mRNA_H-elongata_contig7909.15567.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7909.15567.1
Unique NamemRNA_H-elongata_contig7909.15567.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A6H5L4N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4N7_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 5.950e-73
Identity = 143/237 (60.34%), Postives = 163/237 (68.78%), Query Frame = 1 
Query:  220 RPRGVKLKLEVVAACWCGARGGIGKWRQRSLRLDPLLAE-AEAGTEDAGLQGGFVRGKSSPKQQEG---GNAFNDPPKDAEGPLRRFWRRLGVARFFGAGNKMPNLKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLWTAAA 918
            R RG    L  VA      R   G  RQ    L  L +E A AG+E+            SPK  E    G A  D  K   GP++R +RR  VARFFGAG KMPN+K+LGLYALLSYGFVSNASY +CV  AWFA+SKKTGLSPLAPGQWQ FLV+YA  +AINN+LRVPRFAL++SLAPAFDRFI FLM+ +GRGK  AT LCV +VNILGT  L+STGILLAS+ SGVP W AAA
Sbjct:   53 RARGQSSDLRRVADTGATPRRWEG--RQGRALLQQLRSEVAAAGSEE------------SPKPSESSTTGGAAVDDGKGEGGPIKRGFRR--VARFFGAGKKMPNVKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLAPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPAFDRFIEFLMKKSGRGKGVATGLCVVLVNILGTFVLLSTGILLASIFSGVPFWPAAA 273
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BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: D7FRK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK2_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.320e-71
Identity = 120/163 (73.62%), Postives = 137/163 (84.05%), Query Frame = 1 
Query:  430 DPPKDAEGPLRRFWRRLGVARFFGAGNKMPNLKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLWTAAA 918
            D  +   GP++R  RR  VARFFGAG KMPN+K+LGLYALLSYGFVSNASY +CV  AWFA+SKKTGLSPL+PGQWQ FLV+YA  +AINN+LRVPRFAL++SLAPAFDRFI FLM+ TGRGK  AT LCVF+VN LGT AL+STGILLAS+ SGVP W AAA
Sbjct:   82 DDSEGEGGPIKRGLRR--VARFFGAGKKMPNIKELGLYALLSYGFVSNASYAICVGLAWFASSKKTGLSPLSPGQWQVFLVSYATLWAINNVLRVPRFALSVSLAPAFDRFIEFLMKKTGRGKGVATGLCVFLVNFLGTFALLSTGILLASMFSGVPFWPAAA 242
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BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A835YJB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJB4_9STRA)

HSP 1 Score: 170 bits (431), Expect = 2.210e-45
Identity = 91/163 (55.83%), Postives = 113/163 (69.33%), Query Frame = 1 
Query:  421 AFNDPPKDAEGPLRRFWRRLGVARFF-GAGNKMPNLKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLW 906
            A  DP K   GP+ +      V  FF G G     L ++GLYA+LSYGFVSNASY +C+S +W+  SK++GLSPLAPGQWQ FL  Y   F  NNI+R  R AL+++LAPAFDR IAF+M  T R +  AT +CVF VN+LGT AL+S GILLASL SGVP++
Sbjct:  101 AVPDPAK--RGPVGK------VKLFFSGDGKNRQKLAKMGLYAVLSYGFVSNASYAICLSVSWYLASKRSGLSPLAPGQWQFFLSVYGGLFVFNNIIRPARLALSLALAPAFDRLIAFIMAKTKRSRAVATAICVFFVNVLGTTALMSGGILLASLFSGVPVF 255
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BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A6V1QBW0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QBW0_HETAK)

HSP 1 Score: 139 bits (350), Expect = 7.240e-34
