mRNA_H-elongata_contig78829.15551.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig78829.15551.1
Unique NamemRNA_H-elongata_contig78829.15551.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5L5J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J5_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 1.370e-34
Identity = 85/218 (38.99%), Postives = 113/218 (51.83%), Query Frame = 1
Query:    7 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGI-DPKC---WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 645
            D FVYLG  IS+ G+   EI  R+  AW CF + S ++YD P      K+R L+ EV+E +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY + L++  CE  IE  V KR L +AG V RM D RLP   +   M GG   RG+       R+ E    F + D K    W  +A++   WY +VE GA  FM  W  + A
Sbjct:  119 DRFVYLGRAISADGKADREITSRSCRAWKCFRRNSASMYDRPRANRPLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMKDSRLPKRMLLGAMAGGVGYRGRQESDWVSRLGEDLVAFNMRDEKQGGKWRESAKDPQVWYNKVEYGASWFMRKWHRQEA 333          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5L5T8_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T8_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 4.030e-34
Identity = 82/218 (37.61%), Postives = 114/218 (52.29%), Query Frame = 1
Query:    7 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 645
            D FVYLG TIS+ G+   EI  R+  AW C+ + S ++YD        K+R L+ EV+E +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY + L++  CE  IE  V KR L +AG V RM D+RLP   +   M GG   RG       +R+ E    FG+  +     W  +A++   WY ++E GA  FM  W  + A
Sbjct:  169 DRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQESDWVYRLGEDLVAFGMKEEKEGGRWKESAKDQEAWYDKIEDGAAWFMRKWHRQEA 383          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5JCS2_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS2_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 5.320e-33
Identity = 81/218 (37.16%), Postives = 111/218 (50.92%), Query Frame = 1
Query:    7 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 645
            D FVYLG  IS+ G+   EI  R+  AW C+ + S ++YD        K+R L+ EV+E +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY + L++  CE  IE  V KR L +AG V RM D RLP   +   M GG   RG        R+ EY   F +  +     W  +A+++  WY +VE  A  FM  W  + A
Sbjct:   68 DRFVYLGRIISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQGSDWVSRLGEYLVAFNMGDEKEGGKWKESAKDSEVWYNKVEDVAAWFMRKWHRQEA 282          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5L020_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L020_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 5.570e-33
Identity = 86/218 (39.45%), Postives = 111/218 (50.92%), Query Frame = 1
Query:    7 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGI-DPKC---WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 645
            D FVYLG TIS+ G+V  EI  RT  AW C+ + S ++YD        K+R L+ EV+E +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY + L++  CE  IE  V KR L + G V RM D RLP   +   M GG   RG        R+ E    F I D K    W  +A++   WY  VE GA  FM  W  + A
Sbjct:  556 DRFVYLGRTISADGKVDREITSRTCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFVGFVVRMEDSRLPKRMLSGAMAGGVGYRGGQESDWVSRLGEDLVAFNIGDEKGAGKWKESAKDPEVWYNNVEDGAAWFMRKWHRQEA 770          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5JZD4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZD4_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 8.300e-33
Identity = 83/218 (38.07%), Postives = 112/218 (51.38%), Query Frame = 1
Query:    7 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 645
            D FVYLG TIS+ G+   EI  R+  AW C+ + S ++YD        K+R L+ EV+E +LYGC +W+L+   + KL E HR  L RC+    S R   D   LSY + L++  CE  IE  V KR L +AG V RM D+RLP   +   M GG   RG        R+ E    F +  +     W   A++   WY +VE GA  FM  W  + A
Sbjct:  413 DRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTTEHYAKLNETHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGAKWKECAKDPEVWYNKVEDGAAWFMRKWHRQEA 627          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5KU62_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU62_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.630e-32
Identity = 81/218 (37.16%), Postives = 111/218 (50.92%), Query Frame = 1
Query:    7 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 645
            D FVYLG TIS+ G+   EI  R+  AW C+ + S ++YD        K+R L+ EV+E +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY + L++  CE  IE  V +R L + G V RM D RLP   +   M GG   RG        R+ E    F +  +     W  +A+N+  WY +VE GA  FM  W  + A
