mRNA_H-elongata_contig80212.15674.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig80212.15674.1 vs. uniprot
Match: W7TU72_9STRA (Pfkb-like carbohydrate kinase family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU72_9STRA) HSP 1 Score: 151 bits (382), Expect = 8.380e-41 Identity = 87/194 (44.85%), Postives = 117/194 (60.31%), Query Frame = 1
Query: 1 RDVPVVLDAEKDRPHLKDLLPLADYIICNRHFPSAFTGSDDREVAICQLLGQGRARLVATTLGADGCIVEEQPWHGYGDLSLPLGCPMGVKTAVRSEDGADIPADTRQ----ARGSSFRYMWAPSWPVQSSEIVDTTGAGDCFIAGFMYGMTHRLGISRTLALASYVSAKKLHQPGARQGVP---TL-AQLQQE 558
R +PV+LDAEKDRPHL++L+PL D++ N FP AFTG+ E + +LL GRARLV TTLGA G +V P G G + R+ + + +TR + G + + +WPV +IVDTTGAGD FIAG +YG+ H L + L LA +V+A+KL PGARQG+P TL A+LQ+E
Sbjct: 203 RGIPVMLDAEKDRPHLRELVPLCDFLATNAVFPKAFTGAASTEEGMARLLDMGRARLVFTTLGAKGSMVMGLPSEMIGGKRGGDGNEK-ERREPRAGEALPLATETRSYACPSTGLALTLVRCDAWPVLPEDIVDTTGAGDAFIAGLIYGLVHSLSVPHMLNLAGFVAAQKLQAPGARQGLPRRETLPARLQEE 395
BLAST of mRNA_H-elongata_contig80212.15674.1 vs. uniprot
Match: D8LFD0_ECTSI (2-keto-3-deoxygluconate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFD0_ECTSI) HSP 1 Score: 136 bits (342), Expect = 3.790e-38 Identity = 61/82 (74.39%), Postives = 74/82 (90.24%), Query Frame = 1
Query: 343 RYMWAPSWPVQSSEIVDTTGAGDCFIAGFMYGMTHRLGISRTLALASYVSAKKLHQPGARQGVPTLAQLQQEWPGLLLPSYK 588
RY+WA +WP+++S+IVDTTGAGDCFIAGF+YGMTHRLGI+RTLA+ASYV+AKKL PGARQGVPT +QLQ + PGLL P +K
Sbjct: 21 RYVWASAWPIEASDIVDTTGAGDCFIAGFIYGMTHRLGIARTLAVASYVAAKKLSLPGARQGVPTFSQLQADSPGLLSPDWK 102
BLAST of mRNA_H-elongata_contig80212.15674.1 vs. uniprot
Match: A0A7J7IJF7_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJF7_9RHOD) HSP 1 Score: 119 bits (299), Expect = 2.620e-28 Identity = 73/197 (37.06%), Postives = 106/197 (53.81%), Query Frame = 1
Query: 1 RDVPVVLDAEKDRPHLKDLLPLADYIICNRHFPSAFTGSDDRE-------VAICQLLGQGRARLVATTLGADGCIVEEQPWHGYGDLS-LPLGCPM------GVKTAVRSEDGADIPADTRQARGSSFRYMWAPSWPVQSSEIVDTTGAGDCFIAGFMYGMTHRLGISRTLALASYVSAKKLHQPGARQGVPTLAQL 549
R +P++LD EKDRP+ +LL LADYI+ N +P F G + +L GRA+ V T G +G ++ +Q S P G G+ VRS+ P + A + + P+WP S IVDTTGAGD +IAG +YG+ HR+ + +A+A++V+A+KL PGAR G+PTL Q+
Sbjct: 255 RGIPIMLDIEKDRPYALELLSLADYIVTNATYPLKFKGQPGETSHHLSILTGLVAMLEYGRAQFVIGTQGEEGSLMVQQKRRPSPSSSNQPEGADAEPQSLAGLPILVRSDTYP--PQSSCSACEPPYSILRCPAWP-PSRPIVDTTGAGDAYIAGIIYGLLHRMEPAHMMAIAAFVAAEKLTAPGARSGLPTLEQI 448
