mRNA_H-elongata_contig8030.15682.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig8030.15682.1
Unique NamemRNA_H-elongata_contig8030.15682.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig8030.15682.1 vs. uniprot
Match: D8LC67_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC67_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 1.660e-51
Identity = 89/156 (57.05%), Postives = 110/156 (70.51%), Query Frame = 2 
Query:  365 VTSCPVCGKRVRADICSLHLDTDCSGVSCTPLPSDKGGVAWAGDAGNRKRMVNQDISSEGAKAEGEQGGGGKETSATAEGLMALAAELTCPVCLCLFEDAHVLPCSHRFCLECINGCFRSTKKQECPLCKVPAWKRDLKRDVPLRNILLAYRRMTS 832
            +T+CPVCG++V+AD+CSLHLDTDCSG        D+ G    G+A + K +  +D  SE                  A GL ALAAELTCP+CLC+FEDAH LPCSHRFCLECI GCF+S+K+QECPLCK+PAWKRDL RDV ++NI+ AYRRM +
Sbjct:    1 MTTCPVCGEQVQADLCSLHLDTDCSGGGRKEEVRDEVGSGNGGEADSGKTVPKRDTGSE-----------------AAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKIPAWKRDLTRDVSIQNIIAAYRRMAA 139
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BLAST of mRNA_H-elongata_contig8030.15682.1 vs. uniprot
Match: A0A6H5KLF7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF7_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 1.550e-48
Identity = 93/164 (56.71%), Postives = 115/164 (70.12%), Query Frame = 2 
Query:  362 AVTSCPVCGKRVRADICSLHLDTDCSGVSCTPLPS-------DKGGVAWAGDAGNRKRMVNQDISSEGAKAEGEQGGGGKETSATAEGLMALAAELTCPVCLCLFEDAHVLPCSHRFCLECINGCFRSTKKQECPLCKVPAWKRDLKRDVPLRNILLAYRRMTS 832
            A+T+CPVCGK+++AD+CSLHLDTDCSGV  TP          D+ G    G+A + K +  +D+ SE                  A GL ALAAELTCP+CLC+FEDAH LPCSHRFCLECI GCF+S+K+QECPLCK+PAWKRDL RDV ++NI+ AYRRM +
Sbjct:  317 AMTACPVCGKQIQADLCSLHLDTDCSGV--TPSGGGLKEEVRDEVGSGNGGEADSGKAVPKKDVGSE-----------------AAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKIPAWKRDLTRDVSIQNIIAAYRRMAA 461
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BLAST of mRNA_H-elongata_contig8030.15682.1 vs. uniprot
Match: A0A8J5XEH0_DIALT (RING-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEH0_DIALT)

HSP 1 Score: 79.7 bits (195), Expect = 5.350e-12
Identity = 42/91 (46.15%), Postives = 54/91 (59.34%), Query Frame = 2 
Query:  542 GAKAEGEQGGGGKETSATAEGL--MALAAELTCPVCLCLFEDAHVLPCSHRFCLECINGCFRSTKKQECPLCKVPAWKRDLKRDVPLRNIL 808
            GA    E GGG +   A A GL    L AEL C +CL  F+D H LPC H FCL CI     +T+  +CPLC+ PAW+R L+++  L NI+
Sbjct:  463 GAACAAEPGGGARALPA-ANGLPLACLEAELCCQICLATFDDPHSLPCQHTFCLSCIISHMVATRVNDCPLCRQPAWRRQLRKNHKLANIV 552
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BLAST of mRNA_H-elongata_contig8030.15682.1 vs. uniprot
Match: UPI0007BA9366 (LOW QUALITY PROTEIN: zinc-binding protein A33-like n=1 Tax=Poecilia formosa TaxID=48698 RepID=UPI0007BA9366)

HSP 1 Score: 63.5 bits (153), Expect = 9.780e-9
Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 2 
Query:  623 ELTCPVCLCLFEDAHVLPCSHRFCLECINGCFRSTKKQECPLCKVPAWKRDLKRDVPLRNILLAYRR 823
            +L CPVCL +F++  +L CSH FC EC+  C+R    +ECP+CK  + K D   ++ L+N+ L   R
Sbjct:    8 DLCCPVCLEIFKNPVILSCSHSFCKECLEKCWREKPVRECPVCKRRSSKADPLCNLALKNLCLLQER 74
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BLAST of mRNA_H-elongata_contig8030.15682.1 vs. uniprot
Match: A0A8D2JAN2_VARKO (RING-type domain-containing protein n=1 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2JAN2_VARKO)

