mRNA_H-elongata_contig7893.15557.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7893.15557.1 vs. uniprot
Match: D8LCX1_ECTSI (PNP_UDP_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX1_ECTSI) HSP 1 Score: 344 bits (882), Expect = 5.110e-118 Identity = 162/197 (82.23%), Postives = 182/197 (92.39%), Query Frame = 1
Query: 1 AEAAPLIERLGLVEEPGRFPTAAPSKCFSGRYKEAAVSAVVNGKCSRFKVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFKKHDTSIGDVFISSRVRNHDRRIPIPGFKEFGVGDHESHPTPSMVKELGYKEGVVSTGSSFDSTDMDNKMMEENDARVKDMEAAAVAWACEQHNTPMFCIKVVTDLVDGGGVGQ 591
AEA PLIERLGLVE+P +FP AAPSKCFSG Y+ AA++ V NGKCSRF VDQIGTVAAGLSTWLSVE +KPD+VINAGTAGGFKKHDT+IGDVFIS+ V+NHDRRIPIPGFKEFG+G+HESHP P M+KELG+K+GVV+TGSSFD T+ D+KMMEENDARVKDMEAAAVAWACEQH TP+FCIKVVTDLVDGGGVG+
Sbjct: 18 AEACPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDIVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPAPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGE 214
BLAST of mRNA_H-elongata_contig7893.15557.1 vs. uniprot
Match: A0A6H5JA26_9PHAE (PNP_UDP_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA26_9PHAE) HSP 1 Score: 347 bits (889), Expect = 7.370e-118 Identity = 164/197 (83.25%), Postives = 183/197 (92.89%), Query Frame = 1
Query: 1 AEAAPLIERLGLVEEPGRFPTAAPSKCFSGRYKEAAVSAVVNGKCSRFKVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFKKHDTSIGDVFISSRVRNHDRRIPIPGFKEFGVGDHESHPTPSMVKELGYKEGVVSTGSSFDSTDMDNKMMEENDARVKDMEAAAVAWACEQHNTPMFCIKVVTDLVDGGGVGQ 591
AEA+PLIERLGLVE+P +FP AAPSKCFSG Y+ AA++ V NGKCSRF VDQ+GTVAAGLSTWLSVE +KPDLVINAGTAGGFKKHDT+IGDVFIS+ V+NHDRRIPIPGFKEFG+G+HESHPTP M+KELG+K+GVVSTGSSFD T D+KMMEENDARVKDMEAAAVAWACEQH TP+FCIKVVTDLVDGGGVG+
Sbjct: 100 AEASPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQVGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVSTGSSFDHTKTDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGE 296
BLAST of mRNA_H-elongata_contig7893.15557.1 vs. uniprot
Match: A0A835YY09_9STRA (Nucleoside phosphorylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY09_9STRA) HSP 1 Score: 223 bits (567), Expect = 2.470e-70 Identity = 113/193 (58.55%), Postives = 135/193 (69.95%), Query Frame = 1
Query: 1 AEAAPLIERLGLVEEPGRFPTAAPSKCFSGRYKEAAVSAVVNGKCSRFKVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFKKHDTSIGDVFISSRVRNHDRRIPIPGFKEFGVGDHESHPTPSMVKELGYKEGVVSTGSSFDSTDMDNKMMEENDARVKDMEAAAVAWACEQHN-TPMFCIKVVTDLVDG 576
AEA PLI+ L L + FP +AP KC++ + V NGKC R VD +GTVA GL+ WLS+E KPDLVINAGTAGGF + +IGDVF+SSR NHDRRI IPG+ E+GVG ++ PT + LGYK GVV+T +S D + D K M N+A VKDME AAVAWACEQHN TP FCIKVVTD+VDG
