mRNA_H-elongata_contig80328.15684.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig80328.15684.1
Unique NamemRNA_H-elongata_contig80328.15684.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig80328.15684.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 1.480e-41
Identity = 84/135 (62.22%), Postives = 102/135 (75.56%), Query Frame = 3 
Query: 1083 ISPVIEEMLRHQGGVLERHGKRELILSFARQRWEEPPPPVEGNLRQVAENLLNLLTLIDEEGFFAEPVTETAAPGYIAAILRPMDLGTMRRRAEGGAYDSMDMLQDDLVLVVANCLSYNAPDTIFSEAAMSLARQ 1487
            IS +I  ML HQ  VL RHGK  +IL  AR+RW+ PPPPV+ NL  + E+LL +L  IDEEG+FAEPV+E+AAPGYI+AILRPMDLGT+R R EG  Y  +  LQDDL+LVVANC +YN+P T+F  AA SLA Q
Sbjct: 1835 ISDLINGMLEHQKDVLARHGKLGVILRLARERWQSPPPPVDANLSALTEHLLGILGAIDEEGWFAEPVSESAAPGYISAILRPMDLGTVRGRLEGRRYRDVAELQDDLLLVVANCFTYNSPGTLFEAAATSLAEQ 1969
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BLAST of mRNA_H-elongata_contig80328.15684.1 vs. uniprot
Match: D8LEP1_ECTSI (WD-repeat protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP1_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 2.000e-32
Identity = 68/98 (69.39%), Postives = 80/98 (81.63%), Query Frame = 2 
Query:    2 RDRLLLAVKNVVNTDDAAPFAKPVDVENYHAIVPVPMDLSLIVRRLEKDYYCCVDAVEFDCNLVYANCTKYNRPGSEIVKLASRVTDRLVQAIKTVTE 295
            RD L   V+ V  + DAA FA+PVDV +YH IVPVPMDL LI+RRLEKDYYC V+A+EFDCNLVY NCTKYN PGS+IVKLA  V+D+LVQAIK ++E
Sbjct: 1561 RDALAAKVREVAESPDAALFAEPVDVVDYHTIVPVPMDLGLILRRLEKDYYCSVEALEFDCNLVYDNCTKYNEPGSDIVKLAFTVSDQLVQAIKAISE 1658
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BLAST of mRNA_H-elongata_contig80328.15684.1 vs. uniprot
Match: UPI0015A81816 (bromodomain-containing protein 1-like isoform X1 n=6 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015A81816)

HSP 1 Score: 81.3 bits (199), Expect = 1.910e-12
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 3 
Query: 1233 LLNLLTLIDEEGFFAEPVTETAAPGYIAAILRPMDLGTMRRRAEGGAYDSMDMLQDDLVLVVANCLSYNAPDTIFSEAAMSLARQ 1487
            +LN L   D+   FA+PV+    P Y+  I RPMD  TMRRR E   Y  +D  +DD  L+VANC+ YNA DT+F  AA+ L  Q
Sbjct:  577 VLNQLQEKDQARIFAQPVSVKEVPDYLDHIKRPMDFSTMRRRVEAQGYRGLDQFEDDFNLIVANCMKYNAKDTVFYRAAVRLRDQ 661
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BLAST of mRNA_H-elongata_contig80328.15684.1 vs. uniprot
Match: A0A8B7NCE2_HYAAZ (bromodomain-containing protein 7-like n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NCE2_HYAAZ)

HSP 1 Score: 79.7 bits (195), Expect = 3.370e-12
Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 3 
Query: 1200 VEGNLRQVAENLLNLLTLIDEEGFFAEPVTETAAPGYIAAILRPMDLGTMRRRAEGGAYDSMDMLQDDLVLVVANCLSYNAPDTIFSEAAMSL 1478
            V    +++  +LL  L   D   FF EPVT+  APGY + I  PM   TMR +   GAY S+   +DD+ L+VANCL YN PDT++  A   L
Sbjct:  112 VAAAFKELLTHLLKQLEKKDINQFFLEPVTDLIAPGYSSIITEPMCFYTMREKIAQGAYSSLTEYEDDVKLIVANCLKYNGPDTVYYSAGKKL 204
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BLAST of mRNA_H-elongata_contig80328.15684.1 vs. uniprot
