mRNA_H-elongata_contig79129.15569.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig79129.15569.1 vs. uniprot
Match: D7FVC8_ECTSI (DNA replication licensing factor MCM3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVC8_ECTSI) HSP 1 Score: 538 bits (1387), Expect = 4.010e-185 Identity = 281/293 (95.90%), Postives = 287/293 (97.95%), Query Frame = 1
Query: 1 LQEMPERAPLGQLPRSVDVILDDDLVDRVKPGDRVQITGLYRAVGGASNGSTSGVFRTLIIANNVGVLGKDVGSVQMTPTDIKNIRDIAERDDVLELLAKSLAPSIYGHDHIKKALVLQLLGGEEKNLPNGTHLRGDINLMMVGDPSTAKSQLLRCVLNTAPLAINTSGRGSSGVGLTAAVTTDKASETGERRLEAGAMVLADRGVVCIDEFDKMSEMDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKTKRPQENIGLPDSLLSRFDLLFVVLDQVSAR 879
+QEMPERAPLGQLPRSVDVILDDDLVDRVKPGDRVQITG+YRA+GGASNGSTSGVFRTLIIANNV +LGKDVGSVQMTPTDIKNIR+IAERDDVLELLAKSLAPSIYGHDHIKKALVLQLLGGEEKNL NGTHLRGDINLMMVGDPSTAKSQLLRCVLNTAPLAINTSGRGSSGVGLTAAVTTDK ETGERRLEAGAMVLADRGVVCIDEFDKMSEMDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKTKRPQENIGLPDSLLSRFDLLFVVLDQ+ A
Sbjct: 221 IQEMPERAPLGQLPRSVDVILDDDLVDRVKPGDRVQITGMYRAIGGASNGSTSGVFRTLIIANNVAILGKDVGSVQMTPTDIKNIREIAERDDVLELLAKSLAPSIYGHDHIKKALVLQLLGGEEKNLANGTHLRGDINLMMVGDPSTAKSQLLRCVLNTAPLAINTSGRGSSGVGLTAAVTTDK--ETGERRLEAGAMVLADRGVVCIDEFDKMSEMDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKTKRPQENIGLPDSLLSRFDLLFVVLDQLDAE 511
BLAST of mRNA_H-elongata_contig79129.15569.1 vs. uniprot
Match: A0A835Z466_9STRA (DNA replication licensing factor MCM3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z466_9STRA) HSP 1 Score: 444 bits (1143), Expect = 1.710e-148 Identity = 228/279 (81.72%), Postives = 261/279 (93.55%), Query Frame = 1
Query: 34 QLPRSVDVILDDDLVDRVKPGDRVQITGLYRAVGGASNGSTSGVFRTLIIANNVGVLGKDVGSVQMTPTDIKNIRDIAERDDVLELLAKSLAPSIYGHDHIKKALVLQLLGGEEKNLPNGTHLRGDINLMMVGDPSTAKSQLLRCVLNTAPLAINTSGRGSSGVGLTAAVTTDKASETGERRLEAGAMVLADRGVVCIDEFDKMSEMDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKTKRPQENIGLPDSLLSRFDLLFVVLDQV 870
QLPRS++V+LD+DLVDRVKPGDRVQI+G+YRA+ G+ +G SG+FRT+++ANN+ LG+D V++T D+++IR++A R+D+LELL +SLAPSIYGH+HIK+ALVLQLLGGEEKNL NGTHLRGDINL+MVGDPSTAKSQLLR VLN APLAINT+GRGSSGVGLTAAVTTDK ETGERRLEAGAMVLADRG+VCIDEFDKMSE+DRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKT+RPQENIGLPDSLLSRFDLLFVVLDQ+
