mRNA_H-elongata_contig798.15632.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig798.15632.1
Unique NamemRNA_H-elongata_contig798.15632.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig798.15632.1 vs. uniprot
Match: D8LQ57_ECTSI (DUF1990 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ57_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 1.130e-100
Identity = 156/273 (57.14%), Postives = 190/273 (69.60%), Query Frame = 1 
Query:    4 FVFMREPSASFLERFLRHQDTERAKINHPYAGFTDPAARGSDVDSPPSLPPSFQERTVRVRLGSGKIIYEQGKKALLLWRMHDGSSWARIKLGRRLEGQDSQPNMVTVAKALGGLVWCVNPCRVLYEREDARFRFLAPPASEGEDYASRGWTKYSDGVKAPGNGGEEQGWLWNGEAPLTAPPWARFSSGGDHMGKQTAVAYATGEGHLIEGEERMRVVWFGGRGGDDSVWFEVYSISRGAGCVGGILFPLVQSMQRRFFREQAETIRRVVDES 822
            F F REPSAS + R+L  QDTE++ +NH +AGF+D AA              FQERTVR  LGSGK  Y +G++ALL W+MH+GSSWARI LG+R      Q N+VT+AKA  GLVWC+NPC+VLYER D   RF+APP ++       G  +  +  K    GG   G LW G+ P +AP WA F  G  H G+Q+AVAYAT  GHLI+GEERMRV+ F G GGDDSVWFEVYS+SRGAG VGG++FP VQSMQRRFFREQAET++RVV+ S
Sbjct:   24 FTFFREPSASVVRRYLERQDTEQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERTVRAHLGSGKETYARGREALLRWQMHEGSSWARIFLGQRPPRPALQRNLVTIAKACAGLVWCINPCQVLYERNDVALRFIAPPGADANRSLDDGEARPVENTKRVMGGGG--GALWAGKRPTSAPSWASFLPGVKHKGRQSAVAYATKMGHLIQGEERMRVLHFCGPGGDDSVWFEVYSVSRGAGLVGGLVFPFVQSMQRRFFREQAETMKRVVNSS 294
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BLAST of mRNA_H-elongata_contig798.15632.1 vs. uniprot
Match: A0A835Z0Y9_9STRA (DUF1990 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Y9_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 4.530e-19
Identity = 63/191 (32.98%), Postives = 88/191 (46.07%), Query Frame = 1 
Query:  244 MHDGSSWARIKLGRRLEGQDSQPNMVTVAKALGGLVWCVNPCRVLYEREDARFRFLAPPASEGEDYASRGWTKYSDGVKAPGNGGEEQGWLWNGEAPLTAPPWARFSSG--GDHMGKQTAVAYATGEGHLIEGEERMRVVWFGGRGGDDSVWFEVYSISRGAGCVGGILFPLVQSMQRRFFREQAETIRRV 810
            +H+GS    I  G       +   + T++ ALGG++WC+NPC   Y   D  +  +    S+  D +          V+                         RF     G   G QTA+AY T  GH  EGEER+RVVW     G   VWFEV+S+SRG G  G  +FPL++  QRRFF +Q + + R+
Sbjct:   32 VHEGSPATSIFTG-------NNGYLCTISAALGGIMWCMNPCLTQYAVTDTPYTCVVNRGSKATDSSGANSNLQCQQVRK------------------------RFPDAQRGRPRGMQTAIAYCTVRGHWFEGEERVRVVWEHDSHGH--VWFEVWSLSRGHGWWGAAIFPLMRRTQRRFFEDQVDAMVRL 189
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BLAST of mRNA_H-elongata_contig798.15632.1 vs. uniprot
Match: A0A2P6VI37_9CHLO (DUF1990 domain-containing protein n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VI37_9CHLO)

HSP 1 Score: 78.2 bits (191), Expect = 7.250e-13
Identity = 67/226 (29.65%), Postives = 98/226 (43.36%), Query Frame = 1 