Match: A0A061QRC8_9CHLO (Bromodomain-containing protein 7/9 (Fragment) n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QRC8_9CHLO)

HSP 1 Score: 76.6 bits (187), Expect = 1.940e-11
Identity = 38/97 (39.18%), Postives = 55/97 (56.70%), Query Frame = 3 
Query: 1188 PPPPVEGNLRQVAENLLNLLTLIDEEGFFAEPVTETAAPGYIAAILRPMDLGTMRRRAEGGAYDSMDMLQDDLVLVVANCLSYNAPDTIFSEAAMSL 1478
            P P   G  R+  E +++ +   D    F EPVTE  APGY   I  PMD  T+R R     Y S D L++DLVL+  N ++YN P+T+F + A+++
Sbjct:  243 PRPAARGPPRKELEKVVDAIQKKDTYDIFREPVTEDLAPGYFDVISNPMDFTTIRARISEERYASWDELEEDLVLMFDNAMTYNGPETLFHKLALTM 339
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BLAST of mRNA_H-elongata_contig80328.15684.1 vs. uniprot
Match: A0A8C4R743_EPTBU (Bromodomain and PHD finger containing, 1 n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4R743_EPTBU)

HSP 1 Score: 77.8 bits (190), Expect = 2.310e-11
Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 3 
Query: 1236 LNLLTLIDEEGFFAEPVTETAAPGYIAAILRPMDLGTMRRRAEGGAYDSMDMLQDDLVLVVANCLSYNAPDTIFSEAAMSLARQ 1487
            L LL   D  G+FA+PV+   A  Y+  I +PMD  TMR R E   Y S+D L+ D +L+++NC+ YNA DT+F  AAM L  Q
Sbjct:  707 LALLQEKDAGGYFAQPVSLEEASDYLDHINQPMDFSTMRARLEAHEYSSLDTLEQDFMLILSNCMIYNAKDTVFYRAAMRLREQ 790
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BLAST of mRNA_H-elongata_contig80328.15684.1 vs. uniprot
Match: UPI0004F00069 (bromodomain and PHD finger-containing protein 3-like n=1 Tax=Merops nubicus TaxID=57421 RepID=UPI0004F00069)

HSP 1 Score: 74.3 bits (181), Expect = 2.970e-11
Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 3 
Query: 1236 LNLLTLIDEEGFFAEPVTETAAPGYIAAILRPMDLGTMRRRAEGGAYDSMDMLQDDLVLVVANCLSYNAPDTIFSEAAMSL 1478
            L+LL   D    FAEPV     P Y+  I +PMD  TMRR+ E   Y +++  ++D  L+VANC+ YNA DTIF  AA+ L
Sbjct:   67 LDLLQEKDAAQIFAEPVDLNEVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVANCMRYNAKDTIFHRAAVRL 147
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BLAST of mRNA_H-elongata_contig80328.15684.1 vs. uniprot
Match: A0A7S1TVN5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVN5_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.290e-11
Identity = 40/96 (41.67%), Postives = 60/96 (62.50%), Query Frame = 2 
Query:    2 RDRLLLAVKNVVNTDDAAPFAKPVDVEN---YHAIVPVPMDLSLIVRRLEKDYYCCVDAVEFDCNLVYANCTKYNRPGSEIVKLASRVTDRLVQAI 280
            R+ L  AV  ++    AAPF +PV++     Y  +VP P+DLSLI+RRL  DYY  +DA+ FD  L++ NC  +N   S+I + A+RV +RL + +
Sbjct:  145 REFLAQAVGELMEQRFAAPFKEPVNLAALPLYGRMVPNPIDLSLIMRRLANDYYHTLDALAFDARLLHGNCLHFNLEESDIARQAARVLERLERIV 240
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BLAST of mRNA_H-elongata_contig80328.15684.1 vs. uniprot
Match: A0A3Q0DGN3_MESAU (bromodomain and PHD finger-containing protein 3 isoform X2 n=13 Tax=Muroidea TaxID=337687 RepID=A0A3Q0DGN3_MESAU)

HSP 1 Score: 76.3 bits (186), Expect = 7.130e-11
Identity = 37/81 (45.68%), Postives = 51/81 (62.96%), Query Frame = 3 
