mRNA_H-elongata_contig786.15533.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig786.15533.1
Unique NamemRNA_H-elongata_contig786.15533.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: D7G583_ECTSI (Acetylornithine transaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G583_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 6.270e-73
Identity = 138/237 (58.23%), Postives = 153/237 (64.56%), Query Frame = 2
Query:    2 TGIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAANCADS------GALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALAKVT 694
            TG+GRTGK+WGY+N  VEPDV+T AK                                                            ALGGGVPIGAMLC +R D F+PGNHASTFGGNPLACAAANC  S      GALL NVR+RGEQLRAGL  L+ KYPET+AG+RGWGLINGLVL ++SPVLAG VVAETT LGLLLVPAGLKVVRFVPPL+AT AEVSTAL++ DQALA VT
Sbjct:  299 TGMGRTGKVWGYQNFDVEPDVVTCAK------------------------------------------------------------ALGGGVPIGAMLCKERADVFEPGNHASTFGGNPLACAAANCVTSKLSENGGALLENVRERGEQLRAGLAELQEKYPETVAGVRGWGLINGLVLNEESPVLAGAVVAETTKLGLLLVPAGLKVVRFVPPLVATAAEVSTALSVIDQALAIVT 475          
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: A0A835ZAE5_9STRA (Acetylornithine transaminase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE5_9STRA)

HSP 1 Score: 197 bits (501), Expect = 9.350e-54
Identity = 116/232 (50.00%), Postives = 135/232 (58.19%), Query Frame = 2
Query:    2 TGIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAA----ANCADSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALA 685
            TG+GRTG IWG+ENLGVEPD  ++AK                                                            ALG GVPIGAM+C  + D FKPG+HASTFGGNPLACAA    AN   SG LLTNV+ RGEQLRAGL+RL  KYP+ +   RGWGLINGLV++D+  +LAG VVA  T  GLLLVPAGLKVVR+VPPL  +EAE+  ALA  D A+A
Sbjct:  297 TGMGRTGTIWGFENLGVEPDTFSSAK------------------------------------------------------------ALGAGVPIGAMMCKAKCDVFKPGDHASTFGGNPLACAAGLVIANRISSGGLLTNVKARGEQLRAGLDRLLAKYPDHLKSKRGWGLINGLVIKDEVELLAGQVVAAATDGGLLLVPAGLKVVRYVPPLTVSEAEIDDALAKTDVAIA 468          
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: A0A0M1JZR9_9CYAN (Acetylornithine aminotransferase n=2 Tax=unclassified Planktothricoides TaxID=2621081 RepID=A0A0M1JZR9_9CYAN)

HSP 1 Score: 185 bits (469), Expect = 1.160e-49
Identity = 102/233 (43.78%), Postives = 131/233 (56.22%), Query Frame = 2
Query:    5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAA----NCADSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALAKV 691
            G+GR+GK+WGYENLG+EPD+ T+AK                                                             LGGG+PIGA+LC    D FKPG+HASTFGGNP ACA A    +  +S  LL NV+DRG+QLR GL+ +  KYP  +  +RGWGLINGL L+ DSP+ + D+V    + GLLLVPAG KVVRFVPPLI + AE+  AL +F+ A+A++
Sbjct:  252 GMGRSGKLWGYENLGIEPDIFTSAK------------------------------------------------------------GLGGGIPIGALLCKSHCDVFKPGDHASTFGGNPFACAVALAVCHTLESENLLANVQDRGQQLRQGLQAIAAKYPTLVEEVRGWGLINGLELKADSPIASTDLVKAAISQGLLLVPAGPKVVRFVPPLIVSAAEIDRALQLFESAIAQL 424          
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: UPI0020205C7A (aspartate aminotransferase family protein n=1 Tax=Chroococcidiopsis sp. CCMEE 29 TaxID=155894 RepID=UPI0020205C7A)

