mRNA_H-elongata_contig80740.15725.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig80740.15725.1
Unique NamemRNA_H-elongata_contig80740.15725.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig80740.15725.1 vs. uniprot
Match: D7FLT3_ECTSI (tRNA(His) guanylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT3_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.470e-83
Identity = 152/315 (48.25%), Postives = 182/315 (57.78%), Query Frame = 1
Query:    1 SFVFFWPKHFPDTPLQYPPNFDARVVAYPKAQHIRDYFAWRQADCHINNLYNTCFWSLVADGELKQDAQVALKGTSSGDKNELLFSRFGINYNEVPHRFRKGTTLYRARPVPEA-----------LSEP----------------------------------QLPPAGCISHCYGREDSHVTAE-----TGSNVGSRTNYISASSKIAKGFQENTKGE-------DDVSTGQAAIDAKGNKEGADGSKKIEGG------VLRVGIRGHGAGRWKKTLKKGHAPPGAIEEVTCDIIRNDFWDGNPHLLS-GTQAR 753
            SFVFFWPKHFPDTPL YPPNFDAR+V+YP AQH+RDYF+WRQADCHINNLYNTCFW+LVADG  KQDAQVALKGT+SGDKNELLFSRF  NYNE+P RFRKGTTL+RARP   A           L +P                                  + P AG  +   G E   + A+       +N+G  T   S  S+  K    +  G+          +TG+   D +    G  G+ +  GG      V++V     G GR K+ LKKGHAPPGAIEE  CD+IR+DFWD NPH+L+ GT  R
Sbjct:  107 SFVFFWPKHFPDTPLLYPPNFDARIVSYPSAQHVRDYFSWRQADCHINNLYNTCFWALVADGVSKQDAQVALKGTTSGDKNELLFSRFDTNYNEIPQRFRKGTTLFRARPTAVAAXXXXXXXETPLRQPSRQDGAAAVDGSGDKGGRGPPVESGPISATATGGETPTAGRQAGETGVEAPRLAAQETNNRVENNIGVETIPDSRPSEDGKPEAGSEGGDAQAGVAASGAATGKGQGDKRPRGRGKGGASEKAGGAPRGDAVVKVVSCSDGKGRAKRLLKKGHAPPGAIEEDACDLIRDDFWDRNPHILAAGTMRR 421          
BLAST of mRNA_H-elongata_contig80740.15725.1 vs. uniprot
Match: A0A6H5KZK5_9PHAE (tRNA(His) guanylyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZK5_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 3.690e-66
Identity = 153/409 (37.41%), Postives = 184/409 (44.99%), Query Frame = 1
Query:    1 SFVFFWPKHFPDTPLQYPPNFDARVVAYPKAQ------------------------------------------------------------------------------------------HIRDYFAWRQADCHINNLYNTCFWSLVADGELKQDAQVALKGTSSGDKNELLFSRFGINYNEVPHRFRKGTTLYRARPVPEALSEP-----------------------------------------------QLPPAGCISHCYGREDSHVTAE-----TGSNVGSRTNYISASSKIAKGFQE-NTKGED--------DVSTGQAAIDAKGNKEGADGSKKIEGG------VLRVGIRGHGAGRWKKTLKKGHAPPGAIEEVTCDIIRNDFWDGNPHLLS-GTQAR 753
            SFVFFWPKHFPDTPL YPPNFDAR+++YP AQ                                                                                          H+RDYF+WRQADCHINNLYNTCFW+LVADG  KQDAQVALKGT+SGDKNELLFSRF  NYNE+P RFRKGTTL+RARP   A++ P                                               + P AG  +   G E   + A+       +N+G  T  I  S +   G  E  T+G D          +TG+   D   +  G  G+ +  GG      V++V     G GR K+ LKKGHAPPGAIEE  CD+IR+DFWD NPH+L+ GT  R