Query:  178 RVRLGSGKIIYEQGKKALLLWRMHDGSSWARIKLGRRLEGQDSQPNMVTVAKALGGLVWCVNPCRVLYEREDARFRFLAPPASEGEDYASRGWTKYSDGV----KAPGNGGEEQGWLWNGEAPLTAPPWARFSSGGDHM--GKQTAVAYATGEGHLIEGEERMRVVWFGGRGGDDSVWFEVYSISRGAGCVGGILFPLVQSMQRRFFREQAETIRRVVDESRDRAP 837
            RV+LG G+  Y + ++ L  W  H    WA +      EG      +V  AK L    W  NP R+ Y  E        PP +      ++G T+         ++P  G    G    G A   A    R S    H+  G++ A A+ T  GH I+GEER  V W      DDSVW+E+Y++SR    +     PL++  Q +F  +    ++R + E  D AP
Sbjct:   60 RVKLGQGRAAYRKAQRLLQRWH-HFDLGWASVNKAEMREGAP----VVVTAKTL--FAWSCNPLRISYVEERGLRGGQRPPWAPPPPPRAKGSTQLHTSCGGARESPSQGLARGG---GGRAEWAAAQ-ERSSGAAAHLPRGRRYAFAHTTLAGHQIQGEERFAVAW---NHEDDSVWYEIYTLSRPGNWLTTATHPLLRLFQHKFAADSMAAMQRGMAE--DEAP 269
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BLAST of mRNA_H-elongata_contig798.15632.1 vs. uniprot
Match: R1E3Q5_EMIHU (DUF1990 domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E3Q5_EMIHU)

HSP 1 Score: 72.0 bits (175), Expect = 6.550e-11
Identity = 39/74 (52.70%), Postives = 50/74 (67.57%), Query Frame = 1 
Query:  586 KQTAVAYATGEGHLIEGEERMRVVWFGGRGGDDSVWFEVYSISRGAGCVGGILFPLVQSMQRRFFREQAETIRR 807
            ++ +V Y+T  GHL+EGEE+M VVW       D V FEV S SRGAG +G +LFP + S QRRFFREQ   ++R
Sbjct:  136 RRCSVGYSTLSGHLLEGEEKMDVVW---SRETDEVAFEVVSHSRGAGPLGKLLFPALSSTQRRFFREQCRCMQR 206
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BLAST of mRNA_H-elongata_contig798.15632.1 vs. uniprot
Match: E1Z534_CHLVA (DUF1990 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z534_CHLVA)

HSP 1 Score: 70.1 bits (170), Expect = 5.150e-10
Identity = 68/257 (26.46%), Postives = 102/257 (39.69%), Query Frame = 1 
Query:   70 RAKINHPYAGFTDPAARGSDVDSPPSLPPSF--QERTV---RVRLGSGKIIYEQGKKALLLWRMHDGSSWARIKLGRRLEGQDSQPNMVTVAKALGGLVWCVNPCRVLYEREDARFRFLA--PPASEGEDYASRGWTKYSDGVKAPGNGGEEQGWLWNGEAPLTAPPWARFSSGGDHM----GKQTAVAYATGEGHLIEGEERMRVVWFGGRGGDDSVWFEVYSISRGAGCVGGILFPLVQSMQRRFFREQAETIRR 807
            R   N P+ G T          SPP LP +   +  T+   RV++G G+  Y + +  L  WR H    WA +           +P    V  A     W  NP R+ +  E    R     PP       A+ G +     +   G+G    G L  G                       G++ A A+ T +GH I GEER  V W      DDSVW+E+Y++SR    +     PL+++ QR+F  +  + ++R
Sbjct:   39 RLPFNFPHLGIT--------RTSPP-LPEAVAAESWTIDHNRVQVGRGQAAYRRARSLLEQWR-HFDLGWASVN------APPVKPGSPVVVTAFSLCCWSCNPLRISFVEEGGLRRNAQQLPPWVGAPPTAAEGASLRQQRLHGGGSG--VLGLLGTGXXXXXXXXXXXXXXXXXXXLPPRGRRFAFAHTTLQGHQIRGEERFCVAW---NAQDDSVWYEIYTLSRPGSWITAAAHPLLRAFQRKFAADSCDAMQR 274
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BLAST of mRNA_H-elongata_contig798.15632.1 vs. uniprot
Match: A0A2P6TVM3_CHLSO (Uncharacterized protein n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVM3_CHLSO)

