mRNA_H-elongata_contig80924.15748.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig80924.15748.1
Unique NamemRNA_H-elongata_contig80924.15748.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: D8LJ89_ECTSI (Amidophosphoribosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ89_ECTSI)

HSP 1 Score: 328 bits (840), Expect = 1.280e-107
Identity = 163/201 (81.09%), Postives = 174/201 (86.57%), Query Frame = 1
Query:    1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCAY 603
            DSELLINVFAKELT HDK+PQDV P+D+FDA  GVISRCEGGYAVV MINGIGIVGFRDP  IRPLVFGTR K  A GT  D+V+SSESVVMDMLGF+L RDV PGECVFVDVKG IHTHQC +P+ A LSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLA RI+EKYPDH IDVV+PIP      DTARTSA+QCAY
Sbjct:  132 DSELLINVFAKELTNHDKRPQDVTPEDIFDAVGGVISRCEGGYAVVVMINGIGIVGFRDPNGIRPLVFGTREKTKAGGTTKDYVVSSESVVMDMLGFKLNRDVAPGECVFVDVKGNIHTHQCQLPDGASLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAKRIREKYPDHDIDVVLPIP------DTARTSALQCAY 326          
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A0A3B0XQU3_9ZZZZ (Amidophosphoribosyltransferase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0XQU3_9ZZZZ)

HSP 1 Score: 226 bits (575), Expect = 2.770e-68
Identity = 118/200 (59.00%), Postives = 149/200 (74.50%), Query Frame = 1
Query:    1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCA 600
            DSE+L+NVFA EL    K    +  K+VF A  GV  RC+GGYAVV MI G GIVGFRDP+ IRP+VFG R  +T +GT  D++++SESV +DM+GF LIRD+ PGE VF+D+KG IHT QC   EK   +PCLFE+VYFARPDS++D + VY+ARL MG KLA RI++++P+H IDVVIPIP      DT+RTSA+Q A
Sbjct:  127 DSEILLNVFAHELGCQKKYT--ITEKEVFSAVAGVHRRCKGGYAVVTMIAGQGIVGFRDPHGIRPVVFGKR--ITEQGT--DYMIASESVALDMVGFELIRDIEPGEAVFIDLKGNIHTMQCA--EKVEYAPCLFEFVYFARPDSIIDNISVYKARLRMGEKLAARIRKEHPEHDIDVVIPIP------DTSRTSALQLA 312          
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A0A4D9D0B8_9STRA (Amidophosphoribosyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0B8_9STRA)

HSP 1 Score: 220 bits (560), Expect = 2.400e-65
Identity = 109/201 (54.23%), Postives = 140/201 (69.65%), Query Frame = 1
Query:    1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCAY 603
            DSEL++NVFA+EL    K  +D+ P DVF+A   +++RC G Y VV ++NG+G++GFRDP+ IRPLV GTRN  T  G + D +L+SESV +D L F L+ DVGPGE + +  +G +H  QC       L PC+FEYVYFARPDS++D V VYEARLNMG +LA  I  KYP H IDVVIP+P      DT+RTS + CAY
Sbjct:  129 DSELVLNVFAEELQAQHKG-RDICPTDVFEAVRKLMARCHGAYGVVMLVNGVGLLGFRDPHGIRPLVLGTRNSTTQAG-VTDFLLASESVAIDTLRFSLVGDVGPGEAILITTEGKLHRSQCA--RSPQLMPCIFEYVYFARPDSIMDGVQVYEARLNMGERLAESILRKYPQHDIDVVIPVP------DTSRTSGLSCAY 319          
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A0A6N1DUE2_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Ectothiorhodospiraceae bacterium 2226 TaxID=2740164 RepID=A0A6N1DUE2_9GAMM)

HSP 1 Score: 216 bits (551), Expect = 9.180e-65
Identity = 116/201 (57.71%), Postives = 142/201 (70.65%), Query Frame = 1
Query:    1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCAY 603
            DSE+L+NVFA EL    K   D    DVF+A  GV  RC GGYA VAMI G GIVGFRDP+ IRP+VFG R   T +G   ++V++SESV +D LGF L+RD+ PGE VF+D +G +HT QC   E  M SPC+FEYVYFARPDS++D V VY+ARL MG +LA +I   +PDH IDVVIPIP      DT+RTSA+Q +Y
Sbjct:  127 DSEILLNVFAHELGVGGKLRID--ENDVFNAVAGVHRRCRGGYAAVAMIAGYGIVGFRDPHGIRPIVFGKRE--TEQGA--EYVIASESVAIDALGFELVRDLEPGEAVFIDHEGNLHTRQCA--ENPMYSPCIFEYVYFARPDSIIDGVSVYKARLRMGDRLAAKILRDWPDHDIDVVIPIP------DTSRTSALQLSY 313          
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: Q1N6Q0_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Bermanella marisrubri TaxID=207949 RepID=Q1N6Q0_9GAMM)