Sbjct:  130 SFVFFWPKHFPDTPLLYPPNFDARIISYPSAQASTPVVMLRVFLWHNHYFPLPLVHSGFKGVDGVINDKVLGVKVALRRLEADERSVNPSRAEGDLRAKDIVVDDTIDALKTTVDEEKGAAEHVRDYFSWRQADCHINNLYNTCFWALVADGVSKQDAQVALKGTTSGDKNELLFSRFDTNYNEIPQRFRKGTTLFRARPT--AVAAPXXXXXXXXXXRQPSRQDGAAAVDGSGDKGGRGPPVEGGPVSATATGGETPMAGQQAGETGVEAPTLAAQETNNRVENNIGVET--IPDSRRSGDGKPEAGTEGGDAQAGVAASGAATGKGLSDKGPHGRGKGGASEKAGGTPRGDAVVKVVSCSDGKGRAKRLLKKGHAPPGAIEEDACDLIRDDFWDRNPHILAAGTMRR 534          
BLAST of mRNA_H-elongata_contig80740.15725.1 vs. uniprot
Match: W4K9K2_HETIT (tRNA(His) guanylyltransferase n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4K9K2_HETIT)

HSP 1 Score: 177 bits (448), Expect = 3.470e-50
Identity = 106/252 (42.06%), Postives = 142/252 (56.35%), Query Frame = 1
Query:    1 SFVFFWPKHFPDTPLQYPPNFDARVVAYPKAQHIRDYFAWRQADCHINNLYNTCFWSLVADGELK-QDAQVALKGTSSGDKNELLFSRFGINYNEVPHRFRKGTTLYRARPVPEALSEPQLP--PAGCISHCYG-REDSHVTAETGSNVGSRTNYISASSKIAKGFQENTKGEDDVSTGQAAIDAKGNKEGAD--GSKKIEGGVLRVGIRGHGAGRWKKTL-KKGHAPPGAIEEVTCDIIRNDFWDGNPHLL 735
            ++V  WP HFPD PL+Y P FDAR+V YP A+ +RDYFAWRQAD HINNLYNT FW+LV  G L  ++A  +L+GT SG K+E+LFSRF +NYN +P RFRKG+ + R     E + + +L   P G +S      E S  T  T  N+G   +  SA+        E +  + DV             +GAD  GSKK +  + R   +G  +G  KK   +KG A    +  V CD+I + FWD   +LL
Sbjct:  107 AYVMHWPAHFPDEPLRYAPAFDARIVLYPSARAVRDYFAWRQADTHINNLYNTTFWALVQQGGLSTKEAHESLRGTVSGQKHEILFSRFNVNYNALPARFRKGSVMVR-----EEIPDEELVGVPMGSVSAADPVGESSSGTQSTSENIGPEGHATSATQPDT--LAERSPSDPDVLESSQPDAPPMLPQGADNKGSKKAQKRLARAQAKGAASGAQKKDRGEKGKARRTRVVLVHCDVIGDAFWDARGYLL 351          
BLAST of mRNA_H-elongata_contig80740.15725.1 vs. uniprot
Match: A0A067T6A4_GALM3 (tRNA(His) guanylyltransferase n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T6A4_GALM3)

HSP 1 Score: 169 bits (428), Expect = 1.330e-47
Identity = 100/250 (40.00%), Postives = 136/250 (54.40%), Query Frame = 1
Query:    1 SFVFFWPKHFPDTPLQYPPNFDARVVAYPKAQHIRDYFAWRQADCHINNLYNTCFWSLVADG-ELKQDAQVALKGTSSGDKNELLFSRFGINYNEVPHRFRKGTTLYRARPVPEALSEPQLPPAGCISHCYGREDSHVTAETGSNVGSRTNYISASSKI----AKGFQENTKGEDDVSTGQAAIDAKGNKEGADGSKKIEGGVLRVGIRGHGAGRWKKTLKKGHAPPGAIEEVTCDIIRNDFWDGNPHLL 735
            S+VF WP++FP  PLQYPP+FD R+V YP  ++IRDYFAWRQAD HINNLYNT FW+LV  G +   +A   L+GT S +K+E+LFSRFGINYN++  RFRKG+ L+R   +P    + + PPAG      GR DS  T    S+        S+S+ I    ++    NT G                           G   ++ +        KKT KK    P  ++ + CDII++DFW+  P +L
Sbjct:  107 SYVFHWPEYFPTIPLQYPPSFDGRIVLYPTEKNIRDYFAWRQADTHINNLYNTTFWALVQQGGQTTTEAHATLRGTFSKEKHEILFSRFGINYNQLNERFRKGSVLFREE-IPSEGDDAEEPPAGGD----GR-DSVQTKALDSDAAQNEVAESSSTPIIVIASEASPTNTHG---------------------------GAQPKMNL--------KKTKKKPKQQPTRLKTLHCDIIKDDFWNDRPMIL 315          
BLAST of mRNA_H-elongata_contig80740.15725.1 vs. uniprot
