mRNA_H-elongata_contig78590.15529.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig78590.15529.1 vs. uniprot
Match: D7FPE6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPE6_ECTSI) HSP 1 Score: 315 bits (808), Expect = 1.130e-100 Identity = 174/225 (77.33%), Postives = 201/225 (89.33%), Query Frame = 1
Query: 1 QALGNQNDKLKSNYEAVRTELIQLREKHSTTRKQLLQTVEGRVEADQRTETLANKWKVQLEARTRELESLQAKLIPQDLDMLRAKVQEELEVPHQRRVALLESEVEKHRQMFCKARREHERCRAEYEQYTIDQGRELEALHHQRRAESQALKARVQALEESLADATRNEEGRLLRRKLEEAETTKVQLYAEISDVRSKKEAAEVERHRLVLAQRNETVTTHAQVS 675
Q+LG+QNDKLKSNYEAVRTELI LREKH+TTRKQLL+ VE RV+ADQRTETL +KWKVQLE RTRELE+LQAKL+PQDLDMLRAKVQEEL+VPHQRRV LE+EVE+HRQMFCKARR+HERC+AEYEQYTIDQGRE+EALH Q +AES LK RVQ LE S ADA R+EEGRLLRRKLEEAE K QL+AE++ VRS++EAAE+ERH+LVLA ++E+ TH +VS
Sbjct: 49 QSLGSQNDKLKSNYEAVRTELIHLREKHNTTRKQLLEAVESRVDADQRTETLVHKWKVQLEGRTRELEALQAKLVPQDLDMLRAKVQEELQVPHQRRVGSLEAEVERHRQMFCKARRDHERCKAEYEQYTIDQGREMEALHQQHKAESHVLKMRVQDLEASFADADRDEEGRLLRRKLEEAEAVKAQLHAEMAAVRSEREAAELERHKLVLAHQSESAATHVRVS 273
BLAST of mRNA_H-elongata_contig78590.15529.1 vs. uniprot
Match: A0A835YNG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNG1_9STRA) HSP 1 Score: 172 bits (436), Expect = 2.290e-46 Identity = 109/228 (47.81%), Postives = 148/228 (64.91%), Query Frame = 1
Query: 1 QALGNQNDKLKSNYEAVRTELIQLREKHSTTRKQLLQTVEGRVEADQRTETLANKWKVQLEARTRELESLQAKLIPQDLDMLRAKVQEELEVPHQRRVALLESEVEKHR------QMFCKARREHERCRAEYEQYTIDQGRELEALHHQRRAESQALKARVQALEESLADATRNEEGRLLRRKLEEAETTKVQLYAEISDVRSKKEAAEVERHRLVLAQRNETVTTHA 666
Q+L +N+ LK NY+ ++ EL++ R+K+S RKQLL+ VE ++E D+ TE + +KW+VQLEART+ELESL+++L+PQDLDMLR ++QEE+E PH+RR+A +E+E EKHR QMF RR+ ERCRAEYEQ TID RE E + Q ++E AL+ R+ LE + AD L E+S VR+ KE EVERHRLVLA + E A
Sbjct: 31 QSLREENETLKVNYDTIKGELLRTRDKYSAQRKQLLEAVEAKIEGDRTTEAVVHKWRVQLEARTKELESLRSQLVPQDLDMLRMQMQEEIEGPHKRRLAAVEAEAEKHRRVQRQLQMFFNVRRDLERCRAEYEQSTIDHTREAETVAAQHKSEVAALRMRLAELEATAADXXXXXXXXXXXXXXXXXXXADAHLRQELSAVRADKEKLEVERHRLVLAHQGEVAAARA 258
BLAST of mRNA_H-elongata_contig78590.15529.1 vs. uniprot
Match: A0A8J2SAS7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SAS7_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.370e-26 Identity = 73/163 (44.79%), Postives = 107/163 (65.64%), Query Frame = 1
Query: 4 ALGNQNDKLKSNYEAVRTELIQLREKHSTTRKQLLQTVEGRVEADQRTETLANKWKVQLEARTRELESLQAKLIPQDLDMLRAKVQEELEVPHQRRVALLESEVEKHRQMFCKARREHERCRAEYEQYTIDQGRELEALHHQRRAESQALKARVQALEESLAD 492