HSP 1 Score: 184 bits (467), Expect = 2.350e-49
Identity = 102/233 (43.78%), Postives = 127/233 (54.51%), Query Frame = 2
Query:    5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAANCA----DSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALAKV 691
            G+GR+GK WGYENLG+EPD+ T+AK                                                             LGGG+PIGA++C    D F+PG+HASTFGGNP ACAAA C     +   +L NV++RGEQLR GL  +  KYP  +A +RGWGLING+ L  DS   + D+V    A GLLLVPAG KV+RFVPPL+ TEAEV  AL   ++A+AKV
Sbjct:  253 GVGRSGKFWGYENLGIEPDIFTSAK------------------------------------------------------------GLGGGIPIGAVMCKKFCDVFQPGDHASTFGGNPFACAAALCVCETIERDNILQNVQERGEQLRTGLSAIAAKYPNAVAEVRGWGLINGMELNPDSQTTSSDIVKAAIAEGLLLVPAGPKVIRFVPPLVVTEAEVDQALQAVERAMAKV 425          
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: A0A2T1EC45_9CHRO (Acetylornithine aminotransferase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A2T1EC45_9CHRO)

HSP 1 Score: 184 bits (466), Expect = 3.130e-49
Identity = 104/230 (45.22%), Postives = 128/230 (55.65%), Query Frame = 2
Query:    5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAANCA----DSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQAL 682
            G+GRTGK+WGYENLG+EPDV T+AK                                                             LGGG+PIGA+LC    D F PG+HASTFGGNP ACAAA C     +  +LL NV +RGEQLR GL+ L  KY   +A +RGWGLING+ L  + P+ +GDVV    + GLLLVPAG KV+RFVPPLI +E+EV+TAL   +QA+
Sbjct:  252 GVGRTGKLWGYENLGIEPDVFTSAK------------------------------------------------------------GLGGGIPIGAVLCKSFCDVFTPGDHASTFGGNPFACAAALCVLETIEGDSLLQNVIERGEQLRTGLQALAAKYSNIVAEVRGWGLINGMELAQNIPLTSGDVVKAAMSEGLLLVPAGPKVIRFVPPLIVSESEVNTALQAVEQAM 421          
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: A0A1C0V3M6_9CYAN (Acetylornithine aminotransferase n=4 Tax=Limnothrix TaxID=132605 RepID=A0A1C0V3M6_9CYAN)

HSP 1 Score: 183 bits (464), Expect = 5.560e-49
Identity = 106/231 (45.89%), Postives = 132/231 (57.14%), Query Frame = 2
Query:    5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLAC--AAANCADSGA--LLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALA 685
            G+GRTG++WGYENLG+EPD+ T+AK                                                             LGGG+PIGA+LC  + + F+PG+HAST+GGNP AC  A A C   GA   L NVRDRGEQLRAGL+ L ++YP  IA +RGWGLINGLVL++D+ + + D+V    A GLLLVPAG +VVRFVPPLI T AE+  ALA   QA+A
Sbjct:  246 GVGRTGQLWGYENLGIEPDIFTSAK------------------------------------------------------------GLGGGIPIGALLCKAKCNVFEPGDHASTYGGNPFACGVAMAVCQTVGAPGFLDNVRDRGEQLRAGLKALAVQYPNLIAEVRGWGLINGLVLKEDAGLSSIDLVKTAMAAGLLLVPAGPQVVRFVPPLIVTAAEIDEALAAITQAIA 416          
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: UPI0016870BB9 (aspartate aminotransferase family protein n=1 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI0016870BB9)

HSP 1 Score: 181 bits (459), Expect = 2.080e-48
Identity = 105/233 (45.06%), Postives = 126/233 (54.08%), Query Frame = 2
Query:    5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAA----NCADSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALAKV 691
            G+GRTG +WGYE LG+EPD+ T+AK                                                             LGGG+PIGAMLC    D F PG+HASTFGGNP ACA A       +   LL NV+ RGEQLR GLE +  KYP  I+ +RGWGLINGLVL  ++ V +  +V    A GLLLVPAGLKVVRFVPPLI TEAE+  ALA+ D+ LA++
Sbjct:  234 GMGRTGHLWGYEALGIEPDIFTSAK------------------------------------------------------------GLGGGIPIGAMLCKSSCDVFAPGDHASTFGGNPFACAVALAVCQTLEQNRLLQNVQARGEQLRQGLEAIAPKYPNLISQVRGWGLINGLVLNAENEVNSAAIVKAAMAEGLLLVPAGLKVVRFVPPLIVTEAEIDRALAVIDRVLAEL 406          
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: A0A139X6P8_9CYAN (Acetylornithine aminotransferase n=5 Tax=Nostocales TaxID=1161 RepID=A0A139X6P8_9CYAN)

