mRNA_H-elongata_contig7998.15650.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7998.15650.1
Unique NamemRNA_H-elongata_contig7998.15650.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig7998.15650.1 vs. uniprot
Match: A0A6A3J8V8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J8V8_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.710e-45
Identity = 93/239 (38.91%), Postives = 142/239 (59.41%), Query Frame = 1
Query:    1 FPIKDLGEASYYLGCHITWDRNAGTLKLDQHQYIQTVAERFGV--TKTSIVPSAAGRKALSKSDSPQTDAEIEEMRQISCREIVGALMWAATMTKPDISFAAHQLAKFNDNPGPTQWRAAQKVLQYLWRTRDLGITYGGEPGGETKLLAWIDEDYGTCPDTCRSVSGGAVMMAGGAIIWFSRVQKVTAAASSESEYVALAKMVNELRFLRHVKEFITPPIDVAIKIHEDNEGAIKMAKN 711
            F +K+LGEA + LG  I  DR  GTL + Q +Y+  V  RF     K  + P   G K LSK+ SP TDAE E+MR    + ++G+L++  T T+PD+++   QL++F +NPG   W+AA +VL+YL  T+D GI Y G   G+  L  + D D+G+  D  RSVSG  +M+ G   ++ S+ Q+  A +S+E+EY+AL+    E+ + R   + +      A ++ EDN+GAI +A N
Sbjct:  130 FKMKELGEAKFILGMEIDHDRTTGTLMVKQTRYVDDVVNRFNQQDAKAVVNPCETGMK-LSKTQSPATDAEREDMRGKPYKSLIGSLLYITTCTRPDVAYIVTQLSQFLENPGQQHWKAAIRVLRYLKTTKDFGIVYSGN-NGKAVLEVYTDADWGSNLDGRRSVSGIMMMIGGAPGVFKSKYQRTVALSSAEAEYMALSLCTQEVLWTRATLKDLGHEQVGATQVWEDNQGAIALASN 366          
BLAST of mRNA_H-elongata_contig7998.15650.1 vs. uniprot
Match: E2LZP6_MONPE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LZP6_MONPE)

HSP 1 Score: 165 bits (418), Expect = 5.390e-44
Identity = 92/239 (38.49%), Postives = 135/239 (56.49%), Query Frame = 1
Query:    1 FPIKDLGEASYYLGCHITWDRNAGTLKLDQHQYIQTVAERFGVT--KTSIVPSAAGRKALSKSDSPQTDAEIEEMRQISCREIVGALMWAATMTKPDISFAAHQLAKFNDNPGPTQWRAAQKVLQYLWRTRDLGITYGGEPGGETKLLAWIDEDYGTCPDTCRSVSGGAVMMAGGAIIWFSRVQKVTAAASSESEYVALAKMVNELRFLRHVKEFITPPIDVAIKIHEDNEGAIKMAKN 711
            F ++DLG  SY LG  IT +R    L L Q QYI    E FG+T  K +  P       LSKS SPQT  E+EEM +I     VG+L++ ATMT+PDI++ A  LA+FN NPG   W+A + VL+YL  T D+ + YG +P      + + D D G   D  +S +G  + +  GA+ W S++Q +   +S+E+EY+A      E++ +R++ E +        K+  DN+  IK+AKN
Sbjct:  308 FKLRDLGATSYLLGVEITRNRPERKLYLSQRQYIINKLEEFGMTDCKPATTPMTPNL-ILSKSQSPQTPDEVEEMSEIPYISAVGSLLYLATMTRPDIAYTASVLARFNSNPGMDHWKAVKHVLRYLKGTMDIKLEYGPDPTTNDLFVTYCDSDLGGNRDNGKSTTGYILKLGSGAVSWSSKLQPMVTLSSTEAEYIAAVAAGKEIKAMRNLLEELGYQSQQPAKLLIDNQSTIKVAKN 545          
BLAST of mRNA_H-elongata_contig7998.15650.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 1.020e-43
Identity = 90/237 (37.97%), Postives = 131/237 (55.27%), Query Frame = 1
Query:    4 PIKDLGEASYYLGCHITWDRNAGTLKLDQHQYIQTVAERFGVTKTSIVPSAAGRKALSKSDSPQTDAEIEEMRQISCREIVGALMWAATMTKPDISFAAHQLAKFNDNPGPTQWRAAQKVLQYLWRTRDLGITYGGEPGGETKLLAWIDEDYGTCPDTCRSVSGGAVMMAGGAIIWFSRVQKVTAAASSESEYVALAKMVNELRFLRHVKEFITPP-IDVAIKIHEDNEGAIKMAKN 711