+L QN L+ +++ R E+++ REK + R +L++ + ++EAD+ TE L KWKVQL++RTRELE +Q KL+PQDLDMLR ++QEELEVPHQ++++ LE+E +QMF RRE ER + E+ YT Q + AE + L+ RV LE + AD
Sbjct: 44 SLREQNAILQRDHDKAREEVLRQREKVAANRTELVEQAKAKIEADRATEALVAKWKVQLDSRTRELEEVQKKLVPQDLDMLRIQIQEELEVPHQQKISDLEAEARSFQQMFFNVRRELERSKTEFAAYTEHQEAARASDRATHDAEHRGLRRRVVELEAAAAD 206
BLAST of mRNA_H-elongata_contig78590.15529.1 vs. uniprot
Match: A0A7S4DKB8_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKB8_HETAK) HSP 1 Score: 109 bits (272), Expect = 1.490e-25 Identity = 71/159 (44.65%), Postives = 102/159 (64.15%), Query Frame = 1
Query: 1 QALGNQNDKLKSNYEAVRTELIQLREKHSTTRKQLLQTVEGRVEADQRT-ETLANKWKVQLEARTRELESLQAKLIPQDLDMLRAKVQEELEVPHQRRVALLESEVEKHRQMFCKARREHERCRAEYEQYTIDQGRELEALHHQRRAESQALKARVQAL 474
Q L + N+ LK NYEAVR E+I +REK+ RKQ Q E ++ A++ E +AN W+ +L + E E LQ KL PQD++ LR ++EELE + + + E EVEK RQMF RRE+E+ + EY Q+T D +E+E LH Q +AE+ AL+ ++AL
Sbjct: 39 QNLKSDNEILKKNYEAVRGEIIGVREKYQKARKQAAQATEAKLLAERDVFEQIAN-WENKLHRKVLEYEELQKKLAPQDINALRVDIKEELEKEFETKQRITEDEVEKWRQMFYNVRREYEKIKTEYGQFTADSSKEMELLHDQAKAEAAALRGEIEAL 196
BLAST of mRNA_H-elongata_contig78590.15529.1 vs. uniprot
Match: H3HCN6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCN6_PHYRM) HSP 1 Score: 110 bits (275), Expect = 2.030e-24 Identity = 72/163 (44.17%), Postives = 102/163 (62.58%), Query Frame = 1
Query: 103 LLQTVEGRVEADQRTETLANKWKVQLEARTRELESLQAKLIP-QDLDMLRAKVQEELEVPHQRRVALLESEVEKHRQMFCKARREHERCRAEYEQYTIDQGRELEALHHQRRAESQALKARVQALEESLADATRNEEGRLLRRKLEEAETTKVQLYAEISDVR 588
L+Q E ++E+D++ E L KWK QLE + R ESLQ K P +DL+ LR K+QEELE P+Q+R+ L+ EVE+HRQM + RRE E + EYEQ++IDQG E+E +H L+ ++Q E+ A+A EE R L ++ E A+ L E+ DVR
Sbjct: 5 LMQETEQKIESDRKHEELIAKWKKQLEVKARAFESLQKKFAPPRDLEQLRIKIQEELEGPYQQRIDHLQDEVERHRQMSFEMRREFEALKTEYEQFSIDQGNEMECIHETYEITMNDLRRKLQLAEQMAANAQHAEEIRRLEQQREVAQIEIKSLRDEVKDVR 167
BLAST of mRNA_H-elongata_contig78590.15529.1 vs. uniprot
Match: A0A2D4BVY0_PYTIN (GBBH-like_N domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVY0_PYTIN) HSP 1 Score: 106 bits (265), Expect = 7.100e-23 Identity = 72/193 (37.31%), Postives = 117/193 (60.62%), Query Frame = 1
Query: 1 QALGNQNDKLKSNYEAVRTELIQLREKHSTTRKQLLQTVEGRVEADQRTETLANKWKVQLEARTRELESLQAKLIP-QDLDMLRAKVQEELEVPHQRRVALLESEVEKHRQMFCKARREHERCRAEYEQYTIDQGRELEALHHQRRAESQALKARVQALEESLADATRNEEGRLLRRKLEEAETTKVQLYAEI 576