HSP 1 Score: 180 bits (456), Expect = 7.740e-48
Identity = 105/235 (44.68%), Postives = 124/235 (52.77%), Query Frame = 2
Query:    5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAA----NCADSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALAKVTR 697
            G+GRTG+ WGYE LGVEPD+ T+AK                                                             LGGG+PIGAM+C    D F+PG HASTFGGNP AC  A       +   ++ NVR+RGEQLRAGL  +  KYP  I  +RGWGLI+G+ L  D    A DVV  T   GLLLVPAG KVVRFVPPLI TEAE++TAL   D+A+A VTR
Sbjct:  246 GMGRTGEFWGYEYLGVEPDIFTSAK------------------------------------------------------------GLGGGIPIGAMMCKSSCDVFQPGEHASTFGGNPFACGVALAVCQTLEQENIVQNVRERGEQLRAGLRAIAAKYPNQIIDVRGWGLIDGMELSADISTTAADVVKATIDEGLLLVPAGPKVVRFVPPLIVTEAEINTALQAVDKAMATVTR 420          
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: UPI0019F2992D (Aspartate aminotransferase family protein n=1 Tax=Synechococcales cyanobacterium M55_K2018_004 TaxID=2774347 RepID=UPI0019F2992D)

HSP 1 Score: 179 bits (455), Expect = 1.010e-47
Identity = 106/231 (45.89%), Postives = 123/231 (53.25%), Query Frame = 2
Query:    5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAA----NCADSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQALA 685
            G+GRTGK+WGYENLG+EPD+ T+AK                                                             LGGG+PIGAMLC    D FKPG+HASTFGGNP AC  A       D   LL N R RGEQLR GL  +  KYP  IA +RGWGLINGLVL ++  + A +VV    A GLLLVPAG KVVRFVPPLI T  EV  A+A+ ++ALA
Sbjct:  247 GMGRTGKLWGYENLGIEPDIFTSAK------------------------------------------------------------GLGGGIPIGAMLCKSFCDVFKPGDHASTFGGNPFACGVALTVCQTLDREHLLENARARGEQLRQGLRAITQKYPNLIAEVRGWGLINGLVLREEVELTAPEVVKRAIAEGLLLVPAGPKVVRFVPPLIVTADEVEAAIAMVERALA 417          
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Match: UPI001CA6965D (aspartate aminotransferase family protein n=1 Tax=Leptothermofonsia sichuanensis TaxID=2917832 RepID=UPI001CA6965D)