HSP 1 Score: 63.2 bits (152), Expect = 1.310e-7
Identity = 64/246 (26.02%), Postives = 95/246 (38.62%), Query Frame = 1 
Query:  178 RVRLGSGKIIYEQGKKALLLWRMHDGSSWARIKLGRRLEGQDSQPNMVTVAKALGGLVWCVNPCRVLYEREDARFRFLAPPASEGEDYASRGWTKYSDGVKAPGNGGEEQGWLW------NGEAPLTAP-----------PWARF-----SSGGDHM--------------GKQTAVAYATGEGHLIEGEERMRVVWFGGRGGDDSVWFEVYSISRGAGCVGGILFPLVQSMQRRFFREQAETIRR 807
            RV+LG G+  Y + ++ L  WR H    WA +      +G      +V  A+ L  L W  NP R+ +  E A    L P   +    A+R      +G  + G+G              NG                  P AR         G                 G++ A A+ T  GH I GEER  V W      DDSVW+E+Y++SR    +     PL+++ QR+F  +    ++R
Sbjct:   60 RVQLGRGQAAYRKAQRLLQQWR-HFDLGWASVNAPPVKQGAP----VVVTARTL--LCWSCNPLRISFVEEGA----LRPGQLQPWAGANRSGAGAKNGKSSKGSGXXXXXXXXXXXXRKNGNVAXXXXXXXXXXXXXXDPLARLLGVLTRGAGSRAXXXXXXAAVVRAPRGRRYAFAHTTLAGHQISGEERFAVAW---NHEDDSVWYEIYTLSRPGSWITAATHPLLRAFQRKFAADSMAAMQR 291
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BLAST of mRNA_H-elongata_contig798.15632.1 vs. uniprot
Match: A0A6H5L025_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L025_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 9.000e-7
Identity = 27/57 (47.37%), Postives = 34/57 (59.65%), Query Frame = 1 
Query:    4 FVFMREPSASFLERFLRHQDTERAKINHPYAGFTDPAARGSDVDSPPSLPPSFQERT 174
            F F REPSASF+ R+L  QDT ++ +NH +AGF+D AA              FQERT
Sbjct:   24 FTFFREPSASFVRRYLERQDTGQSPVNHAFAGFSDIAAAXXXXXXXXXXXQGFQERT 80
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BLAST of mRNA_H-elongata_contig798.15632.1 vs. uniprot
Match: A0A5J4Y186_9CHLO (DUF1990 domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y186_9CHLO)

HSP 1 Score: 56.2 bits (134), Expect = 5.670e-6
Identity = 27/82 (32.93%), Postives = 48/82 (58.54%), Query Frame = 1 
Query:  583 GKQTAVAYATGEGHLIEGEERMRVVWFGGRGGDDSVWFEVYSISRGAGCVGGILFPLVQSMQRRFFREQAETIRRVVDESRD 828
            G+Q   A++T  GH + GEER  V W      DDSVW+++Y++SR A  +  I +P+++ +Q++F ++  + +      S D
Sbjct:   82 GQQLKYAHSTLHGHALAGEERFAVEW---HKEDDSVWYDIYTVSRPATPLAAISYPVIRLLQKQFQKDSFKVVTAAAAASAD 160
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BLAST of mRNA_H-elongata_contig798.15632.1 vs. uniprot
Match: I0YZW6_COCSC (DUF1990 domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZW6_COCSC)

HSP 1 Score: 55.5 bits (132), Expect = 2.470e-5
Identity = 35/98 (35.71%), Postives = 48/98 (48.98%), Query Frame = 1 
Query:  523 GEAPLTAPPWARFSSGGDHMGKQTAVAYATGEGHLIEGEERMRVVWFGGRGGDDSVWFEVYSISRGAGCVGGILFPLVQSMQRRFFREQAETIRRVVD 816
            G  P  A   AR        G +  +   T EGH + GEER  V W      DDSVW+E+Y+ISR A  +    +PL +  Q+RF RE    ++R  +
