mRNA_H-elongata_contig7851.15521.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7851.15521.1 vs. uniprot
Match: D7FIA4_ECTSI (Protein phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIA4_ECTSI) HSP 1 Score: 341 bits (875), Expect = 1.040e-109 Identity = 192/343 (55.98%), Postives = 241/343 (70.26%), Query Frame = 1
Query: 1 QGGEDACFLLEND-----MGIFDGVGSWASKGHDPGEFARGFAEAVATNITAQRLEESASHNQNMKEGMSRQRFVKGVNLEQALEYATVNTI---GKGTCTACLVTYDPRRELLSGVNIGDSGALLVRRDAGGTPFVALRSVTQRHGFNQPYQLGTASRDKPRDAVPFGFFVREGDVLVLATDGLLDNMYETDIVRCIADACDREAESASASVNISLQPGLGGLAADLAGTLARRAFELSRDNDRITPWEEEAVAAGIILPRYSIE---ESQGKGGFELAASLWGFALDLGVLSGLKTRRGGGKKFTKRQNDSRMRAVSEKDALRFRGGKVDDITVVVATVQQ 996
+GG+DA F+ D +G+FDGVG WAS GHDPG F+RGFA+A A NITAQR EE+ S ++ EG R +GV+L+QALEYAT N +GTCTAC+VT+DP +L+GVN+GDSGALLVRRDA GTPFVALR+ TQRH FNQPYQLGT SRDK DA F F+VREGD++VLATDGLLDNM+E+DI+RCI +A + +AE+ + +P DLA LAR+AF LSRD +R+TPWEEEAVAAG+I R S++ +GK E AS WG AL+ V +GL + R G K Q+D R + E+D FRGGK+DDITV+VATV++
Sbjct: 65 RGGDDAYFVNVGDSGALDLGVFDGVGGWASLGHDPGVFSRGFAKATAANITAQRAEEAVSLRRSQLEGEPLPRIAQGVDLQQALEYATTNAALAGTQGTCTACVVTFDPVYGMLNGVNVGDSGALLVRRDARGTPFVALRTATQRHNFNQPYQLGTGSRDKAHDARDFLFYVREGDLVVLATDGLLDNMFESDILRCIEEAFEGDAETTAHEA--CDKP------VDLASALARKAFNLSRDKERLTPWEEEAVAAGVIPTRGSVDGPSTDRGKRRLEWDASKWGLALERSVTAGLNSFRRGAAGAPK-QDDRRDSIMPEEDTTSFRGGKMDDITVLVATVRR 398
BLAST of mRNA_H-elongata_contig7851.15521.1 vs. uniprot
Match: A0A835Z8H6_9STRA (Protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H6_9STRA) HSP 1 Score: 203 bits (517), Expect = 2.290e-57 Identity = 136/333 (40.84%), Postives = 178/333 (53.45%), Query Frame = 1
Query: 4 GGEDACFLLENDMGIFDGVGSWASKGHDPGEFARGFAEAVATNITAQRLEESASHNQNMKEGMSRQRFVKGVNLEQALEYATVNTIGKGT----CTACLVTYDPRRELLSGVNIGDSGALLVRRDAGGTPFVALRSVTQRHGFNQPYQLGTASRDKPRDAVPFGFFVREGDVLVLATDGLLDNMYETDIVRCIADACDREAESASASVNISLQPGLGGLAADLAGTLARRAFELSRDNDRITPWEEEAVAAGIILPRYSIEESQGKGGFELAASLWGFALDLGVLSGLKTRRGGGKKFTKRQNDSRMRAVSEKDALRFRGGKVDDITVVVATV 990
GGEDA FLL D+G+FDGVG + G DP F+R FA A A NITAQR A G KGV+L ALE+A + + +GT CTAC+ ++D LL+G N+GDSG ++RRD FVA R+ Q+H FN PYQLGT S D P DAV F F+ R GDV+VLATDGL DN+++ DIV +A A R + A+ ++ + +A L RA ELS D +R +PW A A + R + G AA+ F LG L G + + RA++ + + GGK+DDITVVVA V