HSP 1 Score: 179 bits (453), Expect = 1.030e-47
Identity = 103/229 (44.98%), Postives = 124/229 (54.15%), Query Frame = 2
Query:    5 GIGRTGKIWGYENLGVEPDVITTAKVRRWIGTERLP*DTHLIYYLLYITLYIKI*IANLFCPSIFFRNAGSTYTTPCTNRVNLTQALGGGVPIGAMLCNDRGDCFKPGNHASTFGGNPLACAAA----NCADSGALLTNVRDRGEQLRAGLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLVPAGLKVVRFVPPLIATEAEVSTALAIFDQA 679
            G+GR+G +WGYENLG+EPD+ T+AK                                                             LGGG+PIGAMLC    D F+PG HASTFGGNP ACA A       +   LLTNV++RGEQLRAGL  +  K+P+ IA +RGWGLINGL L+ DSP+ + DVV    A GLLLVPAG KVVRFVPPLI + AE+  AL   + A
Sbjct:  220 GMGRSGHLWGYENLGIEPDIFTSAK------------------------------------------------------------GLGGGIPIGAMLCKSHCDIFQPGEHASTFGGNPFACAVALSVCQTIERDQLLTNVQERGEQLRAGLRAIVEKHPDAIAEVRGWGLINGLELKADSPLTSADVVKAAIAQGLLLVPAGPKVVRFVPPLIVSAAEIEQALKAVEMA 388          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig786.15533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G583_ECTSI6.270e-7358.23Acetylornithine transaminase n=2 Tax=Ectocarpus Ta... [more]
A0A835ZAE5_9STRA9.350e-5450.00Acetylornithine transaminase n=1 Tax=Tribonema min... [more]
A0A0M1JZR9_9CYAN1.160e-4943.78Acetylornithine aminotransferase n=2 Tax=unclassif... [more]
UPI0020205C7A2.350e-4943.78aspartate aminotransferase family protein n=1 Tax=... [more]
A0A2T1EC45_9CHRO3.130e-4945.22Acetylornithine aminotransferase n=3 Tax=Cyanobact... [more]
A0A1C0V3M6_9CYAN5.560e-4945.89Acetylornithine aminotransferase n=4 Tax=Limnothri... [more]
UPI0016870BB92.080e-4845.06aspartate aminotransferase family protein n=1 Tax=... [more]
A0A139X6P8_9CYAN7.740e-4844.68Acetylornithine aminotransferase n=5 Tax=Nostocale... [more]
UPI0019F2992D1.010e-4745.89Aspartate aminotransferase family protein n=1 Tax=... [more]
UPI001CA6965D1.030e-4744.98aspartate aminotransferase family protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig786contigH-elongata_contig786:10545..13270 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score212.6
Seed ortholog evalue1.2e-52
Seed eggNOG ortholog2880.D7G583
KEGG rclassRC00006,RC00062
KEGG koko:K00818
KEGG ReactionR02283
KEGG Pathwayko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00028
EggNOG free text desc.N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
EggNOG OGsCOG4992@1,KOG1401@2759
EC2.6.1.11
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Hectar predicted targeting categoryother localisation
Exons5
Model size1483
Cds size417
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931191.3584335-UTR-H-elongata_contig786:10544..108331622931191.3584335-UTR-H-elongata_contig786:10544..10833Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig786 10545..10833 +
1691679735.3005989-UTR-H-elongata_contig786:10544..108331691679735.3005989-UTR-H-elongata_contig786:10544..10833Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig786 10545..10833 +
1622931191.4707143-UTR-H-elongata_contig786:12493..132701622931191.4707143-UTR-H-elongata_contig786:12493..13270Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig786 12494..13270 +
1691679735.3755357-UTR-H-elongata_contig786:12493..132701691679735.3755357-UTR-H-elongata_contig786:12493..13270Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig786 12494..13270 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931191.383235-CDS-H-elongata_contig786:10833..108521622931191.383235-CDS-H-elongata_contig786:10833..10852Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig786 10834..10852 +
1691679735.3147817-CDS-H-elongata_contig786:10833..108521691679735.3147817-CDS-H-elongata_contig786:10833..10852Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig786 10834..10852 +
1622931191.3988962-CDS-H-elongata_contig786:11270..113441622931191.3988962-CDS-H-elongata_contig786:11270..11344Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig786 11271..11344 +
1691679735.323302-CDS-H-elongata_contig786:11270..113441691679735.323302-CDS-H-elongata_contig786:11270..11344Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig786 11271..11344 +
1622931191.4202313-CDS-H-elongata_contig786:11545..116451622931191.4202313-CDS-H-elongata_contig786:11545..11645Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig786 11546..11645 +
1691679735.3328364-CDS-H-elongata_contig786:11545..116451691679735.3328364-CDS-H-elongata_contig786:11545..11645Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig786 11546..11645 +
1622931191.4349184-CDS-H-elongata_contig786:12072..121941622931191.4349184-CDS-H-elongata_contig786:12072..12194Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig786 12073..12194 +
1691679735.356356-CDS-H-elongata_contig786:12072..121941691679735.356356-CDS-H-elongata_contig786:12072..12194Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig786 12073..12194 +
1622931191.4508352-CDS-H-elongata_contig786:12391..124931622931191.4508352-CDS-H-elongata_contig786:12391..12493Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig786 12392..12493 +
1691679735.3663006-CDS-H-elongata_contig786:12391..124931691679735.3663006-CDS-H-elongata_contig786:12391..12493Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig786 12392..12493 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig786.15533.1prot_H-elongata_contig786.15533.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig786 10834..12493 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig786.15533.1

