mRNA_H-elongata_contig79460.15602.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig79460.15602.1 vs. uniprot
Match: D8LDU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU4_ECTSI) HSP 1 Score: 264 bits (674), Expect = 2.560e-78 Identity = 139/212 (65.57%), Postives = 152/212 (71.70%), Query Frame = 1
Query: 382 SWGPVVTDRNYRRHVRKHQKTWN---YEEDKGRNGPKKGERTMEFGGSNDGGREVRGTVSG------------REAGAPLP-IPVILGVNADEGLMFVHGAFPMTMPKLVYYSFVTALFRTSVVRVLHAYGHLADQCEESGDYRRVMSQIMHDYLFRCPTLRAAQLLQEKNSYSAPVFVYQFSHPTEVPGFVECSGSSCHTAELPFVFNNVS 969
+WGPV+TDRNYRRHV KH+KTWN YEE+ R+ G LP +PV+LGVN+ EGLMFVHGAFP+TMPKLVYYSFVTALFRTSV+ VL AYGHLADQCEESGDYRRVMSQIMHDYLFRCP LRAAQLLQE+N APVFVY+FSHPTEVPGF ECSGSSCHTAELP+VFNN S
Sbjct: 236 TWGPVITDRNYRRHVGKHRKTWNCDTYEEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEGQALPPVPVMLGVNSHEGLMFVHGAFPVTMPKLVYYSFVTALFRTSVIGVLRAYGHLADQCEESGDYRRVMSQIMHDYLFRCPNLRAAQLLQEQNGRDAPVFVYEFSHPTEVPGFPECSGSSCHTAELPYVFNNTS 447
BLAST of mRNA_H-elongata_contig79460.15602.1 vs. uniprot
Match: A0A6H5KQP1_9PHAE (COesterase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP1_9PHAE) HSP 1 Score: 258 bits (658), Expect = 3.410e-76 Identity = 150/288 (52.08%), Postives = 169/288 (58.68%), Query Frame = 1
Query: 385 WGPVVTDRNYRRHVRKHQKTWN---YE---EDKGR--------NGPKKGERTMEFGGSNDG--------------------------------------------------------------------------GREVRGTVSGREAGAPLP-IPVILGVNADEGLMFVHGAFPMTMPKLVYYSFVTALFRTSVVRVLHAYGHLADQCEESGDYRRVMSQIMHDYLFRCPTLRAAQLLQEKNSYSAPVFVYQFSHPTEVPGFVECSGSSCHTAELPFVFNNVSLPEE 981
WGPV+TDRNYRRHV KH+KTWN YE E++ R NG K ++T S+DG GR + GR+ G LP +PV+LGVN+ EGLMFVHGAFP+TMPKLVYYSFVTALFRTSV+ VL AYGHLADQCEESGDYR VMSQIMHDYLFRCP LRAAQLLQE+N APVFVY+FSHPTEVPGF ECSGSSCHTAELP+VFNNV + +E
Sbjct: 12 WGPVITDRNYRRHVGKHRKTWNCDAYEDEAEERERQESRTVTLNGLGKSKKTKSTNASSDGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERPSMSRIGPAHNYTAPFMNVVQPLEALAAAAEHASAARAPGGRGMMNRGRGRDEGQALPPVPVMLGVNSHEGLMFVHGAFPVTMPKLVYYSFVTALFRTSVIGVLRAYGHLADQCEESGDYREVMSQIMHDYLFRCPNLRAAQLLQEQNGRDAPVFVYEFSHPTEVPGFPECSGSSCHTAELPYVFNNVEVIKE 299
BLAST of mRNA_H-elongata_contig79460.15602.1 vs. uniprot
Match: A0A835Z3F7_9STRA (Carboxylic ester hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3F7_9STRA) HSP 1 Score: 167 bits (424), Expect = 5.580e-44 Identity = 92/213 (43.19%), Postives = 118/213 (55.40%), Query Frame = 1