BLAST of mRNA_H-elongata_contig80212.15674.1 vs. uniprot
Match: A0A7S3ENN4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENN4_9RHOD) HSP 1 Score: 115 bits (289), Expect = 1.360e-27 Identity = 71/186 (38.17%), Postives = 100/186 (53.76%), Query Frame = 1
Query: 1 RDVPVVLDAEKDRPHLKDLLPLADYIICNRHFPSAFTGSDDREVAICQLLGQGRARLVATTLGADGCIVEEQPWHGYGDLSLPLGCPMGVKTAVRSEDGADIPADTRQARGSSFRYMWAPSWPVQSSEIVDTTGAGDCFIAGFMYGMTHRLGISRTLALASYVSAKKLHQPGARQGVPTLAQLQQE 558
R VP+ LD EKDRPH+++LLPLAD+II N+ +P+ F +D + LL GRA+ V TTLGADG + L C K D AD+ + + + P+ V +VD+TGAGD FI G +Y + L + + L L+S V++ KL QPGAR+G+P + QE
Sbjct: 180 RGVPISLDVEKDRPHIRELLPLADFIITNQRYPTVF--GEDVYRGMHTLLRLGRAKFVVTTLGADGSL---------------LMC----KGNAGDHDSADLDLNVMEFEDEQAVLIRCPAEKVH--HVVDSTGAGDAFIGGIIYSLVSALPLWKMLKLSSRVASLKLGQPGARKGLPLRPSMDQE 342
BLAST of mRNA_H-elongata_contig80212.15674.1 vs. uniprot
Match: M1V792_CYAM1 (Similar to ketohexokinase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V792_CYAM1) HSP 1 Score: 115 bits (289), Expect = 6.260e-27 Identity = 74/194 (38.14%), Postives = 107/194 (55.15%), Query Frame = 1
Query: 1 RDVPVVLDAEKDRPHLKDLLPLADYIICNRHFPSAFTG----SDDREVAICQLLG---QGRARLVATTLGADGCIVEEQPWHGYGDLSL----PLGCPMGVKTAVRSEDGADIPADTRQARGSSFRYMWAPSWPVQSSEIVDTTGAGDCFIAGFMYGMTHRLGISRTLALASYVSAKKLHQPGARQGVPTLAQL 549
R +PVVLD EKDRPH DL+ LADYII N +P F+ S +R A+ L+ GRA +T GA+G ++ + + G +L P G+ V+S+ PA + + + P+WP+ S +VDTTGAGD +IAG +Y + H L + +AL S+V+A+KL PGAR +P L Q+
Sbjct: 254 RGIPVVLDIEKDRPHALDLVALADYIITNATYPLHFSAQPGMSANRLTALSGLVAIMDYGRAAFAISTQGAEGSLMVRRRHNVDGLYALGHETEEPAPTGLPILVQSDTYP--PATACGSCEPQYDVLRCPAWPL-SRPVVDTTGAGDAYIAGVIYALLHGLSDGQAMALGSFVAAEKLAGPGARSALPRLEQV 444
BLAST of mRNA_H-elongata_contig80212.15674.1 vs. uniprot
Match: A0A5J4Z8Y0_PORPP (Ribokinase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8Y0_PORPP) HSP 1 Score: 112 bits (281), Expect = 6.060e-26 Identity = 71/189 (37.57%), Postives = 102/189 (53.97%), Query Frame = 1
Query: 1 RDVPVVLDAEKDRPHLKDLLPLADYIICNRHFPSAFT-GSDDREVAICQLLGQ-GRARLVATTLGADGCIVEEQ--PWHGYGDLSLPLGCPMGVKTAVRSEDGADIPADTRQARGSSFRYMWAPSWPVQSS-EIVDTTGAGDCFIAGFMYGMTHRLGISRTLALASYVSAKKLHQPGARQGVPTLAQLQ 552
R +PVVLD EKDRPH+++LLPL DYI+ N +P F+ S R AI +LL R + V TT GA+G + + P D L P+ + + PA R + + P WP+ +S IVD+TGAGD FI G YG+ L + R + L S V++ KL + GAR G+P ++++