Sbjct:  122 GLIPAAAMLRARRQPACTSRGLRFDLGQTTLEGHSLAGEERFSVQW---SKEDDSVWYEIYAISRPATLLALASYPLTRYYQQRFRRESMAAVQRAAE 216
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig798.15632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LQ57_ECTSI1.130e-10057.14DUF1990 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835Z0Y9_9STRA4.530e-1932.98DUF1990 domain-containing protein n=1 Tax=Tribonem... [more]
A0A2P6VI37_9CHLO7.250e-1329.65DUF1990 domain-containing protein n=1 Tax=Micracti... [more]
R1E3Q5_EMIHU6.550e-1152.70DUF1990 domain-containing protein n=2 Tax=Emiliani... [more]
E1Z534_CHLVA5.150e-1026.46DUF1990 domain-containing protein n=1 Tax=Chlorell... [more]
A0A2P6TVM3_CHLSO1.310e-726.02Uncharacterized protein n=1 Tax=Chlorella sorokini... [more]
A0A6H5L025_9PHAE9.000e-747.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5J4Y186_9CHLO5.670e-632.93DUF1990 domain-containing protein n=1 Tax=Trebouxi... [more]
I0YZW6_COCSC2.470e-535.71DUF1990 domain-containing protein n=1 Tax=Coccomyx... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig798contigH-elongata_contig798:856..7150 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score303.1
Seed ortholog evalue1.3e-79
Seed eggNOG ortholog2880.D8LQ57
EggNOG free text desc.Domain of unknown function (DUF1990)
EggNOG OGs2E8GY@1,2SEZ2@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDomain of unknown function DUF1990
Ec32 orthologEc-26_006060.1
Exons4
Model size1043
Cds size828
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig798.15632.1prot_H-elongata_contig798.15632.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig798 868..6947 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931202.9014401-UTR-H-elongata_contig798:855..8671622931202.9014401-UTR-H-elongata_contig798:855..867Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig798 856..867 +
1691679739.8569183-UTR-H-elongata_contig798:855..8671691679739.8569183-UTR-H-elongata_contig798:855..867Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig798 856..867 +
1622931202.998367-UTR-H-elongata_contig798:6947..71501622931202.998367-UTR-H-elongata_contig798:6947..7150Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig798 6948..7150 +
1691679739.923803-UTR-H-elongata_contig798:6947..71501691679739.923803-UTR-H-elongata_contig798:6947..7150Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig798 6948..7150 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931202.9261909-CDS-H-elongata_contig798:867..10341622931202.9261909-CDS-H-elongata_contig798:867..1034Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig798 868..1034 +
1691679739.8751776-CDS-H-elongata_contig798:867..10341691679739.8751776-CDS-H-elongata_contig798:867..1034Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig798 868..1034 +