Identity = 66/128 (51.56%), Postives = 91/128 (71.09%), Query Frame = 1 
Query:  523 LKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLW 906
            L+ LG  ALLSYG+VSN SY +C+S AW+  ++++GLSPLAPGQW  FL  Y  FF + N++R  RFA ++ + P FDR +AF+M+ TG  K  A  + VF+VNI GT  L+ TG+ LASL +GVP++
Sbjct:  120 LRSLGAAALLSYGWVSNTSYMICLSLAWYVHARRSGLSPLAPGQWPQFLAVYGGFFVVQNVIRPLRFAFSVFMTPVFDRMVAFIMKRTGLSKPKAFGVTVFLVNICGTFTLLFTGVTLASLAAGVPIF 247
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BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A1Z5KKJ3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKJ3_FISSO)

HSP 1 Score: 131 bits (330), Expect = 7.590e-32
Identity = 66/128 (51.56%), Postives = 88/128 (68.75%), Query Frame = 1 
Query:  523 LKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLW 906
            L +LGL A+LSYG+VSN SY V VS AWF  SK+TG SPLAPGQW+ FL  YA FF  NNI+R  R A+A+ ++P FD F+  +      GK  A  + V + N++GT++ +  GI LAS+L+GVP+W
Sbjct:   65 LGKLGLAAVLSYGWVSNMSYCVSVSLAWFIFSKQTGKSPLAPGQWKGFLAVYAGFFVFNNIVRPLRLAVAVGVSPKFDAFVKRVQDKLQVGKPLAVTITVILANVVGTISFMCLGIFLASILAGVPVW 192
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BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A448YVF5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVF5_9STRA)

HSP 1 Score: 132 bits (331), Expect = 3.440e-31
Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = 1 
Query:  523 LKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLW 906
            L ++GL ALLSYGFVSN SY   VS AWF  SKKTGLSPLAPGQW+ FL  YA F+  NN +R  R A+++ + P FD+ +A + R T   K+ +  + VF+ N+ GT +L+S GI +ASL +GVP++
Sbjct:  134 LAKMGLSALLSYGFVSNISYCFTVSLAWFGFSKKTGLSPLAPGQWKGFLAVYAGFYVFNNFIRPMRLAVSIGVTPYFDKAVAAIQRKTKFSKSVSIGIVVFLANVCGTTSLMSLGIYIASLAAGVPIF 261
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BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A482SRT9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRT9_9ARCH)

HSP 1 Score: 127 bits (320), Expect = 5.140e-31
Identity = 65/127 (51.18%), Postives = 88/127 (69.29%), Query Frame = 1 
Query:  523 LKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPL 903
            L +LGL ALL+YGFVSN SY  C+  AW A  KK  LSPLAPGQW+AFL+ Y   +A NN++R  RF L+++L+PAFDR I F  R T   K  AT L V +VN+ GT++ ++ G+ LA+ ++ +PL
Sbjct:   21 LTKLGLNALLAYGFVSNVSYITCLIIAWVAHGKKYSLSPLAPGQWKAFLLIYTGLWAANNVIRPVRFTLSLALSPAFDRLIDFFRRKTSLTKAQATGLVVVLVNVCGTISYLTFGLFLATRIAKIPL 147
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BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A6U6GPR6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6GPR6_9STRA)

HSP 1 Score: 128 bits (321), Expect = 6.990e-30
Identity = 67/132 (50.76%), Postives = 87/132 (65.91%), Query Frame = 1 
Query:  523 LKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLWTAAA 918
            L ++G+ ALLSYGFVSN SY V VS AW+  SKKTGLSPLAPGQW+ FL  YA F+  NN +R  R ALA  +   FD  + F+ R T   ++ +    VF+ N  GTLA +S GI+LAS+ +GVP++   A
