mRNA_H-elongata_contig79925.15640.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig79925.15640.1
Unique NamemRNA_H-elongata_contig79925.15640.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig79925.15640.1 vs. uniprot
Match: A0A6H5J9S4_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S4_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 2.780e-70
Identity = 142/287 (49.48%), Postives = 168/287 (58.54%), Query Frame = 1
Query:   91 MDMKTFQAYFLSHAAFVVRVIPSPHNAPPIGTPPGS------------------RVNRDGSNGPGTGR------CADEVRHGESEG----GAKRPTEGGDTQPAE-----RPLKAVE-----------------------AEAR-----ESGKGENLP------------KVWGAFYVKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKELGYRASYFNLVFRTNEASVRLWRGLGFKELAVIPRAGRLKGIEGLVDAIQYHFDLDQLCLEDLPRELQ 732
            MD+  F+AYFLSHAAFVVR +PSP +A P  T  G+                   V R+G  G    R      C+     GE+ G       R +EG  + P E      P ++V                        AEA      E+GK  +              KVWG FY+KPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAK+LGYRASYFNLVFR+NEAS+RLWRGLGF ELAV+P+A RLKGI+GLVDA Q+H+DLD L  EDLP++L+
Sbjct:    1 MDIDAFRAYFLSHAAFVVRAVPSPPSAKPPPTAAGAPSSGDGARVCTAGDSSRDTVGREGGGGDRAARGEEGAPCSPGGVAGEAAGPTGFSEVRSSEGLMSPPGELASLCSPERSVRSSGAATGCSPEDRAVAAAATSAAAEAATIGSDETGKAGSTAVGEEDDERDAGVKVWGTFYIKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKDLGYRASYFNLVFRSNEASLRLWRGLGFTELAVVPKAARLKGIDGLVDASQFHYDLDNLRQEDLPQDLR 287          
BLAST of mRNA_H-elongata_contig79925.15640.1 vs. uniprot
Match: D7FSN4_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN4_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 2.210e-60
Identity = 132/266 (49.62%), Postives = 153/266 (57.52%), Query Frame = 1
Query:   91 MDMKTFQAYFLSHAAFVVRVIPS-PHNAPPI---GTPP---GSRV-----------NRDGSNGPGT---------------GRCADEVRHGE---SEGGAKRPTEGGDTQPAERPLKAVEA----------------------------EARESG----------KGENLPKVWGAFYVKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKELGYRASYFNLVFRTNEASVRLWRGLGFKELAVIPRAGRLKGIEGLV 666
            MDM+ F+AYFLSHAAFVVR +PS P   PP+   G P    G+RV            R+G  G G                G  A    H E   SEG    P E   + P ER +++  A                            EAR +G          + +   KVWGAFY+KPNFPGRCSHVCNGGFITDPRRR+RGVARLMGHAFLRFAK+LGYRASYFNLVFR+NEAS+RLWRGLGF ELAV+P+A RLKGI+GLV
Sbjct:    1 MDMEAFRAYFLSHAAFVVRAVPSSPPIEPPLTAAGAPSSGGGARVCTAGDSSRDTVGREGGGGDGAACGEEGAPCSPGGVAGDAAGPTGHSEVRSSEGLMSPPGELASSCPPERSVRSSGAATGCSPEDRAVAXXXXXXXXXXXXIGSDEARNAGSTAVEEEEDNERDAGMKVWGAFYIKPNFPGRCSHVCNGGFITDPRRRQRGVARLMGHAFLRFAKDLGYRASYFNLVFRSNEASLRLWRGLGFTELAVVPKAARLKGIDGLV 266          
BLAST of mRNA_H-elongata_contig79925.15640.1 vs. uniprot
Match: A0A0L0FJK2_9EUKA (N-acetyltransferase domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FJK2_9EUKA)

HSP 1 Score: 163 bits (413), Expect = 1.960e-46