Sbjct: 232 RGIPVVLDVEKDRPHIRELLPLVDYIVTNAKYPLLFSPDSLGRRDAISKLLESCERVKFVLTTNGAEGSTMMRKLHPDDAQKDRDLLDEGPV-----MPTHTTWPPPAQCRDKCDLKYAVVMCPCWPIPASLRIVDSTGAGDAFIGGVCYGLLTGLSVERMMLLGSRVASAKLTKVGARAGIPRQSEIE 415
BLAST of mRNA_H-elongata_contig80212.15674.1 vs. uniprot
Match: R7QG38_CHOCR (PfkB domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG38_CHOCR) HSP 1 Score: 111 bits (277), Expect = 1.400e-25 Identity = 68/179 (37.99%), Postives = 101/179 (56.42%), Query Frame = 1
Query: 1 RDVPVVLDAEKDRPHLKDLLPLADYIICNRHFPSAFT-GSDDREVAICQLLGQGRARLVATTLGADGCIVEEQPWHGYGDLSLPLGCPMGVKTAVRSEDGADIPADTRQARGSSFRYMWAPSWPVQSSEIVDTTGAGDCFIAGFMYGMTHRLGISRTLALASYVSAKKLHQPGARQGVP 534
R +P++LD E++RP+++DLLP ADYI+ N +P F+ G+ + A+ LL A++V TTLG+ G I+ ++ D G M V++ V S+ + P+ PVQ +IVD+TGAGD FI G +YG+ + R L LAS V+AKKL + GAR G+P
Sbjct: 210 RGIPILLDVERERPYIRDLLPYADYIVTNSVYPFVFSPGATGKVDAMEMLLEACDAKMVITTLGSSGSIMVQRE----NDREKGNGFDMIVRSTVVQS----------HRNSKSYEVIKCPAQPVQ--KIVDSTGAGDAFIGGVIYGIVTNMSHERMLCLASRVAAKKLGEIGARAGLP 372
BLAST of mRNA_H-elongata_contig80212.15674.1 vs. uniprot
Match: M2W7G2_GALSU (PfkB-type carbohydrate kinase family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W7G2_GALSU) HSP 1 Score: 105 bits (263), Expect = 1.360e-23 Identity = 70/189 (37.04%), Postives = 101/189 (53.44%), Query Frame = 1
Query: 1 RDVPVVLDAEKDRPHLKDLLPLADYIICNRHFPSAFTGSDDREVAICQLLGQGRARLVATTLGADGCIV----EEQPWHGYGDLS-LPLGCPMGVKTAVRSEDGADIPADTRQARGSSFRYMWAPSWPVQSSEIVDTTGAGDCFIAGFMYGMTHRLGISRTLALASYVSAKKLHQPGARQGVPTLAQLQ 552
+ +P+VLD E+ R L++LL LADYII N FPS + G +R + +LL AR V +TLG +GC++ + +LS P+ M VKT +P R+ +R + P WPV+ +VDTTGAGD FI G +Y + H L AS V+A+KL GAR+G+ + L+
Sbjct: 198 KGIPIVLDVERRREGLENLLCLADYIITNAEFPSEYFGQLNRLNGLEKLLDAYPARWVISTLGKEGCVMMSRLDSDREEKTANLSHFPI---MAVKTTF------PLPTPCRECL-PKYRLIDCPCWPVE--RVVDTTGAGDAFIGGIIYAILHHFDQEHMLYFASRVAAEKLSALGARKGLVYIDHLE 374
BLAST of mRNA_H-elongata_contig80212.15674.1 vs. uniprot
Match: A0A0L0G058_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G058_9EUKA) HSP 1 Score: 105 bits (262), Expect = 1.930e-23 Identity = 67/216 (31.02%), Postives = 110/216 (50.93%), Query Frame = 1
Query: 1 RDVPVVLDAEKDRPHLKDLLPLADYIICNRHFPSAFTG-SDDREVAICQLLGQGRARLVATTLGADGCIVEEQPWHGYGDLSLPLGCPMGVK-------------------------------TAVRSEDGADIPADTRQARGSSFRYMWAPSWP-VQSSEIVDTTGAGDCFIAGFMYGMTHRLGISRTLALASYVSAKKLHQPGARQGVPTLAQL 549
