mRNA_H-elongata_contig79308.15590.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: A0A834FW95_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FW95_RHOSS) HSP 1 Score: 286 bits (732), Expect = 1.980e-90 Identity = 154/330 (46.67%), Postives = 217/330 (65.76%), Query Frame = 1
Query: 16 AFKLRTTQRAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTIE-VTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQLE 1002
AF RT R+ + A+ + K+T + +K ++ H LKP LSD KI RL + MFK + N V++DEKWFYM K+ +RYYV E P R + K +TKVMFL AVARPR + +FSGK+GI+PFT + A+R+S+NR+AGT+ TK + VTK+ + L+EKVIP I+S++ + S G + +++QQDNARPH ND E +A + +G+DIRL NQPANS D N+LDLGFFN+IQSLQ + PR++D+LV AV+++ + P L+ V+LSLQAC+ ++M G N+YKLPH++K +L G LP+QLE
Sbjct: 102 AFHRRTNIRSFSEALEVPKSTLHQRIKEGEIRPHTNPLKPNLSDQNKIARLHFCLSMLEPNSLQTQPMFKAMYNYVHIDEKWFYMTKESERYYVLPDEDQPHRTCKSKRFITKVMFLAAVARPRFGANGCEEFSGKIGIFPFTVKEPAKRTSKNRLAGTMETKAVAAVTKDVIRSYLIEKVIPAIQSKWHQSSVGET-----IYIQQDNARPHIKPNDVEFHEAATRNGFDIRLTNQPANSPDLNVLDLGFFNAIQSLQHQEAPRTIDQLVNAVEKSFDKLPSRELDSVFLSLQACMVEVMKVNGGNNYKLPHIKKPQLRRDGVLPFQLE 426
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: UPI001CB9A663 (uncharacterized protein LOC122597563 n=3 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9A663) HSP 1 Score: 276 bits (707), Expect = 4.050e-87 Identity = 153/322 (47.52%), Postives = 207/322 (64.29%), Query Frame = 1
Query: 40 RAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTI-EVTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQLE 1002
R+ A A+ +SK+T R +K ++ H +KP L+D K RL + T S F + NV+++DEKWFYM K +RYY+ E P R + K +TKVMFL AVARPR + S N FSGK+GI+PFT A+RSS+NRVAGTL+TK I VTKE + L+EKV+P I+S++PR G +++QQDNA+PH ND E + S DG+DIRL QP NS D N+LDLGFF +IQSLQ++ S+DELV+AVK + +R P LN V+L+LQ C+++IM G N+Y+ PH+ KG+LE G LP +E
Sbjct: 81 RSIAKAIDVSKSTMHRRIKEGALRPHTNAIKPDLTDDNKKARLEFCLSTVT-----RSLTFHDIFNVIHIDEKWFYMSKPSKRYYLVPNEIEPLRTCKSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRSSKNRVAGTLITKPILSVTKEVTRSWLIEKVLPAIRSKWPRDHTGP------IFIQQDNAKPHIDVNDAEFNQEASKDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEVLGSIDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQGKLPLTIE 391
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3) HSP 1 Score: 270 bits (691), Expect = 2.130e-84 Identity = 146/315 (46.35%), Postives = 204/315 (64.76%), Query Frame = 1
Query: 58 VGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTI-EVTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQL 999
+ +SK+T R +K ++ H +KP L+ K RL + + ++ F + NV+++DEKWFYM K +RYY+ GE P R Q K +TKVMFL AVARPR + S N FSGK+GIYPFT+ A+RSS+NRVAGTL TK I VTKE + L+EKV+PDI++++PR G +++QQDNA+PH ND E +A S DG+DIRL QP+NS D N+LDLGFF +IQSLQ++ ++DELV AV+ A ++ LN V+L+LQ C+ +I+ G N+Y++PH+ K RLE G LP ++
Sbjct: 110 LNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKISRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPRSHVGP------IFIQQDNAKPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREGNLPLRI 418