1622931202.9419205-CDS-H-elongata_contig798:5461..55911622931202.9419205-CDS-H-elongata_contig798:5461..5591Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig798 5462..5591 +
1691679739.8854008-CDS-H-elongata_contig798:5461..55911691679739.8854008-CDS-H-elongata_contig798:5461..5591Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig798 5462..5591 +
1622931202.960724-CDS-H-elongata_contig798:6007..63311622931202.960724-CDS-H-elongata_contig798:6007..6331Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig798 6008..6331 +
1691679739.8962853-CDS-H-elongata_contig798:6007..63311691679739.8962853-CDS-H-elongata_contig798:6007..6331Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig798 6008..6331 +
1622931202.9768624-CDS-H-elongata_contig798:6740..69471622931202.9768624-CDS-H-elongata_contig798:6740..6947Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig798 6741..6947 +
1691679739.9080424-CDS-H-elongata_contig798:6740..69471691679739.9080424-CDS-H-elongata_contig798:6740..6947Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig798 6741..6947 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig798.15632.1

>prot_H-elongata_contig798.15632.1 ID=prot_H-elongata_contig798.15632.1|Name=mRNA_H-elongata_contig798.15632.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=276bp
MREPSASFLERFLRHQDTERAKINHPYAGFTDPAARGSDVDSPPSLPPSF
QERTVRVRLGSGKIIYEQGKKALLLWRMHDGSSWARIKLGRRLEGQDSQP
NMVTVAKALGGLVWCVNPCRVLYEREDARFRFLAPPASEGEDYASRGWTK
YSDGVKAPGNGGEEQGWLWNGEAPLTAPPWARFSSGGDHMGKQTAVAYAT
GEGHLIEGEERMRVVWFGGRGGDDSVWFEVYSISRGAGCVGGILFPLVQS
MQRRFFREQAETIRRVVDESRDRAP*
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mRNA from alignment at H-elongata_contig798:856..7150+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig798.15632.1 ID=mRNA_H-elongata_contig798.15632.1|Name=mRNA_H-elongata_contig798.15632.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6295bp|location=Sequence derived from alignment at H-elongata_contig798:856..7150+ (Himanthalia elongata Himel1 dioecious)
AGGTTTGTCTTCATGCGGGAGCCATCGGCGTCCTTCTTGGAACGCTTCCT
GAGGCACCAAGACACCGAGAGGGCCAAAATCAATCACCCTTATGCGGGCT
TCACGGATCCAGCAGCTAGAGGTAGCGATGTTGATTCCCCTCCATCCCTG
CCGCCAAGCTTTCAGGAGCGGACAGTGAGGTGAAAGAACTGTGATGAGAT
AGTATGCTGTGATGTTATAACACAACGAGCGCTAATGCTTCCCACGACGA
AGAGGTTGTAACCTTGCCTTACATCCAAATCACTCCCTAGACTCGGGTTT
GGCGTCCCCATATGATGAAGAATCACATATGATGATTTTGAGCTTAGATG
TAGTTAAAATGTCCACATTCGAACCTGACGATAGTTGGTCCCCTGGACTA
CACCTCCTATGGTGCTAAGAAGGCGTGGATGTTCGAAAGGTTCGAATGAG
TTCATATGTTTCTTAATAATAATATTTGCTCCCCATAAAAAAAGAACAAG
AAAGTTACTAACTGTACCAACTACTATTATACTTTAATATTCTGGCAATA