Query: 382 SWGPVVTDRNYRRHVRKHQKTWNYEEDKGRNGPKKGERTMEFGGSNDGGREVRGTVSGREAGAPLP------------IPVILGVNADEGLMFVHGAFPMTMPKLVYYSFVTALFRTSVVRVLHAYGHLADQCEESGDYRRVMSQIMHDYLFRCPTLRAAQLLQEKNSYSA------PVFVYQFSHPTEVPGFVECSGSSCHTAELPFVFNNV 966
+WGPV+TD +R +R++ +T V+G V PL +PV++G N+ EG MFV+ AFP+ MPK VY+ FV ALF+ S +VL YG +A Q SGDYR VMSQI+HDYLFRCP R A LLQ++ S PVFVY+FSHPT VPGF C+G +CHTAELP+VF +
Sbjct: 282 TWGPVMTDSIHRNLLRRYSRT------------------------------VQGAVPLMNVTQPLTMWGAATGGTMAEVPVLMGANSHEGQMFVYAAFPVNMPKYVYWGFVLALFKDSAPKVLQQYGEMARQYRGSGDYRPVMSQIIHDYLFRCPLRRTAHLLQDRRDRSENPAGTPPVFVYEFSHPTTVPGFAACNGLACHTAELPYVFEQL 464
BLAST of mRNA_H-elongata_contig79460.15602.1 vs. uniprot
Match: A0A4D9D607_9STRA (COesterase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D607_9STRA) HSP 1 Score: 150 bits (379), Expect = 5.520e-37 Identity = 74/138 (53.62%), Postives = 96/138 (69.57%), Query Frame = 1
Query: 580 IPVILGVNADEGLMFVHGAFPMTMPKLVYYSFVTALFRTSVVRVLHAYGHLAD-----QCEESGDYRRVMSQIMHDYLFRCPTLRAAQLLQEKN--SYSAPVFVYQFSHPTEVPGFVECSGSSCHTAELPFVFNNVSL 972
+PVILG DEG MFV+ FP MPK +Y+ FV LFR S +++ Y + + Q + DYR V+S I++DY+FRCPT RAA LLQE++ +APV+V+QFSHPT VPGF EC G SCHT+ELPFVFNN+ +
Sbjct: 387 VPVILGSCKDEGQMFVYNIFPFPMPKYLYWGFVFVLFRESAPKIIRHYAEVVEKEVARQGAKRIDYRPVLSIILNDYMFRCPTWRAAHLLQERSVDPAAAPVYVFQFSHPTRVPGFPECHGLSCHTSELPFVFNNLDV 524
BLAST of mRNA_H-elongata_contig79460.15602.1 vs. uniprot
Match: A0A7S4DLF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DLF7_HETAK) HSP 1 Score: 134 bits (338), Expect = 6.640e-34 Identity = 67/137 (48.91%), Postives = 87/137 (63.50%), Query Frame = 1
Query: 580 IPVILGVNADEGLMFVHGAFPMTMPKLVYYSFVTALFRTSVVRVLHAYGHLADQCEESGDYRRVMSQIMHDYLFRCPTLRAAQLLQEKNSYS--APVFVYQFSHPTEVPGFVECSGSSCHTAELPFVFNNVSLPEED 984
+PV+LG N EG MFV+ + M + Y S V LF+TS RVL Y HLAD C + D+R +S I++DY+FRCPT RAA L +S APV+VY+F+ PT + F EC G +CHTAELPFVF V + E+
Sbjct: 12 VPVLLGTNRHEGEMFVYSVWGGRMGLIAYRSLVNLLFKTSAPRVLRTYKHLADPCRVTNDFRPALSAILNDYMFRCPTWRAANALYAVSSGRGRAPVYVYEFALPTRLQDFPECYGKACHTAELPFVFGQVDVIHEN 148
BLAST of mRNA_H-elongata_contig79460.15602.1 vs. uniprot
Match: A0A6U9X0T4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9X0T4_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 3.120e-19 Identity = 75/256 (29.30%), Postives = 94/256 (36.72%), Query Frame = 1
Query: 571 PLPIPVILGVNADEGLMFVHGAFPMTMPKLVYYSFVTALFRTSVVRVLHAYGHLADQCEESG-------------------------------------------------------------------------------------------------------DYRRVMSQIMHDYLFRCPTLRAAQLLQ----EKNSYSAP-----------VFVYQFSHPTEVPGFVECSGSSCHTAELPFVFNNVSLPEED 984