Sbjct: 3 AEAQPLIDHLKLELDEAAFPASAPCKCYTSERNGYTMHVVTNGKCRRHGVDHVGTVAGGLAAWLSIEKFKPDLVINAGTAGGFNRMGAAIGDVFVSSRTVNHDRRIAIPGWTEWGVGKTDAVPTEQLRGALGYKHGVVTTSNSLDFIEEDAKHMLANEASVKDMEGAAVAWACEQHNNTPFFCIKVVTDIVDG 195
BLAST of mRNA_H-elongata_contig7893.15557.1 vs. uniprot
Match: A0A7S0S4A1_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S4A1_9CHLO) HSP 1 Score: 205 bits (522), Expect = 3.880e-63 Identity = 104/194 (53.61%), Postives = 135/194 (69.59%), Query Frame = 1
Query: 1 AEAAPLIERLGLV-EEPGRFPTAAPSKCFSGRYKEAAVSAVVNGKCSRFKVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFKKHDTSIGDVFISSRVRNHDRRIPIPGFKEFGVGDHESHPTPSMVKELGYKEGVVSTGSSFDSTDMDNKMMEENDARVKDMEAAAVAWACEQHNTPMFCIKVVTDLVDGG 579
AEA PLI RLGLV ++P + AP +SG AV V NG+C VD +GTV A LST+L+V+ KPDLVI+AGTAGGFK SIGD+F+S+ V NHDRRIP+P F ++G+G + PTP+MV LG K GVV++G+S D TD +M+E++A VK+MEAAA+AW TP+ C+K VTD+VDGG
Sbjct: 31 AEAQPLITRLGLVKDDPPKVLQPAPCVTYSGSLGSLAVHVVWNGRCGTHGVDNVGTVPAALSTYLAVQAFKPDLVISAGTAGGFKSQGASIGDIFVSTHVVNHDRRIPLPSFDQYGLGKASTLPTPNMVTSLGLKTGVVTSGNSLDYTDKCMDIMKEHEAAVKEMEAAAIAWVTALFGTPLVCVKAVTDIVDGG 224
BLAST of mRNA_H-elongata_contig7893.15557.1 vs. uniprot
Match: W7TST5_9STRA (Nucleoside phosphorylase domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TST5_9STRA) HSP 1 Score: 202 bits (515), Expect = 5.830e-62 Identity = 102/191 (53.40%), Postives = 135/191 (70.68%), Query Frame = 1
Query: 4 EAAPLIERLGLVEEPGRFPTAAPSKCFSGRYKEAAVSAVVNGKCSRFKVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFKKHDTSIGDVFISSRVRNHDRRIPIPGFKEFGVGDHESHPTPSMVKELGYKEGVVSTGSSFDSTDMDNKMMEENDARVKDMEAAAVAWACEQHNTPMFCIKVVTDLVDG 576
EA PLI +LGL ++ F AAP CF+G Y ++ V NGK +F D +GTV A L+T+L+VE LKPDL+INAGTAGGF+ +IGDV ISS + NHDRR+ +P F ++GV +H++ TP + + L +K GVVSTG+S D + D+ +M NDA VKDMEAAAVAWA E ++ P F +KVVTD+VDG
Sbjct: 42 EAMPLITKLGLTQQSNYFGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAALATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDG 232
BLAST of mRNA_H-elongata_contig7893.15557.1 vs. uniprot
Match: A0A7S2V4K5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4K5_9STRA) HSP 1 Score: 201 bits (512), Expect = 1.760e-61 Identity = 107/206 (51.94%), Postives = 135/206 (65.53%), Query Frame = 1
Query: 1 AEAAPLIERLGLV-------EEPGRFPTAA-------PSKCFSGRYKEAAVSAVVNGKCSRFKVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFKKHDTSIGDVFISSRVRNHDRRIPIPGFKEFGVGDHESHPTPSMVKELGYKEGVVSTGSSFDSTDMDNKMMEENDARVKDMEAAAVAWACEQHNTPMFCIKVVTDLVDG 576