Query: 1236 LNLLTLIDEEGFFAEPVTETAAPGYIAAILRPMDLGTMRRRAEGGAYDSMDMLQDDLVLVVANCLSYNAPDTIFSEAAMSL 1478
            L+LL   D    FAEPV+ +  P Y+  I +PMD  TMRR+ E   Y +++  ++D  L+VANC+ YNA DTIF  AA+ L
Sbjct:  601 LDLLQEKDPAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVANCMKYNAKDTIFHRAAVRL 681
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BLAST of mRNA_H-elongata_contig80328.15684.1 vs. uniprot
Match: A0A0N1IBM7_PAPXU (Peregrin n=2 Tax=Papilio xuthus TaxID=66420 RepID=A0A0N1IBM7_PAPXU)

HSP 1 Score: 76.3 bits (186), Expect = 7.290e-11
Identity = 41/115 (35.65%), Postives = 59/115 (51.30%), Query Frame = 3 
Query: 1143 KRELILSFARQRWEEPPPPVEGNLRQVAENLLNLLTLIDEEGFFAEPVTETAAPGYIAAILRPMDLGTMRRRAEGGAYDSMDMLQDDLVLVVANCLSYNAPDTIFSEAAMSLARQ 1487
            KRE + +   + WE          R     LL LL L D    F EPV     P Y   + +PMDL TM ++ E GAY ++D ++ D  L++ NCL+YN  DT+F +A + +  Q
Sbjct:  571 KRERLKAEHTRVWERCVMHALRPARAALHKLLRLLRLRDTSDVFTEPVDLNEVPDYSTVVKQPMDLSTMGKKLERGAYRTIDDVETDFNLMIDNCLTYNNKDTVFYKAGIKMREQ 685
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80328.15684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTA2_9PHAE1.480e-4162.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEP1_ECTSI2.000e-3269.39WD-repeat protein, putative n=1 Tax=Ectocarpus sil... [more]
UPI0015A818161.910e-1247.06bromodomain-containing protein 1-like isoform X1 n... [more]
A0A8B7NCE2_HYAAZ3.370e-1243.01bromodomain-containing protein 7-like n=1 Tax=Hyal... [more]
A0A061QRC8_9CHLO1.940e-1139.18Bromodomain-containing protein 7/9 (Fragment) n=2 ... [more]
A0A8C4R743_EPTBU2.310e-1146.43Bromodomain and PHD finger containing, 1 n=2 Tax=E... [more]
UPI0004F000692.970e-1145.68bromodomain and PHD finger-containing protein 3-li... [more]
A0A7S1TVN5_9STRA3.290e-1141.67Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A3Q0DGN3_MESAU7.130e-1145.68bromodomain and PHD finger-containing protein 3 is... [more]
A0A0N1IBM7_PAPXU7.290e-1135.65Peregrin n=2 Tax=Papilio xuthus TaxID=66420 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig80328contigH-elongata_contig80328:524..2772 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score117.5
Seed ortholog evalue1.2e-23
Seed eggNOG ortholog2880.D8LEP1
KEGG koko:K02606,ko:K11797,ko:K11798
KEGG Pathwayko04110,ko04111,ko04113,map04110,map04111,map04113
KEGG ModuleM00284
GOsGO:0001932,GO:0001934,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006325,GO:0006355,GO:0006357,GO:0006606,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007010,GO:0007088,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007346,GO:0008104,GO:0008150,GO:0008284,GO:0008286,GO:0008360,GO:0009719,GO:0009725,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010564,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010799,GO:0010800,GO:0010941,GO:0015031,GO:0015833,GO:0016043,GO:0017038,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0022603,GO:0022604,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032868,GO:0032869,GO:0032870,GO:0