ATCCGGGCCAACTTCTATCCCGTGTGGAATAATATCTGATCGTTAAGATC
GACAGCTTGAGGACTTGTGTAGTACGCGTGCAGTATTGACAGAAATTACA
TGGTAGCGTGGTAATATGTTGCGATATATAGCAGATAATATTACAGGAAC
CCGAAATGAACTGGGTCAGATGGGGTATGCCTTTTCAATGAGATGGAAAG
GAATACCCCGGTAGCCTAGCGTAGACATCCAATTGGAGACAAGGTAAACC
TATACAAGTATCTACTTCCTATTGGTCATACTGAACGTAATCTGACCGCA
TCTAAGAGTCTAACTTTATTAGCCCCCAGACAAGTGATCGGGTAGATAAG
CAGTGATGGCCCCCCTACCTCAAATTGAACCAGTAATATCTTCCCAGATT
TGTACGTATGCGAGGATATCTATACGATCCTCCTTCCGTAACCTGTTCAG
CTGAACACGAGCAGAAGACAACCAAATCCGGTTGATCTTACTCTGCTAAA
TTTGTGACCAATAACTCATCATACTCTACCTAAAACGTAGTTCCATGAAC
AATAATAGTCCCCCTTGATCTTACTGTAATCTCTTCGAAATCACATTCGA
AAGTCAATCAGAATCTACTACGTCGTTGATTATTTTTAATCTGAAAATCC
GGTCAATCGCGAACGCAATTTACAAACTACTATATCGCGCATCAATGACC
AGAAAAAATCGGCTTGTCGCGAGGTAGTCAAAATACCATAAATCTCATAA
CGCTGTGACACTCGCGAGCACTCGTACTCAAACAAGTCAGAAACGCTGAA
AAACGTCTCAGTCAACAATGAGTACTTCCAACAGCAATAATGTACCGCGG
TCCAATATTTACGGCCGACTGTAGAGACTCGTCAATAAATTTCTCGGGTA
GACCACGGTGATGATTTTCCCTCGTTCTCACGCAGTTCGCGATCTTGCTT
GATCAGGCTAAGCGTGCGCACATCCAGTTGTCGAACAAACTGATCGGAAT
CAATACACGGTGTCGCAAATACCGGGGCGACAGTGATAGGTTCGGGAGAA
GCACGGAAGTATTTGGTGCCAGTTTGTGTATTGCTGGCGGATATGAAATC
AATCGCGAACCCAGTAGATGGCTATGGGGCGCGCGTTGGGGTGCGCAGTT
GGTCCGGCTGTTGAAATGCTGCTAGATGCGCGTGAAAGCGCGGTTGAAGG
TGAGTTAACGGATGATGCAGTTGAAAGCGTGGACGCCACAGACACAGGGA
ATGTAACGTAAGACCACAATAAGCACATTCAAAGGCGCGGTGGTGGAAAG
GTAAAACTGGTAAAACGCCGGGCGACATTGGAAAATTGCGGTAACGGCGG
TAGCTATCCCAGGGGAAAACACCTGAGAAAACAGCAACTATAAGGAAGTA
AAAACGGAAGCGAGCAGCGGAGGAAATGCAATAAATCTAGCTGTGGAGCG
TGTATTTTCTCGAAAAGTCGCTATTCTAGCACTCTTGCAACATCCTTCAT
CAACCGGCCTGCAATTATCCTGATAGCTCTTTTCTAGCCGTTGTCCCTAC
CAGATCGTTCAACAACGAAGAAAATATATTCCTATCTAGTACCTATCGCG
GAGTCGCGGTTGACGGTGTACAAGCGTGGGGGGGTCAGGAAAAAGAGTGG
ATGAGGTGTCTTCTGGAAGACCTCAAAGTGTTCGGTATCAACGCCGACCA
GTGGACGATTGCAGCCCAGGACGAGGGGGAGTGGCGACGAGGGGGAGTGG
CGCAAGACGGCGGAACAAGGGGCGGAACATTTCATGAATTGGATCGCTAC
AGAGAAAGTCAGGACTGGACTACGGCATGCACTAGCNNNNNNNNNNGCAT
GTCCGAACATGACGGGAAGGACCAAAAAGAGGATAGCCCAATACAAGCGT
GCTCGTGCTGGTTTGCTCGCCATAGTTGATGAGCCACAAGTGGTGCGAAC
TTATCCTCCGGGCGGGTTTTGGCTTGCCGATGTCATATTGCCTTTCTGTT
ACTTTTTTTTCTTTGTCTTGTTTTGTTTTTGTTTTCGTGCTTTCGTGGGG
GGTTTTTTGCTTCCATTGAACCCATTACTTTTCGCTCAATCGTTCTACGA
TAGGCCCGCGTCCCGATAGCCACATGCAGTTCGTTAAGAATTTTGAGTGT
TCTCTTTTTTGTGTTTCTTTTTCTTTGAAGATGTCGCTTTTCCGAGTATT
TGTATCTTGCACCGTTATTGTCGTTTTCTTTTGTATTGGAGAGTACCTTC
AACGTTTTTCTCCTTCAGGATGGTGCTTTTTCTACCTTATGACCACGGGC
TGGATTTTGACATCAGCTTATGTGAGAATTCAATTAACCAATCAATCAAG
GTGAGAACCCAAAATCAGAGTCATCGAAGTCGTATAATATTCTTTCTCAC
TCCCTCACTCTCTCTATTATCTCTACCGGGTCGTTCAACAGCCCTCACTA
CTCTCTCTCATAAAATTGTCACAAGTCTCTTTCAGCTATCAGAAGAGTGT
ATTCTAGCACCTTCGAAGCTCTCCGGAAAATATGTGGCCAATAACAGGCT
TCAACACGCTCCGAAACTTGGGCAGGAAATCTCAACTGCAAAACCAAGGC
AATTCTCATTTAGAGATTATGTCCTCGTTTAGACACTCGAGGGAGGTCTG