Sbjct:  215 DRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRANRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRQRRLCFGGFVMRMEDSRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKWHRQEA 429          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5JTX2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX2_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.630e-32
Identity = 82/218 (37.61%), Postives = 111/218 (50.92%), Query Frame = 1
Query:    7 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 645
            D FVYLG TIS+ G+   EI  R+  AW C+ +    +YD        K+R L+ +V+E +LYGC +W+L+   + KL   HR  L RC++   S R   D   LSY E L++  CE  IE  V KR L +AG V RM D RLP   +   M GG   RG        R+ E    F +  +     W  +A+N+  WY +VE GA  FM  W  + A
Sbjct:  200 DRFVYLGRTISADGKADLEITSRSCRAWKCYRRNRALMYDRRRANRQLKIRLLQVQVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCID--WSKRKRSD-RPLSYAEALIQAGCEQTIEATVRKRRLCFAGFVMRMEDSRLPKRILIGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKWHRQEA 414          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5JGD8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGD8_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 3.550e-32
Identity = 81/218 (37.16%), Postives = 113/218 (51.83%), Query Frame = 1
Query:    7 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 645
            D FVYLG TIS+ G+   EI  R+  AW C+ + S ++YD        K+R L+ +V++ +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY + L++  CE  IE  V KR L +AG V RM D+RLP   +   M GG   RG        R+ E    F +  +     W  +A+N+  WY +VE GA  FM  W  + A
Sbjct:  518 DRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRANRQLKIRLLQAKVVDTLLYGCASWSLTAKHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQALIQAGCEETIEATVRKRSLCFAGFVMRMEDNRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGGKWKESAKNSEVWYNKVEDGAAWFMRKWHRQEA 732          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5K065_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K065_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 6.740e-32
Identity = 81/218 (37.16%), Postives = 113/218 (51.83%), Query Frame = 1
Query:    7 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 645
            D FVYLG TIS+ G+   EI  R+  AW C+ + S ++YD        K+R L+ EV+E +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY + L++  CE  IE  V KR L +AG V RM D+RLP   +   M GG   RG        R+ E    F +  +     W  +A++   WY +VE GA +F+  W  + A
Sbjct:  581 DRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTVEHYTKLNGTHRQFLTRCIG--WSKRQRSD-RPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGVGYRGGQESDWVSRLGEDLVAFNMGDEKEGDKWKESAKDPEVWYNKVEDGAALFVRKWHRQEA 795          
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Match: A0A6H5KG97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG97_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 1.550e-31
Identity = 79/218 (36.24%), Postives = 108/218 (49.54%), Query Frame = 1
Query:    7 DTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVADKVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRAAPDYHMLSYLEVLLRTDCE-CIEVAVMKRILRYAGRVARMHDDRLPNIAMRSEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKC----WMWAAQNAHDWYRQVETGAEVFMSAWSTKRA 645
            D FVYLG TIS+ G+   EI  R+  AW C+ + S ++YD        K+R L+ EV+E +LYGC +W+L+   + KL   HR  L RC+    S R   D   LSY +VL++  CE  IE    KR L + G V RM D RLP   +   M GG   RG        R+ E    F +  +     W  + ++   WY +VE GA   M  W  + A
Sbjct:   85 DRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRANRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIG--WSKRKRSD-RPLSYAQVLIQAGCEETIEATARKRRLCFVGFVMRMEDSRLPKRMLSGAMAGGAGYRGGQESDWVSRLGEDLVAFNMGAEKEGGKWKESVKDPEVWYSKVENGAAWLMRKWHRQEA 299          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78829.15551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5J5_9PHAE1.370e-3438.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5T8_9PHAE4.030e-3437.61Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCS2_9PHAE5.320e-3337.16Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L020_9PHAE5.570e-3339.45Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JZD4_9PHAE8.300e-3338.07Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KU62_9PHAE1.630e-3237.16Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JTX2_9PHAE1.630e-3237.61Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JGD8_9PHAE3.550e-3237.16Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K065_9PHAE6.740e-3237.16Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KG97_9PHAE1.550e-3136.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78829contigH-elongata_contig78829:1590..2249 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score104.4