HSP 1 Score: 216 bits (549), Expect = 1.900e-64
Identity = 112/200 (56.00%), Postives = 148/200 (74.00%), Query Frame = 1
Query:    1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCA 600
            DSE+L+NVFA EL  H+++      +DVFDA E V  R +GGYAV+AMI GIG+VGFRDPY IRP VFG R   T +GT  +++++SESV +D LGF++IRD+ PGE V++DV G +HT QC   E  +  PC+FE+VYFARPDS++DK+ VY+ARL MGA+LA +I  + PDH IDVVIPIP      DT+R+SA++ A
Sbjct:  127 DSEVLLNVFAHEL--HEQKKLKPTQEDVFDAVERVHKRVKGGYAVIAMIAGIGVVGFRDPYGIRPAVFGKRE--TEKGT--EYMIASESVALDALGFKVIRDIEPGEAVYIDVDGNLHTRQCA--ENPVYRPCIFEHVYFARPDSIIDKISVYKARLKMGARLAEKILRERPDHDIDVVIPIP------DTSRSSALELA 312          
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A0A661D1I3_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661D1I3_9GAMM)

HSP 1 Score: 215 bits (547), Expect = 3.690e-64
Identity = 110/201 (54.73%), Postives = 141/201 (70.15%), Query Frame = 1
Query:    1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCAY 603
            DSE+L+N+FA EL  H      +  KD+F+A +GV  RC GGYAVVAMI G+G+V FRDPY IRP+VFG RN  T  GT  ++V++SESV +D+LGF L+RD+ PGE +F+   G ++T QC   +   LSPC+FE VY ARPDS++D + VY+ARL MG  LA +I   YP H IDVVIPIP      DT+RT+AVQ AY
Sbjct:  127 DSEILLNIFAHEL--HKLHKLQINQKDIFEAVKGVHKRCRGGYAVVAMITGVGLVAFRDPYGIRPVVFGKRN--TTAGT--EYVVASESVAIDVLGFELVRDIAPGEAIFITADGQLYTRQCA--DNPQLSPCIFEIVYMARPDSIMDGISVYKARLRMGKLLAKKILRLYPKHDIDVVIPIP------DTSRTAAVQLAY 313          
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A0A661DZ81_9GAMM (Amidophosphoribosyltransferase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661DZ81_9GAMM)

HSP 1 Score: 212 bits (539), Expect = 4.710e-64
Identity = 111/200 (55.50%), Postives = 142/200 (71.00%), Query Frame = 1
Query:    1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCA 600
            DSE+L+NVFA EL  H K   +V+  DVF+A  GV  RC G YA V+MI G G+V FRDP+ IRPLV+G R   + EGT  D++++SESV +D+LG+ LIRDV PGE VF+ + G IHT QC   +   ++PC+FEYVY ARPDS++D V VY+ARL MG KLA +++   PDH IDVVIPIP      DT+RTSA+Q A
Sbjct:   25 DSEVLLNVFAHELQQHAKLTMEVE--DVFNAVAGVHRRCRGAYAAVSMITGYGVVAFRDPFGIRPLVYGKRE--SPEGT--DYMMASESVALDVLGYELIRDVAPGEAVFISLDGQIHTRQCA--DNPSVTPCIFEYVYLARPDSIIDNVSVYKARLRMGDKLADKLRRLRPDHDIDVVIPIP------DTSRTSALQMA 210          
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A0A1Y1R2U4_9GAMM (Amidophosphoribosyltransferase n=2 Tax=Oceanospirillales TaxID=135619 RepID=A0A1Y1R2U4_9GAMM)

