mRNA_H-elongata_contig79185.15578.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A6H5KDB2_9PHAE (PAPS_reduct domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDB2_9PHAE) HSP 1 Score: 441 bits (1133), Expect = 1.050e-154 Identity = 201/234 (85.90%), Postives = 220/234 (94.02%), Query Frame = 1
Query: 4 IFEKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 705
+FE+ R+ LE QL +SL V KKNP+FTTALIAGDCVILDAIAKAGLLDKIKVVF+DT+FLFPES+DF+HEVE+HYGFKA +Y CADC T+++FYDKYGEDYWMEDID+YDKKCKVEPLMR+LKE++TEAWINGRRRDHGFERAALP+WEG KFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHSK
Sbjct: 80 LFEEVRMSNLESQLADSLAKVVAEKKNPIFTTALIAGDCVILDAIAKAGLLDKIKVVFVDTYFLFPESLDFLHEVEEHYGFKASIYHCADCETQQDFYDKYGEDYWMEDIDQYDKKCKVEPLMRALKEAETEAWINGRRRDHGFERAALPVWEGTKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 313
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A835YS08_9STRA (Phosphoadenylyl-sulfate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS08_9STRA) HSP 1 Score: 405 bits (1040), Expect = 1.230e-140 Identity = 187/231 (80.95%), Postives = 211/231 (91.34%), Query Frame = 1
Query: 10 EKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
E +RI +LE+ L E+LK V+++K+ PVFTTALIAGDCVILDAIAKAGLLDKI V+FIDTFFLFPES++FI E+E HYGFKAK Y AD AT+EEFY+KYGEDYWMEDID+YD KCKVEPL R+L+E++T+AWINGRRRDHG ERAALP+WEG K NPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLE WF+YGGERSGRFEG+KNKDGS KTECGIH+
Sbjct: 73 EASRIAYLEQSLAETLKKVSQVKERPVFTTALIAGDCVILDAIAKAGLLDKIDVIFIDTFFLFPESLEFIEELEQHYGFKAKRYHAADVATQEEFYEKYGEDYWMEDIDQYDLKCKVEPLQRALRETNTDAWINGRRRDHGAERAALPVWEGTKVNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLEKWFTYGGERSGRFEGLKNKDGSLKTECGIHT 303
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A835Z3Q9_9STRA (Phosphoadenylyl-sulfate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Q9_9STRA) HSP 1 Score: 400 bits (1029), Expect = 6.450e-139 Identity = 180/231 (77.92%), Postives = 209/231 (90.48%), Query Frame = 1
Query: 10 EKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
E+ RI +LE+ + SLK + E+K P+FTTALIAGDCVILDA+AKA LLD++ VVFIDT+FLFPES++F+ E+E HYGFKAKVY ADCAT+EEFY+KYGEDYWMEDID+YD KCKVEPL R+L+E++T+AWINGRRRDHGFERAALP+WEG K NPLAFW+FEDCWTYLRKH VPYHPLHDVGFSSLGDMQSTRKVPL+ WF+YGGERSGRFEG+KNKDGS KTECGIH+
Sbjct: 76 EEARIQYLEDSMMASLKKMMEVKTKPMFTTALIAGDCVILDALAKAQLLDRVDVVFIDTYFLFPESLEFLRELEAHYGFKAKVYHAADCATQEEFYEKYGEDYWMEDIDQYDLKCKVEPLQRALREAETDAWINGRRRDHGFERAALPVWEGNKVNPLAFWTFEDCWTYLRKHKVPYHPLHDVGFSSLGDMQSTRKVPLDKWFTYGGERSGRFEGLKNKDGSNKTECGIHT 306
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A4D9D472_9STRA (PAPS_reduct domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D472_9STRA) HSP 1 Score: 395 bits (1016), Expect = 5.520e-137 Identity = 179/232 (77.16%), Postives = 203/232 (87.50%), Query Frame = 1
Query: 10 EKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHSK 705
E+ ++FLE QL LK E+KK P+FTTALIAGDCV+LD IAKAGLLDKI++VFIDTFFLFPE++DF+ EVE+HYGFKAKVY CADC T+E FYDKYG DYWMEDID+YD KCKVEPL R+LKES T+AWINGRRRDHG ERA+LP+WEG K NP+AFW+FEDCW YLRKHNVPYHPLHDVGFSSLGDMQST KVPLE W +Y GERSGRF+G+ NKDGS KTECGIH+K