R +PV+LD E++R L+DL+PLADY++ N +P + S++R A+C LL + A++V TTLG+ G ++ + ++S G+K T+ + +PA T S+ ++ P V+ ++VDTTGAGD FI G +YG++ RL + L +A+ V+ KK+ + GAR G+PT +L
Sbjct: 164 RCIPVLLDVERERDGLQDLIPLADYLVTNTAYPQLYNPTSNNRVEAMCSLLLESNAKMVITTLGSAGSVLVVRKSECTSEVSEGCEEIYGLKVTSTFIHVTADESRRYVDMSNTKHTASNNNNTSTNTFTSETVPASTSHT-ASTLECIYVIECPAVEVEQVVDTTGAGDAFIGGIVYGLSARLTPAHMLVVAANVAGKKIGEMGARNGLPTWQEL 378
BLAST of mRNA_H-elongata_contig80212.15674.1 vs. uniprot
Match: L1K4H8_GUITC (PfkB domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K4H8_GUITC) HSP 1 Score: 104 bits (259), Expect = 2.720e-23 Identity = 66/182 (36.26%), Postives = 93/182 (51.10%), Query Frame = 1
Query: 1 RDVPVVLDAEKDRPHLKDLLPLADYIICNRHFPSAFTGSDDREVAICQLLGQGRARLVATTLGADGCIVEEQPWHGYGDLSLPLGCPMGVKTAVRSEDGAD----IPADTRQARGSSFRYMWAPSWPVQSSEIVDTTGAGDCFIAGFMYGMTHRLGISRTLALASYVSAKKLHQPGARQGVP 534
R +PVVLDAEKDRP++++LLPLAD I+ N +P F + + + LL G A+++ +T G GC VR EDG I + G P+ V+ E+VDTTGAGD FI G +YG+ + I R L ASYV+++K+ GAR+G+P
Sbjct: 169 RSIPVVLDAEKDRPYMRELLPLADVIVTNSKYPLVFDSAGFVQ-GMQALLQLGSAKMIISTQGDRGCTA-----------------------LVRGEDGGGAYEKITTEHMLVSGEPCTVYTCPALRVE--EVVDTTGAGDSFIGGVIYGVLNDWKIDRILMFASYVASRKIQGRGAREGIP 324 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80212.15674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig80212.15674.1 >prot_H-elongata_contig80212.15674.1 ID=prot_H-elongata_contig80212.15674.1|Name=mRNA_H-elongata_contig80212.15674.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp RDVPVVLDAEKDRPHLKDLLPLADYIICNRHFPSAFTGSDDREVAICQLLback to top mRNA from alignment at H-elongata_contig80212:494..2790- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig80212.15674.1 ID=mRNA_H-elongata_contig80212.15674.1|Name=mRNA_H-elongata_contig80212.15674.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2297bp|location=Sequence derived from alignment at H-elongata_contig80212:494..2790- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig80212:494..2790- >mRNA_H-elongata_contig80212.15674.1 ID=mRNA_H-elongata_contig80212.15674.1|Name=mRNA_H-elongata_contig80212.15674.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1182bp|location=Sequence derived from alignment at H-elongata_contig80212:494..2790- (Himanthalia elongata Himel1 dioecious)back to top |