mRNA_H-elongata_contig80059.15663.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: D7FQ34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ34_ECTSI) HSP 1 Score: 448 bits (1153), Expect = 2.530e-147 Identity = 243/396 (61.36%), Postives = 292/396 (73.74%), Query Frame = 1
Query: 58 MVAGGYSSEQ----CSPSDGGTVGASQEG----TVEGVDTSPLKYYPPREIYEVDEIALREALAGAERSSKENAHGVASFRLSGLLDQSCQLISAYD--KLKVMTGLSSTASPAKSD-TGVAPKLKIRSEICPSKRREIPKGGVEDWHLSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELRPFMRAAFVVEYERGGALLREITAAMDQINGQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGEAYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
MV+GGY E SP D + A+ + T G + +P+K PR+IYEVDE+ LREA+A A + K NAHGVASF SGLLDQS QL+ AY K K+ S+ S S T VAP+LK+R+EIC KRREIPKGGVEDWHLS+EER VR PGAYL+AG+++G+R LSL + PLRTL+EGSAE TGPATEE RPF RA FV+EYE GGAL R++TAAMD ING+AL +IQGSLRAY L+PEEK+ ++G LDIVCGFM+ID DSRT+VLEG G L+ LL++V R PNG+AYRALEN +VRFS+R+YTCF+ DLKKVRLRDPLP LC NPEIY+RSKVSADCFD LH L+MLR+V R+ EAAE LFP QL+QV
Sbjct: 1 MVSGGYPEEDDACDSSPGDASQIKANTDSGEADTCAGQEPTPVKCAGPRDIYEVDELVLREAIAEAGSAGKHNAHGVASFHFSGLLDQSRQLVMAYSNSKRKLEDDASTATSAVPSAITDVAPRLKMRTEICQRKRREIPKGGVEDWHLSDEERFVRWPGAYLEAGSSVGVR-----LSLAR------PLRTLEEGSAERTGPATEEPRPFSRAVFVMEYEEGGALTRDVTAAMDHINGRALNNIQGSLRAYVLSPEEKQAANDGALDIVCGFMIIDEDSRTMVLEGLSGPQGGLTALLKKVGRTRPNGQAYRALENPEVRFSRRMYTCFDADLKKVRLRDPLPTLCQNPEIYDRSKVSADCFDALHCLRMLRKVDRLREAAEQGLFPEGAQLIQV 385
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A6H5JK05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK05_9PHAE) HSP 1 Score: 385 bits (990), Expect = 2.930e-127 Identity = 210/331 (63.44%), Postives = 247/331 (74.62%), Query Frame = 1
Query: 229 AERSSKENAHGVASFRLSGLLDQSCQLISAYDKLKV-MTGLSSTASPA--KSDTGVAPKLKIRSEICPSKRREIPKGGVEDWHLSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELRPFMRAAFVVEYERGGALLREITAAMDQINGQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGEAYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
A + K NAHGVASF LSGLLDQS QL+ AY K + +STA+ A + T VAP+LK+R+EIC KRREIP+GGVEDWHL++EER VR PGA LSL + PLRTL+EGSAE TGPATEE RPF RA FVVEYE GGAL R++TAAMD ING+AL +I+GSLRAY L+PEEK+ D+G LDIVCGFM+ID SRT+VLEG G L+ LL++V R GPNG+AYRALEN +VRFS+R+YTCF+ DLKKVRLRDPLP LC NPEIY+RSKVSADCFD LH L+MLR+V R+ EAAE LFP QL+QV
Sbjct: 2 AGSAGKHNAHGVASFHLSGLLDQSRQLVMAYSNSKRRLEDDASTATSALPSAITDVAPRLKMRAEICQRKRREIPRGGVEDWHLTDEERFVRWPGA----------------LSLAR------PLRTLEEGSAERTGPATEEPRPFSRAIFVVEYEEGGALTRDVTAAMDSINGRALNNIRGSLRAYVLSPEEKQAADDGALDIVCGFMIIDDCSRTMVLEGLCGPQGGLTALLKKVGRTGPNGQAYRALENPEVRFSRRMYTCFDADLKKVRLRDPLPTLCQNPEIYDRSKVSADCFDALHCLRMLRKVDRLREAAEQGLFPEGAQLIQV 310