HSP 1 Score: 213 bits (543), Expect = 1.450e-63
Identity = 108/200 (54.00%), Postives = 144/200 (72.00%), Query Frame = 1
Query:    1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCA 600
            DSE+L+NVFA EL    K      P D+F A E V  RCEGGY+VV++ING G+VGFRDP  IRPLVFG R+ V  +    +++++SESV +D+LGF+L+RDV PGE V++D    +HT QC    +A  +PC+FEYVYFARPDS+LDKV VY++R+ MG KLA +I  ++PDH IDVV+PIP      DT+RT+A++ A
Sbjct:  127 DSEILLNVFAHELQQQGKL--SATPDDIFTAVERVYGRCEGGYSVVSVINGYGVVGFRDPNGIRPLVFGERDTVDGK----EYMIASESVALDVLGFKLVRDVRPGEAVYIDQNRQLHTRQCA--SEATCTPCIFEYVYFARPDSILDKVSVYKSRIRMGQKLADKILAEFPDHDIDVVMPIP------DTSRTAALELA 312          
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A7C046_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7C046_9GAMM)

HSP 1 Score: 210 bits (535), Expect = 2.130e-63
Identity = 107/201 (53.23%), Postives = 142/201 (70.65%), Query Frame = 1
Query:    1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCAY 603
            DSE+L+NVFA EL  H     ++  KD+F+A +GV  RC GGYAVV MI G+GIV FRDPY IRP+VFG R   T     +++V++SESV +D+LGF L+RD+ PGE +F+ V+G ++T QC   +  + SPC+FE VY ARPDS++D + VY+ARL MG  LA +I   YP+H IDVVIPIP      DT+RT+AVQ A+
Sbjct:  127 DSEVLLNVFAHEL--HKLNKLNINHKDIFEAVKGVHRRCRGGYAVVTMITGLGIVAFRDPYGIRPVVFGKRKTPTG----MEYVVASESVAIDILGFELVRDIAPGEAIFITVEGQLYTRQCA--DHQIYSPCIFEIVYMARPDSIIDGISVYKARLRMGKALAKKILRLYPNHDIDVVIPIP------DTSRTAAVQLAH 313          
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A0A2A5AHV0_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2A5AHV0_9GAMM)