            P+K LGE  +Y GC+   DR AG L + Q  Y + + ER GV     +P     +     DS   +  +E       R ++G+L+W A +T+PDI+ A   +A++   P    WRAA  +L Y  RT   GI++         L+ + D DY +     RSVSGG VM AGGAI WFS+ QK    +++++EYVA+A M  E+ FLR V  F+ P  +   I ++EDNEGAI++AK+
Sbjct:   94 PVKSLGELQWYSGCYYERDREAGRLTISQETYTKELGERHGVEWGGGIPLPTTWRLW---DSDVNEPSVE----YPFRALIGSLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGILGYAVRTSSFGISFQRGTVSGFSLITFADADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLREVWRFMLPKELRPCIPLYEDNEGAIQIAKH 323          
BLAST of mRNA_H-elongata_contig7998.15650.1 vs. uniprot
Match: A0A6H5JRZ9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ9_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 1.500e-43
Identity = 88/238 (36.97%), Postives = 133/238 (55.88%), Query Frame = 1
Query:    4 PIKDLGEASYYLGCHITWDRNAGTLKLDQHQYIQTVAERFGVTKTSIVPSAAGRKALS-KSDSPQTDAEIEEMRQISCREIVGALMWAATMTKPDISFAAHQLAKFNDNPGPTQWRAAQKVLQYLWRTRDLGITYGGEPGGETKLLAWIDEDYGTCPDTCRSVSGGAVMMAGGAIIWFSRVQKVTAAASSESEYVALAKMVNELRFLRHVKEFITPP-IDVAIKIHEDNEGAIKMAKN 711
            P+K LGE  +Y GC+   DR AG L + Q  Y + + ER+GV     +P     K     +D P  +           R +VG+L+W A +T+PDI+ +   +A+++  P    W+AA  +L Y  RT   GI++         L+ +++ DY +     RSVSGG VM AGGAI WFS+ QK    +++++EYVA+A M  E+ FLR V  F+ P  +   I ++EDNEGAI++AK+
Sbjct:  146 PVKSLGELKWYSGCYYERDREAGRLTISQQTYTEELGERYGVEWGGGIPLPTTWKLWDFDADEPSVEHPF--------RALVGSLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSILGYAVRTSSFGISFQSGTVSGFSLITFVNADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIAKH 375          
BLAST of mRNA_H-elongata_contig7998.15650.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY)

HSP 1 Score: 161 bits (407), Expect = 2.530e-43
Identity = 89/239 (37.24%), Postives = 140/239 (58.58%), Query Frame = 1
Query:    1 FPIKDLGEASYYLGCHITWDRNAGTLKLDQHQYIQTVAERFGVT--KTSIVPSAAGRKALSKSDSPQTDAEIEEMRQISCREIVGALMWAATMTKPDISFAAHQLAKFNDNPGPTQWRAAQKVLQYLWRTRDLGITYGGEPGGETKLLAWIDEDYGTCPDTCRSVSGGAVMMAGGAIIWFSRVQKVTAAASSESEYVALAKMVNELRFLRHVKEFITPPIDVAIKIHEDNEGAIKMAKN 711
            +P+ DLGE S+ LG  +  DR A TL L QH YI ++  RF  T  K S +P     + L+KS  P + A+I  MR+I  RE +G+LM+AA  T+PDISFA   LA+F+ NPG T W A ++V +YL  T++L + YGG   G   L  ++D D G   +   +++G   ++ GGA+ W S+ Q++   +++E+EYVA      E  ++R +   +  P+D    ++ D++ AI + K+
Sbjct:  169 YPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQ-LTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRG---LEGYVDAD-GASQEHRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRRLLGEVFRPLDGPTTLYSDSQSAIALTKD 402          
