mRNA_H-elongata_contig80924.15748.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: D8LJ89_ECTSI (Amidophosphoribosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ89_ECTSI) HSP 1 Score: 328 bits (840), Expect = 1.280e-107 Identity = 163/201 (81.09%), Postives = 174/201 (86.57%), Query Frame = 1
Query: 1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCAY 603
DSELLINVFAKELT HDK+PQDV P+D+FDA GVISRCEGGYAVV MINGIGIVGFRDP IRPLVFGTR K A GT D+V+SSESVVMDMLGF+L RDV PGECVFVDVKG IHTHQC +P+ A LSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLA RI+EKYPDH IDVV+PIP DTARTSA+QCAY
Sbjct: 132 DSELLINVFAKELTNHDKRPQDVTPEDIFDAVGGVISRCEGGYAVVVMINGIGIVGFRDPNGIRPLVFGTREKTKAGGTTKDYVVSSESVVMDMLGFKLNRDVAPGECVFVDVKGNIHTHQCQLPDGASLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAKRIREKYPDHDIDVVLPIP------DTARTSALQCAY 326
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A0A3B0XQU3_9ZZZZ (Amidophosphoribosyltransferase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0XQU3_9ZZZZ) HSP 1 Score: 226 bits (575), Expect = 2.770e-68 Identity = 118/200 (59.00%), Postives = 149/200 (74.50%), Query Frame = 1
Query: 1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCA 600
DSE+L+NVFA EL K + K+VF A GV RC+GGYAVV MI G GIVGFRDP+ IRP+VFG R +T +GT D++++SESV +DM+GF LIRD+ PGE VF+D+KG IHT QC EK +PCLFE+VYFARPDS++D + VY+ARL MG KLA RI++++P+H IDVVIPIP DT+RTSA+Q A
Sbjct: 127 DSEILLNVFAHELGCQKKYT--ITEKEVFSAVAGVHRRCKGGYAVVTMIAGQGIVGFRDPHGIRPVVFGKR--ITEQGT--DYMIASESVALDMVGFELIRDIEPGEAVFIDLKGNIHTMQCA--EKVEYAPCLFEFVYFARPDSIIDNISVYKARLRMGEKLAARIRKEHPEHDIDVVIPIP------DTSRTSALQLA 312
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A0A4D9D0B8_9STRA (Amidophosphoribosyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0B8_9STRA) HSP 1 Score: 220 bits (560), Expect = 2.400e-65 Identity = 109/201 (54.23%), Postives = 140/201 (69.65%), Query Frame = 1
Query: 1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCAY 603
DSEL++NVFA+EL K +D+ P DVF+A +++RC G Y VV ++NG+G++GFRDP+ IRPLV GTRN T G + D +L+SESV +D L F L+ DVGPGE + + +G +H QC L PC+FEYVYFARPDS++D V VYEARLNMG +LA I KYP H IDVVIP+P DT+RTS + CAY
Sbjct: 129 DSELVLNVFAEELQAQHKG-RDICPTDVFEAVRKLMARCHGAYGVVMLVNGVGLLGFRDPHGIRPLVLGTRNSTTQAG-VTDFLLASESVAIDTLRFSLVGDVGPGEAILITTEGKLHRSQCA--RSPQLMPCIFEYVYFARPDSIMDGVQVYEARLNMGERLAESILRKYPQHDIDVVIPVP------DTSRTSGLSCAY 319
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A0A6N1DUE2_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Ectothiorhodospiraceae bacterium 2226 TaxID=2740164 RepID=A0A6N1DUE2_9GAMM) HSP 1 Score: 216 bits (551), Expect = 9.180e-65 Identity = 116/201 (57.71%), Postives = 142/201 (70.65%), Query Frame = 1
Query: 1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCAY 603
DSE+L+NVFA EL K D DVF+A GV RC GGYA VAMI G GIVGFRDP+ IRP+VFG R T +G ++V++SESV +D LGF L+RD+ PGE VF+D +G +HT QC E M SPC+FEYVYFARPDS++D V VY+ARL MG +LA +I +PDH IDVVIPIP DT+RTSA+Q +Y