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A836CB85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB85_9STRA) HSP 1 Score: 185 bits (469), Expect = 6.780e-48 Identity = 117/280 (41.79%), Postives = 157/280 (56.07%), Query Frame = 1
Query: 385 VAPKLKIRSEICPSKRREIPKGGVEDWHLSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELRPFMRAAFVVEYERGGALLREITAAMDQIN----GQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGEAYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
+A L + +++C S R P RL R PG YL+AG LG+R SL + + P E RPF RAAFV EY GAL+ + AA+D +N G AL+ SLRAY L+ E+ D G LD+VCGF V+DA RT+V+EG ++ ++ LL RV R NG AYR L + +VRF++R YT FN DLK+VRLR PLP LC P++Y+R++VSA CF L +L+ LRR + + A + LFP A LL+V
Sbjct: 162 LAAALHLSADVCASARGAPPSAXXXXXXXX---RLSRAPGRYLEAGCALGVRA-----SLARPLAPYA------------------ETRPFTRAAFVFEYG-DGALVAALGAALDAVNAAALGGALRASGCSLRAYCLSAAERAAADAGALDVVCGFAVVDAHCRTVVVEGL--ADGGVAALLARVPRRARNGGAYRVLADPRVRFARRAYTAFNADLKRVRLRAPLPALCEGPDVYSRARVSAQCFAALDALRQLRRAASLRHARDCRLFPDAAALLEV 412
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: T0RJV8_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RJV8_SAPDV) HSP 1 Score: 179 bits (455), Expect = 6.570e-46 Identity = 125/350 (35.71%), Postives = 183/350 (52.29%), Query Frame = 1
Query: 175 PREIYEVDEIALREALA-GAERSSKENAHGVASFRLSGLLDQSCQLISAYDKLKVMTGLSSTASPAKSDTGVAPKLKIRSEICPSKRREIPKGGVEDWH--LSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELRPFMRAAFVVEYERGGALLREITAAMDQINGQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGE-AYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
P +I+ VD+IA + +++ N+HGVA+FR LL+ S G +LK ++I KRR+ PK G +D LS+ E+LVR+PGAYL +TL + F L P PA++ F R VV Y+ ++ + ++ AM+++NG AL LR+Y+LTP +K+ D G L+I+ GF V+D D R IVLEG + +++ + R GPN + YR N VRFS+RLY F+ DLK+++LRDPLP + PE+Y RSKVS +CF L+ LQ +R+ SR+ E + LFP LL+V
Sbjct: 350 PLDIFVVDDIAKADIQTLFFQQAGDRNSHGVATFRFYELLN--------------------ATHLRPSSEGPFLQLKFAADIVQHKRRQPPKEGTDDAEDDLSQVEKLVRVPGAYLSHNSTLHLDATLAFPLLKPTRRP------------SLVAPASDNRSLFSRLVLVVPYDDTESV-QAVSRAMEKVNGAALPGAP--LRSYQLTPTQKQAADAGELNILTGFQVLDTDLRMIVLEGLAEAGMAVAHAS--IPRRGPNAQDGYRMFANHDVRFSQRLYAAFDVDLKRIKLRDPLPDIIKRPELYMRSKVSENCFQALNRLQDVRKASRLVELRDLDLFPLVSMLLEV 662
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A8J2S3F3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S3F3_9STRA) HSP 1 Score: 174 bits (441), Expect = 4.890e-44 Identity = 125/353 (35.41%), Postives = 185/353 (52.41%), Query Frame = 1
Query: 184 IYEVDEIALREALAGAERSSKENAHGVASFRLSGLLDQSCQLISAYDKLKVMTGLSSTASPAKSDTGVAPKLKIRSEICPSKRREIPKGGVEDWHLSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSA------EGT-----------------GPATEELRPFMRAAFVVEYERGGALLREITAAMDQINGQALKD-IQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGEAYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAA 1170