Sbjct:  125 LAKMGMSALLSYGFVSNMSYSVSVSLAWYGFSKKTGLSPLAPGQWKPFLAVYAGFYVFNNFVRPIRVALAAGVTKYFDATVNFIQRKTKFSRSASVGTVVFLANFCGTLAAMSFGIMLASIAAGVPVFPPKA 256
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BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: A0A1E7FWD1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWD1_9STRA)

HSP 1 Score: 121 bits (304), Expect = 3.570e-29
Identity = 61/113 (53.98%), Postives = 78/113 (69.03%), Query Frame = 1 
Query:  523 LKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALIS 861
            L ++GL ALLSYGFVSN SY V V  AWF  SKKTGLSPLAPGQW  FL  YA F+  NNI+R  R A+++ + P FD+ +A + R TG  KT +  + VF+ NI GT +L++
Sbjct:    4 LAKMGLSALLSYGFVSNMSYCVSVGLAWFGFSKKTGLSPLAPGQWPKFLAVYAGFYVFNNIVRPIRLAISIGVTPYFDKAVATIQRKTGFNKTLSIGIVVFLANICGTTSLMA 116
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BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Match: K0S7R0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S7R0_THAOC)

HSP 1 Score: 125 bits (313), Expect = 1.100e-28
Identity = 67/172 (38.95%), Postives = 99/172 (57.56%), Query Frame = 1 
Query:  391 SSPKQQEGGNAFNDPPKDAEGPLRRFWRRLGVARFFGAGNKMPNLKQLGLYALLSYGFVSNASYGVCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAMSLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASLLSGVPLW 906
            S+P  +    A + PP +    L +           G   +   L +LGL ALLSYGFVSN SY V +S +WF  SK+TGLSPLA GQW+ FL  Y  F+  NNI+R  RF  ++ +A  F++F+ F+ R +   + +A  + VF+ N+ GT A +  G+ +AS  +GVP++
Sbjct:   91 SAPSDEVDAPAVSLPPSEKRSILSKIKSAFSDKNESGLTGR-ERLSKLGLSALLSYGFVSNMSYAVTLSLSWFIHSKRTGLSPLAEGQWKPFLAVYGGFYVFNNIIRPLRFGASVLVAKYFEQFVKFIQRKSHLSRKWAIGVVVFLANVCGTFAAMGLGVFIASTAAGVPIF 261
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7909.15567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4N7_9PHAE5.950e-7360.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRK2_ECTSI1.320e-7173.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YJB4_9STRA2.210e-4555.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1QBW0_HETAK7.240e-3451.56Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z5KKJ3_FISSO7.590e-3251.56Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A448YVF5_9STRA3.440e-3151.56Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A482SRT9_9ARCH5.140e-3151.18Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A6U6GPR6_9STRA6.990e-3050.76Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1E7FWD1_9STRA3.570e-2953.98Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
K0S7R0_THAOC1.100e-2838.95Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7909contigH-elongata_contig7909:1216..9175 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score237.3
Seed ortholog evalue8.3e-60
Seed eggNOG ortholog2880.D7FRK2
EggNOG OGs2CBM0@1,2S8NT@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size1727
Cds size786