033036,GO:0033043,GO:0033135,GO:0033138,GO:0033365,GO:0034097,GO:0034504,GO:0034613,GO:0038111,GO:0040008,GO:0042127,GO:0042221,GO:0042325,GO:0042327,GO:0042393,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043434,GO:0043567,GO:0043568,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045787,GO:0045840,GO:0045893,GO:0045931,GO:0045935,GO:0045937,GO:0045944,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051276,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0060255,GO:0060548,GO:0065007,GO:0065008,GO:0070013,GO:0070577,GO:0070727,GO:0070887,GO:0071310,GO:0071345,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0080090,GO:0090068,GO:0098760,GO:0098761,GO:0140030,GO:0140033,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237
EggNOG free text desc.regulation of cell shape
EggNOG OGsCOG2319@1,COG5141@1,KOG0644@2759,KOG0955@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03032,ko04121
Hectar predicted targeting categoryother localisation
Exons4
Model size1487
Cds size954
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig80328.15684.1prot_H-elongata_contig80328.15684.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig80328 524..1956 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931208.9534664-CDS-H-elongata_contig80328:523..13591622931208.9534664-CDS-H-elongata_contig80328:523..1359Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80328 524..1359 -
1691679742.392722-CDS-H-elongata_contig80328:523..13591691679742.392722-CDS-H-elongata_contig80328:523..1359Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80328 524..1359 -
1622931209.0014746-CDS-H-elongata_contig80328:1800..18591622931209.0014746-CDS-H-elongata_contig80328:1800..1859Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80328 1801..1859 -
1691679742.4159086-CDS-H-elongata_contig80328:1800..18591691679742.4159086-CDS-H-elongata_contig80328:1800..1859Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80328 1801..1859 -
1622931209.0155268-CDS-H-elongata_contig80328:1897..19561622931209.0155268-CDS-H-elongata_contig80328:1897..1956Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80328 1898..1956 -
1691679742.4344018-CDS-H-elongata_contig80328:1897..19561691679742.4344018-CDS-H-elongata_contig80328:1897..1956Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig80328 1898..1956 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931209.0345745-UTR-H-elongata_contig80328:1956..23441622931209.0345745-UTR-H-elongata_contig80328:1956..2344Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig80328 1957..2344 -
1691679742.4511654-UTR-H-elongata_contig80328:1956..23441691679742.4511654-UTR-H-elongata_contig80328:1956..2344Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig80328 1957..2344 -
1622931209.0548759-UTR-H-elongata_contig80328:2627..27721622931209.0548759-UTR-H-elongata_contig80328:2627..2772Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig80328 2628..2772 -