Sbjct: 25 GGEDAFFLLPKDIGVFDGVGGFRKLGVDPAAFSRAFAAAAAHNITAQRARWEAIGGGGGGSGAQTVATFKGVDLRLALEHALSSAL-RGTRGGGCTACVASFDAASGLLTGANLGDSGLAVLRRDLSKRMFVAYRTTPQQHRFNMPYQLGTNSTDTPADAVQFRFYTRPGDVIVLATDGLFDNLFDEDIVETVA-ALLRRKHAGHAAAPVTPEA--------IAACLVLRAVELSADRERESPWHRAAAQARLAARR----RRRASG----AAAWRSFTRRLGELLG--------------ELEPGTRALAAYEGPAYEGGKLDDITVVVACV 325
BLAST of mRNA_H-elongata_contig7851.15521.1 vs. uniprot
Match: A0A6S9M3S8_HETAK (Protein phosphatase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M3S8_HETAK) HSP 1 Score: 179 bits (453), Expect = 1.140e-47 Identity = 107/250 (42.80%), Postives = 131/250 (52.40%), Query Frame = 1
Query: 4 GGEDACFLLENDMGIFDGVGSWASKGHDPGEFARGFAEAVATNITAQRLEESASHNQNMKEGMSRQRFVKGVNLEQALEYATVNTIGKGTCTACLVTYDPRRELLSGVNIGDSGALLVRRDAGGTPFVALRSVTQRHGFNQPYQLGTASRDKPRDAVPFGFFVREGDVLVLATDGLLDNMYETDIVRCIADACDREAESASASVNISLQPGLGGLAADLAGTLARRAFELSRDNDRITPWEEEAVAAGII 753
GGEDACF+ + +G+FDGVG WA+ G D G ++R A A NI QR + V+L ALEYA N G+ TA + +DPR LL G N+GDSGAL +RRDA G FV LR+ Q HGFN PYQLGT D P DA F F R GDVLVLA+DG+LDN++E DI+ C+ + A A A AF S D +R PWEE A AG +
Sbjct: 110 GGEDACFVSSHSVGVFDGVGGWATLGVDTGLYSRELARLTALNIEEQRNTTGSD----------------AVDLVSALEYALKNNPNTGSTTAVVAAWDPRGGLLRGANLGDSGALCLRRDAAGEYFVLLRTAAQEHGFNFPYQLGTNCTDMPSDAELFEFAPRAGDVLVLASDGVLDNLFEQDIIDCVVETLASNNPEAVRRC---------------AKKCAETAFNFSIDAERKGPWEEGARKAGKL 328
BLAST of mRNA_H-elongata_contig7851.15521.1 vs. uniprot
Match: A0A0M0JPE7_9EUKA (Protein phosphatase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JPE7_9EUKA) HSP 1 Score: 134 bits (336), Expect = 6.250e-32 Identity = 90/260 (34.62%), Postives = 130/260 (50.00%), Query Frame = 1
Query: 4 GGEDACFLLENDMGIFDGVGSWASKGHDPGEFARGFAEAVATNITAQRLEESASHNQNMKEGMSRQRFVKGVNLEQALEYATVNTIGKGTCTACLVTYDPRRELLSGVNIGDSGALLVRR--DAGGTPFVALRSVTQRHGFNQPYQLGTASRDKPRDAVPFGFFVREGDVLVLATDGLLDNMYETDIVRCIADACDREAESASASVNISLQPGLGGLAADLAGTLARRAFELSRDNDRITPWEEEAVAAGIILPRYSIEE 777
GGEDA F+ N G+FDGVGSWAS G D G F+R + TA RL E H+ + LE+ALE + G+CTAC++ D LS +N+GDSG L R+ G P + + S Q+H FN P+QLG + D+PR+ + V+ GD++VLATDGL DN+++ +I +A GG L+ +A A ++S D R +P+ EA A G +P +++
Sbjct: 28 GGEDAFFVQNNVFGVFDGVGSWASHGVDAGAFSRALSAG-----TASRLPERVGHSS-----------YSVLELEKALEASLSQVSVLGSCTACMLCVDCSSSTLSALNLGDSGFRLFRQLDSEAGAPRLEMGSRPQQHFFNCPFQLGGDNADRPRNGDRYTHAVQPGDLIVLATDGLFDNLFDDEIGALLAK---------------------GGTIEQLSERVASTARKVSFDTKRRSPFTVEARAQGYNMPGGKVDD 250
BLAST of mRNA_H-elongata_contig7851.15521.1 vs. uniprot