HSP 1 Score: 62.8 bits (151), Expect = 2.010e-8
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 2 
Query:  614 LAAELTCPVCLCLFEDAHVLPCSHRFCLECINGCF--RSTKKQECPLCKVPAWKRDLKRDVPLRNI 805
            +A +L CP+CL +F+D H+L CSH FC  C+  CF  +   K  CP C+ P   +D  R+  L N+
Sbjct:   10 IAEDLLCPICLSIFQDPHMLACSHNFCFSCLESCFTAKGQHKGLCPECRAPFDLQDAVRNRVLSNL 75
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BLAST of mRNA_H-elongata_contig8030.15682.1 vs. uniprot
Match: A0A3Q3EGQ7_9LABR (Zinc-binding protein A33-like n=3 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3EGQ7_9LABR)

HSP 1 Score: 66.2 bits (160), Expect = 6.840e-8
Identity = 28/47 (59.57%), Postives = 33/47 (70.21%), Query Frame = 2 
Query:  614 LAAELTCPVCLCLFEDAHVLPCSHRFCLECINGCFRSTKKQECPLCK 754
            L  +LTCPVCLC+F D  +LPCSH FC EC+ G  +  KK  CPLCK
Sbjct:   16 LQKDLTCPVCLCIFRDPVLLPCSHSFCRECLQGALKRNKK--CPLCK 60
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BLAST of mRNA_H-elongata_contig8030.15682.1 vs. uniprot
Match: A0A4W3GZY8_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GZY8_CALMI)

HSP 1 Score: 62.0 bits (149), Expect = 1.760e-7
Identity = 29/64 (45.31%), Postives = 36/64 (56.25%), Query Frame = 2 
Query:  614 LAAELTCPVCLCLFEDAHVLPCSHRFCLECINGCFRSTKKQECPLCKVPAWKRDLKRDVPLRNI 805
            LA +LTCPVCL LF D   L C H FC  CI GC+   +   CP C+     R+L+   PL N+
Sbjct:   10 LAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQEAHSCPECRRACPGRELRASRPLANL 73
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BLAST of mRNA_H-elongata_contig8030.15682.1 vs. uniprot
Match: A0A096M6X6_POEFO (Uncharacterized protein n=1 Tax=Poecilia formosa TaxID=48698 RepID=A0A096M6X6_POEFO)

HSP 1 Score: 63.5 bits (153), Expect = 2.040e-7
Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 2 
Query:  623 ELTCPVCLCLFEDAHVLPCSHRFCLECINGCFRSTKKQECPLCKVPAWKRDLKRDVPLRNILLAYRR 823
            +L CPVCL +F++  +L CSH FC EC+  C+R    +ECP+CK  + K D   ++ L+N+ L   R
Sbjct:   19 DLCCPVCLEIFKNPVILSCSHSFCKECLEKCWREKPVRECPVCKRRSSKADPLCNLALKNLCLLQER 85
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BLAST of mRNA_H-elongata_contig8030.15682.1 vs. uniprot
Match: UPI001C3FC9B5 (nuclear factor 7, brain-like n=1 Tax=Callorhinchus milii TaxID=7868 RepID=UPI001C3FC9B5)

HSP 1 Score: 62.0 bits (149), Expect = 3.190e-7
Identity = 29/64 (45.31%), Postives = 36/64 (56.25%), Query Frame = 2 
Query:  614 LAAELTCPVCLCLFEDAHVLPCSHRFCLECINGCFRSTKKQECPLCKVPAWKRDLKRDVPLRNI 805
            LA +LTCPVCL LF D   L C H FC  CI GC+   +   CP C+     R+L+   PL N+
Sbjct:   10 LAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQETHSCPECRRACPGRELRASRPLANL 73
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BLAST of mRNA_H-elongata_contig8030.15682.1 vs. uniprot
Match: A0A668RXN3_OREAU (Uncharacterized protein n=1 Tax=Oreochromis aureus TaxID=47969 RepID=A0A668RXN3_OREAU)