Sbjct: 223 QLPRSIEVLLDNDLVDRVKPGDRVQISGVYRAIAGSQDGG-SGLFRTVLLANNIKPLGRDSSLVKVTGQDVQHIRELAPREDILELLGRSLAPSIYGHEHIKRALVLQLLGGEEKNLANGTHLRGDINLLMVGDPSTAKSQLLRAVLNIAPLAINTTGRGSSGVGLTAAVTTDK--ETGERRLEAGAMVLADRGIVCIDEFDKMSEIDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKTRRPQENIGLPDSLLSRFDLLFVVLDQL 498
BLAST of mRNA_H-elongata_contig79129.15569.1 vs. uniprot
Match: A0A059JD37_TRIIM (DNA replication licensing factor MCM3 (Fragment) n=1 Tax=Trichophyton interdigitale (strain MR816) TaxID=1215338 RepID=A0A059JD37_TRIIM) HSP 1 Score: 417 bits (1071), Expect = 5.310e-143 Identity = 217/297 (73.06%), Postives = 253/297 (85.19%), Query Frame = 1
Query: 1 LQEMPERAPLGQLPRSVDVILDDDLVDRVKPGDRVQITGLYRAVGGASNGSTSGVFRTLIIANNVGVLGKDVGS--VQ--MTPTDIKNIRDIAERDDVLELLAKSLAPSIYGHDHIKKALVLQLLGGEEKNLPNGTHLRGDINLMMVGDPSTAKSQLLRCVLNTAPLAINTSGRGSSGVGLTAAVTTDKASETGERRLEAGAMVLADRGVVCIDEFDKMSEMDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKTKRPQENIGLPDSLLSRFDLLFVVLDQVSAR 879
+QEMPERAP GQLPR VDVILDDDLVDR KPGDR+Q+ G+YR++G + S+S FRT++IANNV L G VQ +T TD++NI +A++ ++ +LL++SLAPSIYGHD+IK+A++L LLGG EKNL NGTHLRGDIN++MVGDPSTAKSQLLR VLNTAPLAI T+GRGSSGVGLTAAVTTDK ETGERRLEAGAMVL DRGVVCIDEFDKMS++DRVAIHEVMEQQTVTIAKAGIH SLNARCSV+AAANP++GQYD K P +NI LPDSLLSRFDLLFVV D + +
Sbjct: 4 IQEMPERAPAGQLPRGVDVILDDDLVDRAKPGDRIQLVGVYRSLGNRNTNSSSSTFRTVVIANNVIHLASKSGGGIVQPTITDTDVRNINKLAKKKNIFDLLSQSLAPSIYGHDYIKRAILLMLLGGMEKNLDNGTHLRGDINILMVGDPSTAKSQLLRFVLNTAPLAIATTGRGSSGVGLTAAVTTDK--ETGERRLEAGAMVLGDRGVVCIDEFDKMSDVDRVAIHEVMEQQTVTIAKAGIHTSLNARCSVIAAANPIFGQYDTHKDPHKNIALPDSLLSRFDLLFVVTDDIDDK 298
BLAST of mRNA_H-elongata_contig79129.15569.1 vs. uniprot
Match: A0A4P9Z800_9FUNG (DNA replication licensing factor MCM3 n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z800_9FUNG) HSP 1 Score: 422 bits (1084), Expect = 6.340e-143 Identity = 223/293 (76.11%), Postives = 254/293 (86.69%), Query Frame = 1
Query: 1 LQEMPERAPLGQLPRSVDVILDDDLVDRVKPGDRVQITGLYRAVGGASNGSTSGVFRTLIIANNVGVLGKDVGSV---QMTPTDIKNIRDIAERDDVLELLAKSLAPSIYGHDHIKKALVLQLLGGEEKNLPNGTHLRGDINLMMVGDPSTAKSQLLRCVLNTAPLAINTSGRGSSGVGLTAAVTTDKASETGERRLEAGAMVLADRGVVCIDEFDKMSEMDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKTKRPQENIGLPDSLLSRFDLLFVVLDQV 870
+QEMPERAP GQLPRSVDVILDDDL DRVKPGDRVQI G YR++GG G + FRTLI+AN++ VLG G++ MT D++NIR +A+R +V +LLA+S+APSIYGH++IKK+L+L LLGG E+NL NGTH+RGDINL+MVGDPSTAKSQLLR VLN APLAI T+GRGSSGVGLTAAVT DK ETGERRLEAGAMVL DRGVVCIDEFDKMS+ DRVAIHEVMEQQTVTIAKAGIH SLNARCSVVAAANPVYGQYD+ K+P +NI LPDSLLSRFDLLFVVLD++