Match: A0A8H5F893_9AGAR (tRNA(His) guanylyltransferase n=1 Tax=Psilocybe cf. subviscida TaxID=2480587 RepID=A0A8H5F893_9AGAR)

HSP 1 Score: 166 bits (420), Expect = 1.230e-46
Identity = 94/248 (37.90%), Postives = 126/248 (50.81%), Query Frame = 1
Query:    1 SFVFFWPKHFPDTPLQYPPNFDARVVAYPKAQHIRDYFAWRQADCHINNLYNTCFWSLVADG-ELKQDAQVALKGTSSGDKNELLFSRFGINYNEVPHRFRKGTTLYRAR-PVPEALSEPQLPPAGCISHCYGREDSHVTAETGSNVGSRTNYISASSKIAKGFQENTKGEDDVSTGQAAIDAKGNKEGADGSKKIEGGVLRVGIRGHGAGRWKKTLKKGHAPPGAIEEVTCDIIRNDFWDGNPHLLS 738
            S+VF WP++F D PLQYPP+FD R+V YP  +HIRDYFAWRQAD HINNLYNT FW+LV  G +    A   LKGT S DKNE+LF++FGINY+ +  RFRKG+ L+R   P+ E    PQ P                T ET +          +++ +++                  +  K  K                          KK  K+ + P   IE V CDII++DFW+ +P +L+
Sbjct:  107 SYVFHWPEYFRDHPLQYPPSFDGRIVLYPSEKHIRDYFAWRQADTHINNLYNTTFWALVQQGGQTTTGAHATLKGTFSKDKNEILFAKFGINYSNIDERFRKGSVLFREEIPMSEGEPTPQAP----------------TPETATTADGTLAISESAAPLSE-----------------PLPTKETKP-------------------------KKDKKRDNQPMTRIEIVHCDIIKDDFWNAHPKILT 296          
BLAST of mRNA_H-elongata_contig80740.15725.1 vs. uniprot
Match: A0A1B9GG40_9TREE (tRNA(His) guanylyltransferase n=1 Tax=Kwoniella bestiolae CBS 10118 TaxID=1296100 RepID=A0A1B9GG40_9TREE)

HSP 1 Score: 164 bits (414), Expect = 1.710e-45
Identity = 105/248 (42.34%), Postives = 132/248 (53.23%), Query Frame = 1
Query:    1 SFVFFWPKHFPDTPLQYPPNFDARVVAYPKAQHIRDYFAWRQADCHINNLYNTCFWSLVADGELKQDAQVALKGTSSGDKNELLFSRFGINYNEVPHRFRKGTTLYRARPVPEA---LSEPQLPPAGCISHCYGREDSHVTAETGSNVGSRTNYISASSKIAKGFQENTKGEDDVSTGQAAIDAKGNKEGADGSKKIEGGVLRVGIRGHGAGRWKKTLKKGHAPPGAIEEVTCDIIRNDFWDGNPHLL 735
            S+VF WP +FPD PL+YPP+FD+R V YP  + +RDYFAWRQAD HINNLYNT FW+LV DG+   +A   L+GT S DKNELLFS FGINYN +P ++RKG+   R RPV  A    S  Q+  AG  S    R+D+    E  S +  +    ++SS    G +E        +  QA+ D      G    KK+                  K  K      G I  V  DIIR+DFW   P LL
Sbjct:  107 SYVFHWPSYFPDNPLKYPPSFDSRAVMYPGEREVRDYFAWRQADTHINNLYNTAFWALVKDGQSTAEANKTLQGTDSKDKNELLFSNFGINYNNLPEQYRKGSICVR-RPVLSADADTSSQQV--AGSSSK--QRQDASRAIEGVSYLSMKD---TSSSTTTDGTEE--------AVDQASADTTNGLLGK--QKKV------------------KKPKPYEGIDGEIVVVYEDIIRDDFWKERPWLL 318          
BLAST of mRNA_H-elongata_contig80740.15725.1 vs. uniprot
Match: A0A409V997_9AGAR (tRNA(His) guanylyltransferase n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409V997_9AGAR)

HSP 1 Score: 159 bits (401), Expect = 9.800e-45
Identity = 69/107 (64.49%), Postives = 85/107 (79.44%), Query Frame = 1
Query:    4 FVFFWPKHFPDTPLQYPPNFDARVVAYPKAQHIRDYFAWRQADCHINNLYNTCFWSLVADG-ELKQDAQVALKGTSSGDKNELLFSRFGINYNEVPHRFRKGTTLYR 321