1691679742.4596624-UTR-H-elongata_contig80328:2627..27721691679742.4596624-UTR-H-elongata_contig80328:2627..2772Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig80328 2628..2772 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig80328.15684.1

>prot_H-elongata_contig80328.15684.1 ID=prot_H-elongata_contig80328.15684.1|Name=mRNA_H-elongata_contig80328.15684.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=318bp
MTKRKIRRMRRRRKRKTRRIDGALRSKRKRSPTARYIDEVYSASPRGAVT
RGRGRSSSGASGGAEGATSSRGSKRRRASSSNNRSYFYRDESEVEEEDED
QYEDQRGRDARASAERQHTVSNGGRVVNGSAFRAATANGVVAKSAGKGPA
VDNRAGGGGRSGGGSGSGSGGGSESASVEAYHGISPVIEEMLRHQGGVLE
RHGKRELILSFARQRWEEPPPPVEGNLRQVAENLLNLLTLIDEEGFFAEP
VTETAAPGYIAAILRPMDLGTMRRRAEGGAYDSMDMLQDDLVLVVANCLS
YNAPDTIFSEAAMSLARQ
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mRNA from alignment at H-elongata_contig80328:524..2772-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig80328.15684.1 ID=mRNA_H-elongata_contig80328.15684.1|Name=mRNA_H-elongata_contig80328.15684.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2249bp|location=Sequence derived from alignment at H-elongata_contig80328:524..2772- (Himanthalia elongata Himel1 dioecious)
ACGGGACCGGTTGTTGTTGGCCGTGAAGAATGTCGTCAACACGGATGACG
CGGCGCCGTTTGCCAAGCCCGTGGACGTGGAAAACTACCACGCGATCGTG
CCCGTGCCGATGGATCTTAGCCTCATCGTGCGCCGTCTAGAGAAGGTGAC
TTGACGAACCAAGAATTCTGTGATCGGTCGCGGTCCCGGAAGAGAGGAGA
AAAGGATCACTCGTCCAGAGGGGAACGAGCGTCCTGCTTGCCGCTGGTGA
AAAATATGTACCCCCCGTTACATCATTATAGAACAATAACGGATAAATCT
ACCTTGTGACCACGGGCTGGATTTTGACATCAGCTTATGTGAGAATTCAA
TCAATCAATAAAAACAAAATACGTCCTTTTCCCCGTGCTCTGCCTCCGCC
CTCCTTCCTGCCACCTCCACCTTTAAAGGATTACTACTGCTGCGTGGATG
CCGTGGAGTTCGACTGCAATCTAGTGTACGCCAACTGCACGAAGTATAAT
CGGCCGGGCTCGGAAATCGTCAAGCTCGCTTCTAGGGTCACAGACAGGCT
TGTACAAGCGATCAAGACCGTCACAGAGGGCGACGGTAACGGTAGCTGCA
GCAATGGTGGCAGCGGCAGCGGTGGGCTGTCTTTCGACCTCGACGGTGGG
GGAGGGAGCGCCAGCGGAGGCGGGGGGGGAGGCGTGGGAAGAAGCAACGG
CGCGATCTTTAGCGGCGCGGGACTGCGGTCGCGGCAGAGCTCCGGCGCGC
AACGGTTGTTGCTGAGCGCCGAGCAGAGAGAGGACGAGGAAGAGGAAGAG
GAAGAAGATCAGGAAGATGACGAAGAGGAAGATCAGGAGGATGAGGAGGA
GGAGGAAGAGGAAGACCAGGAGGATGAGGATGACGGTCATGAAGAATACG
AAGATGAGGAGGCTGATGGCGCGCTGAGAAGCAAGCGGAAGAGATCGCCA
ACGGCGCGCTACATTGACGAAGGTGAGGTAGGGTAGGGTAGGGTAGGGTA
GGAGGAACAAGTAAGAGAACGAATGTTTTGTCCTGGTGCGCGCCCCCTAT
CCATCCTTTTGTGAATTTAGTTTTTTTTGGTGGGGACAAGGCAGGTATAT
CATCCATCCAAACACAGAATCATCGACGAGATTACTCTTCGCGTTGAGAG
AAGGAGTTCCACACCAAACCAGATGCATGGTTCGATGTACCTTCAAAACG
AAACGGCCCGGAGTGCTTTTTTTTTGTTTACGCAGGGGTGCGCGAGCCTT
TTTGTAAGGGTGTCAAGGGGCTACCCGGCCCTTCCTCGTGAAAAATCCTT
GTAAAATCCGTGGCGATCCTAGGCATGCATCCGTTAGTGGTAATTCTAGG
GTCCCCGTTCGTGCCCGTGCATTGCGCCGTGATATTTCCGTCGTCATTTT
TTATTCGCGCCAGTCTACAGCGCGTCACCGAGGGGAGCTGTTACTCGAGG
ACGGGGGCGAAGTAGCAGCGGCGCCAGCGGTGGGGCGGAAGGCGCCACTT
CAAGCCGCGGGTCCAAGCGCCGACGGGCTTCGTCCTCCAACAACAGGAGC
TACTTTTACCGTGACGAGAGCGAGGTGGAAGAGGAAGACGAGGATCAGTA
CGAGGACCAGAGGGGGAGAGACGCGCGGGCGAGCGCAGAGAGGCAGCATA
CCGTGAGCAACGGGGGACGCGTGGTGAACGGCAGCGCCTTTCGAGCAGCA
ACAGCGAACGGCGTCGTCGCTAAATCAGCCGGTAAGGGACCAGCTGTGGA