Sbjct: 221 IQEMPERAPPGQLPRSVDVILDDDLADRVKPGDRVQICGTYRSLGG---GQATSTFRTLILANHIQVLGGKSGAIAAPHMTANDVQNIRQVAKRRNVFDLLARSVAPSIYGHEYIKKSLLLLLLGGMERNLANGTHIRGDINLLMVGDPSTAKSQLLRYVLNIAPLAIATTGRGSSGVGLTAAVTHDK--ETGERRLEAGAMVLGDRGVVCIDEFDKMSDADRVAIHEVMEQQTVTIAKAGIHTSLNARCSVVAAANPVYGQYDEHKKPHQNIALPDSLLSRFDLLFVVLDRI 508
BLAST of mRNA_H-elongata_contig79129.15569.1 vs. uniprot
Match: A0A7J8MYA3_9ROSI (DNA replication licensing factor MCM3 n=4 Tax=Gossypium TaxID=3633 RepID=A0A7J8MYA3_9ROSI) HSP 1 Score: 422 bits (1085), Expect = 1.620e-142 Identity = 217/294 (73.81%), Postives = 252/294 (85.71%), Query Frame = 1
Query: 1 LQEMPERAPLGQLPRSVDVILDDDLVDRVKPGDRVQITGLYRAVGGASNGSTSGVFRTLIIANNVGVLGKDVGSVQMTPTDIKNIRDIAERDDVLELLAKSLAPSIYGHDHIKKALVLQLLGGEEKNLPNGTHLRGDINLMMVGDPSTAKSQLLRCVLNTAPLAINTSGRGSSGVGLTAAVTTDKASETGERRLEAGAMVLADRGVVCIDEFDKMSEMDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKTKRPQENIGLPDSLLSRFDLLFVVLDQVSARV 882
+QE+PE A GQLPR+VDVI++DDLVD KPGDRV I GLY+A+ G S GS +GVFRT++IANNV +L K+ + +P D+KNI+ IAERDD +LL SLAPSIYGH IKKA+VL +LGG EKNL NGTHLRGDIN+MMVGDPS AKSQLLR ++N APLAI+T+GRGSSGVGLTAAVT+D+ ETGERRLEAGAMVL DRGVVCIDEFDKM++ DRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANP+YG YD++ P +NIGLPDSLLSRFDLLF+VLDQ+ A +
Sbjct: 68 IQEVPENAAPGQLPRTVDVIVEDDLVDSCKPGDRVAIVGLYKALPGKSKGSVNGVFRTVLIANNVSLLNKEANAPIYSPEDLKNIKKIAERDDTFDLLGNSLAPSIYGHSWIKKAVVLLMLGGVEKNLKNGTHLRGDINMMMVGDPSVAKSQLLRAIINIAPLAISTTGRGSSGVGLTAAVTSDQ--ETGERRLEAGAMVLGDRGVVCIDEFDKMNDQDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPIYGTYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDADI 359
BLAST of mRNA_H-elongata_contig79129.15569.1 vs. uniprot
Match: A0A075AVQ8_ROZAC (DNA replication licensing factor MCM3 n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AVQ8_ROZAC) HSP 1 Score: 430 bits (1105), Expect = 1.700e-142 Identity = 219/291 (75.26%), Postives = 258/291 (88.66%), Query Frame = 1
Query: 1 LQEMPERAPLGQLPRSVDVILDDDLVDRVKPGDRVQITGLYRAVGGASNGSTSGVFRTLIIANNVGVLGKDVGSVQMTPTDIKNIRDIAERDDVLELLAKSLAPSIYGHDHIKKALVLQLLGGEEKNLPNGTHLRGDINLMMVGDPSTAKSQLLRCVLNTAPLAINTSGRGSSGVGLTAAVTTDKASETGERRLEAGAMVLADRGVVCIDEFDKMSEMDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKTKRPQENIGLPDSLLSRFDLLFVVLDQVS 873