            +VF+WP++FPDTPLQYPP+FD R+V YP  Q +RDYFAWRQAD HINNLYNT FW+LV  G +   DA   L+GT S +KNE+LFSRFGINYN +  RFRKG+ ++R
Sbjct:  108 YVFYWPQYFPDTPLQYPPSFDGRIVLYPTEQLVRDYFAWRQADTHINNLYNTTFWALVQQGGQTTTDAHATLRGTLSKEKNEILFSRFGINYNTIDARFRKGSVIFR 214          
BLAST of mRNA_H-elongata_contig80740.15725.1 vs. uniprot
Match: A0A7M7NV14_STRPU (tRNA(His) guanylyltransferase n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NV14_STRPU)

HSP 1 Score: 159 bits (403), Expect = 1.060e-44
Identity = 72/106 (67.92%), Postives = 82/106 (77.36%), Query Frame = 1
Query:    1 SFVFFWPKHFPDTPLQYPPNFDARVVAYPKAQHIRDYFAWRQADCHINNLYNTCFWSLVADGELK-QDAQVALKGTSSGDKNELLFSRFGINYNEVPHRFRKGTTL 315
            SFVF WPK FPD PLQYPP FD R V YP  +++RDY +WRQADCHINNLYNTCFW+L+  G    ++A+  LKGT SGDKNELLFS+F INYN  P  FRKGTTL
Sbjct:  107 SFVFLWPKFFPDMPLQYPPAFDGRCVLYPSNKNLRDYLSWRQADCHINNLYNTCFWTLIQRGNCSPKEAEERLKGTVSGDKNELLFSQFDINYNAEPEVFRKGTTL 212          
BLAST of mRNA_H-elongata_contig80740.15725.1 vs. uniprot
Match: A0A5M6C3N6_9TREE (tRNA(His) guanylyltransferase n=1 Tax=Kwoniella shandongensis TaxID=1734106 RepID=A0A5M6C3N6_9TREE)

HSP 1 Score: 162 bits (409), Expect = 1.130e-44
Identity = 96/245 (39.18%), Postives = 129/245 (52.65%), Query Frame = 1
Query:    1 SFVFFWPKHFPDTPLQYPPNFDARVVAYPKAQHIRDYFAWRQADCHINNLYNTCFWSLVADGELKQDAQVALKGTSSGDKNELLFSRFGINYNEVPHRFRKGTTLYRARPVPEALSEPQLPPAGCISHCYGREDSHVTAETGSNVGSRTNYISASSKIAKGFQENTKGEDDVSTGQAAIDAKGNKEGADGSKKIEGGVLRVGIRGHGAGRWKKTLKKGHAPPGAIEEVTCDIIRNDFWDGNPHLL 735
            S+VF+WP  FP+ PLQYPP FD+RVV YP    +RDYF+WRQAD HINNLYNT FW+LV  G+   +A   L+GT S DKNE+LFS++GINYN +P  +RKG+   R  P   A S  +LP    I          +     S+  SR   I   ++ ++    NT   D+ +  Q+++ A    E  DG             R H   +  K +K      G +  +  DII N FW+  P LL
Sbjct:  107 SYVFYWPHFFPNMPLQYPPCFDSRVVLYPGVTELRDYFSWRQADTHINNLYNTTFWALVHGGQSTAEANKTLQGTDSKDKNEILFSQYGINYNNIPEIYRKGSICVREPPSTHA-STSKLPIRATIDD--------IPTSASSSTSSR---IPTPNQQSESISINTNKSDEGTEIQSSVAAT---EVTDGPS-----------RPHRTEKKPKKIKPYEGTEGEVVVIHEDIIGNKFWEARPWLL 325          
BLAST of mRNA_H-elongata_contig80740.15725.1 vs. uniprot
Match: A0A4P9XK00_9FUNG (tRNA(His) guanylyltransferase n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XK00_9FUNG)

HSP 1 Score: 159 bits (403), Expect = 2.430e-44
Identity = 74/125 (59.20%), Postives = 94/125 (75.20%), Query Frame = 1
Query:    1 SFVFFWPKHFPDTPLQYPPNFDARVVAYPKAQHIRDYFAWRQADCHINNLYNTCFWSLVADGEL-KQDAQVALKGTSSGDKNELLFSRFGINYNEVPHRFRKGTTLYRARPVPEALSEPQLPPAG 372
            ++V +WP+ FP+TPLQYPP+FDAR V YP ++ +RDY +WRQADCHINNLYNTCFW+LV  G + +++A+  L+GT S DKNELLFSRFGINY  +P  FRKGTTL     V E +  P   P+G