HSP 1 Score: 61.2 bits (147), Expect = 6.240e-7
Identity = 25/66 (37.88%), Postives = 42/66 (63.64%), Query Frame = 2 
Query:  608 MALAAELTCPVCLCLFEDAHVLPCSHRFCLECINGCFRSTKKQECPLCKVPAWKRDLKRDVPLRNI 805
            MA  ++L CPVCL +F+D  +LPCSH FC +C++  +R     +CP+C+  +   D   ++ L+N+
Sbjct:   17 MAARSDLCCPVCLDIFKDPVLLPCSHSFCKDCLDSWWRKNPAHDCPVCQKQSTMHDPPCNLALKNL 82
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8030.15682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC67_ECTSI1.660e-5157.05RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KLF7_9PHAE1.550e-4856.71RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A8J5XEH0_DIALT5.350e-1246.15RING-type domain-containing protein n=1 Tax=Diacro... [more]
UPI0007BA93669.780e-941.79LOW QUALITY PROTEIN: zinc-binding protein A33-like... [more]
A0A8D2JAN2_VARKO2.010e-840.91RING-type domain-containing protein n=1 Tax=Varanu... [more]
A0A3Q3EGQ7_9LABR6.840e-859.57Zinc-binding protein A33-like n=3 Tax=Labrus bergy... [more]
A0A4W3GZY8_CALMI1.760e-745.31Uncharacterized protein n=1 Tax=Callorhinchus mili... [more]
A0A096M6X6_POEFO2.040e-741.79Uncharacterized protein n=1 Tax=Poecilia formosa T... [more]
UPI001C3FC9B53.190e-745.31nuclear factor 7, brain-like n=1 Tax=Callorhinchus... [more]
A0A668RXN3_OREAU6.240e-737.88Uncharacterized protein n=1 Tax=Oreochromis aureus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8030contigH-elongata_contig8030:5418..8684 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score82.4
Seed ortholog evalue1.4e-13
Seed eggNOG ortholog2903.EOD19848
EggNOG free text desc.zinc ion binding
EggNOG OGsKOG2177@1,KOG2177@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-20_004640.1
Exons4
Model size1602
Cds size321
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8030.15682.1prot_H-elongata_contig8030.15682.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig8030 6089..7917 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931208.7323594-UTR-H-elongata_contig8030:5417..56891622931208.7323594-UTR-H-elongata_contig8030:5417..5689Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8030 5418..5689 +
1691679742.264941-UTR-H-elongata_contig8030:5417..56891691679742.264941-UTR-H-elongata_contig8030:5417..5689Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8030 5418..5689 +
1622931208.747536-UTR-H-elongata_contig8030:5846..60881622931208.747536-UTR-H-elongata_contig8030:5846..6088Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8030 5847..6088 +
1691679742.2774756-UTR-H-elongata_contig8030:5846..60881691679742.2774756-UTR-H-elongata_contig8030:5846..6088Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8030 5847..6088 +
1622931208.8126466-UTR-H-elongata_contig8030:7917..86841622931208.8126466-UTR-H-elongata_contig8030:7917..8684Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8030 7918..8684 +
1691679742.320415-UTR-H-elongata_contig8030:7917..86841691679742.320415-UTR-H-elongata_contig8030:7917..8684Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8030 7918..8684 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931208.7680612-CDS-H-elongata_contig8030:6088..62161622931208.7680612-CDS-H-elongata_contig8030:6088..6216Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8030 6089..6216 +
1691679742.2860267-CDS-H-elongata_contig8030:6088..62161691679742.2860267-CDS-H-elongata_contig8030:6088..6216Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8030 6089..6216 +
1622931208.7832887-CDS-H-elongata_contig8030:6518..66301622931208.7832887-CDS-H-elongata_contig8030:6518..6630Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8030 6519..6630 +
1691679742.2940257-CDS-H-elongata_contig8030:6518..66301691679742.2940257-CDS-H-elongata_contig8030:6518..6630Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8030 6519..6630 +
1622931208.8001394-CDS-H-elongata_contig8030:7836..79171622931208.8001394-CDS-H-elongata_contig8030:7836..7917Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8030 7837..7917 +
1691679742.3039243-CDS-H-elongata_contig8030:7836..79171691679742.3039243-CDS-H-elongata_contig8030:7836..7917Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8030 7837..7917 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig8030.15682.1