P IP+I+G N EG +FVHGAFP+TM K VY+ FV ALF+ S RVL Y Q E DYR VMS+I++DYLFRCP+ A LL +K+ Y V+VY+FS PT VPG+ EC G SCHTAELP+VF ++ + D
Sbjct: 620 PDDIPIIIGTNKHEGEIFVHGAFPLTMSKAVYWMFVGALFKDSAPRVLKHYRPYIAQLEADAAILVEKQVAEEEDKQYWMENQEELENEYRELLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTVFSPKDPAAVESRRQQRLDNLKKKAKEKALKKAAKVSIDYRPVMSRIINDYLFRCPSWHYAHLLSLQRVKKSKYRRKKGVRRRDNLNNVYVYRFSQPTHVPGYKECWGKSCHTAELPYVFESMDIIRSD 875
BLAST of mRNA_H-elongata_contig79460.15602.1 vs. uniprot
Match: A0A448ZKD1_9STRA (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKD1_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 3.220e-19 Identity = 75/254 (29.53%), Postives = 95/254 (37.40%), Query Frame = 1
Query: 571 PLPIPVILGVNADEGLMFVHGAFPMTMPKLVYYSFVTALFRTSVVRVLHAYGHLADQCEESG------------------------------------------------------------------------------------------------------DYRRVMSQIMHDYLFRCPTLRAAQLLQ----EKNS----------YSAPVFVYQFSHPTEVPGFVECSGSSCHTAELPFVFNNVSLPEED 984
P IP+I+G N EG +FVHGAFP+TM K VY+ FV ALF+ S RVL Y Q E DYR VMS+I++DYLFRCP+ A LL +K+S + V+VY+FS PT VPG+ EC G SCHTAELP+VF ++ + D
Sbjct: 824 PDDIPIIIGTNKHEGEIFVHGAFPLTMSKAVYWMFVGALFKDSAPRVLKHYRPYVAQLEADAAVLVEKQVSEEEHKQYWMENKEELENEYLELLKTTAATRGGGQSNGNRNETHGETETASSWWQKVFSPRDPEEIESRRRQRLEILKKKAKEKALKKAAKVSIDYRPVMSRIINDYLFRCPSWHYAHLLSLQRVKKSSTRRKKGGHRDHRNNVYVYRFSQPTHVPGYKECWGKSCHTAELPYVFESMDIIRSD 1077
BLAST of mRNA_H-elongata_contig79460.15602.1 vs. uniprot
Match: A0A1E7EYD9_9STRA (Putative carboxylesterase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EYD9_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.080e-19 Identity = 73/253 (28.85%), Postives = 91/253 (35.97%), Query Frame = 1
Query: 571 PLPIPVILGVNADEGLMFVHGAFPMTMPKLVYYSFVTALFRTSVVRVLHAYGHLADQCEESG----------------------------------------------------------------------------------------------------------------DYRRVMSQIMHDYLFRCPTLRAAQLLQEKNSYSAP---VFVYQFSHPTEVPGFVECSGSSCHTAELPFVFNNVSLPEED 984
P IP+I+G N EG +FVHGAFP+TM K VY+ FV ALF+ S RVL Y Q E DYR VMS+I+ DYLFRCP+ A L +N+ V+VY+FS PT +PGF EC G SCHTAELP+VF ++ + D
Sbjct: 455 PDHIPIIIGTNKHEGELFVHGAFPLTMSKTVYWMFVGALFKDSAPRVLKHYRPYVAQLEADAAALAEKQVSEEMKKQYFLENQQELEEEYRTLLHTSTTTRGGSTSGENVTENKSQKEDTEKEGNGDEDFKRWWHAFTPSADPEQVKSRQQQRLDNMKRKAKERALREAAKISLDYRPVMSRIITDYLFRCPSWMYAHQLNNRNNNQDNRNNVYVYRFSQPTHIPGFPECWGKSCHTAELPYVFESMDIIRSD 707
BLAST of mRNA_H-elongata_contig79460.15602.1 vs. uniprot