Sbjct:  107 AYVLYWPEFFPETPLQYPPSFDARAVCYPTSRILRDYLSWRQADCHINNLYNTCFWTLVQQGGMPEKEAEETLRGTFSADKNELLFSRFGINYAHLPAIFRKGTTL-----VWEEVEIPVTTPSG 226          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80740.15725.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLT3_ECTSI1.470e-8348.25tRNA(His) guanylyltransferase n=1 Tax=Ectocarpus s... [more]
A0A6H5KZK5_9PHAE3.690e-6637.41tRNA(His) guanylyltransferase n=1 Tax=Ectocarpus s... [more]
W4K9K2_HETIT3.470e-5042.06tRNA(His) guanylyltransferase n=1 Tax=Heterobasidi... [more]
A0A067T6A4_GALM31.330e-4740.00tRNA(His) guanylyltransferase n=1 Tax=Galerina mar... [more]
A0A8H5F893_9AGAR1.230e-4637.90tRNA(His) guanylyltransferase n=1 Tax=Psilocybe cf... [more]
A0A1B9GG40_9TREE1.710e-4542.34tRNA(His) guanylyltransferase n=1 Tax=Kwoniella be... [more]
A0A409V997_9AGAR9.800e-4564.49tRNA(His) guanylyltransferase n=1 Tax=Panaeolus cy... [more]
A0A7M7NV14_STRPU1.060e-4467.92tRNA(His) guanylyltransferase n=1 Tax=Strongylocen... [more]
A0A5M6C3N6_9TREE1.130e-4439.18tRNA(His) guanylyltransferase n=1 Tax=Kwoniella sh... [more]
A0A4P9XK00_9FUNG2.430e-4459.20tRNA(His) guanylyltransferase n=1 Tax=Thamnocephal... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80740contigH-elongata_contig80740:483..2032 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score264.6
Seed ortholog evalue4.7e-68
Seed eggNOG ortholog2880.D7FLT3
Preferred nameTHG1
KEGG koko:K10761
GOsGO:0000966,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008192,GO:0008193,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070568,GO:0071704,GO:0090304,GO:0099116,GO:1901360
EggNOG free text desc.tRNAHis guanylyltransferase
EggNOG OGsCOG4021@1,KOG2721@2759
EC2.7.7.79
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptiontRNAHis guanylyltransferase Thg1
Ec32 orthologEc-26_001350.1
Exons4
Model size759
Cds size759
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80740.15725.1prot_H-elongata_contig80740.15725.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig80740 483..2032 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931213.0039675-CDS-H-elongata_contig80740:482..8061622931213.0039675-CDS-H-elongata_contig80740:482..806Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80740 483..806 -
1691679744.0365388-CDS-H-elongata_contig80740:482..8061691679744.0365388-CDS-H-elongata_contig80740:482..806Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80740 483..806 -
1622931213.0228424-CDS-H-elongata_contig80740:854..11051622931213.0228424-CDS-H-elongata_contig80740:854..1105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80740 855..1105 -
1691679744.0485628-CDS-H-elongata_contig80740:854..11051691679744.0485628-CDS-H-elongata_contig80740:854..1105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80740 855..1105 -