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931195.0314314-UTR-H-elongata_contig7909:1215..20211622931195.0314314-UTR-H-elongata_contig7909:1215..2021Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7909 1216..2021 -
1691679736.7294993-UTR-H-elongata_contig7909:1215..20211691679736.7294993-UTR-H-elongata_contig7909:1215..2021Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7909 1216..2021 -
1622931195.312741-UTR-H-elongata_contig7909:9040..91751622931195.312741-UTR-H-elongata_contig7909:9040..9175Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7909 9041..9175 -
1691679736.807877-UTR-H-elongata_contig7909:9040..91751691679736.807877-UTR-H-elongata_contig7909:9040..9175Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7909 9041..9175 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931195.0516455-CDS-H-elongata_contig7909:2021..20501622931195.0516455-CDS-H-elongata_contig7909:2021..2050Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7909 2022..2050 -
1691679736.74028-CDS-H-elongata_contig7909:2021..20501691679736.74028-CDS-H-elongata_contig7909:2021..2050Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7909 2022..2050 -
1622931195.0739524-CDS-H-elongata_contig7909:2272..24541622931195.0739524-CDS-H-elongata_contig7909:2272..2454Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7909 2273..2454 -
1691679736.7510645-CDS-H-elongata_contig7909:2272..24541691679736.7510645-CDS-H-elongata_contig7909:2272..2454Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7909 2273..2454 -
1622931195.0913925-CDS-H-elongata_contig7909:4052..41341622931195.0913925-CDS-H-elongata_contig7909:4052..4134Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7909 4053..4134 -
1691679736.758859-CDS-H-elongata_contig7909:4052..41341691679736.758859-CDS-H-elongata_contig7909:4052..4134Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7909 4053..4134 -
1622931195.1093607-CDS-H-elongata_contig7909:4522..46861622931195.1093607-CDS-H-elongata_contig7909:4522..4686Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7909 4523..4686 -
1691679736.7668574-CDS-H-elongata_contig7909:4522..46861691679736.7668574-CDS-H-elongata_contig7909:4522..4686Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7909 4523..4686 -
1622931195.124248-CDS-H-elongata_contig7909:5297..53531622931195.124248-CDS-H-elongata_contig7909:5297..5353Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7909 5298..5353 -
1691679736.7746837-CDS-H-elongata_contig7909:5297..53531691679736.7746837-CDS-H-elongata_contig7909:5297..5353Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7909 5298..5353 -
1622931195.1440413-CDS-H-elongata_contig7909:6495..66941622931195.1440413-CDS-H-elongata_contig7909:6495..6694Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7909 6496..6694 -
1691679736.7863193-CDS-H-elongata_contig7909:6495..66941691679736.7863193-CDS-H-elongata_contig7909:6495..6694Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7909 6496..6694 -