Match: A0A1Z5KR26_FISSO (Cholinesterase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KR26_FISSO) HSP 1 Score: 97.8 bits (242), Expect = 9.450e-19 Identity = 71/253 (28.06%), Postives = 88/253 (34.78%), Query Frame = 1
Query: 571 PLPIPVILGVNADEGLMFVHGAFPMTMPKLVYYSFVTALFRTSVVRVLHAYGHLADQCEESG--------------------------------------------------------------------------------------------------------------------DYRRVMSQIMHDYLFRCPTLRAAQLLQE---KNSYSAPVFVYQFSHPTEVPGFVECSGSSCHTAELPFVFNNVSL 972
P IP+I+G N EG MFVHGAFP+TM K VY+ FV ALFR S RVL Y DQ E DYR VMS+I+ DYLFRCP A + + + + V+VYQFSH T +PGF EC G +CHTAE+P+ F + +
Sbjct: 366 PDDIPIIIGANKHEGEMFVHGAFPITMSKAVYWMFVGALFRDSASRVLRHYRGYVDQIEREAQELARLQIEEEENRQYYLENREQLEKEYQMLLDMNVSSTDDVTDRPGIEEFVATWSRGGSIVSDLGNSSRTFFSRLWPFPSNSTSLSDEERSRIRDERRKVRAKEKALREAAKVVVDYRPVMSRIIDDYLFRCPAWHFAHKVSQIRLRKGHPNNVYVYQFSHSTHIPGFKECWGKACHTAEIPYAFEAMDI 618
BLAST of mRNA_H-elongata_contig79460.15602.1 vs. uniprot
Match: A0A7S2JQG2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JQG2_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 2.700e-17 Identity = 43/81 (53.09%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 730 LADQCEESGDYRRVMSQIMHDYLFRCPTLRAAQLLQEKNSYSAPVFVYQFSHPTEVPGFVECSGSSCHTAELPFVFNNVSL 972
L + + + DYR VMSQI+ DYLFRCP+L A +L KN V+VY+FS PT +PG+ EC G SCHTAELP+VF + +
Sbjct: 24 LKEAAKVAVDYRPVMSQIIDDYLFRCPSLHFADILPSKN-----VYVYRFSQPTHIPGYKECWGKSCHTAELPYVFEAMDV 99 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79460.15602.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig79460.15602.1 >prot_H-elongata_contig79460.15602.1 ID=prot_H-elongata_contig79460.15602.1|Name=mRNA_H-elongata_contig79460.15602.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=329bp SEGDEERPGLLRPGLSPSRACVRGVEGSGVADGRTKERGRLLQASDMKMRback to top mRNA from alignment at H-elongata_contig79460:418..2563+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig79460.15602.1 ID=mRNA_H-elongata_contig79460.15602.1|Name=mRNA_H-elongata_contig79460.15602.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2146bp|location=Sequence derived from alignment at H-elongata_contig79460:418..2563+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig79460:418..2563+ >mRNA_H-elongata_contig79460.15602.1 ID=mRNA_H-elongata_contig79460.15602.1|Name=mRNA_H-elongata_contig79460.15602.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1974bp|location=Sequence derived from alignment at H-elongata_contig79460:418..2563+ (Himanthalia elongata Himel1 dioecious)back to top |