1622931213.0401459-CDS-H-elongata_contig80740:1348..14361622931213.0401459-CDS-H-elongata_contig80740:1348..1436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80740 1349..1436 -
1691679744.0589578-CDS-H-elongata_contig80740:1348..14361691679744.0589578-CDS-H-elongata_contig80740:1348..1436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80740 1349..1436 -
1622931213.0569088-CDS-H-elongata_contig80740:1936..20321622931213.0569088-CDS-H-elongata_contig80740:1936..2032Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80740 1937..2032 -
1691679744.0706947-CDS-H-elongata_contig80740:1936..20321691679744.0706947-CDS-H-elongata_contig80740:1936..2032Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80740 1937..2032 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig80740.15725.1

>prot_H-elongata_contig80740.15725.1 ID=prot_H-elongata_contig80740.15725.1|Name=mRNA_H-elongata_contig80740.15725.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=253bp
SFVFFWPKHFPDTPLQYPPNFDARVVAYPKAQHIRDYFAWRQADCHINNL
YNTCFWSLVADGELKQDAQVALKGTSSGDKNELLFSRFGINYNEVPHRFR
KGTTLYRARPVPEALSEPQLPPAGCISHCYGREDSHVTAETGSNVGSRTN
YISASSKIAKGFQENTKGEDDVSTGQAAIDAKGNKEGADGSKKIEGGVLR
VGIRGHGAGRWKKTLKKGHAPPGAIEEVTCDIIRNDFWDGNPHLLSGTQA
RG*
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mRNA from alignment at H-elongata_contig80740:483..2032-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig80740.15725.1 ID=mRNA_H-elongata_contig80740.15725.1|Name=mRNA_H-elongata_contig80740.15725.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1550bp|location=Sequence derived from alignment at H-elongata_contig80740:483..2032- (Himanthalia elongata Himel1 dioecious)
AGTTTCGTATTTTTTTGGCCGAAGCACTTCCCGGACACGCCGCTGCAGTA TCCACCAAACTTTGATGCTCGAGTAGTTGCCTACCCCAAAGCTCAGGTGC GCTTAGAAAGCCGCTCCAAACCTAGAAGGACTCACCTTGAAGAGGCATGT GCAGGTTTGGCCGAATGAGAAACCAGCTTCTGTCGTTCGCGAGGAATTGA TTCCGTCTTGGGCTGCTGATTCTTGCTGCAAGGTTTGCCAGGGCCTCTTT CATCGCCGAGGGGTTTTCTCCTATTCCAACCCGTTAGCTCAGTGATGCTC CTATCAGTGATGCTTCAGCAGGCATCGATCGATGTGTTTCTGTGATGTCA CTTAGGGTACATGGAGCAATAATTGAAGAGTTTCGGGGCATGAGTCAATG CAACAGTCCTACGGACGATTGCCAATACATCGCACCACGTAGCCGACCAT TGCCTGCTGTTTTTTCGTTTTCTTTGTTGATGCTCGGTGCACAAGCGGTG GAGTTCCCCCCCCACCCCCCCGCGAGATACGGAATGCGCCTTAGTCTTTT CTCGGGCGTTCTTGATTTCCCTCCCCCCCTCCCCCCGCGTGAACAGCATA TTCGGGACTATTTTGCATGGAGGCAGGCGGACTGTCACATCAATAACCTG TACAACACGTGCTTCTGGTCTCTTGTCGCCGATGGTGAGGATCTCCGCCG TCAACTCGACTCGGCTCGACTCGAACATTGTTGTACGAATTTAGCTGTCC TGGAGAGTTAGTTTCTCTCGTTAGCTTTCTATTAATAGATAATGGTGAAG GCGATCCCACTACTGCACCGGGCCTTTTCAACGCCCTCACCAGTCACCAG CTGTCAAGCCGTGAATACAACAAACGCTTGGGTGAAATCGTACCTTCCAC CGCGATTGCGTGTCGTGACATCTGCAGGGGAGTTGAAGCAGGATGCCCAA