AEAAPL+E LGL E G +A P+ + G E + V NGK ++ VD +GTV AGL T+LS+ + PD+VINAGT GGF +GDVFISS +NHDRRI IPGF E+G+GD+ + PTP++VKELGYK GVV+TG+S D D+++M NDA VKDME AA+A E +NTP F +KVVTDLVDG
Sbjct: 29 AEAAPLVEHLGLTKCECNGDESNGDGGQSANILSGPMPAVVYEGEVNECKIFVVTNGKDPKYGVDNVGTVCAGLVTYLSLLAISPDIVINAGTCGGFISKGAQVGDVFISSAFKNHDRRIAIPGFSEWGIGDYAAVPTPNLVKELGYKTGVVTTGNSLDHVPKDDEIMAANDASVKDMEGAAIAAVAEMYNTPCFGVKVVTDLVDG 234
BLAST of mRNA_H-elongata_contig7893.15557.1 vs. uniprot
Match: A0A1D1ZX64_AUXPR (PNP_UDP_1 domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZX64_AUXPR) HSP 1 Score: 199 bits (505), Expect = 2.400e-60 Identity = 99/193 (51.30%), Postives = 132/193 (68.39%), Query Frame = 1
Query: 1 AEAAPLIERLGLVEEPGR-FPTAAPSKCFSGRYKEAAVSAVVNGKCSRFKVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFKKHDTSIGDVFISSRVRNHDRRIPIPGFKEFGVGDHESHPTPSMVKELGYKEGVVSTGSSFDSTDMDNKMMEENDARVKDMEAAAVAWACEQHNTPMFCIKVVTDLVDG 576
AEAAPLI+ LGLV++ R P AP FSG + A V VVNGKC + VD +GTV A L+ +L+++ PDLVI+ GTAGGF +IGDVF+S+ NHDRRIPIPGF ++G+G H + PTP + LG K G+VS+G+S D + D ++M E+D VK+MEAAA+AW+ PMF +K +TD+VDG
Sbjct: 48 AEAAPLIQALGLVQDTPRVIPEPAPCVSFSGSHAGAHVHVVVNGKCGKHGVDNVGTVPAALTAYLALQAFDPDLVISTGTAGGFGAQGAAIGDVFLSTATVNHDRRIPIPGFDQYGLGLHAALPTPQLQAALGLKAGLVSSGNSLDYVERDMEIMREHDTSVKEMEAAAIAWSASLFGVPMFSVKAITDIVDG 240
BLAST of mRNA_H-elongata_contig7893.15557.1 vs. uniprot
Match: A0A6S9GE08_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GE08_HETAK) HSP 1 Score: 193 bits (491), Expect = 1.670e-58 Identity = 99/192 (51.56%), Postives = 129/192 (67.19%), Query Frame = 1
Query: 1 AEAAPLIERLGLVEEPGRFPTAAPSKCFSGRYKEAAVSAVVNGKCSRFKVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFKKHDTSIGDVFISSRVRNHDRRIPIPGFKEFGVGDHESHPTPSMVKELGYKEGVVSTGSSFDSTDMDNKMMEENDARVKDMEAAAVAWACEQHNTPMFCIKVVTDLVDG 576
AEA PLI+ LGL E+ F P+KCFSG V VVNG+ +F D +GTV A L+T+ ++TL PDL+INAGTAGGF++ IGD+F+S+ +NHDRRI IP F E+ G +E T +M KELG+K G+V+TG+S D D+++M ENDA VKDMEAAA+A TP F +K VTD+VDG
Sbjct: 27 AEAQPLIDCLGLTEQSSVFSGPLPAKCFSGLVDGCNVDVVVNGQDPKFGNDSVGTVCAALTTYEGLKTLSPDLLINAGTAGGFRRKGAEIGDIFLSTECKNHDRRIAIPSFTEWATGAYECVSTANMQKELGFKCGIVTTGNSLDHEPKDDELMLENDASVKDMEAAAIASTAALFETPFFAVKSVTDIVDG 218
BLAST of mRNA_H-elongata_contig7893.15557.1 vs. uniprot
Match: A0A087SFB9_AUXPR (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SFB9_AUXPR) HSP 1 Score: 193 bits (491), Expect = 2.450e-58 Identity = 100/207 (48.31%), Postives = 137/207 (66.18%), Query Frame = 1