Q L + D N + ++ E+ +L ++ + L+Q E ++E+D++ E L KWK QLE +TR E LQ KL P +DL+ LR ++QE+LE PHQ+R+A ++ E++K R + + RRE+E +AEYEQY IDQG E+E LH + L+ ++Q+ E+++ D+ E R L + + A+ L+ EI
Sbjct: 446 QLLQRERDGFAHNNQKLKDEVKRLHDRCERLQNVLVQETEQKIESDRKHEELIAKWKKQLELKTRAFEVLQKKLAPPRDLEQLRIQIQEQLEEPHQQRLAAMQGEIDKQRAISFELRREYETIKAEYEQYAIDQGNEMECLHTTYESRITDLRKKLQSAEDAVRDSQHAETIRRLEHQRDAAQVEVKLLHQEI 638
BLAST of mRNA_H-elongata_contig78590.15529.1 vs. uniprot
Match: A0A6A3ZHS8_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZHS8_9STRA) HSP 1 Score: 106 bits (264), Expect = 9.020e-23 Identity = 68/149 (45.64%), Postives = 94/149 (63.09%), Query Frame = 1
Query: 103 LLQTVEGRVEADQRTETLANKWKVQLEARTRELESLQAKLIP-QDLDMLRAKVQEELEVPHQRRVALLESEVEKHRQMFCKARREHERCRAEYEQYTIDQGRELEALHHQRRAESQALKARVQALEESLADATRNEEGRLLRRKLEEAE 546
L+Q E ++E+D++ E L KWK QLE + R ESLQ K P +DL+ LR K+QEELE P+Q+R+ L+ EVE+HRQM RRE E + EYEQ++IDQG E+E +H L+ +Q EES A + EE R L ++ E A+
Sbjct: 84 LMQETEQKIESDRKHEELIAKWKKQLEVKARAFESLQKKFAPPRDLEQLRIKIQEELEGPYQQRIENLQDEVEQHRQMSFDMRREFEALKTEYEQFSIDQGNEMECIHETYEVTLNDLRRNLQLAEESAAHSQHTEELRRLEQQREAAQ 232
BLAST of mRNA_H-elongata_contig78590.15529.1 vs. uniprot
Match: D0MX45_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MX45_PHYIT) HSP 1 Score: 104 bits (260), Expect = 9.410e-23 Identity = 72/180 (40.00%), Postives = 110/180 (61.11%), Query Frame = 1
Query: 52 RTELIQLREKHSTTRKQLLQTVEGRVEADQRTETLANKWKVQLEARTRELESLQAKLIP-QDLDMLRAKVQEELEVPHQRRVALLESEVEKHRQMFCKARREHERCRAEYEQYTIDQGRELEALHHQRRAESQALKARVQALEESLADATRNEEGRLLRRKLEEAETTKVQLYAEISDVR 588
R E+ +L E++ + L+Q E ++E+D++ E L KWK QLEA+ R ESLQ K P +DL+ LR K+QEELE P+Q+R+ L+ E+E+ R M RRE E + EYEQ++IDQG E+E + L+ ++QA E++ A++ E+ R L ++ E A+ L E+ DVR
Sbjct: 4 RGEVKRLHERYDKMQLVLMQETEQKIESDRKHEELIGKWKKQLEAKVRAFESLQKKFAPPRDLEQLRIKIQEELEGPYQQRIDNLQDEMERQRLMSFDMRREFETLKTEYEQFSIDQGNEMECVQETYELTLNDLRRKLQAAEDAAANSQHAEKARRLEQQREAAQIEIKALRNEVRDVR 183
BLAST of mRNA_H-elongata_contig78590.15529.1 vs. uniprot
Match: G4YQA8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YQA8_PHYSP) HSP 1 Score: 105 bits (263), Expect = 1.150e-22 Identity = 68/159 (42.77%), Postives = 100/159 (62.89%), Query Frame = 1
Query: 109 QTVEGRVEADQRTETLANKWKVQLEARTRELESLQAKLIP-QDLDMLRAKVQEELEVPHQRRVALLESEVEKHRQMFCKARREHERCRAEYEQYTIDQGRELEALHHQRRAESQALKARVQALEESLADATRNEEGRLLRRKLEEAETTKVQLYAEISD 582