+ EVD++ A + ++AHG A R+ LL+ S L A+ + + K D V P ++ +++ KRR PKGGV+DW L+E +RL G Y DA + +G+ + + PLR+LQEG EGT G ++E PF R A + Y + G LL ++ AMD IN + L + GSL +++L+PEE + ++G LDIV G+ VID RTIVLEG S++++ + V R N ++YR L + VRF++R+YT FN DLKK+RLR+PLP+L +P+IYN KV+ F L L LRR + + A
Sbjct: 405 LEEVDQLFRLALTASWCKCGDDHAHGQADIRVDALLENSAALARAFAR----------NNKTKPDA-VRPLVESSADVTGRKRRITPKGGVDDWRLNEAQRLCVKTGMYSDANSVVGVS-----------VGLQRPLRSLQEGCFVDGCFWEGTLGDQPFATQNSKGKIFRGASSEA--PFGRLAIMFPY-KDGELLGKLLEAMDAINHRTLSSTMPGSLVSHQLSPEEVEAAESGELDIVSGWHVIDPACRTIVLEGLA---DSIAEIADAVPRDAINDDSYRLLADPTVRFTQRVYTQFNVDLKKIRLREPLPLLAESPDIYNPVKVATGAFTALDRLVQLRRSPSLRQLA 729
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A7S1U4M0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4M0_9STRA) HSP 1 Score: 173 bits (438), Expect = 5.370e-44 Identity = 111/279 (39.78%), Postives = 150/279 (53.76%), Query Frame = 1
Query: 391 PKLKIRSEICPSKRREIPKGGVEDWHLSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELRPFMRAAFVVEYERGGALLREITAAMDQINGQALKDI-----QGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGEAYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
P+ K R I P+KRR PK G+ DW LSE ERLVR PG Y + A L F ++ + P L E ELR F RA FV Y G LL ++ A ++++N AL +GSL T EE + + G+LD+VCGF +ID D R IV+EG + ++ K+ E + R N YR L N VRF +R+YT +N DLKK+RLR+ LP+L P++YN +K+ C L L+ +RR M EAA LFP A+ L +V
Sbjct: 52 PQQKGRVSIAPAKRRITPKTGLSDWSLSEGERLVRQPGRYYETDAAL-------FTTVGLWR----PQMVLGE---------EVELRNFARACFVFGYGDSG-LLADVLAKLNEVNTAALGGPDELAKRGSLNTISFTEEEIERANAGLLDVVCGFEIIDEDCRMIVIEGLAAA--AMKKIEEEIPRLAANNPDYRVLSNVDVRFKERMYTSYNADLKKIRLREALPLLADMPDLYNSAKIDMACAIALVQLEEMRRADSMQEAAYLDLFPTAEHLSEV 307
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A833T8R7_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T8R7_PHYIN) HSP 1 Score: 171 bits (432), Expect = 4.860e-43 Identity = 130/373 (34.85%), Postives = 192/373 (51.47%), Query Frame = 1
Query: 145 VDTSPLKYYPPREIYEVDEIALREALAGAERSSKENAHGVASFRLSGLLDQSCQLISAYDKLKVMTGLSSTASPAKSDTGVAPKLKIRSEICPSKRREIPKGGVEDWHLSEE------------ERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELR----PFMRAAFVVEYERGGALLREITAAMDQINGQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNG-EAYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
V SP P E+ EVD+IA + S + +G+A+FRL+ LL+ + Q M G+ A SD LK+ S++ KRR P G LSEE E+++R PGAY+ GA+L I E + P+ L GSA+ PA+ E F R ++ Y + + L E+T AM +N +AL + +R+Y++T EK D + G LD+V G +ID+ R ++LEG +K + L ++++R GPN + R N ++RF++RLYT F DLK+++LR PL VL T P+IY RSKVSA+C L L +R+V R+ E LFP +Q L +V