BLAST of mRNA_H-elongata_contig7998.15650.1 vs. uniprot
Match: A0A4S4L7S0_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4L7S0_9AGAM)

HSP 1 Score: 157 bits (396), Expect = 4.980e-43
Identity = 86/239 (35.98%), Postives = 136/239 (56.90%), Query Frame = 1
Query:    1 FPIKDLGEASYYLGCHITWDRNAGTLKLDQHQYIQTVAERFGVTKTSIV--PSAAGRKALSKSDSPQTDAEIEEMRQISCREIVGALMWAATMTKPDISFAAHQLAKFNDNPGPTQWRAAQKVLQYLWRTRDLGITYGGEPGGETKLLAWIDEDYGTCPDTCRSVSGGAVMMAGGAIIWFSRVQKVTAAASSESEYVALAKMVNELRFLRHVKEFITPPIDVAIKIHEDNEGAIKMAKN 711
            F + DLG  S+ LG  +  DR+   L L Q QYI  + ERF ++  + V  P   G + LSK+ +P+   EI  M+ +  R++VGALM+ A  T+PDIS+A   LA+F+ NPGP  W+AA+ + +YL  T+D+ +TY  +P        + D D+G   D  RS SG  V M  GAI W SR+Q +   +++E+EY++  +   E+ +LR++             ++ DN+ A+ +A+N
Sbjct:   22 FKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHR-LSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFSDADHGGDEDNRRSTSGMVVKMGTGAISWASRLQTIVTLSTTEAEYISAVQSGQEIIWLRNLLSEFGYEFTGPSTLYVDNQSALAVARN 259          
BLAST of mRNA_H-elongata_contig7998.15650.1 vs. uniprot
Match: A0A401GID0_9APHY (Transposon Ty5-1 protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GID0_9APHY)

HSP 1 Score: 155 bits (393), Expect = 2.760e-42
Identity = 91/239 (38.08%), Postives = 134/239 (56.07%), Query Frame = 1
Query:    1 FPIKDLGEASYYLGCHITWDRNAGTLKLDQHQYIQTVAERFGVT--KTSIVPSAAGRKALSKSDSPQTDAEIEEMRQISCREIVGALMWAATMTKPDISFAAHQLAKFNDNPGPTQWRAAQKVLQYLWRTRDLGITYGGEPGGETKLLAWIDEDYGTCPDTCRSVSGGAVMMAGGAIIWFSRVQKVTAAASSESEYVALAKMVNELRFLRHVKEFITPPIDVAIKIHEDNEGAIKMAKN 711
            F ++DLG   + LG  I  DR   T+ L Q QYI  + E +G++  K+   P   G + LSK+ +PQT  E E MR++     VGALM+ A  T+PDI FA   LA+FN NPGPT W A + V  YL  T DL + YG     E   L + D D+G   D CRS  G    +  GAI W S++Q + A +++E+EY+A  +   E+ ++R++   +   +  A  ++ DN+ AI ++KN
Sbjct:   52 FKLRDLGSTQFLLGIDIKRDRAKHTISLSQRQYIVDMLECYGLSDCKSVSTPMDPGAE-LSKALAPQTQEETEYMRKVPYLSAVGALMYLAITTRPDIMFAISCLARFNANPGPTHWIAVKHVFCYLKGTMDLRLHYGPSDVKEF-FLTYTDSDFGGERDNCRSTGGYLEKVGTGAISWSSKLQSLIAQSTTEAEYIAAVEAGKEILWMRNLLTELGYTVSKASTLYTDNQSAISVSKN 288          
BLAST of mRNA_H-elongata_contig7998.15650.1 vs. uniprot
Match: A0A6H5JR13_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR13_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 3.860e-42
Identity = 90/237 (37.97%), Postives = 132/237 (55.70%), Query Frame = 1
Query:    4 PIKDLGEASYYLGCHITWDRNAGTLKLDQHQYIQTVAERFGVTKTSIVPSAAGRKALSKSDSPQTDAEIEEMRQISCREIVGALMWAATMTKPDISFAAHQLAKFNDNPGPTQWRAAQKVLQYLWRTRDLGITYGGEPGGETKLLAWIDEDYGTCPDTCRSVSGGAVMMAGGAIIWFSRVQKVTAAASSESEYVALAKMVNELRFLRHVKEFITPP-IDVAIKIHEDNEGAIKMAKN 711