>prot_H-elongata_contig786.15533.1 ID=prot_H-elongata_contig786.15533.1|Name=mRNA_H-elongata_contig786.15533.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
MLCNDRGDCFKPGNHASTFGGNPLACAAANCADSGALLTNVRDRGEQLRA
GLERLRLKYPETIAGIRGWGLINGLVLEDDSPVLAGDVVAETTALGLLLV
PAGLKVVRFVPPLIATEAEVSTALAIFDQALAKVTRVT*
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mRNA from alignment at H-elongata_contig786:10545..13270+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig786.15533.1 ID=mRNA_H-elongata_contig786.15533.1|Name=mRNA_H-elongata_contig786.15533.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2726bp|location=Sequence derived from alignment at H-elongata_contig786:10545..13270+ (Himanthalia elongata Himel1 dioecious)
GACAGGCATAGGGCGCACCGGAAAGATTTGGGGCTATGAAAACTTGGGCG TAGAACCCGACGTCATCACTACCGCGAAGGTACGAAGGTGGATCGGTACG GAACGTCTGCCTTAAGATACGCACTTAATATACTATCTACTATATATTAC GCTGTACATAAAAATATGAATAGCGAACCTATTTTGCCCGTCGATATTCT TTCGGAATGCTGGGAGCACCTATACTACGCCATGTACAAACCGCGTCAAT TTGACTCAGGCGCTGGGCGGGGGCGTTCCTATTGGCGCCATGCTTTGCAA CGATCGAGGTCAGTCGCTTGCGGGTCGTAGGGGCCCTATCGCGATGCATT GCATCGTTTGACGAAACATAATATACTTGTTATGTGTGAAGGGAACTTGA AGATCGGGGGTAGTGACGGCAAACCTTAAGTTGGAGCAAACAGATCAACT CAAACTCAGAGTCAGGCGAGGTCCCCGTGGAATTATACCGCTAATTGTGT TAAAAAATGAATTACGGATTAGGAGAATTAGAGCGTTCCCGGACGAAAAA GGGAGATAGCAGGTGCACTTAATTTACTGTCTTGGTTCGTCTTGGCCGGA CCCCTTCTGTAAAGCAAGCTAATAATGTATCATATGTGACATGAAGATAA CGGTGCACTAACGGGAAATGCTTCATTCGTTCTAAATGTGTTCAATGCCA TGTCGACCCTGTAATTCAACTTGAAGGCGATTGCTTCAAGCCAGGAAATC ACGCCAGCACTTTTGGAGGCAACCCCTTAGCCTGTGCGGCCGCCAACTGT GTCACTGCCAAGCTCAATGTGAGTGCCTGGAAGACAAAAAAAAATGTATG TCCGTTGATACAGCAGGAAATGTATGGTTAGTGAATAATTCATCTTCGGT TCGGAGGAGATTGATGCGTTACCTACGACAAGCTCCTCGCTACTCGCCGC GCGAATACCACCACCCGCTCACTTGTCCGCCACACGCGCTCGATGTACTA GGCGGATAGTGGTGCCCTGCTGACGAACGTGAGGGATAGGGGAGAGCAGC TCCGCGCGGGACTGGAACGTCTTCGCCTCAAGTATCCGGAGACAATCGCT GGTGAGCGGTGGTCGTATACTTGTGAAAGGCTCGTTTCGTACATGTTGTA ATGATCGAGTCTTTAACAGTGAAGCCATAATCAGCTGCATGTATAGCTTG AGTGCTGCCCCGTCTGGTTATGCGCATGATGTGCCCGCTTTTAAAAGTAG CGTCTCAAAGTGATCGGGTCGCGCTCCTAGGCCGATTAAGACCCCCTAAG GCCTGTTCTAGCCGTAGTGACCATTCCCCGAGAGCGCTATATCGCGGGTT TCAGCACCTCCATCCTATTGATAATATTTCAGTAACTTGATCGCTTCCTT GCTGCTGGAAGCTGTGTGGCAATGCTTTAGAAATACATGTGGCGATACCT TACCCGTTTCCTACAATGTTTTATCCGTCAGTGTCGGGCCCTCTAACGCC ATTTCCCTTCCTTGTCGACGCGTCCCAGGGATTCGAGGATGGGGTCTCAT AAACGGTTTGGTCCTCGAGGATGATTCTCCAGTACTCGCGGGAGACGTTG TGGCAGAAACGACGGCGCTTGGACTCCTCCTAGTACCTGCTGGGCTCAAG GTGAAGCTCTTCAACGTTGTAGACTCACAAACAGGGTTGATTCGTGGGTG ATTTAAATATAAACACTGCTTGCTGGCAAGGCTCTTCGTAACATACACCC CTCTAGCAGTAGCCCCAGTCGGTTCGCTGTCGTCCGGGGATTTGATGCGA AACGAACGCTGTACTGTTGCTTTCTGTTTCTATTTAATTTTTTGCAGGTC GTCCGGTTCGTACCGCCTCTGATTGCCACTGAGGCGGAGGTATCCACAGC GCTCGCAATATTCGACCAAGCGCTCGCCAAGGTCACCCGCGTGACCTGAG ATTGCCGTACTTAGTTTTCATCGAAAGATGGTCGATCGCAGCCCCCGCTG TTTCCGCCCAAGTTAAGGACAATATGGATATTAATGGAGGTGGTCACTCC CCTCCCCCCCCTCCAAATAGGGACAGTCCGTAATTTGTAGGACTTTTGTG CGATAAAAATGACTTACATAGTTACATGTTCGTTATTCGGAAGAGGAATT TATATGATCGTTGAAGTTCAACGGTATGGGCCTTCGATATGCACCATTCT CACGAGGCAGGGGTTCAGGAAATACCATTAAAAAATTGCGCCCATTCGCT TTCCAGAAGTAATGTACTGATGTACAATAGTGTACGTGGGACACATTATA AAGTAGGGGTGGAAAACATAATGGATCGATGAAAACCGGAAACAATCGAA CGCACCATATAATTTATAATCGCATATTTGTGATGTCTCTTGTTTATAAG TAAATTTAAGAGGAGCCCGCTATCTCGTTCGCGTTTAACGGGAAAATGTA TGTAAAATGAGTGATTACTGAGCTTCAGAAACCTCTTGGCTCTCCTTACA GCAACTTTATCGGCGCGATCATGTTACCCGTATTTTGAAGCGGCGGGTAT TTCCTACTGACCTACGGACACAAGTAAACGCCTGAGTGGAAAATATTGAT ATTGTCCTTTGACAAATATACGCCGATGAGCTTGAGTTTGCTCGATGCTC GATTACCTCCGGCCACTCCAAACGTAAACAGTACGGATGACGATGTCTTC GATGTATTTCTTGGCCTTGCCACAGC
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Coding sequence (CDS) from alignment at H-elongata_contig786:10545..13270+