Identity = 98/234 (41.88%), Postives = 122/234 (52.14%), Query Frame = 1
Query:    1 NYHRLRDHQAGLRLMNIVIEEGLSWPFEETMD-MKTFQAYFLSHAAFVVRVIPSPHNAPPIGTPPGSRVNRDGSNGPGTGRCADEVRHGESEGGAKRPTEGGDTQPAERPLKAVEAEARESGKGENLPK--VWGAFYVKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKELGYRASYFNLVFRTNEASVRLWRGLGFKELAVIPRAGRLKGIEGLVDAIQYHFDL 693
            ++ R  +++ G  LMN +I EG SWPF    D +  F+ YFLSHAAFVVRV   P           S +  + S G   G                                             +L K  + G FYVKPNFP RCS +CNGGFIT+P  RRRGVA+LMG  + R AK+LGYR   FNLVF +NEAS+RLW GLGF  LA +P+   LKGI+G  DA QY+ +L
Sbjct:   38 DFFREDEYEQGFTLMNQIIVEGQSWPFMHAYDSVDAFRCYFLSHAAFVVRVCDVPEK---FTKATDSTIVENASTGTDLGTV-------------------------------------------DLRKDAILGCFYVKPNFPDRCSGICNGGFITNPMARRRGVAKLMGKLYCRLAKDLGYRGCLFNLVFASNEASLRLWDGLGFTRLACLPQCAELKGIDGFTDAYQYYRNL 225          
BLAST of mRNA_H-elongata_contig79925.15640.1 vs. uniprot
Match: A0A835ZBA6_9STRA (Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBA6_9STRA)

HSP 1 Score: 159 bits (402), Expect = 6.430e-46
Identity = 72/106 (67.92%), Postives = 86/106 (81.13%), Query Frame = 1
Query:  385 VWGAFYVKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKELGYRASYFNLVFRTNEASVRLWRGLGFKELAVIPRAGRLKGIEGLVDAIQYHFDLDQL 702
            V G FY+KPNFPGRCSH+CNGGFIT+P  R RGV  LM  AFL  A+++GY+ASYFNLVF  N AS  LW GLGF  LAV+P+AGRLKG++GLVDAIQY++DL+ L
Sbjct:   27 VMGVFYIKPNFPGRCSHICNGGFITEPAFRGRGVGTLMAKAFLWLARDIGYKASYFNLVFANNAASQALWDGLGFTRLAVVPKAGRLKGVDGLVDAIQYYYDLESL 132          
BLAST of mRNA_H-elongata_contig79925.15640.1 vs. uniprot
Match: B8BXU1_THAPS (N-acetyltransferase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXU1_THAPS)

HSP 1 Score: 160 bits (404), Expect = 4.050e-45
Identity = 94/228 (41.23%), Postives = 125/228 (54.82%), Query Frame = 1
Query:   28 AGLRLMNIVIEEGLSWPFEETMD-MKTFQAYFLSHAAFVVRVIPSPHNAPPIGTPPGSRVNRDGSNGPGTGRCADEVRHGESEGGAKRPTEGGDTQPAERPLKAVEAEARESGKGENLPKVWGAFYVKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKELGYRASYFNLVFRTNEASVRLWRGLGFKELAVIPRAGRLKGI-EGLVD-AIQYHFDLDQL 702
            AGL LMN++I EG SWPFEE    ++ +  YFLSH AFVVR + +  +A                                    +KR                       S KGE L    G FY+KPNFPGRCSH+CNGGFI  PR R  GV RLMG+ FLR +++LGY++SYFNLVF++N  S+ LW  LGF+ +A + +A RL+G+ EG++D A  Y +DL++L
Sbjct:   54 AGLALMNLIIREGRSWPFEEEFSSVEQYSGYFLSHTAFVVRALNNGMDA------------------------------------SKR---------------------NSSSKGEIL----GCFYIKPNFPGRCSHICNGGFIVAPRFRGLGVGRLMGNVFLRASRDLGYKSSYFNLVFKSNPGSIHLWESLGFQRVATLEKAARLEGMNEGVLDTAYGYRYDLEEL 220          
BLAST of mRNA_H-elongata_contig79925.15640.1 vs. uniprot
Match: A0A7S2XXY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXY2_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.090e-44
Identity = 71/111 (63.96%), Postives = 91/111 (81.98%), Query Frame = 1
Query:  364 KGENLPKVWGAFYVKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKELGYRASYFNLVFRTNEASVRLWRGLGFKELAVIPRAGRLKGIEGLVDAIQYHFDLD 696
            K E   +V G FY+KPNFPGRCSH+CNGGFIT P  RR G+A+LMGH FLR AK+LGY+ASYFNLVF TN AS++LW+ LGF+ +A +P+A RLKGI+G  DA+Q+++DL+
Sbjct:  131 KAEEPSEVLGMFYIKPNFPGRCSHICNGGFITLPEYRRLGIAKLMGHNFLRMAKDLGYKASYFNLVFVTNTASIKLWKKLGFRCIARVPKAARLKGIDGCTDALQFYYDLE 241          
BLAST of mRNA_H-elongata_contig79925.15640.1 vs. uniprot
Match: K0SB75_THAOC (N-acetyltransferase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SB75_THAOC)

HSP 1 Score: 161 bits (407), Expect = 9.330e-44
Identity = 100/232 (43.10%), Postives = 126/232 (54.31%), Query Frame = 1
Query:   28 AGLRLMNIVIEEGLSWPFEETM-DMKTFQAYFLSHAAFVVRVIPSPHNAPPIGTPPGSRVNRDGSNGPGTGRCADEVRHGESEGGAKRPTEGGDTQPAERPLKAVEAEARESGKGENLPKVWGAFYVKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKELGYRASYFNLVFRTNEASVRLWRGLGFKELAVIPRAGRLKGI-EGLVD-AIQYHFDLDQLCLED 714
            AGL LMN+VI EG SWPFEE    +  ++ YFLSH AFVVR +                             C ++                           + +  +R S KGE    V G FY+KPNFPGRCSHVCNGGFIT PR R  GV RLMG+ FLR A++LGY++SYFNLVF++N  SV+LW  LGF+ +A +  A RL+G+ EG +D A  Y FDL+    ED
Sbjct:  215 AGLALMNLVIREGRSWPFEEDFTSIDGWRGYFLSHTAFVVRSLD----------------------------CGED---------------------------STDKHSR-STKGE----VLGCFYIKPNFPGRCSHVCNGGFITAPRFRSLGVGRLMGNVFLRAARDLGYKSSYFNLVFKSNGGSVKLWESLGFERVATLENAARLEGLDEGELDTAYGYRFDLENKLPED 386          
BLAST of mRNA_H-elongata_contig79925.15640.1 vs. uniprot
Match: A0A0G4I973_9ALVE (N-acetyltransferase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I973_9ALVE)

HSP 1 Score: 156 bits (395), Expect = 1.420e-43
Identity = 98/226 (43.36%), Postives = 125/226 (55.31%), Query Frame = 1
Query:   19 DHQAGLRLMNIVIEEGLSWPFEETMDMKTFQAYFLSHAAFVVRVIPSPHNAPPIGTPPGSRVNRDGSNGPGTGRCADEVRHGESEGGAKRPTEGGDTQPAERPLKAVEAEARESGKGENLPKVWGAFYVKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKELGYRASYFNLVFRTNEASVRLWRGLGFKELAVIPRAGRLKGIEGLVDAIQYHFDLD 696
            D  A  ++ +  +EEG S+P E  +D   F+AYFLSH   V RV            P     + DG+ GP      D V  GE         E G       P+    AE+ E      +    GA Y+KPNFPGRCSH+CNGGF+ DP  RR+GV   +G  F+R A  LGYRA++FNLVF  N AS+RLW  LGFK++ +IPRAGRLKG+ G VDA QYH + +
Sbjct:   42 DFDAVHKMFSYALEEGNSFPQEGPVDAAGFRAYFLSHDVLVCRVKTK--------RPSKENESADGAAGP------DGVPLGEMAVVTSTSAETG------APVGEKAAESAE------MKTTIGAVYIKPNFPGRCSHICNGGFLVDPLWRRKGVGSALGEYFVRVAPLLGYRAAFFNLVFAQNTASMRLWEKLGFKKIGLIPRAGRLKGL-GFVDAWQYHMEFE 240          
BLAST of mRNA_H-elongata_contig79925.15640.1 vs. uniprot
Match: A0A7S2H5G4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H5G4_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.110e-42
Identity = 69/110 (62.73%), Postives = 84/110 (76.36%), Query Frame = 1