+T + ++E+D++ E L KWK QLE + R ESLQ K P +DL+ LR K+QEELE P+Q+R+ L+ EVE+HRQM RRE E + EYEQ++IDQG E+E +H L+ +++ EES A++ + EE R L ++ E A+ L E+ D
Sbjct: 8 ETEQKKIESDKKHEELIAKWKKQLEVKARAFESLQKKFAPPRDLEQLRIKIQEELEGPYQQRIDNLQDEVERHRQMSFDMRREFEALKTEYEQFSIDQGNEMECIHETYEVTLNDLRRKLRLAEESAANSNQTEEIRRLEQQREAAQIELKALREEVRD 166
BLAST of mRNA_H-elongata_contig78590.15529.1 vs. uniprot
Match: A0A813AST6_9DINO (CEP83 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AST6_9DINO) HSP 1 Score: 103 bits (256), Expect = 5.660e-22 Identity = 76/210 (36.19%), Postives = 124/210 (59.05%), Query Frame = 1
Query: 1 QALGNQNDKLKSNYEAVRTELIQLREKHSTTRKQLLQTVEGRVEADQRTETLANKWKVQLEARTRELESLQAKLIP-QDLDMLRAKVQEELEVPHQRRVALLESEVEKHRQMFCKARREHERCRAEYEQYTIDQGRELEALHHQRRAESQALKARVQALEESL-------ADATRNEEGRLLRRKLEEAETTKVQLYAEISDVRSKKEAA 606
Q+L +ND L++ YE V+ EL +++ KH R+Q + E +E +Q+ E L ++WK Q ++Q ++ P +DLD+LR ++QEELEVPHQ+RVA LE+ +EKHR ++ ++RE E +AE+EQ + D + EA A+ + LK R+ LEE L ADA R + ++A + +L AE +++R +++AA
Sbjct: 47 QSLRTENDSLRAGYEKVKQELTRMKGKHDAVRQQYMD--EAELELEQKHEELVSEWKQQXXXXXXXFLAMQEQMAPPRDLDVLRVRIQEELEVPHQKRVAELEAAIEKHRALYFTSKREAELLKAEFEQSSADHAADAEATAAAHTAQVKTLKRRIADLEERLDGDGRTAADALRAAQAAA-----DDAAVARARLAAEATEMREQRDAA 249 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78590.15529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig78590.15529.1 >prot_H-elongata_contig78590.15529.1 ID=prot_H-elongata_contig78590.15529.1|Name=mRNA_H-elongata_contig78590.15529.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=225bp QALGNQNDKLKSNYEAVRTELIQLREKHSTTRKQLLQTVEGRVEADQRTEback to top mRNA from alignment at H-elongata_contig78590:1247..2889+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig78590.15529.1 ID=mRNA_H-elongata_contig78590.15529.1|Name=mRNA_H-elongata_contig78590.15529.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1643bp|location=Sequence derived from alignment at H-elongata_contig78590:1247..2889+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig78590:1247..2889+ >mRNA_H-elongata_contig78590.15529.1 ID=mRNA_H-elongata_contig78590.15529.1|Name=mRNA_H-elongata_contig78590.15529.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1350bp|location=Sequence derived from alignment at H-elongata_contig78590:1247..2889+ (Himanthalia elongata Himel1 dioecious)back to top |