>prot_H-elongata_contig8030.15682.1 ID=prot_H-elongata_contig8030.15682.1|Name=mRNA_H-elongata_contig8030.15682.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
MVNQDISSEGAKAEGEQGGGGKETSATAEGLMALAAELTCPVCLCLFEDA
HVLPCSHRFCLECINGCFRSTKKQECPLCKVPAWKRDLKRDVPLRNILLA
YRRMTS*
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mRNA from alignment at H-elongata_contig8030:5418..8684+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig8030.15682.1 ID=mRNA_H-elongata_contig8030.15682.1|Name=mRNA_H-elongata_contig8030.15682.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3267bp|location=Sequence derived from alignment at H-elongata_contig8030:5418..8684+ (Himanthalia elongata Himel1 dioecious)
AGGTTGTCATCGAGCTGTGTAGCAAGCATTTGGATACAGAATGCCGCGGA
CCGAATCTGGGAAGCAGTGGCGCCGACAGCCGTAAAGTCAGCACTAGGAC
CGCTGGCGCGTCGAAAAGTCCCCCTCCGTCAACTACTGTCGGCGAAGCGG
CGAGAACGCCTCTCGCATTCAAGAAATCGCCAGCAATGGTCACTCCATCC
GACAAATTTGCGAGCCCCGGATCGCCCAAGCGCGTGTCGCTCCGTGCAGC
GGCATGTAGCAAAGCAGCCCACAGCACCGACTACTCGGCAGCAGCCCCGA
TTGGATCGTCCCCAGGAACAATGTCCTGCGGAGAAGATAGCCTCGAGGAG
GATTTCACGGGGCGACCACGGAACAAAGCCGGCCGCGTTCAAGCCGAGGG
TGGGTCACCTCCTCCGGCTTCTGTGATCGGTACCACCCGCCTTAACCCGC
CACCAGCTTTGCGAAGACGGATTGTGTGCGACTCTTCGGCGGTCTCGGCG
ACGTCTTCGGAATTGCCGGCTGTAACGTCGTGCCCGGTGTGTGGAAAACG
CGTCCGTGCTGACATCTGCAGCTTACATCTCGATACGGATTGCTCCGGTG
TTAGTTGCACCCCTTTACCAAGCGACAAGGGCGGGGTAGCTTGGGCTGGG
GATGCCGGCAATAGGAAAAGGATGGTAAATCAGGACATCTCTTCGGAAGG
TGCCAAAGCGGAGGGAGAGCAAGGCGGAGGAGGCAAGGAGACCAGCGCAA
CGGCTGAAGGGTTAATGGCGCTTGCTGCCGAGCTCACGTGTCCCGTTTGG
TGAGTCGTCCGACACGTTTGCGATGGAAGATTGCGTGGGAAGCGAATATT
TTAATGGTGCGACATTCATGAAAGCGGCCTTCCTGCTTTAAACTGAAATT
GAAAGCCTTTTGCAAGAGGTGTTATGAGGCAGGTCCCAGCTTTTGGCTAA
ACACAGCTAAGCCTGCTGCTGATCGTATCAAGGGCCCTTGAGAAGGTGGC
GCGGATCTTTGAACACTTTGCGTCTCGTGAAGCGGGGATCTTAGTCGAAA
CCGTATTGATCAATCCCACCCTTCCCTTCGCCTTACTCAATGACGTCACA
GCTTGTGTCTATTCGAGGATGCCCATGTTCTGCCGTGCAGCCATCGCTTT
TGTTTGGAGTGCATTAACGGCTGCTTCCGCTCCACCAAAAAGCAAGAATG
TCCCTTGTGCAAGGTAAGGGCTAATAACTTGTTGTCCTGCATGGTGCTTG
TTGCGCTTGAGTGATGCCGAGGACACTGTGATCGCTTTTGTTTGAGCCAG
TCCTATCCTTGGTGCACTTGACCCGCTCACGTGCCCAGAATTTCCCAGCG
CACCCCGCACGGTTCAATATCTTGACGTAATCCACGTAATGCTTAGATTA
CCACTTCTCAACGAAAGAAAGGATTACCTCTAGATAGGCACCTGCGATGC
TTAGGTAGGCTTTTTAAACACACACACGCACATACATACACAACCTGGCT
AGCCTCAGGGTCGGGAAGGAAGAAACGATAACAGGGACGGGGATAAAGAC
GGCGATGGGAATGGTAACGATAACGGGGACGGGGACGGAAGATGAGGATG
GTAAAGTGGATGAGGATAGAGACGAAGATAGGGTTAAGGACGAGGATGGA
GACTTGGGAAGGAACGAGGATGGGGATAGGGACGGAGACGGGGATAAGGA
TGGGGATGTGGACTAAAACGGGAGCGGAGATAGGAACAGGATCGGGGAAT
GGGGAGGAGACGGGAACGCGAACGGAGAAGAGGGTAGGTGGGAAAGAGAG
TCCGTTTAAGGGGTAGAACACTTGGGGAGAAAGGCGCGAGCGAGGGGGTG
TCGCCAACGGGTAACCTGTTTCCACAGCCGTAAGACCCGACGCCTCAGCG
TGAACGTCGGGGAATGCGGATAACCAAAGCTAAGGGGCGGGATCGGGGAG
GGGAGAGAAAAGGAGAGTCGAAGAAGCGTAAGACGGTGGAAAACGGGGGA
GATTTGGGTAGCAGTAATAAAAACCGAAGACGAGAGATCGTTGGTCCATT
AAGGGCCAACCGAAGCTATATACCGCTAGCAAACAAGGAAGCAGAGAGGG
AAGCGCAAGGTACTGAGGGCTTAAATATGAACGGTAGAGAGAGTGCGTCC
TCTTTGTCACATCTAATCAGATTTTTTGTAGCAAATATAATTGATCTCCC
ATTGGGAGGAGGATCAATGTGTGTAGCCTAGAATGGCTAGCATGACAGGG
CCGGATTGCACGGTTATGTAATTTAATAAACACAAACTAACATATCTAAA
ACGCTCGTCACCAAGAAAGCTAGCGAAGTACCCACAACTGCCTTGGCGCT
TGCCCACATGCGCATCAGAACCCGCCCGGACGTCCTCTCATATATGTGTA
ACGTTCATGGTGCATGCAGGTGCCAGCGTGGAAACGGGACCTCAAGCGGG
ACGTGCCGCTGCGAAACATTCTCCTCGCCTACCGCCGTATGACTTCGTAG
CTGGCCAAAGCTGTGCATCCGGCCATCCTAGTCTCTTCCTCTCTGCAATT
CCATATAATTTTTAACGATAGGCATGTTACGAAGGAGAGGGAGTGGGTGT
TCCCAACGATAGGTAGCTCACGATTTTTTTACGGAAAAAATACCACGTGT
ATCTCAGTAGTCGACCTGTTTTGCATAACTGACTCCGCTTTCGAACGAGT
AAGAGCTTGACAGGGTATGTTTGTATGGTCATCACACATAGCAGAGAAAG
TTAGATCAAACGGATTTGGTTTGCCTTCTGCTCGTGGTCAGCTGAAAAGG
GAATATTGTTTCCCTTTCTCCCAGTTTGCGCCTGATAATTTGGTTTGCGA
GACGGGTTTAGCAGTCCCGTCCCGCGTAAGCCTGCTCGTTCTCACAACCC
AGGTTAATTGGGTTGATCCCTTAAGAGGGTTTCCATAGGCGAGATACTAA
ACTAATGCTGCAGTAAATGGGATTAGAAATATAGCATGTTGAATGATACC
CCATCGGAGTAAAATGATATTTTTACTAAGGTAGCTCTATAGTCATTTTA
AGATAAATACCCGTAGGGTTTTTAGCTGGAGCAAATATACTCATTTATGT
GCCCGAGACGCCAGCCGTGCGAGGTCGGCAAACTATATGTCATGACAAAT
GGGTACGCGACAAATGGATGAATAGTGAAAATTACCGTCTCTTCAGGCGG
CCTGTCCGGGACTATGGAGGAGTAGAGCGAGCGAGTGCAGCAATGTAGAA
AGCACAAGATAAACGAC
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Coding sequence (CDS) from alignment at H-elongata_contig8030:5418..8684+