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1) HSP 1 Score: 268 bits (684), Expect = 2.850e-84 Identity = 148/325 (45.54%), Postives = 209/325 (64.31%), Query Frame = 1
Query: 28 RTTQRAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTIE-VTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQL 999
R+T R+ A A+ +SKTT R ++ ++ H +KP L++ K RL + + + ++ +F + NVV++DEKWFYMCK +YY+ E P+R+V+ K +TK MFL AVARPR + FSGK+GI+PFT A+R+S+NRVAGT+VTK E +TKE K L+EKVIP I +++P+ R + +QQDNA+PH N+ E +A S DG+DIRL+ QP NS D N+LDLGFF SIQ LQ P +++ELV AVK++ P LN V+L+ Q C+++IM G+NDYK+PH+ K RLE G LP Q+
Sbjct: 36 RSTVRSLAKAISVSKTTVHRRVQEGLIRPHTNAVKPTLTEDNKRTRLEFC----LSQIDPDTLLFSDMFNVVHIDEKWFYMCKTTTKYYLVHDEPEPTRRVKSKRFITKAMFLAAVARPR------NGFSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQ-------GMRTIIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLPLQI 343
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: UPI001CB8D7AC (uncharacterized protein LOC122583467 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8D7AC) HSP 1 Score: 272 bits (695), Expect = 5.630e-83 Identity = 155/326 (47.55%), Postives = 206/326 (63.19%), Query Frame = 1
Query: 28 RTTQRAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTI-EVTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQLE 1002
RT R+ A A+ +SK+T R +K ++ H +KP L+D K RL + T S F + NV+++DEKWFYM K +RYY+ E P R + K +TKVMFL AVARPR + S N FSGK+GI+PFT A+RSS+NRVAGTL+TK I VTKE + L EKV+P I+S++PR G +++QQDNA+PH ND E + S DG+DIRL QP NS D N+LDLGFF IQSLQ++ S DELV+AVK + +R P LN V+L+LQ C+++IM G N+Y+ PH+ KG+LE G LP +E
Sbjct: 280 RTNIRSIAKAIDVSKSTMHRRIKEGALRPHTNAIKPDLTDDNKKARLEFCLSTVT-----RSLTFHDMFNVIHIDEKWFYMSKPSKRYYLVPNEIEPLRTCKSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRSSKNRVAGTLITKPILSVTKEVTRSWLNEKVLPAIRSKWPRDHTGP------IFIQQDNAKPHIDVNDAEFNEEASKDGFDIRLCFQPPNSPDLNVLDLGFFRVIQSLQEQEVLGSNDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQGKLPLTIE 594
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: UPI000B8F2756 (uncharacterized protein LOC110913170 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F2756) HSP 1 Score: 265 bits (677), Expect = 2.470e-82 Identity = 150/334 (44.91%), Postives = 212/334 (63.47%), Query Frame = 1
Query: 4 MANTAFKLRTTQRAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTI-EVTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQLE 1002
+A A + RT R+ A A+ +SK+T R +K ++ H +KP L++ K ERL + T ++ S F + NVV++DEKWFYM K + YY+ GE P RK + K +TKVMFL AVARPR + N FSGK+GI+PFT+ A+RSS+NRVAGT+ TK I VTKE + L++KV+P I+ ++P+ G +++QQDNA+PH +D + + S G+DIRL QP NS D N+LDLGFF +IQSLQ++ S+DELV AV+ + + LN V+L+LQ C+++IM G N+Y+ PH+ KGRLE G LP Q+E