Match: A0A7J7IP48_9RHOD (Protein phosphatase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IP48_9RHOD) HSP 1 Score: 134 bits (337), Expect = 3.840e-31 Identity = 110/346 (31.79%), Postives = 163/346 (47.11%), Query Frame = 1
Query: 1 QGGEDACFLLENDMGIFDGVGSWASKGHDPGEFARGFAEAVATNITAQRLEESASHNQNMKEGMSRQRFVKGVNLEQALEYATVNTIGKGTCTACLVTY---------DPRRELLSGVNIGDSGALLVRRDAGGTPFVALRSVTQRHGFNQPYQLGTASRDKPRDAVPFGFFVREGDVLVLATDGLLDNMYETDIVRCIADACDREAESASASVNISLQPGLGGLAADLAGTLARRAFELSRDNDRITPWEEEAVA-AGIILPRYSIEESQGKGGFELAASLWGFALDLGVLSGLKTRRGGGKKFTKRQNDSRMR--AVSEKDA-LRFRGGKVDDITVVVATVQQT 999
+GGEDA F+ + G+FDGVG W++ G DPG ++R AE V + ++ ++S L LE A G+CTAC+V D RR +L+ VN+GDSG +++R+ + RS Q+H FN PYQLGT S+D P DA V+ GD LVL TDGL DN+++ +IV CI D C E +A+ + L AGT + A L + D T E + A + ++ + ELA L A+ T ++++RM A++ + A + GGK+DD+TV+V V +T
Sbjct: 95 RGGEDAFFITKRAAGVFDGVGGWSALGIDPGLYSRRLAELVRAGTES--MDATSS-------------------LVSVLERAAQTNEAVGSCTACVVALSTLMEAAEPDKRRSVLTCVNLGDSGMMVLRKGK-----IIFRSKEQQHYFNCPYQLGTQSKDTPYDAFVDRIDVQVGDWLVLGTDGLFDNVFDEEIVDCIRDWCRERTERRAAAPDDPLSAN--------AGTASPMASSLKTEADGRTAREMHSAADVDRAMTAPALLTAGAPALRELAERLARMAV------------------TCAEDENRMSPFALNARSAGFWYYGGKLDDVTVIVGRVSRT 388
BLAST of mRNA_H-elongata_contig7851.15521.1 vs. uniprot
Match: M2WW57_GALSU (Protein phosphatase n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WW57_GALSU) HSP 1 Score: 126 bits (316), Expect = 3.410e-29 Identity = 90/249 (36.14%), Postives = 124/249 (49.80%), Query Frame = 1
Query: 7 GEDACFLLENDMGIFDGVGSWASKGHDPGEFARGFAEAVATNITAQRLEESASHNQNMKEGMSRQRFVKGVNLEQALEYATVNTIGKGTCTACLVTYDPRRELLSGVNIGDSGALLVRRDAGGTPFVALRSVTQRHGFNQPYQLGTASRDKPRDAVPFGFFVREGDVLVLATDGLLDNMYETDIVRCIADACDREAESASASVNISLQPGLGGLAADLAGTLARRAFELSRDNDRITPWEEEAVAAGII 753
GEDA F+ EN G+FDGVG W +KG DP +A A N TA+ + + R + ALEYA +T G+ TA +V Y ++ L G+N+GDSG L VR+ + V R+ Q+H FN P+QLGT SR++ +D + GD L+L TDGL DNM +I+ I C E ++ P L LA LA+ A E S D ++ +P+ E A AG I
Sbjct: 58 GEDAYFVEENAAGVFDGVGGWEAKGVDPSLYANELA-----NKTAE---------------LRKVRIKGSCQIVDALEYAAQSTTFMGSSTATVVAYCEEKDSLIGLNLGDSGFLQVRKGS-----VLFRTTEQQHFFNCPFQLGTGSRNRVQDGEFIDLRIEVGDWLILGTDGLFDNMKTEEILELIG--CYDE----------NVDPPL------LAHRLAQTAMEFSMDENKTSPFAENANEAGFI 263
BLAST of mRNA_H-elongata_contig7851.15521.1 vs. uniprot
Match: R1DXK5_EMIHU (Protein phosphatase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DXK5_EMIHU) HSP 1 Score: 122 bits (305), Expect = 7.110e-28 Identity = 89/252 (35.32%), Postives = 113/252 (44.84%), Query Frame = 1