>mRNA_H-elongata_contig8030.15682.1 ID=mRNA_H-elongata_contig8030.15682.1|Name=mRNA_H-elongata_contig8030.15682.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=642bp|location=Sequence derived from alignment at H-elongata_contig8030:5418..8684+ (Himanthalia elongata Himel1 dioecious)
ATGGTAAATCAGGACATCTCTTCGGAAGGTGCCAAAGCGGAGGGAGAGCA
AGGCGGAGGAGGCAAGGAGACCAGCGCAACGGCTGAAGGGTTAATGGCGC
TTGCTGCCGAGCTCACGTGTCCCGTTTGATGGTAAATCAGGACATCTCTT
CGGAAGGTGCCAAAGCGGAGGGAGAGCAAGGCGGAGGAGGCAAGGAGACC
AGCGCAACGGCTGAAGGGTTAATGGCGCTTGCTGCCGAGCTCACGTGTCC
CGTTTGCTTGTGTCTATTCGAGGATGCCCATGTTCTGCCGTGCAGCCATC
GCTTTTGTTTGGAGTGCATTAACGGCTGCTTCCGCTCCACCAAAAAGCAA
GAATGTCCCTTGTGCAAGCTTGTGTCTATTCGAGGATGCCCATGTTCTGC
CGTGCAGCCATCGCTTTTGTTTGGAGTGCATTAACGGCTGCTTCCGCTCC
ACCAAAAAGCAAGAATGTCCCTTGTGCAAGGTGCCAGCGTGGAAACGGGA
CCTCAAGCGGGACGTGCCGCTGCGAAACATTCTCCTCGCCTACCGCCGTA
TGACTTCGTAGGTGCCAGCGTGGAAACGGGACCTCAAGCGGGACGTGCCG
CTGCGAAACATTCTCCTCGCCTACCGCCGTATGACTTCGTAG
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