Sbjct: 76 EQQTLEFLEGQLSSVLKKAVEIKKKPLFTTALIAGDCVLLDGIAKAGLLDKIEIVFIDTFFLFPETLDFLREVEEHYGFKAKVYHCADCPTQESFYDKYGADYWMEDIDQYDFKCKVEPLQRALKESGTDAWINGRRRDHGAERASLPVWEGDKVNPIAFWTFEDCWNYLRKHNVPYHPLHDVGFSSLGDMQSTAKVPLEKWMTYAGERSGRFQGLTNKDGSAKTECGIHTK 307
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A7S3XUP3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUP3_HETAK) HSP 1 Score: 377 bits (968), Expect = 1.870e-129 Identity = 168/231 (72.73%), Postives = 201/231 (87.01%), Query Frame = 1
Query: 10 EKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
E T++DFL QL E+LK EMKK P+FTTA IAGDCV+LDAI KAGL+DK++++FIDT+ LFPESI F+ E+E+HYGFKAKVY DC T+E +Y+KYGEDYWMEDID YD KCKVEPL R+L+E D++ WINGRRRDHG ERAALP+WEG K NPLAFW+FEDCW+YLRK++VPYHPLHDVGFSS+GD+QSTRKV + WF+YGGERSGRFEG+KNKDGS KTECG+H+
Sbjct: 87 ENTKLDFLTAQLTETLKKAVEMKKRPIFTTAEIAGDCVLLDAIHKAGLIDKVEIIFIDTYHLFPESIAFLKEIEEHYGFKAKVYHAEDCETQEIYYEKYGEDYWMEDIDAYDMKCKVEPLQRALREHDSDCWINGRRRDHGAERAALPVWEGTKLNPLAFWTFEDCWSYLRKYDVPYHPLHDVGFSSMGDVQSTRKVDHKVWFTYGGERSGRFEGLKNKDGSAKTECGLHT 317
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A6U2BYW2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2BYW2_HEMAN) HSP 1 Score: 321 bits (822), Expect = 2.870e-107 Identity = 149/231 (64.50%), Postives = 182/231 (78.79%), Query Frame = 1
Query: 10 EKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
EK+R+ +LEEQL LK AE +NPVFTTALIAGD VIL I KAGL DKIKVVFIDT+ LFPE+++F+ VE HYGFKA Y DCA+ EEF +KYG+D ++ED++EYD+ KVEPL+R LKE+ T+ W+NGRRRDHGFERAAL +WE +K NPLA+W+FEDCW Y+R VPYHPLHD G+ SLGDM ST +V + WF YG ER+GRF+ M+N DGS KTECGIH+
Sbjct: 81 EKSRLAYLEEQLLSDLKNAAERFENPVFTTALIAGDDVILHGINKAGLFDKIKVVFIDTYHLFPETLEFLETVEKHYGFKALRYAPKDCASPEEFEEKYGDDLFLEDVEEYDRLAKVEPLLRGLKENKTKLWVNGRRRDHGFERAALEVWEDEKMNPLAYWTFEDCWKYIRAEGVPYHPLHDDGYPSLGDMHSTLRVDKDKWFQYGMERAGRFQNMQNADGSPKTECGIHT 311
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A7S0Z0Y0_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z0Y0_9CRYP) HSP 1 Score: 316 bits (809), Expect = 7.570e-106 Identity = 146/231 (63.20%), Postives = 183/231 (79.22%), Query Frame = 1
Query: 10 EKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
E+ R+ +LE+QL LK+ AE +NPVFTTALIAGD VIL AI KAGLLD+IKV+FIDT+ LFPE+++F+ +VE HYGFKA Y CA+ EEF +KYG+D ++ED++EYD+ KVEPL+R LKE+ T+ WINGRRRDHGFERAAL +WE +K NPLAFW+FEDCW Y+ VPYHPLHD G+ S+GDM ST +V + WF YG ER+GRF+ M+N DGS KTECGIH+
Sbjct: 41 ERNRLAYLEKQLLSDLKSAAEQFENPVFTTALIAGDDVILHAIHKAGLLDRIKVLFIDTYHLFPETLEFMDKVEGHYGFKALRYGPKGCASPEEFEEKYGDDLFLEDVEEYDRLAKVEPLLRGLKENKTKLWINGRRRDHGFERAALEVWEDEKMNPLAFWTFEDCWNYIHAQGVPYHPLHDDGYPSVGDMHSTLRVDKDKWFQYGMERAGRFQNMQNADGSAKTECGIHT 271
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: L1J678_GUITC (PAPS_reduct domain-containing protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J678_GUITC) HSP 1 Score: 303 bits (776), Expect = 1.470e-100 Identity = 138/229 (60.26%), Postives = 178/229 (77.73%), Query Frame = 1
Query: 16 TRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDKIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
+R+ +LE+Q + L +NPVFTTALIAGD VIL + K+GLL K+K+VFIDT LFPE+++F+ +VE YGFKA +Y+ C T+EEF +KYG+D ++EDI+ YDK KVEPL+R+L+ES T+ WINGRRRD GFERAAL +WE +K NP+AFW+FEDCW Y+ +H VPYHPLHD G+ SLGDM ST +V E WF YG ER+GRF+ M+N DGS+KTECGIH+