Query: 4 GGEDACFLLENDMGIFDGVGSWASKGHDPGEFARGFAEAVATNITAQRLEESASHNQNMKEGMSRQRFVKGVNLEQALEYATVNTIGKGTCTACLVTYDPRRELLSGVNIGDSGALLVRRDAGGTPF---VALRSVTQRHGFNQPYQLGTASRDKPRDAVPFGFFVREGDVLVLATDGLLDNMYETDIVRCIADACDREAESASASVNISLQPGLGGLAADLAGTLARRAFELSRDNDRITPWEEEAVAAGI 750
GGEDA F + G+FDGVG WA +G DPG F+R A A + E+A +L +AL+ A GTCTACLV L + +N+GDSG L+R P V LRS Q+H FN P+QLG S D D + VR GD+L+L TDG+ DN+ E I +A R G A LA LA A E S R +P+ A AG+
Sbjct: 23 GGEDAWFARGSTFGVFDGVGGWAEQGIDPGLFSRALAVETAREVAGIEGAEAAEE-----------------DLARALDTARSRVTAVGTCTACLVHLSASGSLTA-LNLGDSGFRLLRPSRVSPPHRLAVTLRSREQQHRFNCPFQLGVGSGDSAADGAVYSGVVRAGDLLLLVTDGVTDNLSERQICEALAGPLAR-----------------GEPARSLAAALAASAHEASLQPGRSSPFAAAAQNAGL 239
BLAST of mRNA_H-elongata_contig7851.15521.1 vs. uniprot
Match: J9IEU2_9SPIT (Protein phosphatase n=3 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IEU2_9SPIT) HSP 1 Score: 122 bits (307), Expect = 5.610e-27 Identity = 89/253 (35.18%), Postives = 128/253 (50.59%), Query Frame = 1
Query: 1 QGGEDACFLLENDMGIFDGVGSWASKGHDPGEFARGFAEAVATNITAQRLEESASHNQNMKEGMSRQRFVKGVNLEQALEYATVNTIGKGTCTACLVTYDPRRELLSGVNIGDSGALLVRRDAGGTPF--VALRSVTQRHGFNQPYQLGTASRDKPRDAVPFGFFVREGDVLVLATDGLLDNMYETDIVRCIADACDREAESASASVNISLQPGLGGLA--ADLAGTLARRAFELSRDNDRITPWEEEAVAAG 747
+GGEDA N + + DGVG W SKG DPG FAR V T + +L S N + + V +NL + L T +GT T L + D + ++++G+N+GDS ++VR D V RS Q++ FN PYQ GT + D P A V+ D++VL TDG+ DN+Y+ D+++C+ D ES +AS S Q L L + + LA A +LS D +P+ A AAG
Sbjct: 124 RGGEDAWIFTSNLLAVADGVGGWNSKGVDPGIFARELCSHVQT-VFFDKLSNSTGTNVEENKEVIADVRVMDINLIEVLCEGVRRTQARGTSTFVLTSIDQQSQVINGLNLGDSAYMIVRPDPNEESGFQVLFRSKEQQYRFNYPYQCGT-NYDLPTHADLNQHPVQHNDLIVLGTDGVFDNLYDIDVLKCLKPEVDYTNESNAASPTYSSQYDLYNLIHPQEASNCLANTAEKLSYDKTYDSPFSVGARAAG 374
BLAST of mRNA_H-elongata_contig7851.15521.1 vs. uniprot
Match: A0A7S0BL10_9RHOD (Protein phosphatase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BL10_9RHOD) HSP 1 Score: 119 bits (298), Expect = 1.600e-26 Identity = 68/192 (35.42%), Postives = 110/192 (57.29%), Query Frame = 1
Query: 1 QGGEDACFLLENDMGIFDGVGSWASKGHDPGEFARGFAEAVATNITAQRLEESASHNQNMKEGMSRQRFVKGVNLEQALEYATVNTIGKGTCTACLVTYDPRRELLSGVNIGDSGALLVRRDAGGTPFVALRSVTQRHGFNQPYQLGTASRDKPRDAVPFGFFVREGDVLVLATDGLLDNMYETDIVRCIAD 576