HSP 1 Score: 213 bits (542), Expect = 2.280e-63
Identity = 108/200 (54.00%), Postives = 146/200 (73.00%), Query Frame = 1
Query:    1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCA 600
            DSE+L+N+FA EL   +K   +  P+D+F A   V  RCEG YAVVAMI G GIVGFRDP  IRP+++G+R   TA GT  +++++SESV +  LGF++IRD+ PGE +++D++G IHT QC   +K++ +PC+FE+VY ARPDS++D V VY+ARL MG KLA +IK  + DH IDVVIPIP      DT+RTSA+Q A
Sbjct:  127 DSEVLLNIFAHELQCRNKLSPE--PEDIFSAVSAVHRRCEGAYAVVAMITGYGIVGFRDPNGIRPVIYGSRE--TANGT--EYMIASESVALSSLGFKVIRDIAPGEAIYIDLEGNIHTRQCS--DKSVFNPCIFEFVYLARPDSIIDGVSVYKARLRMGEKLAEKIKRTWADHDIDVVIPIP------DTSRTSALQLA 312          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ89_ECTSI1.280e-10781.09Amidophosphoribosyltransferase n=2 Tax=Ectocarpus ... [more]
A0A3B0XQU3_9ZZZZ2.770e-6859.00Amidophosphoribosyltransferase n=1 Tax=hydrotherma... [more]
A0A4D9D0B8_9STRA2.400e-6554.23Amidophosphoribosyltransferase n=2 Tax=Monodopsida... [more]
A0A6N1DUE2_9GAMM9.180e-6557.71Amidophosphoribosyltransferase n=1 Tax=Ectothiorho... [more]
Q1N6Q0_9GAMM1.900e-6456.00Amidophosphoribosyltransferase n=1 Tax=Bermanella ... [more]
A0A661D1I3_9GAMM3.690e-6454.73Amidophosphoribosyltransferase n=1 Tax=Gammaproteo... [more]
A0A661DZ81_9GAMM4.710e-6455.50Amidophosphoribosyltransferase (Fragment) n=1 Tax=... [more]
A0A1Y1R2U4_9GAMM1.450e-6354.00Amidophosphoribosyltransferase n=2 Tax=Oceanospiri... [more]
A7C046_9GAMM2.130e-6353.23Amidophosphoribosyltransferase n=1 Tax=Beggiatoa s... [more]
A0A2A5AHV0_9GAMM2.280e-6354.00Amidophosphoribosyltransferase n=1 Tax=Gammaproteo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80924contigH-elongata_contig80924:175..2875 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score330.9
Seed ortholog evalue4.2e-88
Seed eggNOG ortholog2880.D8LJ89
Preferred nameADE4
KEGG rclassRC00010,RC02724,RC02752
KEGG koko:K00764
KEGG ReactionR01072
KEGG Pathwayko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130
KEGG ModuleM00048
GOsGO:0003674,GO:0003824,GO:0004044,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042440,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046083,GO:0046112,GO:0046148,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.amidophosphoribosyltransferase activity
EggNOG OGsCOG0034@1,KOG0572@2759
EC2.4.2.14
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAmidophosphoribosyltransferase
Ec32 orthologEc-02_005190.1
Exons6
Model size603
Cds size603
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80924.15748.1prot_H-elongata_contig80924.15748.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig80924 175..2875 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931215.4043853-CDS-H-elongata_contig80924:174..2311622931215.4043853-CDS-H-elongata_contig80924:174..231Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80924 175..231 +
1691679745.0123703-CDS-H-elongata_contig80924:174..2311691679745.0123703-CDS-H-elongata_contig80924:174..231Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80924 175..231 +
1622931215.4232767-CDS-H-elongata_contig80924:471..5521622931215.4232767-CDS-H-elongata_contig80924:471..552Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80924 472..552 +
1691679745.0265493-CDS-H-elongata_contig80924:471..5521691679745.0265493-CDS-H-elongata_contig80924:471..552Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80924 472..552 +
1622931215.4404604-CDS-H-elongata_contig80924:1348..15111622931215.4404604-CDS-H-elongata_contig80924:1348..1511Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80924 1349..1511 +
1691679745.0362737-CDS-H-elongata_contig80924:1348..15111691679745.0362737-CDS-H-elongata_contig80924:1348..1511Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80924 1349..1511 +
1622931215.4589062-CDS-H-elongata_contig80924:1709..18711622931215.4589062-CDS-H-elongata_contig80924:1709..1871Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80924 1710..1871 +
1691679745.0460527-CDS-H-elongata_contig80924:1709..18711691679745.0460527-CDS-H-elongata_contig80924:1709..1871Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80924 1710..1871 +
1622931215.4893434-CDS-H-elongata_contig80924:2430..25311622931215.4893434-CDS-H-elongata_contig80924:2430..2531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80924 2431..2531 +
1691679745.061108-CDS-H-elongata_contig80924:2430..25311691679745.061108-CDS-H-elongata_contig80924:2430..2531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80924 2431..2531 +
1622931215.5034335-CDS-H-elongata_contig80924:2836..28751622931215.5034335-CDS-H-elongata_contig80924:2836..2875Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80924 2837..2875 +
1691679745.0716395-CDS-H-elongata_contig80924:2836..28751691679745.0716395-CDS-H-elongata_contig80924:2836..2875Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80924 2837..2875 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig80924.15748.1