Sbjct: 127 DSEILLNVFAHELGVGGKLRID--ENDVFNAVAGVHRRCRGGYAAVAMIAGYGIVGFRDPHGIRPIVFGKRE--TEQGA--EYVIASESVAIDALGFELVRDLEPGEAVFIDHEGNLHTRQCA--ENPMYSPCIFEYVYFARPDSIIDGVSVYKARLRMGDRLAAKILRDWPDHDIDVVIPIP------DTSRTSALQLSY 313
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: Q1N6Q0_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Bermanella marisrubri TaxID=207949 RepID=Q1N6Q0_9GAMM) HSP 1 Score: 216 bits (549), Expect = 1.900e-64 Identity = 112/200 (56.00%), Postives = 148/200 (74.00%), Query Frame = 1
Query: 1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCA 600
DSE+L+NVFA EL H+++ +DVFDA E V R +GGYAV+AMI GIG+VGFRDPY IRP VFG R T +GT +++++SESV +D LGF++IRD+ PGE V++DV G +HT QC E + PC+FE+VYFARPDS++DK+ VY+ARL MGA+LA +I + PDH IDVVIPIP DT+R+SA++ A
Sbjct: 127 DSEVLLNVFAHEL--HEQKKLKPTQEDVFDAVERVHKRVKGGYAVIAMIAGIGVVGFRDPYGIRPAVFGKRE--TEKGT--EYMIASESVALDALGFKVIRDIEPGEAVYIDVDGNLHTRQCA--ENPVYRPCIFEHVYFARPDSIIDKISVYKARLKMGARLAEKILRERPDHDIDVVIPIP------DTSRSSALELA 312
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A0A661D1I3_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661D1I3_9GAMM) HSP 1 Score: 215 bits (547), Expect = 3.690e-64 Identity = 110/201 (54.73%), Postives = 141/201 (70.15%), Query Frame = 1
Query: 1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCAY 603
DSE+L+N+FA EL H + KD+F+A +GV RC GGYAVVAMI G+G+V FRDPY IRP+VFG RN T GT ++V++SESV +D+LGF L+RD+ PGE +F+ G ++T QC + LSPC+FE VY ARPDS++D + VY+ARL MG LA +I YP H IDVVIPIP DT+RT+AVQ AY
Sbjct: 127 DSEILLNIFAHEL--HKLHKLQINQKDIFEAVKGVHKRCRGGYAVVAMITGVGLVAFRDPYGIRPVVFGKRN--TTAGT--EYVVASESVAIDVLGFELVRDIAPGEAIFITADGQLYTRQCA--DNPQLSPCIFEIVYMARPDSIMDGISVYKARLRMGKLLAKKILRLYPKHDIDVVIPIP------DTSRTAAVQLAY 313
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A0A661DZ81_9GAMM (Amidophosphoribosyltransferase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661DZ81_9GAMM) HSP 1 Score: 212 bits (539), Expect = 4.710e-64 Identity = 111/200 (55.50%), Postives = 142/200 (71.00%), Query Frame = 1
Query: 1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCA 600
DSE+L+NVFA EL H K +V+ DVF+A GV RC G YA V+MI G G+V FRDP+ IRPLV+G R + EGT D++++SESV +D+LG+ LIRDV PGE VF+ + G IHT QC + ++PC+FEYVY ARPDS++D V VY+ARL MG KLA +++ PDH IDVVIPIP DT+RTSA+Q A
Sbjct: 25 DSEVLLNVFAHELQQHAKLTMEVE--DVFNAVAGVHRRCRGAYAAVSMITGYGVVAFRDPFGIRPLVYGKRE--SPEGT--DYMMASESVALDVLGYELIRDVAPGEAVFISLDGQIHTRQCA--DNPSVTPCIFEYVYLARPDSIIDNVSVYKARLRMGDKLADKLRRLRPDHDIDVVIPIP------DTSRTSALQMA 210
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A0A1Y1R2U4_9GAMM (Amidophosphoribosyltransferase n=2 Tax=Oceanospirillales TaxID=135619 RepID=A0A1Y1R2U4_9GAMM) HSP 1 Score: 213 bits (543), Expect = 1.450e-63 Identity = 108/200 (54.00%), Postives = 144/200 (72.00%), Query Frame = 1
Query: 1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCA 600
DSE+L+NVFA EL K P D+F A E V RCEGGY+VV++ING G+VGFRDP IRPLVFG R+ V + +++++SESV +D+LGF+L+RDV PGE V++D +HT QC +A +PC+FEYVYFARPDS+LDKV VY++R+ MG KLA +I ++PDH IDVV+PIP DT+RT+A++ A