>mRNA_H-elongata_contig786.15533.1 ID=mRNA_H-elongata_contig786.15533.1|Name=mRNA_H-elongata_contig786.15533.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=834bp|location=Sequence derived from alignment at H-elongata_contig786:10545..13270+ (Himanthalia elongata Himel1 dioecious)
ATGCTTTGCAACGATCGAGATGCTTTGCAACGATCGAGGCGATTGCTTCA
AGCCAGGAAATCACGCCAGCACTTTTGGAGGCAACCCCTTAGCCTGTGCG
GCCGCCAACTGTGCGATTGCTTCAAGCCAGGAAATCACGCCAGCACTTTT
GGAGGCAACCCCTTAGCCTGTGCGGCCGCCAACTGTGCGGATAGTGGTGC
CCTGCTGACGAACGTGAGGGATAGGGGAGAGCAGCTCCGCGCGGGACTGG
AACGTCTTCGCCTCAAGTATCCGGAGACAATCGCTGGCGGATAGTGGTGC
CCTGCTGACGAACGTGAGGGATAGGGGAGAGCAGCTCCGCGCGGGACTGG
AACGTCTTCGCCTCAAGTATCCGGAGACAATCGCTGGGATTCGAGGATGG
GGTCTCATAAACGGTTTGGTCCTCGAGGATGATTCTCCAGTACTCGCGGG
AGACGTTGTGGCAGAAACGACGGCGCTTGGACTCCTCCTAGTACCTGCTG
GGCTCAAGGGATTCGAGGATGGGGTCTCATAAACGGTTTGGTCCTCGAGG
ATGATTCTCCAGTACTCGCGGGAGACGTTGTGGCAGAAACGACGGCGCTT
GGACTCCTCCTAGTACCTGCTGGGCTCAAGGTCGTCCGGTTCGTACCGCC
TCTGATTGCCACTGAGGCGGAGGTATCCACAGCGCTCGCAATATTCGACC
AAGCGCTCGCCAAGGTCACCCGCGTGACCTGAGTCGTCCGGTTCGTACCG
CCTCTGATTGCCACTGAGGCGGAGGTATCCACAGCGCTCGCAATATTCGA
CCAAGCGCTCGCCAAGGTCACCCGCGTGACCTGA
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