Query:  373 NLPKVWGAFYVKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKELGYRASYFNLVFRTNEASVRLWRGLGFKELAVIPRAGRLKGIEGLVDAIQYHFDLDQL 702
            N  K+ G FYVKPNFPGRCSHVCNGGFITDP+ R  GV RLMG +FL  A++L Y+++YFNLVF++N  S+RLW  LGF  +A IP A RL+G+EGL DA  Y+FDL  L
Sbjct:   37 NPGKILGTFYVKPNFPGRCSHVCNGGFITDPQFRSIGVGRLMGSSFLALARDLQYKSAYFNLVFKSNPVSIRLWESLGFTRVATIPNAARLEGVEGLDDAYGYYFDLTGL 146          
BLAST of mRNA_H-elongata_contig79925.15640.1 vs. uniprot
Match: R7QNK1_CHOCR (N-Acyltransferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNK1_CHOCR)

HSP 1 Score: 149 bits (375), Expect = 1.010e-40
Identity = 92/231 (39.83%), Postives = 113/231 (48.92%), Query Frame = 1
Query:   19 DHQAGLRLMNIVIEEGLSWPFEETMDMKTFQAYFLSHAAFVVRVIPSPHNAPPIGTPPGSRVNRDGSNGPGTGRCADEVRHGESEGGAKRPTEGGDTQPAERPLKAVEAEARESGKGENLPKVWGAFYVKPNFPGRCSHVCNGGFITDPRRRRRGVARLMGHAFLRFAKELGYRASYFNLVFRTNEASVRLWRGLGFKELAVIPRAGRLKGIEGLVDAIQYHFDLDQLCLE 711
            D  A   L+N VI+EG+SWPFE  +    F++YF SH A V R                   N  G+                                                       V GAFY KPNFPGRC+H CNGGFITDP  RR+GVA LMG  FL+ AK+L ++A  FNLVF +N AS+RLW  LGFK+LA +PR G L+  EG  DAIQY++DL+  C E
Sbjct:   48 DIAAVRTLLNDVIKEGMSWPFERPLTDFEFRSYFFSHTALVAR-------------------NSSGA-------------------------------------------------------VIGAFYCKPNFPGRCAHYCNGGFITDPGYRRQGVASLMGTVFLQVAKDLEFKAVLFNLVFSSNVASLRLWEKLGFKKLARLPRVGNLR--EGYSDAIQYYYDLENGCRE 202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79925.15640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9S4_9PHAE2.780e-7049.48N-acetyltransferase domain-containing protein n=1 ... [more]
D7FSN4_ECTSI2.210e-6049.62N-acetyltransferase domain-containing protein n=1 ... [more]
A0A0L0FJK2_9EUKA1.960e-4641.88N-acetyltransferase domain-containing protein n=1 ... [more]
A0A835ZBA6_9STRA6.430e-4667.92Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus... [more]
B8BXU1_THAPS4.050e-4541.23N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S2XXY2_9STRA1.090e-4463.96Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
K0SB75_THAOC9.330e-4443.10N-acetyltransferase domain-containing protein n=1 ... [more]
A0A0G4I973_9ALVE1.420e-4343.36N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S2H5G4_9STRA4.110e-4262.73Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
R7QNK1_CHOCR1.010e-4039.83N-Acyltransferase n=1 Tax=Chondrus crispus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig79925contigH-elongata_contig79925:332..2880 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score206.5
Seed ortholog evalue1.5e-50
Seed eggNOG ortholog2880.D7FSN4
Preferred nameSPT10