+QEMPE+AP GQLPRS+DV+LD+DLVDRVKPGDRVQI G+YRA G + NG GVFRT+++ANNV ++GKDV +T DI+NI+ + +R D+ E+++KSLAPSIYGH++IKKAL+L LLGG EKNL NGTHLRGDIN+MMVGDPSTAKSQLLR VLN APLAI T+GRGSSGVGLTAAV +DK ETGERRLEAGAMVLADRG+VCIDEFDKMSE+DRVAIHEVMEQQTVTIAKAGIHA+LNARCSV+AAANPV+GQY + PQ+NI LPDSLLSRFDL+F+VLD+++
Sbjct: 207 IQEMPEKAPAGQLPRSIDVMLDEDLVDRVKPGDRVQIIGIYRAAGSSFNGIIPGVFRTIVLANNVKLIGKDVNQTVITDKDIQNIKKMGKRRDIFEIMSKSLAPSIYGHEYIKKALLLFLLGGFEKNLENGTHLRGDINIMMVGDPSTAKSQLLRFVLNIAPLAIATTGRGSSGVGLTAAVVSDK--ETGERRLEAGAMVLADRGIVCIDEFDKMSEVDRVAIHEVMEQQTVTIAKAGIHATLNARCSVLAAANPVFGQYRENLSPQDNIRLPDSLLSRFDLMFIVLDEMN 495
BLAST of mRNA_H-elongata_contig79129.15569.1 vs. uniprot
Match: A0A0F7S8U2_9BASI (DNA replication licensing factor MCM3 n=1 Tax=Sporisorium scitamineum TaxID=49012 RepID=A0A0F7S8U2_9BASI) HSP 1 Score: 423 bits (1088), Expect = 1.780e-142 Identity = 218/297 (73.40%), Postives = 252/297 (84.85%), Query Frame = 1
Query: 1 LQEMPERAPLGQLPRSVDVILDDDLVDRVKPGDRVQITGLYRAVGGASNGSTSGVFRTLIIANNVGVLGKDVGS----VQMTPTDIKNIRDIAERDDVLELLAKSLAPSIYGHDHIKKALVLQLLGGEEKNLPNGTHLRGDINLMMVGDPSTAKSQLLRCVLNTAPLAINTSGRGSSGVGLTAAVTTDKASETGERRLEAGAMVLADRGVVCIDEFDKMSEMDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKTKRPQENIGLPDSLLSRFDLLFVVLDQVSAR 879
+QEMPERAP GQLPRS+DV++DDD+VDR KPGDR+Q+ G+YR++G S+S FRTL+I NN+ +L G +T TDI+NI IA+R +V LL++SLAPSIYGH +IKKA++L LLGGEEKNLPNGTH+RGDIN++MVGDPSTAKSQ+LR VLNTAPLAI T+GRGSSGVGLTAAVTTDK ETGERRLEAGAMVLADRGV+CIDEFDKMS++DRVAIHEVMEQQTVTIAKAGIH SLNARCSVVAAANP+YGQYD K P +NI LPDSLLSRFDLLFVV D V +
Sbjct: 210 IQEMPERAPPGQLPRSIDVVMDDDMVDRCKPGDRIQLVGMYRSLGNRVGQSSSSTFRTLLIGNNINLLSSKAGGGIVQAHITDTDIRNINKIAKRKNVFNLLSQSLAPSIYGHGYIKKAVLLLLLGGEEKNLPNGTHIRGDINILMVGDPSTAKSQMLRFVLNTAPLAIATTGRGSSGVGLTAAVTTDK--ETGERRLEAGAMVLADRGVICIDEFDKMSDVDRVAIHEVMEQQTVTIAKAGIHTSLNARCSVVAAANPIYGQYDVHKDPHKNIALPDSLLSRFDLLFVVTDDVDEQ 504
BLAST of mRNA_H-elongata_contig79129.15569.1 vs. uniprot
Match: A0A8B8R3B9_9MYRT (DNA replication licensing factor MCM3 n=2 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8R3B9_9MYRT) HSP 1 Score: 418 bits (1074), Expect = 9.020e-142 Identity = 212/294 (72.11%), Postives = 250/294 (85.03%), Query Frame = 1