GTCGCGCTCAAAGGTACCTCATCCGGCGATAAAAACGAGCTCCTCTTCTC GAGATTCGGTATAAACTACAACGAAGTTCCGCACCGATTCCGCAAGGGCA CAACGCTATATCGGGCCCGGCCTGTACCCGAAGCCCTGTCCGAGCCGCAG CTGCCGCCGGCTGGGTGCATTTCGCATTGCTACGGCAGAGAGGATAGCCA CGTTACGGCGGAGACTGGTTCCAATGTGGTGGAGAGCGAGGTGGCCCAGA AGGGCGCAAAACCGGCCGGTCTCGAGGGATCACGGACCAATTATATTTCT GCAAGCAGCAAAATCGCCAAGGGTTTCCAAGAGAACACAAAAGGGGAAGA CGATGTAAGTACTGGACAGGCAGCCATTGACGCGAAAGGTAACAAAGAAG GGGCCGACGGTAGCAAGAAGATTGAAGGTGGCGTTTTGAGAGTCGGGATC AGGGGGCACGGGGCGGGGCGATGGAAGAAGACACTGAAGAAGGGACATGC GCCTCCCGGCGCCATTGAGGAGGTTACATGTGATATTATTCGAAATGATT TTTGGGATGGAAATCCCCACCTCTTATCCGGTACCCAAGCGCGTGGATGA
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Coding sequence (CDS) from alignment at H-elongata_contig80740:483..2032-

>mRNA_H-elongata_contig80740.15725.1 ID=mRNA_H-elongata_contig80740.15725.1|Name=mRNA_H-elongata_contig80740.15725.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1518bp|location=Sequence derived from alignment at H-elongata_contig80740:483..2032- (Himanthalia elongata Himel1 dioecious)
AGTTTCGTATTTTTTTGGCCGAAGCACTTCCCGGACACGCCGCTGCAGTA
TCCACCAAACTTTGATGCTCGAGTAGTTGCCTACCCCAAAGCTCAGAGTT
TCGTATTTTTTTGGCCGAAGCACTTCCCGGACACGCCGCTGCAGTATCCA
CCAAACTTTGATGCTCGAGTAGTTGCCTACCCCAAAGCTCAGCATATTCG
GGACTATTTTGCATGGAGGCAGGCGGACTGTCACATCAATAACCTGTACA
ACACGTGCTTCTGGTCTCTTGTCGCCGATGCATATTCGGGACTATTTTGC
ATGGAGGCAGGCGGACTGTCACATCAATAACCTGTACAACACGTGCTTCT
GGTCTCTTGTCGCCGATGGGGAGTTGAAGCAGGATGCCCAAGTCGCGCTC
AAAGGTACCTCATCCGGCGATAAAAACGAGCTCCTCTTCTCGAGATTCGG
TATAAACTACAACGAAGTTCCGCACCGATTCCGCAAGGGCACAACGCTAT
ATCGGGCCCGGCCTGTACCCGAAGCCCTGTCCGAGCCGCAGCTGCCGCCG
GCTGGGTGCATTTCGCATTGCTACGGCAGAGAGGATAGCCACGTTACGGC
GGAGACTGGTTCCAATGTGGGGAGTTGAAGCAGGATGCCCAAGTCGCGCT
CAAAGGTACCTCATCCGGCGATAAAAACGAGCTCCTCTTCTCGAGATTCG
GTATAAACTACAACGAAGTTCCGCACCGATTCCGCAAGGGCACAACGCTA
TATCGGGCCCGGCCTGTACCCGAAGCCCTGTCCGAGCCGCAGCTGCCGCC
GGCTGGGTGCATTTCGCATTGCTACGGCAGAGAGGATAGCCACGTTACGG
CGGAGACTGGTTCCAATGTGGGATCACGGACCAATTATATTTCTGCAAGC
AGCAAAATCGCCAAGGGTTTCCAAGAGAACACAAAAGGGGAAGACGATGT
AAGTACTGGACAGGCAGCCATTGACGCGAAAGGTAACAAAGAAGGGGCCG
ACGGTAGCAAGAAGATTGAAGGTGGCGTTTTGAGAGTCGGGATCAGGGGG
CACGGGGCGGGGCGATGGAAGAAGACACTGAAGAAGGGACATGCGCCTCC
CGGCGCCATTGAGGAGGTTACATGTGATATTATTCGAAATGATTTTTGGG
ATGGAAATCCCCACCTCTTATCCGGTACCCAAGCGCGTGGATGAGGATCA
CGGACCAATTATATTTCTGCAAGCAGCAAAATCGCCAAGGGTTTCCAAGA
GAACACAAAAGGGGAAGACGATGTAAGTACTGGACAGGCAGCCATTGACG
CGAAAGGTAACAAAGAAGGGGCCGACGGTAGCAAGAAGATTGAAGGTGGC
GTTTTGAGAGTCGGGATCAGGGGGCACGGGGCGGGGCGATGGAAGAAGAC
ACTGAAGAAGGGACATGCGCCTCCCGGCGCCATTGAGGAGGTTACATGTG
ATATTATTCGAAATGATTTTTGGGATGGAAATCCCCACCTCTTATCCGGT
ACCCAAGCGCGTGGATGA
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