GOsGO:0000122,GO:0000183,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003824,GO:0004402,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006082,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006357,GO:0006464,GO:0006473,GO:0006475,GO:0006520,GO:0006525,GO:0006526,GO:0006560,GO:0006562,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010484,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016053,GO:0016054,GO:0016407,GO:0016410,GO:0016458,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0030466,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032931,GO:0033554,GO:0034212,GO:0034641,GO:0036211,GO:0040029,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0043543,GO:0043565,GO:0043966,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046394,GO:0046395,GO:0046483,GO:0046700,GO:0046941,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051716,GO:0060255,GO:0061733,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097043,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1902679,GO:1903506,GO:1903507,GO:1990841,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.N-acetyltransferase activity
EggNOG OGs2QRFX@2759,COG0454@1
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-07_002520.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size738
Cds size738
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig79925.15640.1prot_H-elongata_contig79925.15640.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig79925 332..2880 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931203.9881527-CDS-H-elongata_contig79925:331..4061622931203.9881527-CDS-H-elongata_contig79925:331..406Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79925 332..406 -
1691679740.3295093-CDS-H-elongata_contig79925:331..4061691679740.3295093-CDS-H-elongata_contig79925:331..406Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79925 332..406 -
1622931204.0044687-CDS-H-elongata_contig79925:901..10061622931204.0044687-CDS-H-elongata_contig79925:901..1006Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79925 902..1006 -
1691679740.345125-CDS-H-elongata_contig79925:901..10061691679740.345125-CDS-H-elongata_contig79925:901..1006Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79925 902..1006 -
1622931204.0197315-CDS-H-elongata_contig79925:1686..21811622931204.0197315-CDS-H-elongata_contig79925:1686..2181Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79925 1687..2181 -
1691679740.3571818-CDS-H-elongata_contig79925:1686..21811691679740.3571818-CDS-H-elongata_contig79925:1686..2181Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79925 1687..2181 -
1622931204.039181-CDS-H-elongata_contig79925:2817..28801622931204.039181-CDS-H-elongata_contig79925:2817..2880Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79925 2818..2880 -