            P+K LGE  +Y GC+   DR AG L + Q  Y + + ER+GV     +P     +     DS   +  +E       R ++G+L+W A +T+PDI+ A   +A++   P    WRAA  +L Y  RT   GI++         L+ + D DY +     RSVSGG VM AGGAI WFS+ QK    +++++EYVA+A M  E+ FLR V  F+ P  +   I ++EDNEGAI++AK+
Sbjct:  398 PVKSLGELQWYSGCYYERDREAGRLTISQETYTKELGERYGVEWGGGIPLPTTWRLW---DSDVNEPSVE----YPFRALIGSLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGILGYAVRTSSFGISFQRGTVSGFSLITFADADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIAKH 627          
BLAST of mRNA_H-elongata_contig7998.15650.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 6.630e-42
Identity = 88/238 (36.97%), Postives = 137/238 (57.56%), Query Frame = 1
Query:    4 PIKDLGEASYYLGCHITWDRNAGTLKLDQHQYIQTVAERFGVTKTSIVPSAAGRKALSKSDSPQTDAEIEEMRQISCREIVGALMWAATMTKPDISFAAHQLAKFNDNPGPTQWRAAQKVLQYLWRTRDLGITYGGEPG-GETKLLAWIDEDYGTCPDTCRSVSGGAVMMAGGAIIWFSRVQKVTAAASSESEYVALAKMVNELRFLRHVKEFITPPIDVA-IKIHEDNEGAIKMAKN 711
            P K+LGE  ++LGC    DR AGT+++ Q  YI++V ERF + +TS +P+       S ++  ++  E EE   +  RE+VG LMW A  T+PDIS A   +A+ +  P    W+AAQK+L YL  T  L + Y  +    +   L ++D D+ +     RSVSG  V++A   + W S  QK  + ++SE+EY+A+   V E  F+  + +F+ P ++   I + EDNEGAI +A+N
Sbjct: 1001 PTKNLGEVKFFLGCAFIRDREAGTIEISQESYIRSVLERFKICRTSSIPA-------SPANDNRSVMEDEEAGDVPFREVVGCLMWVANGTRPDISNAVRAVARHSHEPKKRDWKAAQKILNYLLATAHLTLKYKRDSTVDDVGTLVYVDADFASKATDRRSVSGALVIVAACLVAWLSWTQKCVSQSTSEAEYLAMGDGVKESLFVNGMLQFLRPSVEPRKIDVLEDNEGAIALAEN 1231          
BLAST of mRNA_H-elongata_contig7998.15650.1 vs. uniprot
Match: A0A6H5K9B2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B2_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 6.810e-42
Identity = 83/237 (35.02%), Postives = 136/237 (57.38%), Query Frame = 1
Query:    4 PIKDLGEASYYLGCHITWDRNAGTLKLDQHQYIQTVAERFGVTKTSIVPSAAGRKALSKSDSPQTDAEIEEMRQISCREIVGALMWAATMTKPDISFAAHQLAKFNDNPGPTQWRAAQKVLQYLWRTRDLGITYGGEPGGETKLLAWIDEDYGTCPDTCRSVSGGAVMMAGGAIIWFSRVQKVTAAASSESEYVALAKMVNELRFLRHVKEFITPPIDVA-IKIHEDNEGAIKMAKN 711
            P K+LGE  ++LGC    DR AGT ++ Q  YI++V ++F V  TS  P++         D+ ++  E E  + +  RE+VG+LMW A  T+ DI+ A   +A+ + NP    W+A+QK+L YL  T  L + +  +   +   L ++D D+ +  +  RSVSG  V++A   ++W S+ QK  + ++SE+EY+A+   V E  F+  + +F+ P      I + EDNEGAI +A+N
Sbjct:  203 PTKNLGEVKFFLGCEYIRDREAGTKEISQESYIRSVLDKFNVCSTSSTPASPAN------DNNRSLKEDEGAKDVPFREVVGSLMWIANRTRCDINIATRAVARQSHNPKKRDWKASQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAEN 433          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7998.15650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3J8V8_9STRA1.710e-4538.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