1622931195.2957788-CDS-H-elongata_contig7909:8966..90401622931195.2957788-CDS-H-elongata_contig7909:8966..9040Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7909 8967..9040 -
1691679736.798471-CDS-H-elongata_contig7909:8966..90401691679736.798471-CDS-H-elongata_contig7909:8966..9040Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7909 8967..9040 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7909.15567.1prot_H-elongata_contig7909.15567.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7909 2022..9040 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7909.15567.1

>prot_H-elongata_contig7909.15567.1 ID=prot_H-elongata_contig7909.15567.1|Name=mRNA_H-elongata_contig7909.15567.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=262bp
MDTLGATSPSNRRWSAGTCSRSIHSVTGRPRGVKLKLEVVAACWCGARGG
IGKWRQRSLRLDPLLAEAEAGTEDAGLQGGFVRGKSSPKQQEGGNAFNDP
PKDAEGPLRRFWRRLGVARFFGAGNKMPNLKQLGLYALLSYGFVSNASYG
VCVSFAWFATSKKTGLSPLAPGQWQAFLVTYAAFFAINNILRVPRFALAM
SLAPAFDRFIAFLMRTTGRGKTFATILCVFVVNILGTLALISTGILLASL
LSGVPLWTAAA*
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mRNA from alignment at H-elongata_contig7909:1216..9175-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7909.15567.1 ID=mRNA_H-elongata_contig7909.15567.1|Name=mRNA_H-elongata_contig7909.15567.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7960bp|location=Sequence derived from alignment at H-elongata_contig7909:1216..9175- (Himanthalia elongata Himel1 dioecious)
TTCGCTAGAGCTGGAGCTGGAGCTGGAGCCTTCTACTCTCCGAGGATTGT
GCCACGTCCTGCCGGTAAAGATATTCAGAGGGATAGATTCGCTGGAAGAG
CTACTGGATTTTGCAGCCAGTCGGTAAGGCAAGGGATGGACACACTTGGA
GCTACATCTCCGTCCAACCGACGGTGGTCAGCAGGAACATGCTCACGCTC
TATTCATAGGTGATTATTTATTTATTTTCAGATGTTAAAAGTGGAAATAA
AAAAGCTCTCTATTTCATTACCTACCGTACAGTAGTATTGGCGGTGTTAG
AGACAAAATCATTACCGTAGTCAGCAAATGCGTTTTTCCATAGACGTCCG
CTGTATATTGATTATGTTGATTCTTGTACCATAGGCTCTACAACAGCAGC
AGGTCTTGAGGGAGAGGCGCGAAGGCGGTAAATGGATAACAGTACTATTA
ATACTAATACTAATACTGTCGTATTTGTTGACACTGTGTTGTGTTGTGTT
GTCATCCCATTTATTCTGGACGTCATAATCTACTGCACTTGTGGACGTAC
CAGCCGAGGTCACGCAGGACGGTCACGCGTGATTTCTCCACCTTCCTTCT
GCGATGCTTTCCTTAATTTTTTGTTTAACCTTGAACTCATTCCAACCCTC
CGAACATCCACATCTTCTTAGCGCCGTGAGAGTATCGCGAGAAGGATTCA
GCCGTCATAGTCTCTTTTTCTCTTTGACCGTGAAGTCGAATTTTGTGTTC
CCACGAAATAATCGTATCGTTCTCCACTACCAGGACTACCAGGTAATTGT
TGGGCATGATGTGCGAGAACCGTTGACCAATCACGATCAATTTAGTATTT
ATTACTATTGGGGAATGAACACGATTAATTCACCACATAAGTGTGTGACG
ATTTTGTGCTCAAAAGTAGTAATGTACATATTCGAACCTGACGATAGTTG
GTCCCCTGGATTACACCTCTCACGGTCCTAAGAAGGCGTGGATGTTCGGA
GGGTTGAAATGAGTTCATGTTTTTTAAAATAAAAATCCCAGTACGTCTGA
CAGCGCCGAGATTCGAACTCAGATCCCAACGTCAGAAGGCTTCGAGGTTA
TCAACTGAGCCATCAGGGCGCTCGATTGGTGCACAGAAGTTGTTTAAACC
CGCCGTTTCATACGGAGAGTTTTTTCACTTATAAGTTATAATTGCATTTT
TCACGTTTAGTTGACCGACGCCTCCATACGCACGGAATTAAAATGAACAA
GCATCTGATTTTTCGTGAACTGTTAGCTTCAATTAAAATTAGCTTAAAAG
TTTAAATTCAAATTTAATTCAAGGCCATAGGTGGTAGGCCTAGCAACATC
TTCGCCCAATCTCTACACCACATAGACTTGATGGGAGACCGTGAAAAGCA
GCCGCAGTAACATGGGACGTCGAATGGTGGTGGCAACCCAAAGCGCCCTC