Query: 1 AEAAPLIERLGLVEEPGR-FPTAAPSKCFSGRYKEAAVSAVVNGKCSRFKVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFKKHDTSIGDVFISSRVRNHDRRIPIPGFKEFGVGDHESHPTPSMVKELGYKEGVVSTGSSFDSTDMDNKMMEENDARVKDMEAAAVAWACEQHNTPMFCIKVVTDLVDG-GGVGQVSAPLRQV 615
AEAAPLI+ LGLV++ R P AP FSG + A V VVNGKC + VD +GTV A L+ +L+++ PDLVI+ GTAGGF +IGDVF+S+ NHDRRIPIPGF ++G+G H + PTP + LG K G+VS+G+S D + D ++M E+D VK+MEAAA+AW+ PMF +K +TD+ + + +A L+QV
Sbjct: 48 AEAAPLIQALGLVQDTPRVIPEPAPCVSFSGSHAGAHVHVVVNGKCGKHGVDNVGTVPAALTAYLALQAFDPDLVISTGTAGGFGAQGAAIGDVFLSTATVNHDRRIPIPGFDQYGLGLHAALPTPQLQAALGLKAGLVSSGNSLDYVERDMEIMREHDTSVKEMEAAAIAWSASLFGVPMFSVKAITDIDEFLENLATAAASLQQV 254
BLAST of mRNA_H-elongata_contig7893.15557.1 vs. uniprot
Match: A0A7S0Y7R1_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0Y7R1_9CHLO) HSP 1 Score: 192 bits (487), Expect = 6.500e-58 Identity = 100/201 (49.75%), Postives = 133/201 (66.17%), Query Frame = 1
Query: 1 AEAAPLIERLGLV-EEPGRFPTAAPSKCFSGRYKEAAVSAVVNGKCSRFKVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFKKHDTSIGDVFISSRVRNHDRRIPIPGFKEFGVGDHESHPTPSMVKELGYKEGVVSTGSSFDSTDMDNKMMEENDARVKDMEAAAVAWAC----EQHNT---PMFCIKVVTDLVDGG 579
AEA P I+ LGL+ +EP + P P+ FSG Y+ V V NGK F VD +GTV A L+++L+++ L PD+VI+AGTAGGFK +IGDVF+ + V NHDRRIPIPGF +G+G PTP + LG KEGV+S+G+S D TD K+ME +K+ME+AA+AW+C + T P+ CIK VTD+VDGG
Sbjct: 19 AEATPFIQALGLIKDEPSKLPGPIPAVSFSGDYEGLKVHVVWNGKDPLFGVDNVGTVPASLTSYLAIQALHPDIVISAGTAGGFKSKTAAIGDVFLGTHVVNHDRRIPIPGFDAYGIGRQLCLPTPQLRAALGLKEGVISSGNSLDYTDSCLKIMEAEGVAIKEMESAAIAWSCRLFVDASGTTPLPLICIKAVTDIVDGG 219 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7893.15557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7893.15557.1 >prot_H-elongata_contig7893.15557.1 ID=prot_H-elongata_contig7893.15557.1|Name=mRNA_H-elongata_contig7893.15557.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp AEAAPLIERLGLVEEPGRFPTAAPSKCFSGRYKEAAVSAVVNGKCSRFKVback to top mRNA from alignment at H-elongata_contig7893:4888..7304+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7893.15557.1 ID=mRNA_H-elongata_contig7893.15557.1|Name=mRNA_H-elongata_contig7893.15557.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2417bp|location=Sequence derived from alignment at H-elongata_contig7893:4888..7304+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7893:4888..7304+ >mRNA_H-elongata_contig7893.15557.1 ID=mRNA_H-elongata_contig7893.15557.1|Name=mRNA_H-elongata_contig7893.15557.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1236bp|location=Sequence derived from alignment at H-elongata_contig7893:4888..7304+ (Himanthalia elongata Himel1 dioecious)back to top |