Sbjct: 73 SRLKYLEQQAIDDLILAVAKYENPVFTTALIAGDDVILHILHKSGLLPKVKIVFIDTLHLFPETLEFLEKVEKFYGFKAVIYKAEGCETREEFDEKYGDDIFIEDIETYDKVAKVEPLLRALRESKTKLWINGRRRDQGFERAALEVWEKEKMNPIAFWTFEDCWKYIEQHKVPYHPLHDDGYPSLGDMHSTLRVEKEKWFLYGMERAGRFQNMQNPDGSDKTECGIHT 301
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: D8QN92_SELML (PAPS_reduct domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QN92_SELML) HSP 1 Score: 273 bits (698), Expect = 1.290e-88 Identity = 133/233 (57.08%), Postives = 164/233 (70.39%), Query Frame = 1
Query: 19 RIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLDK--IKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEGQKF---NPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
R+ LE Q K L+ E + P F ALIAGD V+LD + K G +K +KV+FIDTF LFPE+ F+ +ED YGFKA+V+ AD TKEE+ K+G D ++ DIDEYDK CKVEP R+L +A INGRRRDHG ERA L + + K PLA+W F DCW+YL+K++VPYHPLHD G+ S+GD+QST VP E WF YGGERSGRF+G+ NKDGS KTECGIHS
Sbjct: 77 RLQHLESQAKSVLQKTIECFERPAFPCALIAGDVVMLDLLHKIGAFEKEAVKVIFIDTFHLFPETYTFLKSLEDKYGFKARVFHAADFNTKEEYLAKHGSDLYIRDIDEYDKICKVEPFNRALSSLQVDAMINGRRRDHGAERAHLEVAQAGKMVNVQPLAYWEFRDCWSYLKKNSVPYHPLHDKGYPSIGDVQSTLPVPKEKWFEYGGERSGRFQGLSNKDGSLKTECGIHS 309
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Match: A0A2R6X602_MARPO (PAPS_reduct domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X602_MARPO) HSP 1 Score: 270 bits (690), Expect = 3.500e-87 Identity = 126/233 (54.08%), Postives = 163/233 (69.96%), Query Frame = 1
Query: 19 RIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGLLD--KIKVVFIDTFFLFPESIDFIHEVEDHYGFKAKVYQCADCATKEEFYDKYGEDYWMEDIDEYDKKCKVEPLMRSLKESDTEAWINGRRRDHGFERAALPLWEG---QKFNPLAFWSFEDCWTYLRKHNVPYHPLHDVGFSSLGDMQSTRKVPLENWFSYGGERSGRFEGMKNKDGSEKTECGIHS 702
R+ LE Q +L+ E + P F ALI GD VILD +++ G D K+K++FIDT LFPE++ F+ VE YG KA ++Q A A K+E+ +KYG D ++ D+DEYD+ CKVEP R+LK + +A +NGRRRDHG ERA L ++EG K PLA+W F DCW Y+ K+ +PYHPLHD G+ S+GDMQST VP WF YGGERSGRF+G+KNKDGS KTECGIH+
Sbjct: 91 RLSILETQALNALRKTIENYQRPAFPCALITGDVVILDLLSRVGAFDDEKVKIIFIDTLHLFPETLTFLAAVEKRYGCKAHIFQAAGMANKQEYDEKYGSDLFIRDVDEYDRICKVEPFSRALKTLEVDAMVNGRRRDHGAERAHLEIFEGGDMAKVQPLAYWEFRDCWDYIEKYQLPYHPLHDQGYPSIGDMQSTLPVPKSQWFEYGGERSGRFQGIKNKDGSTKTECGIHA 323 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79185.15578.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig79185.15578.1 >prot_H-elongata_contig79185.15578.1 ID=prot_H-elongata_contig79185.15578.1|Name=mRNA_H-elongata_contig79185.15578.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=236bp QIFEKTRIDFLEEQLKESLKAVAEMKKNPVFTTALIAGDCVILDAIAKAGback to top mRNA from alignment at H-elongata_contig79185:56..2728- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig79185.15578.1 ID=mRNA_H-elongata_contig79185.15578.1|Name=mRNA_H-elongata_contig79185.15578.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2673bp|location=Sequence derived from alignment at H-elongata_contig79185:56..2728- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig79185:56..2728- >mRNA_H-elongata_contig79185.15578.1 ID=mRNA_H-elongata_contig79185.15578.1|Name=mRNA_H-elongata_contig79185.15578.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1416bp|location=Sequence derived from alignment at H-elongata_contig79185:56..2728- (Himanthalia elongata Himel1 dioecious)back to top |