GATTTGTCTCGCCCCAAGTTCCAGCTAGGGGACGTGTCGCTGCCATGTTT
GAAATTTTAGCGGGGTGGACCAGAGAGTGTATCTTTTGATTTCAGGAGGG
TGCTGTACACCAGTAAAAGTAGCACAGCAGTCAGGGTGTCGTTTATGCAT
AACTACACGGCCGTTACAAACAGGGTTGGTAGACATCACTTTCTTCCTCG
CGAGGCATACCGTTGCGGGCTGAAAATCGTCGCTTCAAATATATGTGGAG
GTCATCTTGGCCTTTCATTTAAAGCTCTCTCGTTTTTGCCTAGCAAGCTG
CAGAGGTGTGTGCGTCTCTTGAAAAATGGCGGGGCATTCTTTGTTTGTGC
GTTGTTCAAAAAAGGCTTCGAAGTTTTTTCCCTTCCTGACTACTGCTGCT
GCTGGTAGCTCTTAACATCCCTCGCAAAGCCTGGGAGGCTACGGATAGCT
GACATGGTCTGCGTGCGCTTCAGGTCGGAGGTCTGGCTCTGGCTCATAGC
AATATCTTCTGCTGTTGCTTGATGTAAACTCGCTTCAGGCGTGGGAAAAG
AGGCTCGCTAGGGATGTGTTGCTGGTCCAAGCAGAGCAATCTCATTTGAA
ATCCGCCGCCTCTTCGTTTGAGAAAAAATACACATATCATGGGCCCGTAT
GAAACGGACGGTATTTTTGTTCATTTTAATCTATTTTAATTGAAGTTGAA
ATTCAATTAAAATAAAAAAGTAACACTCCGTATGAAACGGCCCTAGACCA
TCCGGGGGATTACTATTAATACTTATATCAATACTAATACCAATACAATA
ATACCAATACTAATTCTATACTAATATTAATACTAATAATACTTTATGCA
TCGTGAACTTCGAATGGGTCACATTCAGCCGAAAAGCACTACATGGAATG
TACTTAGTATAAAGCTACTGAAAGCACATACGGTATTCGCTGGCGAGCCC
GGTAGGGTCTAGAGTTATAGCTATATTCTAAAGTAATAATACGCGTTCTG
ATGCCGATATCGACAACGATTTCTGGTGAAGTGTCACTGGTCGGCCGCGA
GGGGTGAAGCTGAAGTTGGAGGTGGTGGCAGCATGTTGGTGCGGGGCCAG
GGGAGGGATAGGGAAGTGGCGACAGAGATCACTACGGCTCGATCCGCTGC
TGGCAGAAGCAGAAGCGGGAACAGAAGATGCTGGGCTGCAAGGTGGATTT
GTACGAGGGAAAAGCTCTCCAAAACAACAGGTATAGTAGTACAGTACAAG
GTACAGTAGTACAGTAAAGGTACAGCAGTACAATAAAACAGTAAAAGGTA
CAGTAGTACAGTAAATGGTACGACAGATTGTAAGTTCACTCCGTAATCTT
TTAAAAGCTTCCCTCATTCAAACCCTCCGAACATAACACGGTCATTACAC
CAGGCCCGGCGAAATCAATCATCGGTTATCCATTATCGATCATCCAGGGG
ACGGGACGGGATGGGACGGAACAAACTATCGTGTGCGGCCCCAGTATACT
ACTTGTAGGTAGAAATAGAGATATACGACGAGTATCACAATCATACTCTA
TTGTAGCACTCTATTGTTGTACTTAGGGTTATGGTATGAAGCACTCGTTG
CGATACGGTGCCGGCACTCTCGCTATATTTTTCAGGTGTGTTCTTGACCG
GCCCCTCGTACTGAAAGTGTTGAAAGTACTGATCAATAATATTCGGGTAC
TTGAGCATTCTTCGAAATCCGTCAACCGTCAAGTACGATTACGGCTTTCT
TGGAAAGGTAGGCTTCCAGACGGACCAGCTCATCATATTCGATCATTTTT
TAGTAGAAAAATCATGAACTCATTCCAACGCTCCGAACATCCACGCCTTA
GCACCGTGATAGGTGCAATCCAGGGGACCAACTATCGTCAGGTTCGAATC
TGTACATTACTACCTTTGAGTACAAAGTCTTCACATGTGATAATTCGTGT
TCCCCAATAGTAAATTCATCCGGTCGACGGTCAATGCCGGGAACCCGTCA
TTGTCCCGTACACTTATATTTATTCCAAACTACGAACTATTTATGACTTA
CAGTACGGTAGTATGCGACGTTCCCAAAGCACTGTTTTACTCTTCCCACC
ATTATGCACGGCGTTACCTTTACCCGTACGGTTACGGTTACGGATTATTC
TTGGCTATGCACGGTAGACGAGTGGTTGTCTTCGTCTTGTTAGATGACCG
CTGCATGATCGTTACACGACGGCTACATAAATACCATGACCTTGATACGA
TACTGTAATATATTTACCATTCCTATGGGCGATGTTGCCATCAGCCAACC
TTATGCACGCAGTTCCTCTTCCAGACAAGCCTAACCGCTAGTATTGCTAT
AACTACTGTTAATATCGAACAGGAAGGAGGTAACGCTTTCAATGATCCGC
CTAAGGATGCTGAGGGCCCTCTCAGGCGGTGAGCATGTTTGCAAGTTTAT
TGTGATTGACGATGATCCCGATCAGTCATAGTGCAGCAGTAATGATTACG
AACGCAACACGTCTTAAATCGGCCACATTCTGTCTTTTTGGTATTTTTGG
TCGTCTTTTTTTCTCCCCTCGAGACGTGACACGACTAAGCTTTAGAGCTC
GAGGGTCTGGATTAGGACTTAGAAGCATACTGAAGCATACTGGAGTTAAG
TTCAGTGTTGTAACTCTAAAGCTCGTCATATATGAAGATGCTAGATGAAG
ATGCTAGTTTCAGTTCCCTGGTACAGGCCGAGGTATATTGAAGGTATTAA
AGATATTGGTAGCTGAAGTGAAGTGAACAGTGGTCGTGGCCTATATTAGT
AGCTCTATTGTTAATATTTTAGTATCTGGGTGTTGACAAGATAGCCGCAT