Sbjct: 91 VAQIALRRRTNIRSIAKALNVSKSTVHRRIKEGELRPHTNAIKPNLTEENKKERLEFCLSMITPSLSNPS--FYDMFNVVHIDEKWFYMSKPSKSYYLVPGEDEPLRKCKSKKFITKVMFLAAVARPRFDTLGNEIFSGKIGIFPFTKLEPAKRSSKNRVAGTMETKPILSVTKEVTRSWLIDKVLPAIRDKWPQGHTGP------IFIQQDNAKPHISIDDEQFVQEASRGGFDIRLRFQPPNSPDLNVLDLGFFRAIQSLQEQEVLGSIDELVHAVQTSFHKMSSRELNNVFLTLQTCMKEIMKVHGSNNYQTPHISKGRLERQGRLPLQIE 416
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: A0A1R3KIH7_9ROSI (Transposase, Tc1-like protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3KIH7_9ROSI) HSP 1 Score: 264 bits (675), Expect = 5.830e-82 Identity = 139/312 (44.55%), Postives = 203/312 (65.06%), Query Frame = 1
Query: 70 KTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRM-FKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTIEVTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQLE 1002
K+T R +K ++AH+ +KP L+D K RL + AG + + F G+ N V++DEKWF+M ++ +RYY+ E P R + K +TKVMFL AVARPR + S N FSGK+GI+PF + A+R S+NR+AGT+ TK + VTK+ + ++EK++P IKS++P + V++QQDNA+PH D E KA S+DG+DI++ QP NS D N+LDLGFF +IQSLQ + PR++DEL+ AV+++ P LN V+L+LQ C+ ++M GG N+YK+PH+ K +L+N G LP LE
Sbjct: 119 KSTIHRRVKEGFIRAHSNAVKPDLTDENKKTRLEFCLSKLDLTNAGINTIPFDGMFNQVHIDEKWFFMTRESERYYLLPEEDEPVRTCKSKRFITKVMFLAAVARPRFDESGNVKFSGKIGIFPFVHKEPAKRKSKNRIAGTMETKPMLVTKDVTRAYMIEKILPAIKSKWPD-------KMETVYIQQDNAKPHINPKDVEFLKAASSDGFDIQISCQPPNSPDLNVLDLGFFRAIQSLQHQEAPRTIDELINAVEKSFNEFPENSLNNVFLTLQNCMIEVMKVGGGNNYKVPHMGKDKLQNQGNLPTTLE 423
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: UPI001C25E3EC (uncharacterized protein LOC121760632 n=15 Tax=Salvia splendens TaxID=180675 RepID=UPI001C25E3EC) HSP 1 Score: 263 bits (672), Expect = 4.450e-81 Identity = 139/326 (42.64%), Postives = 204/326 (62.58%), Query Frame = 1
Query: 28 RTTQRAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTIE-VTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQLE 1002
R+T R A+ + +SKTT R +K +K H +KP L++ KI R++W +A ++ + N+V++DEKWFYM K RYY+ E P R + K +TKVMF+ AV+RP C + F GK+G++PFT+Q+ AQRSS+NR GT+ TK I+ +TKE L+ ++IP IK+++P A AS +K+++QQDNA+PH D + S DG++ L++QP NS DTN+LDLG+F +IQSLQD SVD+L+ V + + P LN V+++LQ+CL I+ G+NDYK+PH+ K RLE LP QL+
Sbjct: 119 RSTIRKVASKMEVSKTTIGRFLKRNQLKPHTSAIKPTLTETNKIARIKWCLSHIQPTLAEGKLLYHSMHNIVHIDEKWFYMTKTSDRYYLLPDEDVPYRSCKSKRFITKVMFMAAVSRPLCGPDGDIIFDGKIGLFPFTEQIPAQRSSKNRPKGTMETKPIQSITKEVMTACLINQIIPSIKAKWP---ANAS---KKIFIQQDNAKPHLRAADHQFEALASTDGFEFHLISQPPNSPDTNVLDLGYFRAIQSLQDDKMATSVDDLLRNVFNSFEELSPQTLNRVFITLQSCLTAILQVHGKNDYKIPHMNKNRLERTEGLPLQLQ 438
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: UPI001CB94040 (uncharacterized protein LOC122597462 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB94040) HSP 1 Score: 258 bits (658), Expect = 5.670e-81 Identity = 143/307 (46.58%), Postives = 195/307 (63.52%), Query Frame = 1
Query: 85 RNMKALGVKAHARFLKPFLSDAQKIERLRWARGWTTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTI-EVTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQLE 1002