Sbjct: 92 VGNSPTTTAQPMELTEVDDIARSDWRMMLANSGRLFPYGLATFRLTELLNLAKQR---------MGGMK-----ANSDRSHM-VLKLTSDVISMKRRASPLGTAT---LSEESDLPATVDLSPLEKVIREPGAYISTGASLSITVEL-----------QSPIEILSAGSADAL-PASAESEIAALKFSRIVVIIPY-KDSSTLGEVTKAMTNVNLKALPGVP--IRSYQMTESEKMDCETGALDVVTGAQIIDSQFRMVILEGL--VDKGMKYLHQQLQRKGPNDPKGCRMFCNDELRFTRRLYTEFEIDLKRIKLRYPLSVLMTTPDIYMRSKVSANCHQALARLAEMRKVQRLIEVKHLDLFPTSQMLFEV 429
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A662WRZ5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WRZ5_9STRA) HSP 1 Score: 166 bits (419), Expect = 3.810e-41 Identity = 120/362 (33.15%), Postives = 184/362 (50.83%), Query Frame = 1
Query: 175 PREIYEVDEIALREALAGAERSSKENAHGVASFRLSGLLDQSCQLISA--------YDKLKV---MTGLSSTASPAKSDTGVAPKLKIRSEICPSKRREIPKGGVEDWHLSEEERLVRLPGAYLDAGATLGIRQEK----GFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELRPFMRAAFVVEYERGGALLREITAAMDQINGQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNG-EAYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
P E+ VD+IA R+ S + +G+ SFRL+ LL+ + Q + A Y LK+ + + +ASP + + S+ E+P L+ E+ +R PGAY+ G ++ I+ LS++ PL S GP F R ++ Y + A L E+T AM IN +AL + +R+Y+L+ EK D DNG++D++ G +ID+ R ++LEG G K + + E+++R PN + YR N + F++RLYT F DLK+++LR PLP L T P+IY R+KVS +C L L LR+V R++E LFP AQ LL+V
Sbjct: 395 PLELAIVDDIARRDGRTLLAHSRRLFPYGLVSFRLTELLNTAKQRMGATRAAGDSPYMALKLTADVIAMKRSASP------------LGTTAASSEEAELP----STLDLTALEKAIREPGAYVSTGTSVSIQVALQAPIAVLSVNSGGASVTPLGCGSPASTVPGGPEPPPQLKFSRLVVIIPY-KDSATLGEVTHAMTAINLKALPGVP--IRSYQLSESEKLDCDNGVMDVITGTQIIDSQFRMVILEGLAG--KGMKAMHEQLQRKSPNDPQGYRVFANGTLLFARRLYTAFEIDLKRIKLRYPLPALMTIPDIYMRAKVSENCHQALAKLADLRQVQRLAEVKRLDLFPTAQMLLEV 735
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A329SI59_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SI59_9STRA) HSP 1 Score: 166 bits (419), Expect = 3.820e-41 Identity = 127/392 (32.40%), Postives = 198/392 (50.51%), Query Frame = 1
Query: 109 TVGASQEGTVEGVDTSPLKYYPPREIYEVDEIALREALAGAERSSKENAHGVASFRLSGLLDQSCQLISAYDKLKVMTGLSSTASPAKSDTGVAPKLKIRSEICPSKRREIPKGGVEDWHLSEE------------ERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQ-----EGSAEGTGPAT-EELRP-----FMRAAFVVEYERGGALLREITAAMDQINGQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGE-AYRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
T S + + T+ P E+ EVD+IA + S + HG+A+FRL+ LL+ +A +++ M S A LK+ ++I KRR P G LSEE E+++R PGAY+ GA+L I I + P+ TL E + + PA+ E+++P F R ++ Y + + L E+T AM +N AL + +R+Y++ EK D + G LD++ G +ID+ R I+LEG ++K + L ++++R GPN YR L N ++RFS+RLYT F DLK+++LR PL VL T P+IY R+KVS +C L L +R+ R+++ LFP + LL+V