Query: 1 LQEMPERAPLGQLPRSVDVILDDDLVDRVKPGDRVQITGLYRAVGGASNGSTSGVFRTLIIANNVGVLGKDVGSVQMTPTDIKNIRDIAERDDVLELLAKSLAPSIYGHDHIKKALVLQLLGGEEKNLPNGTHLRGDINLMMVGDPSTAKSQLLRCVLNTAPLAINTSGRGSSGVGLTAAVTTDKASETGERRLEAGAMVLADRGVVCIDEFDKMSEMDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKTKRPQENIGLPDSLLSRFDLLFVVLDQVSARV 882
+QEMPE + GQLPR+VD+I++DDLVD KPGDRV I G+Y+A+ G S G +GVFRT+++ANNV +L K+ + TP D+KNI+ IA RDD +LL SLAPSIYGH IKKA++L +LGG EKNL NGTHLRGDIN+MMVGDPS AKSQLLR ++N APLAI+T+GRGSSGVGLTAAVT+D+ ETGERRLEAGAMVLADRGVVCIDEFDKM++ DRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANP+YG YD++ P +NIGLPDSLLSRFDLLF+VLDQ+ +
Sbjct: 195 MQEMPENSAPGQLPRTVDIIVEDDLVDSCKPGDRVAIVGVYKAIPGKSKGGVNGVFRTVLVANNVSLLNKEANAPIYTPEDLKNIKKIAGRDDTFDLLGNSLAPSIYGHSWIKKAVILLMLGGVEKNLKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQ--ETGERRLEAGAMVLADRGVVCIDEFDKMNDQDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPIYGTYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPDI 486
BLAST of mRNA_H-elongata_contig79129.15569.1 vs. uniprot
Match: A0A7J8SAR6_GOSDV (DNA replication licensing factor MCM3 n=1 Tax=Gossypium davidsonii TaxID=34287 RepID=A0A7J8SAR6_GOSDV) HSP 1 Score: 421 bits (1083), Expect = 1.250e-141 Identity = 216/294 (73.47%), Postives = 251/294 (85.37%), Query Frame = 1
Query: 1 LQEMPERAPLGQLPRSVDVILDDDLVDRVKPGDRVQITGLYRAVGGASNGSTSGVFRTLIIANNVGVLGKDVGSVQMTPTDIKNIRDIAERDDVLELLAKSLAPSIYGHDHIKKALVLQLLGGEEKNLPNGTHLRGDINLMMVGDPSTAKSQLLRCVLNTAPLAINTSGRGSSGVGLTAAVTTDKASETGERRLEAGAMVLADRGVVCIDEFDKMSEMDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKTKRPQENIGLPDSLLSRFDLLFVVLDQVSARV 882
+QE+PE A GQLPR+VD I++DDLVD KPGDRV I G+Y+A+ G S GS +GVFRT++IANNV +L K+ + TP D+KNI+ IAERDD +LL SLAPSIYGH IKKA+VL +LGG EKNL NGTHLRGDIN+MMVGDPS AKSQLLR ++N APLAI+T+GRGSSGVGLTAAVT+D+ ETGERRLEAGAMVL DRGVVCIDEFDKM++ DRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANP+YG YD++ P +NIGLPDSLLSRFDLLF+VLDQ+ A +
Sbjct: 192 IQEVPENAAPGQLPRTVDAIVEDDLVDSCKPGDRVAIVGIYKALPGKSKGSVNGVFRTVLIANNVSLLNKEANAPIYTPEDLKNIKKIAERDDTFDLLGNSLAPSIYGHSWIKKAVVLLMLGGVEKNLKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQ--ETGERRLEAGAMVLGDRGVVCIDEFDKMNDQDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPIYGTYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDADI 483
BLAST of mRNA_H-elongata_contig79129.15569.1 vs. uniprot