1691679740.3671715-CDS-H-elongata_contig79925:2817..28801691679740.3671715-CDS-H-elongata_contig79925:2817..2880Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig79925 2818..2880 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig79925.15640.1

>prot_H-elongata_contig79925.15640.1 ID=prot_H-elongata_contig79925.15640.1|Name=mRNA_H-elongata_contig79925.15640.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=246bp
NYHRLRDHQAGLRLMNIVIEEGLSWPFEETMDMKTFQAYFLSHAAFVVRV
IPSPHNAPPIGTPPGSRVNRDGSNGPGTGRCADEVRHGESEGGAKRPTEG
GDTQPAERPLKAVEAEARESGKGENLPKVWGAFYVKPNFPGRCSHVCNGG
FITDPRRRRRGVARLMGHAFLRFAKELGYRASYFNLVFRTNEASVRLWRG
LGFKELAVIPRAGRLKGIEGLVDAIQYHFDLDQLCLEDLPRELQG*
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mRNA from alignment at H-elongata_contig79925:332..2880-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig79925.15640.1 ID=mRNA_H-elongata_contig79925.15640.1|Name=mRNA_H-elongata_contig79925.15640.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2549bp|location=Sequence derived from alignment at H-elongata_contig79925:332..2880- (Himanthalia elongata Himel1 dioecious)
AACTATCATCGCCTCAGGGACCACCAAGCCGGGCTTCGACTCATGAACAT CGTCATTGAAGAGGTAGGTTTCCCACATCCTCGCGGGAATACCAATACCC CATCCCATCCCATCCCACCCCCACTCCTTTCCACTTGTTGTATTACAATC AGACTGCTGTGCTGTAGACGCACCGATGTCGCAAGCTGTCACCGGCATTA TTCATGATCTTGGCGGATGGTAACATGCCCTCAACCCCTCTCGCGCTTAC GGCGTTTGTTCTTTTGGCGAGTCCATGCGCAGTTTCCGGGATAATCGTGT AGGGGTATACACCCACCCACACATCCCCCGGTTGGGAGTGGAGTTGTAAC GGTTCACCGTGAAAATCCGCCGCATTATCTAGCTGCTTGTGGGCACTGAA GGTTTGTTAACGAGCTCAGCCACGAAGCCGCGCCCGCGATATCATATATA AGTGTCTCGTCTAAATTGAAAATCCAGTTTATGCCGTTGCCTCGCGCACA AACCTCGTGCTCAACACAGAACTGCCGTGTATCGCTTCAAGGCCGAGTCG CAGGCGCTCTTGTCGACTCTTTCATATACAAGCGCGAGGGGCACGCTCGT GATGGGGCGCCGAGATTATCTAGCGAGCGTCCTTGAGAACGTGCAACGGC CCTCCGCCTCCAACACAGCACCCTTCTCGTGCGCGCGCGTGCATCGCAGG GGTTGTCTTGGCCGTTCGAGGAAACCATGGATATGAAAACGTTCCAGGCG TACTTTCTCTCCCACGCGGCCTTTGTCGTCCGCGTCATTCCCTCCCCGCA TAACGCCCCTCCTATTGGAACTCCCCCCGGCAGCCGTGTGAACCGCGACG GTTCTAACGGCCCAGGGACCGGGCGTTGTGCAGACGAGGTACGGCATGGT GAAAGCGAAGGCGGCGCGAAGAGGCCCACGGAGGGAGGGGATACACAGCC GGCCGAACGGCCCCTCAAAGCCGTGGAAGCTGAGGCGAGAGAGAGCGGCA AGGGCGAAAATCTCCCCAAGGTCTGGGGCGCGTTTTACGTGAAGCCTAAC TTTCCCGGGAGGTGCTCGCATGTTTGCAACGGGGGATTTATCACGGATCC TCGAAGAAGACGGCGAGGCGTGGCGCGATTGATGGGGCACGCGTTCTTGA GGTTCGCCAAGGAACTGGGTTACAGGGCGAGCTACTTCAACCTGGTGTGT GCAAATTTATATGTATATATAGAGAGATATAGAGGAGTTTAATGACGCCG TTTTTGAGCGATGGCTATACCGTAGTCTACGTGTCGCGCTTGAACAGCTG CACCATAGCCACGCTGCACGGTTGAACATCGGGAAGAAAGAATCGCGCGG TATCGCTATCGGGGGTCATATCGCTATTAAGACACTTAGCGTTTTTCGGG AAGTGCTCCGTGGTAACCCTCCGTTCGAGCATCGTCGGGGGGCGAAGGGT TCATCGGCTTGGCCTGGTACTCGCTTCCTTCCCCTCTCTCTTCCTCCTTC CCTCCCTCGTAAGGAGGACGGCGACACTAGCCTACCAAATCGGCTATCCT GAGGCTGAGCCTGCGCTTAAGCATAAGGGGAGGGAGGACTTCATCATCGA TATCGCCCGGCCGTCAGCCGATAGGCAACGCCGAGGCTTAACGAGGGGTT AAGACCGTTTTTTTGTAGACCCTTTGGTGTGTATTGCCTTGTTCCTGTCG