>prot_H-elongata_contig80924.15748.1 ID=prot_H-elongata_contig80924.15748.1|Name=mRNA_H-elongata_contig80924.15748.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=201bp
DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMIN
GIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLI
RDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKV
PVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCA
Y
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mRNA from alignment at H-elongata_contig80924:175..2875+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig80924.15748.1 ID=mRNA_H-elongata_contig80924.15748.1|Name=mRNA_H-elongata_contig80924.15748.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2701bp|location=Sequence derived from alignment at H-elongata_contig80924:175..2875+ (Himanthalia elongata Himel1 dioecious)
GATTCCGAGTTACTCATCAATGTGTTCGCCAAGGAGCTCACTACACACGA CAAGCAGGTGCCAGTAGAGCAGTCGAGCAGAAAATTTCGAAAGGGTAAGC ATAGGAGAAGGTGCGCGCGGGCTGCGAGCTGCGGGAGGCCTGAGGGTAGA CAGGATACGATTTCCTCGTTTGCTGTTGGAGTACGGTGGTTGGGTTGGTC AAGGATTTGTGAGCGTCACGACGTGTGCTGAAACTATAATGTTCCTCTTC AGCTAAAACTTCACACACGCTTGATCCCCACTCGAATCATGGCGCAGCCC CAGGACGTGAAGCCGAAAGATGTTTTCGACGCGGCGGAAGGCGTGATTTC GCGGTGCGAGGGTGGCTATGCCGTTGTGGTGGGTAAACGTTCCAAACCAG GCTAAATGTTTGAGTATCGATCCTGCGTACCAATAATCGTTCACATGTAG GATTTAGTCAGCAAGTTAAGCCCTTGCAAATGACTATTCTAGTGTCTATA GCTGATCTTGAACTACTGCCCGTAATGTGAACTACTCCGTATTTTTTTTG TTAAGATTTTGGGCTCATAGGTAGGAATGTAATGTACACACTCGAACCCG ACGATAGTTGGTCATAGTCCCCTTGACTTCATCATTCGTGATGTAATGAA GTATATAGGATATAGTATATAGGATATAGTGTGGATATTCGGAGGAGGGT TTGATTGAGTTGATATGTTTTTTTAGAAAAAGCTGGAGCAGGAATTGCTC CTGTCGAAAACAAAATAAACAACACCAAAATCCCCCCTTTAGGTGCCTCA ATTGCCTTTTAGATTTTCCCCAGCATCCACAAAAACACCCTTTCAGTATA TTTATTTTGAAGTAGCGGATAAAAATATTTCATATTATAGTGCAAGCTCG GCCTCGCCAAGCATGCATGTTCGATTGTTCTTTGGATTCTCTTATGGGAA CCTGCTGAAAAAATGGCAAAGTGTGTTTTGACACCAGCCCACCCGCAAGG ACACTTGAAGGATATAGGCAATATTTCTCTTCGAGTGAGAGCTCGATTAT CTTCGTTGTTGCGCGGCAGCAGGCTCCAACAAGTGTGCCGTCCCTCTTCG CCGATGCCCTCCTGACTGAGCCTGCCGCCAATGCTCAAATCTGAACCTTG AACACGGTTTCTCCTCAATAAAAGGCGATGATAAATGGCATTGGGATCGT GGGCTTTCGGGATCCGTACGCCATCCGGCCGCTGGTGTTTGGTACGCGGA ATAAGGTCACGGCAGAGGGAACCATCGTGGACCACGTCTTATCCAGCGAG AGCGTCGTGATGGACATGCTGGGTTTCCGCCTCATCCGTAAGTCTTTTCT TTAAAAAAAATAGCATTCTCAAAGCAAAACCAGGTTGAAAAATAAGCGCC CGCTTCAGCGTGTCGTGCGAGTATTCAGCTGAGGATTTTTAAAGGTTGGA AAACGCCTCTGCGTGCCTGCGTCAAAGCTCAAAATGACTCGCTGTATGTG GTACCGTCGGCTCTGTTGGCCCGTGAGGGGGTCAGGAGACGTGGGGCCGG GAGAGTGCGTATTCGTCGACGTGAAGGGAACCATCCACACCCATCAGTGC CCAGTTCCCGAGAAAGCCATGCTGAGCCCCTGCCTTTTCGAGTACGTGTA CTTCGCGAGGCCGGATTCTGTGCTGGACAAGGTTCCCGTCTACGAGGGTA AGGGGTGGATGCCGCCGCCGTGCATATTGTGTGTTTTTTTTATTAGCTTT TTTTGGAGGGAGGATGATTGTGCTCTCGGAAAAAGGAGGAGATGGGAAAA ATAAATGTCCGGTGAAGGATTGTGCCTTGCGTCAAGGTGGTTTGGTGCAT TCTGATGCGCTCGCCGTTGTTTACTCAGCGTTTCCACCCTCGAACCCCGC TGCTTCGAAACGCGCGTTCCGTACGTAGCCAACACGGCGAAGAGGGGGGT CGAAGTGTCTTGATGATCGAATAGACGATGATTATCCTTGCCTTGGTTCA GTCGTTCGTATCAGTGTACACACCTTTTGCTGGAAACAGCCAACCGCATG CATGATTGTGCACAAGCCGGACACGCTCGCGGGTGACGCTGTATGGTGTG GGCGCAAGGGAATTGCCTTGGCCCGATAGTTCAATACTGCTAGACTTGGG TACTAGGATTCGAGTGTCACCGACGCGAAATCACATGGTGCTAAATCCTG GACTCTAAAGACAGCCTGATTTGCGCATATGTGCCACGGTTCCTTGTGTA CCGCAGCTCGGCTGAACATGGGCGCGAAGCTAGCTGGACGAATTAAGGAG AAATACCCCGACCACCGCATCGACGTCGTCATCCCCATCCCAGGCAAGAA CGCTTCTGTCCGCGTCGGCGAATGCATCATCTTCCGGGCCGCGTCCTCTG TTTTGCGTCGCAGTTCAACGTCTTGGCCGTTCGCGGCCGAAATCAGGAAA CCCGTGGCATGTAGTGACGATGGGTGCGCGTGTTTGTCACTTGGGTAATT TTTTTTTTTTTTTTTTCGGGAGAAGCTACGCGCATAATTTTGTTTGGAAG ATCCGTTACCTTCCTGTGGTGCGCAAACATTGAGCGCGCCGTCGACTGAG CTACCCCGACCTACGAGACCCTGCCCTCGCCTGACCGTGAAATTTTGGCT TCTTCTGTCAAGACAGATACTGCCAGGACATCGGCAGTCCAGTGCGCCTA C
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Coding sequence (CDS) from alignment at H-elongata_contig80924:175..2875+

