGTAGAAGCTGCGTGCAGGTCGTGGTGGCGACCCCCGGTGCG
GGAGAACGAAGGGCCGTTCATGCTGGTGCTTGCTCCCACGCGAGAGCTTG
CCCTGCAGAGCGCGGAGGTGATCGCGGAGGCCGGCAAGCACTGTGGCGTG
CGGAGCGCGTGCGTGTATGGAGGCGTGCCGAAGCGGGAGCAGAGGAAGGC
GCTCGGGGGCGAGGGTAGAAGCTGCGTGCAGGTCGTGGTGGCGACCCCCG
GT
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