Match: A0A061GKY5_THECC (DNA replication licensing factor MCM3 (Fragment) n=2 Tax=Malvaceae TaxID=3629 RepID=A0A061GKY5_THECC) HSP 1 Score: 419 bits (1076), Expect = 1.370e-141 Identity = 214/294 (72.79%), Postives = 252/294 (85.71%), Query Frame = 1
Query: 1 LQEMPERAPLGQLPRSVDVILDDDLVDRVKPGDRVQITGLYRAVGGASNGSTSGVFRTLIIANNVGVLGKDVGSVQMTPTDIKNIRDIAERDDVLELLAKSLAPSIYGHDHIKKALVLQLLGGEEKNLPNGTHLRGDINLMMVGDPSTAKSQLLRCVLNTAPLAINTSGRGSSGVGLTAAVTTDKASETGERRLEAGAMVLADRGVVCIDEFDKMSEMDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPVYGQYDKTKRPQENIGLPDSLLSRFDLLFVVLDQVSARV 882
+QE+PE A GQLPR+VDVI++DDLVD KPGDR+ I G+Y+A+ G S GS +GVFRT++IANNV +L K+ + +P D+KNI+ IAERDD +LL SLAPSI+GH IKKA+VL +LGG EKNL NGTHLRGDIN+MMVGDPS AKSQLLR ++N APLAI+T+GRGSSGVGLTAAVT+D+ ETGERRLEAGAMVL DRGVVCIDEFDKM++ DRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANP+YG YD++ P +NIGLPDSLLSRFDLLF+VLDQ+ A +
Sbjct: 192 IQEVPENAAPGQLPRTVDVIVEDDLVDSCKPGDRLAIVGIYKALPGKSKGSVNGVFRTVLIANNVSLLNKEANAPIYSPEDLKNIKKIAERDDTFDLLGNSLAPSIFGHSWIKKAVVLLMLGGVEKNLKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQ--ETGERRLEAGAMVLGDRGVVCIDEFDKMNDQDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPIYGTYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDADI 483 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig79129.15569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig79129.15569.1 >prot_H-elongata_contig79129.15569.1 ID=prot_H-elongata_contig79129.15569.1|Name=mRNA_H-elongata_contig79129.15569.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=291bp MPERAPLGQLPRSVDVILDDDLVDRVKPGDRVQITGLYRAVGGASNGSTSback to top mRNA from alignment at H-elongata_contig79129:384..2842+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig79129.15569.1 ID=mRNA_H-elongata_contig79129.15569.1|Name=mRNA_H-elongata_contig79129.15569.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2459bp|location=Sequence derived from alignment at H-elongata_contig79129:384..2842+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig79129:384..2842+ >mRNA_H-elongata_contig79129.15569.1 ID=mRNA_H-elongata_contig79129.15569.1|Name=mRNA_H-elongata_contig79129.15569.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1746bp|location=Sequence derived from alignment at H-elongata_contig79129:384..2842+ (Himanthalia elongata Himel1 dioecious)back to top |