GTTTCCGTGCAATGATATACTGTAGGGTAACTCACCGGTAAATGTAAGCG
CTTCACGAGCAAGATCCACGATGACACTATGACGAGACACGATCACACTA
TGACGGAGGAGCACCCCGACTGAAACCACCTAACATCGTGCAAAAAATGT
ACTGGGGACGGCTCGGCGTGGTATGAAAACGCGCGGTAGGTTCTGGAGAC
GGCTTGGTGTGGCGAGATTCTTCGGTGCGGGGAATAAAATGCCGAACCTT
AAGCAGCTCGGCCTTTATGCCCTGCTAAGCTACGGCTTCGTCAGCAATGC
CAGCTACGGCGTGTGCGTGTCGTTCGCCTGGTTCGCCACCTCCAAGAAAA
CAGGTACCGTTACCAGTATGATGTGGAATGTATGTCATGTACGGTATGGC
TTGGTAAGAGACGGCCGTGTGTCGCTTTTGTGGCATCGCTATGTATGGTA
TAGTAGGGTAGAGTAGGGTATGATATGGTATGGCATGGTATGGTATGGTA
TGGTATCATACAGCAGTCTCGCACCTCGGGACATGCGTTACGCCTAAAGA
ACCCCCCTACTCTTGCGTGATGAACGTAAAGCTTTACCTCGCTATACACG
GAGCATACAAACCATCAATCATCAAAGCCGTGGTAGCCGCTGCGGATAGT
GCTCGGTTAAATATATCGGATCAGAATATAGGGTGGCATGTGCAAGGCCG
TGATTGAACCCTCTTGAGTCCCATTGCGGCACTTGCTCCAGGTTTATCTC
CGCTGGCACCGGGTCAATGGCAAGCCTTCTTGGTGACCTACGCGGCTTTC
TTTGCTATTAACAACATACTCCGGTAAGAAATGTCACTCTCACGATATTG
GTGCCGATTTTGCACTCACAGGCCATTCGCTATGACGATAATGATGACCA
GAAAATGCATAATAAATAAATTTTTCCGGGCAGGCGAAATAGAGTCCTGA
TTCTGGCCGCCGCCCGGTACTGAAATCTAAGGCTGTACCGGTAAAAGATA
TCTAAGATAATATAAATAGAAGGCTAGAAGGCTGTTAAAGAGAGAGAAGA
GAAAAAGAAAGCCGAAAGGGTTAGGGTTAGGGTTAGGGTGAAATAAAAGG
CAGTTAAAGAGAGAGAGAGAGAGAGAGAGAGAAAGCCAAATTACGAGGTT
GTTTTGGTGCTCGCGGCCATGCAATGCGCAGGAGCCCAGGCAGCTGGAAG
GTGTCATTTGTAACGAAACCCTAAAGGATAAAGGGACGAGAGGGACGATA
TAATGGACCGACGGTAGGAAGGTGGGCGGGAGAATAGTCCGCATTTTGTA
TCAGGAATGTAAAGCGTGCGAGCTACCGGTACGATTTACCCCGCTGGTAG
AGTGATGGTAGTGAGGAGTAGGATATCGAAAGCAATTGAGGACCCTCGAA
TCCCACAATCGCATCCGAGAGCATGCCTTCGATCGTTCGCTGAACGTAGT
CAATGCAGTCGAGCTATTAATCGAGCTAGAGTGGACGATATCGTGGCATG
AACACAAATTATAGCATGATCGTAAGTAGAAAGCTGAGCTTCACTTATGA
TCAATTCCGGTCGCTTGGACCATAGCAACAGTCGGCTAGAATTACAAACT
CCGACACGGTGCCACCATAAATCCCCGCCCACCGTAGCAGTTTGATGACG
TCATCAGTTGAATCCGCTGCAGAACTGACGATCCTACTCATTCAGTTGAA
TCCGCTTCAAAGATAGAGCTAGCTGTAAAGAGCTGTAGGGTGCGATCCGC
ATATTATCTTCGACCTATTCATGTGTACATTAGGGTTAGGGTTAGGGTTA
GGGTTGCAATGGAACACAAGAGCCCCCCTTGACTTGTTCGCTTTCATTAG
CAATTTATTAGATACCAGGGTAGGCAATAGGCAATAGGACCTCATTCACA
AATTCGAACCTGACGATAAGTTAGTTGGTCCCTCACGATGCTAAGAAGGT
AGGGATGTTCGGAGGGTTGGAATGAGTTCAAGGTTTAAAAAATAACCATA
GTGCCTTACGCAGAGCGCAAAGCAAGGCTAAGGACATGGTCGAAAGCGAT
TCGCGGTAGCTACTTTTCGTTCGCACCAACAGCGCCCAACGGTGTAGACG
TTCATACCAGTATATTCTTACCCTAATCCTAACCCTAACTCAAATATGTT
TTTGATAGATCGAAACGCTGTGCTACATTTGTAACTTACAAGTACTAGTA
TCGCAACCTTTTGTTCCCAGCACGATATGACCGCGACCCTTCGTCTATTA
GTATGATATTAGGATAGTATTAATGCACTATTATACTGTATTTTAATGGG
TTGATGTATTACTGGTGATCTATGATAGTATGATAGTATTAGTGTACTAT
TATACTGTATTTTAATGGGTTGATCTATTACTGGTGACTTTGACCGTTTG
GCTATTACATCTGCGTGGTAGGGTTCCGCGATTCGCGCTCGCGATGAGTC
TGGCGCCAGCCTTCGACCGCTTTATCGCGTTCCTCATGCGAACTACCGGG
AGAGGGAAAACTTTCGCTACCATCCTATGTGTTTTTGTTGTGAACATCCT
GGGAACTTTGGCCCTCATCAGCACCGGTATATTGCTGGCGTCTCTCCTGT
CCGGTGAGTTGAGCCTTGCCTAGTTTAGCATCGCCGTGGACTATTAATAC
TCTAGCATCCCCGCGGAGAGGCTATTAGTCTAGTAGGCTATAAATATTAA
TTCCGACCTTTTACCGGTACCGGTACATTTTTTCGTTAAGACGTATGCTG
AAGGGTTAGGGTTCTGTATGCTCAAGGCTGCTGTTGCTGTTCCCGCTGAT
ACTGTGGTTGTTTGTTGTTTGTTAGGTGTGCCGTTATGGACGGCGGCGGC