E2LZP6_MONPE5.390e-4438.49Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JWK8_9PHAE1.020e-4337.97Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRZ9_9PHAE1.500e-4336.97Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4K468_9APHY2.530e-4337.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4L7S0_9AGAM4.980e-4335.98Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GID0_9APHY2.760e-4238.08Transposon Ty5-1 protein n=1 Tax=Sparassis crispa ... [more]
A0A6H5JR13_9PHAE3.860e-4237.97Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JB16_9PHAE6.630e-4236.97Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K9B2_9PHAE6.810e-4235.02Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7998contigH-elongata_contig7998:5069..5779 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score167.9
Seed ortholog evalue5.6e-39
Seed eggNOG ortholog164328.Phyra85763
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size711
Cds size711
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931205.0500338-CDS-H-elongata_contig7998:5068..57791622931205.0500338-CDS-H-elongata_contig7998:5068..5779Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7998 5069..5779 -
1691679740.830229-CDS-H-elongata_contig7998:5068..57791691679740.830229-CDS-H-elongata_contig7998:5068..5779Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7998 5069..5779 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7998.15650.1prot_H-elongata_contig7998.15650.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7998 5069..5779 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7998.15650.1

>prot_H-elongata_contig7998.15650.1 ID=prot_H-elongata_contig7998.15650.1|Name=mRNA_H-elongata_contig7998.15650.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp
FPIKDLGEASYYLGCHITWDRNAGTLKLDQHQYIQTVAERFGVTKTSIVP
SAAGRKALSKSDSPQTDAEIEEMRQISCREIVGALMWAATMTKPDISFAA
HQLAKFNDNPGPTQWRAAQKVLQYLWRTRDLGITYGGEPGGETKLLAWID
EDYGTCPDTCRSVSGGAVMMAGGAIIWFSRVQKVTAAASSESEYVALAKM
VNELRFLRHVKEFITPPIDVAIKIHEDNEGAIKMAKN
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mRNA from alignment at H-elongata_contig7998:5069..5779-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7998.15650.1 ID=mRNA_H-elongata_contig7998.15650.1|Name=mRNA_H-elongata_contig7998.15650.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=711bp|location=Sequence derived from alignment at H-elongata_contig7998:5069..5779- (Himanthalia elongata Himel1 dioecious)