>mRNA_H-elongata_contig80924.15748.1 ID=mRNA_H-elongata_contig80924.15748.1|Name=mRNA_H-elongata_contig80924.15748.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1206bp|location=Sequence derived from alignment at H-elongata_contig80924:175..2875+ (Himanthalia elongata Himel1 dioecious)
GATTCCGAGTTACTCATCAATGTGTTCGCCAAGGAGCTCACTACACACGA
CAAGCAGGATTCCGAGTTACTCATCAATGTGTTCGCCAAGGAGCTCACTA
CACACGACAAGCAGCCCCAGGACGTGAAGCCGAAAGATGTTTTCGACGCG
GCGGAAGGCGTGATTTCGCGGTGCGAGGGTGGCTATGCCGTTGTGCCCCA
GGACGTGAAGCCGAAAGATGTTTTCGACGCGGCGGAAGGCGTGATTTCGC
GGTGCGAGGGTGGCTATGCCGTTGTGGCGATGATAAATGGCATTGGGATC
GTGGGCTTTCGGGATCCGTACGCCATCCGGCCGCTGGTGTTTGGTACGCG
GAATAAGGTCACGGCAGAGGGAACCATCGTGGACCACGTCTTATCCAGCG
AGAGCGTCGTGATGGACATGCTGGGTTTCCGCCTCATCCGCGATGATAAA
TGGCATTGGGATCGTGGGCTTTCGGGATCCGTACGCCATCCGGCCGCTGG
TGTTTGGTACGCGGAATAAGGTCACGGCAGAGGGAACCATCGTGGACCAC
GTCTTATCCAGCGAGAGCGTCGTGATGGACATGCTGGGTTTCCGCCTCAT
CCGAGACGTGGGGCCGGGAGAGTGCGTATTCGTCGACGTGAAGGGAACCA
TCCACACCCATCAGTGCCCAGTTCCCGAGAAAGCCATGCTGAGCCCCTGC
CTTTTCGAGTACGTGTACTTCGCGAGGCCGGATTCTGTGCTGGACAAGGT
TCCCGTCTACGAGGGAGACGTGGGGCCGGGAGAGTGCGTATTCGTCGACG
TGAAGGGAACCATCCACACCCATCAGTGCCCAGTTCCCGAGAAAGCCATG
CTGAGCCCCTGCCTTTTCGAGTACGTGTACTTCGCGAGGCCGGATTCTGT
GCTGGACAAGGTTCCCGTCTACGAGGCTCGGCTGAACATGGGCGCGAAGC
TAGCTGGACGAATTAAGGAGAAATACCCCGACCACCGCATCGACGTCGTC
ATCCCCATCCCAGGCAAGAACGCTTCTCTCGGCTGAACATGGGCGCGAAG
CTAGCTGGACGAATTAAGGAGAAATACCCCGACCACCGCATCGACGTCGT
CATCCCCATCCCAGGCAAGAACGCTTCTACAGATACTGCCAGGACATCGG
CAGTCCAGTGCGCCTACACAGATACTGCCAGGACATCGGCAGTCCAGTGC
GCCTAC
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