Seed ortholog evalue7e-20
Seed eggNOG ortholog13616.ENSMODP00000040692
EggNOG free text desc.Ribonuclease H protein
EggNOG OGs3A35Z@33154,3BQYF@33208,3D7GC@33213,48EZY@7711,49BMJ@7742,KOG1075@1,KOG1075@2759
COG Functional cat.S
Best tax levelVertebrata
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size660
Cds size660
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931193.2633953-CDS-H-elongata_contig78829:1589..22491622931193.2633953-CDS-H-elongata_contig78829:1589..2249Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig78829 1590..2249 -
1691679736.1305065-CDS-H-elongata_contig78829:1589..22491691679736.1305065-CDS-H-elongata_contig78829:1589..2249Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig78829 1590..2249 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78829.15551.1prot_H-elongata_contig78829.15551.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig78829 1590..2249 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig78829.15551.1

>prot_H-elongata_contig78829.15551.1 ID=prot_H-elongata_contig78829.15551.1|Name=mRNA_H-elongata_contig78829.15551.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=220bp
NIDTFVYLGSTISSAGEVGPEIKRRTGYAWNCFFKYSKAVYDNPYIAVAD
KVRFLKTEVLEVMLYGCLTWTLSPGDFDKLREAHRGMLLRCLNAYTSTRA
APDYHMLSYLEVLLRTDCECIEVAVMKRILRYAGRVARMHDDRLPNIAMR
SEMFGGKRKRGQPVKRLEHRVTEYCTVFGIDPKCWMWAAQNAHDWYRQVE
TGAEVFMSAWSTKRANETNA
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mRNA from alignment at H-elongata_contig78829:1590..2249-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig78829.15551.1 ID=mRNA_H-elongata_contig78829.15551.1|Name=mRNA_H-elongata_contig78829.15551.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=660bp|location=Sequence derived from alignment at H-elongata_contig78829:1590..2249- (Himanthalia elongata Himel1 dioecious)
AACATCGACACCTTCGTGTATCTCGGCAGCACCATCAGCAGCGCTGGGGA AGTCGGCCCTGAGATCAAACGCCGTACTGGCTACGCCTGGAACTGCTTCT TCAAGTACAGCAAGGCGGTGTATGACAACCCATACATCGCAGTGGCAGAT AAGGTCCGTTTCCTGAAGACGGAAGTACTCGAGGTCATGCTCTATGGTTG TCTAACCTGGACTCTTTCACCCGGCGACTTCGACAAGCTGCGGGAAGCCC ACCGTGGAATGCTGCTGAGGTGTCTCAATGCCTACACCTCGACCCGGGCC GCCCCTGACTACCACATGCTCTCATACCTCGAGGTCCTCCTCAGGACTGA CTGTGAGTGCATTGAGGTTGCTGTGATGAAGCGCATCCTCCGCTACGCCG GCCGCGTCGCGCGAATGCACGACGATCGTCTCCCCAACATCGCCATGCGT AGCGAAATGTTCGGAGGGAAGAGAAAACGGGGCCAGCCTGTGAAACGCCT CGAACACCGTGTCACGGAATACTGCACTGTCTTCGGGATCGACCCCAAGT GTTGGATGTGGGCCGCCCAAAATGCACATGACTGGTACCGTCAAGTAGAG ACGGGAGCTGAAGTCTTCATGTCGGCCTGGTCCACCAAGCGTGCAAACGA GACCAACGCC
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Coding sequence (CDS) from alignment at H-elongata_contig78829:1590..2249-

>mRNA_H-elongata_contig78829.15551.1 ID=mRNA_H-elongata_contig78829.15551.1|Name=mRNA_H-elongata_contig78829.15551.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1320bp|location=Sequence derived from alignment at H-elongata_contig78829:1590..2249- (Himanthalia elongata Himel1 dioecious)
AACATCGACACCTTCGTGTATCTCGGCAGCACCATCAGCAGCGCTGGGGA
AGTCGGCCCTGAGATCAAACGCCGTACTGGCTACGCCTGGAACTGCTTCT
TCAAGTACAGCAAGGCGGTGTATGACAACCCATACATCGCAGTGGCAGAT
AAGGTCCGTTTCCTGAAGACGGAAGTACTCGAGGTCATGCTCTATGGTTG
TCTAACCTGGACTCTTTCACCCGGCGACTTCGACAAGCTGCGGGAAGCCC
ACCGTGGAATGCTGCTGAGGTGTCTCAATGCCTACACCTCGACCCGGGCC
GCCCCTGACTACCACATGCTCTCATACCTCGAGGTCCTCCTCAGGACTGA
CTGTGAGTGCATTGAGGTTGCTGTGATGAAGCGCATCCTCCGCTACGCCG
GCCGCGTCGCGCGAATGCACGACGATCGTCTCCCCAACATCGCCATGCGT
AGCGAAATGTTCGGAGGGAAGAGAAAACGGGGCCAGCCTGTGAAACGCCT
CGAACACCGTGTCACGGAATACTGCACTGTCTTCGGGATCGACCCCAAGT
GTTGGATGTGGGCCGCCCAAAATGCACATGACTGGTACCGTCAAGTAGAG
ACGGGAGCTGAAGTCTTCATGTCGGCCTGGTCCACCAAGCGTGCAAACGA
GACCAACGCCAACATCGACACCTTCGTGTATCTCGGCAGCACCATCAGCA
GCGCTGGGGAAGTCGGCCCTGAGATCAAACGCCGTACTGGCTACGCCTGG
AACTGCTTCTTCAAGTACAGCAAGGCGGTGTATGACAACCCATACATCGC
AGTGGCAGATAAGGTCCGTTTCCTGAAGACGGAAGTACTCGAGGTCATGC
TCTATGGTTGTCTAACCTGGACTCTTTCACCCGGCGACTTCGACAAGCTG
CGGGAAGCCCACCGTGGAATGCTGCTGAGGTGTCTCAATGCCTACACCTC
GACCCGGGCCGCCCCTGACTACCACATGCTCTCATACCTCGAGGTCCTCC
TCAGGACTGACTGTGAGTGCATTGAGGTTGCTGTGATGAAGCGCATCCTC
CGCTACGCCGGCCGCGTCGCGCGAATGCACGACGATCGTCTCCCCAACAT
CGCCATGCGTAGCGAAATGTTCGGAGGGAAGAGAAAACGGGGCCAGCCTG
TGAAACGCCTCGAACACCGTGTCACGGAATACTGCACTGTCTTCGGGATC
GACCCCAAGTGTTGGATGTGGGCCGCCCAAAATGCACATGACTGGTACCG
TCAAGTAGAGACGGGAGCTGAAGTCTTCATGTCGGCCTGGTCCACCAAGC
GTGCAAACGAGACCAACGCC
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