CCGACGAAGGCTTTCAGCATCATTCATGACATCGTACCAGGCACTTCGTC TCATATGGTGGTTATGATGGCTATGATGGTTACGGGGTGATAGATAGGAG GATCGGGCACACGCGCCTCGCGCAGTTTCCGATCCCGTATCCCCTGTTCG ATGCCGCTACACCGTGTAGCGTAGGTTTTCCGCACCAACGAGGCCTCGGT TCGATTGTGGCGAGGGCTGGGTTTCAAGGAGCTGGCGGTTATCCCAAGGG CTGGCCGCCTAAAGGGGATAGAGGGCTTGGTGAGTCCAAGAGTGGCACGC GTTGGCGAATGAATGAATGCCAGCAAGGTCTTAGTAATGGGGAGCATTCT CGACTGTCGAGTGTCGAGTGTTTTTATCTTTCTCTCCAAAGGTGGAGTGC GCAGTTTGAAATCGATGCTCTTTCGGCTGGCGTCTATTCTTCAGGTTCCT CAGGGGAAGTTCGTTTGTTTCCAAGATACCGCAAGGTTTCTTCCGCCTAG GCTCCCGAGCTCTAGCCCTTCGTCCCAACTGTCGAGAGCACAAATGCCTG GCCAGGGCGTTTCACCCGTTCATTGTCTATCCGCAGACAAGGCGTTGCTC AGACGGGGAGGGGGGGAGGGGGGGTGCTTGATGATATCCACCAGGTTGAC ACATTTCGAGCTATTTGGTGTTCCCAGACTAGTAGGCGTTTTATGGCCCC ACGTTTGGAATGAACGATGTACCGCCGCCGCCGTTCTGTGCGTGTACCTG TTCGCCATGAAACGCTCAACGCAGGTTGACGCCATCCAGTACCACTTTGA CTTAGATCAACTCTGCCTCGAAGATCTTCCGAGGGAACTTCAAGGGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig79925:332..2880-

>mRNA_H-elongata_contig79925.15640.1 ID=mRNA_H-elongata_contig79925.15640.1|Name=mRNA_H-elongata_contig79925.15640.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1476bp|location=Sequence derived from alignment at H-elongata_contig79925:332..2880- (Himanthalia elongata Himel1 dioecious)
AACTATCATCGCCTCAGGGACCACCAAGCCGGGCTTCGACTCATGAACAT
CGTCATTGAAGAGAACTATCATCGCCTCAGGGACCACCAAGCCGGGCTTC
GACTCATGAACATCGTCATTGAAGAGGGGTTGTCTTGGCCGTTCGAGGAA
ACCATGGATATGAAAACGTTCCAGGCGTACTTTCTCTCCCACGCGGCCTT
TGTCGTCCGCGTCATTCCCTCCCCGCATAACGCCCCTCCTATTGGAACTC
CCCCCGGCAGCCGTGTGAACCGCGACGGTTCTAACGGCCCAGGGACCGGG
CGTTGTGCAGACGAGGTACGGCATGGTGAAAGCGAAGGCGGCGCGAAGAG
GCCCACGGAGGGAGGGGATACACAGCCGGCCGAACGGCCCCTCAAAGCCG
TGGAAGCTGAGGCGAGAGAGAGCGGCAAGGGCGAAAATCTCCCCAAGGTC
TGGGGCGCGTTTTACGTGAAGCCTAACTTTCCCGGGAGGTGCTCGCATGT
TTGCAACGGGGGATTTATCACGGATCCTCGAAGAAGACGGCGAGGCGTGG
CGCGATTGATGGGGCACGCGTTCTTGAGGTTCGCCAAGGAACTGGGTTAC
AGGGCGAGCTACTTCAACCTGGGGTTGTCTTGGCCGTTCGAGGAAACCAT
GGATATGAAAACGTTCCAGGCGTACTTTCTCTCCCACGCGGCCTTTGTCG
TCCGCGTCATTCCCTCCCCGCATAACGCCCCTCCTATTGGAACTCCCCCC
GGCAGCCGTGTGAACCGCGACGGTTCTAACGGCCCAGGGACCGGGCGTTG
TGCAGACGAGGTACGGCATGGTGAAAGCGAAGGCGGCGCGAAGAGGCCCA
CGGAGGGAGGGGATACACAGCCGGCCGAACGGCCCCTCAAAGCCGTGGAA
GCTGAGGCGAGAGAGAGCGGCAAGGGCGAAAATCTCCCCAAGGTCTGGGG
CGCGTTTTACGTGAAGCCTAACTTTCCCGGGAGGTGCTCGCATGTTTGCA
ACGGGGGATTTATCACGGATCCTCGAAGAAGACGGCGAGGCGTGGCGCGA
TTGATGGGGCACGCGTTCTTGAGGTTCGCCAAGGAACTGGGTTACAGGGC
GAGCTACTTCAACCTGGTTTTCCGCACCAACGAGGCCTCGGTTCGATTGT
GGCGAGGGCTGGGTTTCAAGGAGCTGGCGGTTATCCCAAGGGCTGGCCGC
CTAAAGGGGATAGAGGGCTTGGTTTTCCGCACCAACGAGGCCTCGGTTCG
ATTGTGGCGAGGGCTGGGTTTCAAGGAGCTGGCGGTTATCCCAAGGGCTG
GCCGCCTAAAGGGGATAGAGGGCTTGGTTGACGCCATCCAGTACCACTTT
GACTTAGATCAACTCTGCCTCGAAGATCTTCCGAGGGAACTTCAAGGGTA
AGTTGACGCCATCCAGTACCACTTTGACTTAGATCAACTCTGCCTCGAAG
ATCTTCCGAGGGAACTTCAAGGGTAA
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