TGACACGCTACGAGACTTAGGCAGGGAATACCATCTGCAATAATACCAAG
TAATTTCTCTCTCAGAGATTTTTACATTTAGACTCGAGCGGGGAAGACAC
TACAATAGCGAAAGGCATACAGTTGAGAGTATTGAAGTCCTGTAGAAAAT
ATTTCAAGATAACTTATTTATGAGAGAATACGAAGAGGAGGAGGGAAATA
CGATTTCACCCTTCGTGATGGGAGTTTCTAACTCGGTTGTTTATGGAAAC
AGCTCCACTAGTCTTCTGAAAGGTCGGGAATGCTAAACGCACGCAGCGTA
GGGGGAAGGAAAGCATGCATGGAACATGTATAGCTCGTGCATTAGGTCTC
TTATAAACACACTGCTGTAATGGAGAAAATAAAATACTCCGGCCTACGTA
TATATAATGAATTTATTTCGGTACTTTACGTTAAAATGCCATTTGTTGTC
TACTATATGGACCATCAAGGTCATAAGACGTTGGTACCACCAGCTCTCTA
CTACTTAGAGTCATCTAGGCCATACTCAATATTAAACAACTATATAAGAC
CGTAATACTTTAGTTTTACTACGAAACTCGACTTCGAAATAAACGAAACG
ATCTCACTTCGGAGTGGGGATGAACCAGCGTCAAACACAAGCTGCTTAAA
TCACCTCCCTTCTTCGGTAGGCACAGAGGTGCGAGTCTCTAGCTGGATGG
CCTTAGTCTTGGTCAGGGAGGACACATCTTGACGACGAAGTACGACGAAA
TATTCGGTAAACGCTTCTTGCCAAAACCCTAGCTTGACAGGCGTAAACTG
ACGATACGTCATGGAGAAAGTCTCCCATGATATATTGATCCACATATCTC
AACAAGGCTCTGCTAGCATGATCGTTAAGATCGACAGTTTTAGGGCCTGT
GTAGTACGCGTGCAGCGTTGAAAGGAATTGCACGGTAGTGCAGTGATATG
TGGCGATATGTATAGTAGATGATATGATATGAACCCGAAATGAACTGGGT
CAGGTGGGGCATGCCTTGTCCATGAGATGGAGAGGAATATCACGGTAGCC
CAGCGTGACATCCAACTGGGGACAAGGTAAACATATATATATTTCCTATT
GGTCATATTGAATGTAATATAACCGCATCTAAGAGTCTAACTTTATCAAT
ATCCACGAAGTATATTTATTTCGTAGCTACTGTACGAGACACCGTTCCTT
TGAAGAACTTGTGATACTTCAGACGCAAAGGTGAGAGTCGGATACGCCTG
CCGTTGTCGCTGCCGTTGTCGCTATCTATGTTGCGTCCGAGCTGTCGCTA
TCGCTGGCGCGTCCGAGCTGTGAGTAGCTGTTTCATTAGGCATCCTGCGC
GAGATCTCATGCCCGACGCTAGTGACCGCTTGCATGGTTTTGCCACGCGT
AGCCAGGGTTCGGCTTGGCAGCGGCAAGATTATTTATGAGCAAGGGAAGA
AAGCCCTGCTGCTGTGGAGAATGCATGATGGGTCATCTTGGGCGAGAATC
AAGCTTGGACGAAGACTCGAGGGACAAGACTCACAGGTAAATTCTCACTC
AATACACAGTCTATATGGTCGACACGACCGCCTTCAACCACCTTAAACGT
AAACGTGCTTGGCTAAACGGTACATCCAGCACTCGCGTGTTGCTAGCATA
GGAATCAAACTGGTTTACCGCGCCTGGCATTCTCACGTCGCGCCTCTTAC
TTTCCTCCATGTCCGGGGTAGATGCCCGCCATCCCGATGAGCCGTTCGTC
CGTGATTCGGAAGGTGGTTTCGCCGCCATAAAGTACTGAGCACAATGATA
ATATGTCGGGACCAACAGTTAGACTATACTCGGCGTTCGGCGTGCTTCGT
AGAGCGATATAGAACTCCCGACGCCGAACAAACCCTTCACAAGTCTGTTC
CCCTTCGGCCCTGGGCGCTCGCTTCCCCCCCCTCCTTAAATTGCTTTTGT
AGCCAAACATGGTCACGGTAGCCAAAGCCTTGGGGGGGCTCGTGTGGTGC
GTCAACCCGTGTAGGGTTCTCTACGAGCGGGAGGACGCTCGCTTCAGGTT
CCTCGCTCCACCTGCCTCTGAGGGCGAGGACTATGCCTCCCGTGGTTGGA
CTAAATATTCCGATGGAGTCAAAGCTCCCGGGAACGGCGGGGAGGAGCAG
GGGTGGTTGTGGAATGGCGAGGCTCCGTTGACTGCCCCCCCGTGGGCAAG
GTTTTCGTCGGGGGGTGATCATATGGGGAAGCAGACGGCCGTGGCGTACG
CGACGGGGGAGGGTCATCTGATTGAGGTGATTTTATTTCCCTATCTCGAC
GAGCGTGGCGATTGGAATGCGACTTTCCTTCATGTCCGTGTACTAGATCC
TCGAGCTGTTCCCCGTCGCAGCTGATGTCGGATATCGAGGGGATCGATCA
TTGCCTGAGTGTTTTTTTGCCGGGATGAAATGATCGTATGGTGCGGTTTA
CAGCAGGCGCAAGGTACTTCCTTCACAGACAGACTGATCCGGAGACCCAG
TGCGGTAGACAGAATCGCTCAACGTCTTCGGTGGTACTCAACTCTCACAT
AATCAAACGAAACACGGCTGTTTGTTCTTCTACTCCTTGCACACCTCGAG