TTCCCCATCAAGGATCTGGGGGAGGCTTCATATTACCTGGGATGCCACAT CACGTGGGACCGGAACGCCGGGACACTGAAGTTAGACCAGCATCAGTACA TACAGACTGTGGCTGAACGTTTTGGGGTGACGAAGACCAGCATCGTTCCG TCTGCGGCAGGAAGAAAAGCCCTTTCGAAATCAGACAGCCCGCAAACGGA CGCAGAGATTGAAGAAATGCGCCAGATTTCCTGCCGAGAAATTGTTGGGG CCCTAATGTGGGCAGCGACGATGACCAAGCCCGACATTTCATTCGCTGCG CATCAACTGGCAAAATTCAACGACAACCCGGGACCGACACAGTGGAGGGC AGCTCAGAAAGTGCTGCAATATTTATGGCGCACTCGGGACCTCGGGATCA CCTACGGAGGGGAACCGGGGGGGGAGACCAAGTTATTAGCATGGATCGAC GAAGACTACGGCACCTGCCCGGACACGTGTCGCTCAGTGTCGGGAGGGGC GGTGATGATGGCTGGCGGGGCCATTATCTGGTTCTCACGAGTGCAAAAGG TAACGGCGGCGGCGTCCTCCGAATCGGAATACGTCGCGCTGGCTAAGATG GTAAACGAATTGCGTTTCTTACGGCATGTCAAGGAGTTCATAACCCCTCC AATCGACGTCGCCATCAAGATACACGAGGACAACGAAGGCGCAATCAAGA TGGCAAAAAAC
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Coding sequence (CDS) from alignment at H-elongata_contig7998:5069..5779-

>mRNA_H-elongata_contig7998.15650.1 ID=mRNA_H-elongata_contig7998.15650.1|Name=mRNA_H-elongata_contig7998.15650.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1422bp|location=Sequence derived from alignment at H-elongata_contig7998:5069..5779- (Himanthalia elongata Himel1 dioecious)
TTCCCCATCAAGGATCTGGGGGAGGCTTCATATTACCTGGGATGCCACAT
CACGTGGGACCGGAACGCCGGGACACTGAAGTTAGACCAGCATCAGTACA
TACAGACTGTGGCTGAACGTTTTGGGGTGACGAAGACCAGCATCGTTCCG
TCTGCGGCAGGAAGAAAAGCCCTTTCGAAATCAGACAGCCCGCAAACGGA
CGCAGAGATTGAAGAAATGCGCCAGATTTCCTGCCGAGAAATTGTTGGGG
CCCTAATGTGGGCAGCGACGATGACCAAGCCCGACATTTCATTCGCTGCG
CATCAACTGGCAAAATTCAACGACAACCCGGGACCGACACAGTGGAGGGC
AGCTCAGAAAGTGCTGCAATATTTATGGCGCACTCGGGACCTCGGGATCA
CCTACGGAGGGGAACCGGGGGGGGAGACCAAGTTATTAGCATGGATCGAC
GAAGACTACGGCACCTGCCCGGACACGTGTCGCTCAGTGTCGGGAGGGGC
GGTGATGATGGCTGGCGGGGCCATTATCTGGTTCTCACGAGTGCAAAAGG
TAACGGCGGCGGCGTCCTCCGAATCGGAATACGTCGCGCTGGCTAAGATG
GTAAACGAATTGCGTTTCTTACGGCATGTCAAGGAGTTCATAACCCCTCC
AATCGACGTCGCCATCAAGATACACGAGGACAACGAAGGCGCAATCAAGA
TGGCAAAAAACTTCCCCATCAAGGATCTGGGGGAGGCTTCATATTACCTG
GGATGCCACATCACGTGGGACCGGAACGCCGGGACACTGAAGTTAGACCA
GCATCAGTACATACAGACTGTGGCTGAACGTTTTGGGGTGACGAAGACCA
GCATCGTTCCGTCTGCGGCAGGAAGAAAAGCCCTTTCGAAATCAGACAGC
CCGCAAACGGACGCAGAGATTGAAGAAATGCGCCAGATTTCCTGCCGAGA
AATTGTTGGGGCCCTAATGTGGGCAGCGACGATGACCAAGCCCGACATTT
CATTCGCTGCGCATCAACTGGCAAAATTCAACGACAACCCGGGACCGACA
CAGTGGAGGGCAGCTCAGAAAGTGCTGCAATATTTATGGCGCACTCGGGA
CCTCGGGATCACCTACGGAGGGGAACCGGGGGGGGAGACCAAGTTATTAG
CATGGATCGACGAAGACTACGGCACCTGCCCGGACACGTGTCGCTCAGTG
TCGGGAGGGGCGGTGATGATGGCTGGCGGGGCCATTATCTGGTTCTCACG
AGTGCAAAAGGTAACGGCGGCGGCGTCCTCCGAATCGGAATACGTCGCGC
TGGCTAAGATGGTAAACGAATTGCGTTTCTTACGGCATGTCAAGGAGTTC
ATAACCCCTCCAATCGACGTCGCCATCAAGATACACGAGGACAACGAAGG
CGCAATCAAGATGGCAAAAAAC
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