Sbjct: 379 TTPRSADADQPAISTTTTVNSKPMELSEVDDIARSDWRMMLANSGRLFPHGLATFRLTELLN------TAKQRMQGMKTDSDRPYMA---------LKLTTDIISMKRRASPLGTAT---LSEESELPATVDLSPLEKVIREPGAYISTGASLRIN-----------IVLQSPIETLDTDPAAELTVDSEIPASVEDVKPATALKFSRMVVIIPY-KDNSTLGEVTKAMTSVNLTALPGVP--IRSYQMMESEKMDCETGALDVITGTQIIDSQFRMIILEGL--ADKGMKHLHQQLQRKGPNDPLGYRMLCNDELRFSRRLYTVFEIDLKRIKLRYPLSVLMTTPDIYMRAKVSENCHQALARLADMRKAQRLADVKHLDLFPTTKMLLEV 736
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Match: A0A024URJ4_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024URJ4_9STRA) HSP 1 Score: 165 bits (417), Expect = 5.260e-41 Identity = 127/359 (35.38%), Postives = 184/359 (51.25%), Query Frame = 1
Query: 166 YYPPR---EIYEVDEIALREALA-GAERSSKENAHGVASFRLSGLLDQSCQLISAYDKLKVMTGLSSTASPAKSDTGVA-PKLKIRSEICPSKRREIPK-GGVEDWHLSEEERLVRLPGAYLDAGATLGIRQEKGFLSLHQYIYPRGPLRTLQEGSAEGTGPATEELRP---FMRAAFVVEYERGGALLREITAAMDQINGQALKDIQGSLRAYRLTPEEKKDTDNGILDIVCGFMVIDADSRTIVLEGAGGSNKSLSKLLERVRRAGPNGEA-YRALENSKVRFSKRLYTCFNTDLKKVRLRDPLPVLCTNPEIYNRSKVSADCFDVLHSLQMLRRVSRMSEAAEYALFPAAQQLLQV 1212
++PP ++++VDEIA ++ + R+ NAHGV +R Y+ L+ T + K + G LK+ ++I P KRR PK G ED +LS+ ++LVRLPG+YL+ L + + PL GS TGP T F R V+ Y A L+ ++ AM+ IN AL + LR+Y LT +K+ D+G L+++ GF VIDA R I LEG + L+ L + V R N +R N VRF RLYT F+ D+K+++LRDPLP + PE+Y RSKVS +CF L+ L +R+ R+ E + LFP Q LL+V
Sbjct: 365 HHPPNAKLDVFQVDEIAKQDIQSLYFVRAGDCNAHGVGMYRF-------------YELLR-------TTNLKKQEAGKPFMTLKLTADIVPHKRRIPPKEGSDEDINLSQVDKLVRLPGSYLNCLTALAVEATL-----------QNPL-----GSNPPTGPPTPCKHGGGVFTRMVVVIPYN-DVATLQNMSKAMESINSAALPGVP--LRSYLLTAAQKEACDSGDLNVITGFQVIDAHYRMIFLEGI--AETGLATLHKMVPRTAANSRTGFRMFANPDVRFVSRLYTAFDVDMKRIKLRDPLPDIVKRPELYMRSKVSENCFQALNRLGDVRKADRLIELKDLNLFPTVQMLLEV 682 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig80059.15663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig80059.15663.1 >prot_H-elongata_contig80059.15663.1 ID=prot_H-elongata_contig80059.15663.1|Name=mRNA_H-elongata_contig80059.15663.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=404bp RDPRPTFREKRENMIRLERMVAGGYSSEQCSPSDGGTVGASQEGTVEGVDback to top mRNA from alignment at H-elongata_contig80059:317..2668+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig80059.15663.1 ID=mRNA_H-elongata_contig80059.15663.1|Name=mRNA_H-elongata_contig80059.15663.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2352bp|location=Sequence derived from alignment at H-elongata_contig80059:317..2668+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig80059:317..2668+ >mRNA_H-elongata_contig80059.15663.1 ID=mRNA_H-elongata_contig80059.15663.1|Name=mRNA_H-elongata_contig80059.15663.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2424bp|location=Sequence derived from alignment at H-elongata_contig80059:317..2668+ (Himanthalia elongata Himel1 dioecious)back to top |