CAATCGCGCCGGTGGTGGAGGAAGGAGCGGAGGTGGGAGCGGAAGCGGGA
GCGGGGGCGGGAGCGAAAGCGCGTCAGTCGAAGCTTATCACGGTATCAGC
CCCGTTATCGAAGAGATGCTGAGGCACCAGGGCGGCGTGCTGGAGAGACA
CGGCAAGCGGGAGCTTATCCTTAGTTTCGCCCGACAGCGATGGGAGGAAC
CACCCCCGCCGGTCGAAGGAAACCTCCGCCAGGTGGCCGAGAACCTGTTG
AATTTGCTCACGCTGATCGACGAGGAGGGGTTCTTCGCCGAGCCGGTCAC
CGAGACCGCCGCCCCCGGTTACATCGCCGCCATCCTGCGGCCGATGGATC
TAGGGACAATGAGAAGACGCGCGGAAGGTGGCGCCTACGATTCGATGGAT
ATGCTGCAGGACGATCTCGTTCTGGTCGTGGCGAACTGCCTGTCGTACAA
CGCTCCGGACACGATCTTCTCCGAGGCTGCGATGAGCCTTGCGAGGCAA
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Coding sequence (CDS) from alignment at H-elongata_contig80328:524..2772-

>mRNA_H-elongata_contig80328.15684.1 ID=mRNA_H-elongata_contig80328.15684.1|Name=mRNA_H-elongata_contig80328.15684.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1908bp|location=Sequence derived from alignment at H-elongata_contig80328:524..2772- (Himanthalia elongata Himel1 dioecious)
ATGACGAAGAGGAAGATCAGGAGGATGAGGAGGAGGAGGAAGAGGAAGAC
CAGGAGGATATGACGAAGAGGAAGATCAGGAGGATGAGGAGGAGGAGGAA
GAGGAAGACCAGGAGGATTGATGGCGCGCTGAGAAGCAAGCGGAAGAGAT
CGCCAACGGCGCGCTACATTGACGAAGTGATGGCGCGCTGAGAAGCAAGC
GGAAGAGATCGCCAACGGCGCGCTACATTGACGAAGTCTACAGCGCGTCA
CCGAGGGGAGCTGTTACTCGAGGACGGGGGCGAAGTAGCAGCGGCGCCAG
CGGTGGGGCGGAAGGCGCCACTTCAAGCCGCGGGTCCAAGCGCCGACGGG
CTTCGTCCTCCAACAACAGGAGCTACTTTTACCGTGACGAGAGCGAGGTG
GAAGAGGAAGACGAGGATCAGTACGAGGACCAGAGGGGGAGAGACGCGCG
GGCGAGCGCAGAGAGGCAGCATACCGTGAGCAACGGGGGACGCGTGGTGA
ACGGCAGCGCCTTTCGAGCAGCAACAGCGAACGGCGTCGTCGCTAAATCA
GCCGGTAAGGGACCAGCTGTGGACAATCGCGCCGGTGGTGGAGGAAGGAG
CGGAGGTGGGAGCGGAAGCGGGAGCGGGGGCGGGAGCGAAAGCGCGTCAG
TCGAAGCTTATCACGGTATCAGCCCCGTTATCGAAGAGATGCTGAGGCAC
CAGGGCGGCGTGCTGGAGAGACACGGCAAGCGGGAGCTTATCCTTAGTTT
CGCCCGACAGCGATGGGAGGAACCACCCCCGCCGGTCGAAGGAAACCTCC
GCCAGGTGGCCGAGAACCTGTTGAATTTGCTCACGCTGATCGACGAGGAG
GGGTTCTTCGCCGAGCCGGTCACCGAGACCGCCGCCCCCGGTTACATCGC
CGCCATCCTGCGGCCGATGGATCTAGGGACAATGAGAAGACGCGCGGAAG
GTGGCGCCTACGATTCGATGGATATGCTGCAGGACGATCTCGTTCTGGTC
GTGGCGAACTGCCTGTCGTACAACGCTCCGGACACGATCTTCTCCGAGGC
TGCGATGAGCCTTGCGAGGCAATCTACAGCGCGTCACCGAGGGGAGCTGT
TACTCGAGGACGGGGGCGAAGTAGCAGCGGCGCCAGCGGTGGGGCGGAAG
GCGCCACTTCAAGCCGCGGGTCCAAGCGCCGACGGGCTTCGTCCTCCAAC
AACAGGAGCTACTTTTACCGTGACGAGAGCGAGGTGGAAGAGGAAGACGA
GGATCAGTACGAGGACCAGAGGGGGAGAGACGCGCGGGCGAGCGCAGAGA
GGCAGCATACCGTGAGCAACGGGGGACGCGTGGTGAACGGCAGCGCCTTT
CGAGCAGCAACAGCGAACGGCGTCGTCGCTAAATCAGCCGGTAAGGGACC
AGCTGTGGACAATCGCGCCGGTGGTGGAGGAAGGAGCGGAGGTGGGAGCG
GAAGCGGGAGCGGGGGCGGGAGCGAAAGCGCGTCAGTCGAAGCTTATCAC
GGTATCAGCCCCGTTATCGAAGAGATGCTGAGGCACCAGGGCGGCGTGCT
GGAGAGACACGGCAAGCGGGAGCTTATCCTTAGTTTCGCCCGACAGCGAT
GGGAGGAACCACCCCCGCCGGTCGAAGGAAACCTCCGCCAGGTGGCCGAG
AACCTGTTGAATTTGCTCACGCTGATCGACGAGGAGGGGTTCTTCGCCGA
GCCGGTCACCGAGACCGCCGCCCCCGGTTACATCGCCGCCATCCTGCGGC
CGATGGATCTAGGGACAATGAGAAGACGCGCGGAAGGTGGCGCCTACGAT
TCGATGGATATGCTGCAGGACGATCTCGTTCTGGTCGTGGCGAACTGCCT
GTCGTACAACGCTCCGGACACGATCTTCTCCGAGGCTGCGATGAGCCTTG
CGAGGCAA
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