CGCCTGATAGACCCAGACGCAGCTACGTATTGCTACCTGCTTCATCCATC
CCTCGTTGCCCTCGCTCTCGTCTCGTGAGCGACAGGGCGAAGAGCGTATG
CGGGTGGTTTGGTTCGGTGGACGAGGGGGCGATGACTCCGTCTGGTTCGA
GGTGTACTCTATTTCTAGAGGGGCCGGCTGCGTCGGAGGAATTTTGTTCC
CTCTTGTACAGTCAATGCAAAGAAGATTTTTCCGTGAGCAGGCGGAAACG
ATACGGCGTGTCGTGGACGAGTCCCGTGACCGTGCTCCTTAATCAGTAGG
ATGGAGCTGAACGGCAGAAATCGAAGGCATGTCTGTCACGTGACCTGGGG
TCACGAACCACCCTCACGAGTCTTTCTCGAAGAGGGGATCGCCGATATAC
GTGTGATGGAAGTTTCCAACACAACGTAAGGTGGCGAATCAGTAAAAAAA
AACCACAGAAGCACTTTACAAACATCGTGCTTGCCCGTAACGGAC
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Coding sequence (CDS) from alignment at H-elongata_contig798:856..7150+

>mRNA_H-elongata_contig798.15632.1 ID=mRNA_H-elongata_contig798.15632.1|Name=mRNA_H-elongata_contig798.15632.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1656bp|location=Sequence derived from alignment at H-elongata_contig798:856..7150+ (Himanthalia elongata Himel1 dioecious)
ATGCGGGAGCCATCGGCGTCCTTCTTGGAACGCTTCCTGAGGCACCAAGA
CACCGAGAGGGCCAAAATCAATCACCCTTATGCGGGCTTCACGGATCCAG
CAGCTAGAGGTAGCGATGTTGATTCCCCTCCATCCCTGCCGCCAAGCTTT
CAGGAGCGGACAGTGAGATGCGGGAGCCATCGGCGTCCTTCTTGGAACGC
TTCCTGAGGCACCAAGACACCGAGAGGGCCAAAATCAATCACCCTTATGC
GGGCTTCACGGATCCAGCAGCTAGAGGTAGCGATGTTGATTCCCCTCCAT
CCCTGCCGCCAAGCTTTCAGGAGCGGACAGTGAGGGTTCGGCTTGGCAGC
GGCAAGATTATTTATGAGCAAGGGAAGAAAGCCCTGCTGCTGTGGAGAAT
GCATGATGGGTCATCTTGGGCGAGAATCAAGCTTGGACGAAGACTCGAGG
GACAAGACTCACAGGGTTCGGCTTGGCAGCGGCAAGATTATTTATGAGCA
AGGGAAGAAAGCCCTGCTGCTGTGGAGAATGCATGATGGGTCATCTTGGG
CGAGAATCAAGCTTGGACGAAGACTCGAGGGACAAGACTCACAGCCAAAC
ATGGTCACGGTAGCCAAAGCCTTGGGGGGGCTCGTGTGGTGCGTCAACCC
GTGTAGGGTTCTCTACGAGCGGGAGGACGCTCGCTTCAGGTTCCTCGCTC
CACCTGCCTCTGAGGGCGAGGACTATGCCTCCCGTGGTTGGACTAAATAT
TCCGATGGAGTCAAAGCTCCCGGGAACGGCGGGGAGGAGCAGGGGTGGTT
GTGGAATGGCGAGGCTCCGTTGACTGCCCCCCCGTGGGCAAGGTTTTCGT
CGGGGGGTGATCATATGGGGAAGCAGACGGCCGTGGCGTACGCGACGGGG
GAGGGTCATCTGATTGAGCCAAACATGGTCACGGTAGCCAAAGCCTTGGG
GGGGCTCGTGTGGTGCGTCAACCCGTGTAGGGTTCTCTACGAGCGGGAGG
ACGCTCGCTTCAGGTTCCTCGCTCCACCTGCCTCTGAGGGCGAGGACTAT
GCCTCCCGTGGTTGGACTAAATATTCCGATGGAGTCAAAGCTCCCGGGAA
CGGCGGGGAGGAGCAGGGGTGGTTGTGGAATGGCGAGGCTCCGTTGACTG
CCCCCCCGTGGGCAAGGTTTTCGTCGGGGGGTGATCATATGGGGAAGCAG
ACGGCCGTGGCGTACGCGACGGGGGAGGGTCATCTGATTGAGGGCGAAGA
GCGTATGCGGGTGGTTTGGTTCGGTGGACGAGGGGGCGATGACTCCGTCT
GGTTCGAGGTGTACTCTATTTCTAGAGGGGCCGGCTGCGTCGGAGGAATT
TTGTTCCCTCTTGTACAGTCAATGCAAAGAAGATTTTTCCGTGAGCAGGC
GGAAACGATACGGCGTGTCGTGGACGAGTCCCGTGACCGTGCTCCTTAAG
GCGAAGAGCGTATGCGGGTGGTTTGGTTCGGTGGACGAGGGGGCGATGAC
TCCGTCTGGTTCGAGGTGTACTCTATTTCTAGAGGGGCCGGCTGCGTCGG
AGGAATTTTGTTCCCTCTTGTACAGTCAATGCAAAGAAGATTTTTCCGTG
AGCAGGCGGAAACGATACGGCGTGTCGTGGACGAGTCCCGTGACCGTGCT
CCTTAA
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