CTGATCGGGTTAGGGTTAGGGTTAGGACAGCAACCCTAACTACTGCTACT
ACTGCTGCTGGGACTGCTACTGGTACTGGTGCTGATACTATTGGGTCATC
ACTATTAATAGAGAGAAAGAGAGAGGACTGCTAGTGGTACTGGTACTGAT
ACTATTGGGTCATCACTATTAATAGAGAGAGAGAGAGGGGACTGCTAGTG
GTACTGATACTATTGGGTCATCACTATTAAGAGAGAGAGAGAGAGAGGAC
TGCTAGTGGTACTGATACTATTGGGTCATCACTATTAAGAGAGAGAGAGA
GGGGACTGCTACTGGTACTGATACTATTGGTTATCTTATTACTGTAATAT
AATCTAATGATGATTCACTATTACTAGTTACGGTATTCGCTCTAAGTCCA
GCTGGTGTTTTTGTTATCATTTTGATTTCCAGATAAATGGTTGCCAATTG
CCAACTAAAACGTGTCAAGCCCACGGTACACATAAAAGCGAACCATTCTT
CGGGAGGGAGCTTGGTGTTGAATTGTCTCTCACGGAGCTCGTCGCTAGGA
ACATGTAGCAATTCGGTGTTGTCCCTTACTGGGGGAGTATTAGGGCACCG
GACTGGACTTCTGGGCGAATGTTCTCCACGTCATGAGGGACATGGATGTG
TGTTCTGAGGGTAGAGTCTTGCCTTGTCTTGTCTTGTCTTCATAGGGCTA
GGGTTAGGGCTATAGCACCCCAGGCAAGAAAGAGCAGAATCGTCCCCTTT
AATCTTCTGGACAATACCTACATTCACTCTCTAGACATACTCATTCAATA
CAATTCTTAC
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Coding sequence (CDS) from alignment at H-elongata_contig7909:1216..9175-

>mRNA_H-elongata_contig7909.15567.1 ID=mRNA_H-elongata_contig7909.15567.1|Name=mRNA_H-elongata_contig7909.15567.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1572bp|location=Sequence derived from alignment at H-elongata_contig7909:1216..9175- (Himanthalia elongata Himel1 dioecious)
ATGGACACACTTGGAGCTACATCTCCGTCCAACCGACGGTGGTCAGCAGG
AACATGCTCACGCTCTATTCATAGATGGACACACTTGGAGCTACATCTCC
GTCCAACCGACGGTGGTCAGCAGGAACATGCTCACGCTCTATTCATAGTG
TCACTGGTCGGCCGCGAGGGGTGAAGCTGAAGTTGGAGGTGGTGGCAGCA
TGTTGGTGCGGGGCCAGGGGAGGGATAGGGAAGTGGCGACAGAGATCACT
ACGGCTCGATCCGCTGCTGGCAGAAGCAGAAGCGGGAACAGAAGATGCTG
GGCTGCAAGGTGGATTTGTACGAGGGAAAAGCTCTCCAAAACAACAGTGT
CACTGGTCGGCCGCGAGGGGTGAAGCTGAAGTTGGAGGTGGTGGCAGCAT
GTTGGTGCGGGGCCAGGGGAGGGATAGGGAAGTGGCGACAGAGATCACTA
CGGCTCGATCCGCTGCTGGCAGAAGCAGAAGCGGGAACAGAAGATGCTGG
GCTGCAAGGTGGATTTGTACGAGGGAAAAGCTCTCCAAAACAACAGGAAG
GAGGTAACGCTTTCAATGATCCGCCTAAGGATGCTGAGGGCCCTCTCAGG
CGGAAGGAGGTAACGCTTTCAATGATCCGCCTAAGGATGCTGAGGGCCCT
CTCAGGCGGTTCTGGAGACGGCTTGGTGTGGCGAGATTCTTCGGTGCGGG
GAATAAAATGCCGAACCTTAAGCAGCTCGGCCTTTATGCCCTGCTAAGCT
ACGGCTTCGTCAGCAATGCCAGCTACGGCGTGTGCGTGTCGTTCGCCTGG
TTCGCCACCTCCAAGAAAACAGGTTCTGGAGACGGCTTGGTGTGGCGAGA
TTCTTCGGTGCGGGGAATAAAATGCCGAACCTTAAGCAGCTCGGCCTTTA
TGCCCTGCTAAGCTACGGCTTCGTCAGCAATGCCAGCTACGGCGTGTGCG
TGTCGTTCGCCTGGTTCGCCACCTCCAAGAAAACAGGTTTATCTCCGCTG
GCACCGGGTCAATGGCAAGCCTTCTTGGTGACCTACGCGGCTTTCTTTGC
TATTAACAACATACTCCGGTTTATCTCCGCTGGCACCGGGTCAATGGCAA
GCCTTCTTGGTGACCTACGCGGCTTTCTTTGCTATTAACAACATACTCCG
GGTTCCGCGATTCGCGCTCGCGATGAGTCTGGCGCCAGCCTTCGACCGCT
TTATCGCGTTCCTCATGCGAACTACCGGGAGAGGGAAAACTTTCGCTACC
ATCCTATGTGTTTTTGTTGTGAACATCCTGGGAACTTTGGCCCTCATCAG
CACCGGTATATTGCTGGCGTCTCTCCTGTCCGGGTTCCGCGATTCGCGCT
CGCGATGAGTCTGGCGCCAGCCTTCGACCGCTTTATCGCGTTCCTCATGC
GAACTACCGGGAGAGGGAAAACTTTCGCTACCATCCTATGTGTTTTTGTT
GTGAACATCCTGGGAACTTTGGCCCTCATCAGCACCGGTATATTGCTGGC
GTCTCTCCTGTCCGGTGTGCCGTTATGGACGGCGGCGGCCTGAGTGTGCC
GTTATGGACGGCGGCGGCCTGA
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