Sbjct: 127 DSEILLNVFAHELQQQGKL--SATPDDIFTAVERVYGRCEGGYSVVSVINGYGVVGFRDPNGIRPLVFGERDTVDGK----EYMIASESVALDVLGFKLVRDVRPGEAVYIDQNRQLHTRQCA--SEATCTPCIFEYVYFARPDSILDKVSVYKSRIRMGQKLADKILAEFPDHDIDVVMPIP------DTSRTAALELA 312
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A7C046_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7C046_9GAMM) HSP 1 Score: 210 bits (535), Expect = 2.130e-63 Identity = 107/201 (53.23%), Postives = 142/201 (70.65%), Query Frame = 1
Query: 1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCAY 603
DSE+L+NVFA EL H ++ KD+F+A +GV RC GGYAVV MI G+GIV FRDPY IRP+VFG R T +++V++SESV +D+LGF L+RD+ PGE +F+ V+G ++T QC + + SPC+FE VY ARPDS++D + VY+ARL MG LA +I YP+H IDVVIPIP DT+RT+AVQ A+
Sbjct: 127 DSEVLLNVFAHEL--HKLNKLNINHKDIFEAVKGVHRRCRGGYAVVTMITGLGIVAFRDPYGIRPVVFGKRKTPTG----MEYVVASESVAIDILGFELVRDIAPGEAIFITVEGQLYTRQCA--DHQIYSPCIFEIVYMARPDSIIDGISVYKARLRMGKALAKKILRLYPNHDIDVVIPIP------DTSRTAAVQLAH 313
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Match: A0A2A5AHV0_9GAMM (Amidophosphoribosyltransferase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2A5AHV0_9GAMM) HSP 1 Score: 213 bits (542), Expect = 2.280e-63 Identity = 108/200 (54.00%), Postives = 146/200 (73.00%), Query Frame = 1
Query: 1 DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINGIGIVGFRDPYAIRPLVFGTRNKVTAEGTIVDHVLSSESVVMDMLGFRLIRDVGPGECVFVDVKGTIHTHQCPVPEKAMLSPCLFEYVYFARPDSVLDKVPVYEARLNMGAKLAGRIKEKYPDHRIDVVIPIPGKNASTDTARTSAVQCA 600
DSE+L+N+FA EL +K + P+D+F A V RCEG YAVVAMI G GIVGFRDP IRP+++G+R TA GT +++++SESV + LGF++IRD+ PGE +++D++G IHT QC +K++ +PC+FE+VY ARPDS++D V VY+ARL MG KLA +IK + DH IDVVIPIP DT+RTSA+Q A
Sbjct: 127 DSEVLLNIFAHELQCRNKLSPE--PEDIFSAVSAVHRRCEGAYAVVAMITGYGIVGFRDPNGIRPVIYGSRE--TANGT--EYMIASESVALSSLGFKVIRDIAPGEAIYIDLEGNIHTRQCS--DKSVFNPCIFEFVYLARPDSIIDGVSVYKARLRMGEKLAEKIKRTWADHDIDVVIPIP------DTSRTSALQLA 312 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80924.15748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig80924.15748.1 >prot_H-elongata_contig80924.15748.1 ID=prot_H-elongata_contig80924.15748.1|Name=mRNA_H-elongata_contig80924.15748.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=201bp DSELLINVFAKELTTHDKQPQDVKPKDVFDAAEGVISRCEGGYAVVAMINback to top mRNA from alignment at H-elongata_contig80924:175..2875+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig80924.15748.1 ID=mRNA_H-elongata_contig80924.15748.1|Name=mRNA_H-elongata_contig80924.15748.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2701bp|location=Sequence derived from alignment at H-elongata_contig80924:175..2875+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig80924:175..2875+ >mRNA_H-elongata_contig80924.15748.1 ID=mRNA_H-elongata_contig80924.15748.1|Name=mRNA_H-elongata_contig80924.15748.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1206bp|location=Sequence derived from alignment at H-elongata_contig80924:175..2875+ (Himanthalia elongata Himel1 dioecious)back to top |