+GGEDA F+LE MG+FDGVG WAS+G DPG ++R + +T ++++E G +L +AL++A N +G+ TAC+ P ++ +N+GDSG + +R G + ++ Q+H FN P+QLG+ DK +D + V+ GD L+LATDGLLDN+++ ++ + + D
Sbjct: 66 KGGEDAFFVLETAMGVFDGVGGWASQGIDPGLYSR-----KLSRLTEEQIKE-------------------GKDLAEALDHAHKNNDLQGSTTACIARILPGGKIAL-LNVGDSGLIAIRPSQG----IYFKTPDQQHYFNCPFQLGSTFEDKVKDGIAGEIPVQSGDYLILATDGLLDNLHDIELEKIVKD 228
BLAST of mRNA_H-elongata_contig7851.15521.1 vs. uniprot
Match: R1F9U6_EMIHU (Protein phosphatase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F9U6_EMIHU) HSP 1 Score: 122 bits (305), Expect = 1.710e-26 Identity = 89/252 (35.32%), Postives = 113/252 (44.84%), Query Frame = 1
Query: 4 GGEDACFLLENDMGIFDGVGSWASKGHDPGEFARGFAEAVATNITAQRLEESASHNQNMKEGMSRQRFVKGVNLEQALEYATVNTIGKGTCTACLVTYDPRRELLSGVNIGDSGALLVRRDAGGTPF---VALRSVTQRHGFNQPYQLGTASRDKPRDAVPFGFFVREGDVLVLATDGLLDNMYETDIVRCIADACDREAESASASVNISLQPGLGGLAADLAGTLARRAFELSRDNDRITPWEEEAVAAGI 750
GGEDA F + G+FDGVG WA +G DPG F+R A A + E+A +L +AL+ A GTCTACLV L + +N+GDSG L+R P V LRS Q+H FN P+QLG S D D + VR GD+L+L TDG+ DN+ E I +A R G A LA LA A E S R +P+ A AG+
Sbjct: 23 GGEDAWFARGSTFGVFDGVGGWAEQGIDPGLFSRALAVETAREVAGIEGAEAAEE-----------------DLARALDTARSRVTAVGTCTACLVHLSASGSLTA-LNLGDSGFRLLRPSRVSPPHRLAVTLRSREQQHRFNCPFQLGVGSGDSAADGAVYSGVVRAGDLLLLVTDGVTDNLSERQICEALAGPLAR-----------------GEPARSLAAALAASAHEASLQPGRSSPFAAAAQNAGL 239 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7851.15521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7851.15521.1 >prot_H-elongata_contig7851.15521.1 ID=prot_H-elongata_contig7851.15521.1|Name=mRNA_H-elongata_contig7851.15521.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=350bp MGIFDGVGSWASKGHDPGEFARGFAEAVATNITAQRLEESASHNQNMKEGback to top mRNA from alignment at H-elongata_contig7851:3727..7290+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7851.15521.1 ID=mRNA_H-elongata_contig7851.15521.1|Name=mRNA_H-elongata_contig7851.15521.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3564bp|location=Sequence derived from alignment at H-elongata_contig7851:3727..7290+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7851:3727..7290+ >mRNA_H-elongata_contig7851.15521.1 ID=mRNA_H-elongata_contig7851.15521.1|Name=mRNA_H-elongata_contig7851.15521.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2100bp|location=Sequence derived from alignment at H-elongata_contig7851:3727..7290+ (Himanthalia elongata Himel1 dioecious)back to top |