R +K ++ H +KP L+D K RL + T +S F + NV+++DEKWFYM K + YY+ E P R + K +TKVMFL AVARPR + S N FSGK+GI+PFT A+R S+NRVAGTL+TK I VTKE + L+EKV+P I+S++PR G +++QQ+NA+PH ND E + S DG+DIRL QP NS D N+LDLGFF +IQSL+ + S+DELV+AVK + +R P LN V+L+LQ C+++IM G N+Y+ PH+ KG+LE G LP +E
Sbjct: 3 RRIKEGALRPHTNAIKPDLTDDNKKARLEFCLSTVT-----QSLTFHDMFNVIHIDEKWFYMSKPSKCYYLVPNEIEPLRTCKLKKFITKVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRLSKNRVAGTLITKPILSVTKEVTRSWLIEKVLPAIRSKWPRDHTGP------IFIQQENAKPHIDVNDAEFNQEASKDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLKKQEVLGSIDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQGKLPLTIE 298
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Match: A0A452XZT7_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452XZT7_AEGTS) HSP 1 Score: 259 bits (661), Expect = 7.770e-81 Identity = 142/327 (43.43%), Postives = 205/327 (62.69%), Query Frame = 1
Query: 28 RTTQRAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQKIERLRWARGW---TTTPVAGESRMFKGVGNVVYVDEKWFYMCKDKQRYYVFEGEHPPSRKVQHKSHVTKVMFLGAVARPRCNHSTNSDFSGKVGIYPFTQQVRAQRSSRNRVAGTLVTKTIEVTKESYKKMLLEKVIPDIKSQFPRPSAGASPEARKVWVQQDNARPHFVNNDPEIRKAISADGWDIRLVNQPANSSDTNILDLGFFNSIQSLQDRTTPRSVDELVTAVKEA*KRDPPAVLNLVWLSLQACLEQIMLAGGENDYKLPHVRKGRLENAGALPWQL 999
R+T R+ A + S TT R +K H LKP L + K +R+++ TTT E FK + N++++D+KWFYM K K+ YY+ GE P+R +Q+ S + KVMFL AVARPR ++ N FSGK+GI+PF ++V AQR S NR GTL TK+I+V ++ ++ ++E ++P I++ +P AG + +++QQDNA+PH + NDPE A+ G DIRL+ QP NS D N L+LGFFNS+QSL D +PR++ +L+ V + + LN V+LSLQAC+ +I+ G N YK+PH K RLEN G LP +L
Sbjct: 19 RSTIRSLAWQLQCSPTTLHRKFMLKLIKRHTNSLKPVLEEKNKKDRMKYCLSMLHETTTQT--ERPKFKTMHNIIHIDKKWFYMTKKKRNYYLLYGEEEPTRTLQNGSCIGKVMFLTAVARPRWDNEGNVTFSGKIGIWPFVKEVSAQRRSDNRPRGTLETKSIKVNRQVMREFMIENLLPAIQASWPENDAGQT-----IYIQQDNAKPHILPNDPEFVAAVERTGLDIRLIQQPVNSPDLNGLELGFFNSLQSLTDCLSPRTLQDLIKGVLDEFENYEVYKLNRVFLSLQACMIEILNHAGGNGYKIPHANKERLENLGMLPPRL 338 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79308.15590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig79308.15590.1 >prot_H-elongata_contig79308.15590.1 ID=prot_H-elongata_contig79308.15590.1|Name=mRNA_H-elongata_contig79308.15590.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=281bp MANTAFKLRTTQRAAAAAVGLSKTTFRRNMKALGVKAHARFLKPFLSDAQback to top mRNA from alignment at H-elongata_contig79308:720..1721+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig79308.15590.1 ID=mRNA_H-elongata_contig79308.15590.1|Name=mRNA_H-elongata_contig79308.15590.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1002bp|location=Sequence derived from alignment at H-elongata_contig79308:720..1721+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig79308:720..1721+ >mRNA_H-elongata_contig79308.15590.1 ID=mRNA_H-elongata_contig79308.15590.1|Name=mRNA_H-elongata_contig79308.15590.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1686bp|location=Sequence derived from alignment at H-elongata_contig79308:720..1721+ (Himanthalia elongata Himel1 dioecious)back to top |