mRNA_H-elongata_contig78501.15520.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: D8LIH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIH2_ECTSI) HSP 1 Score: 225 bits (573), Expect = 2.230e-67 Identity = 113/126 (89.68%), Postives = 119/126 (94.44%), Query Frame = 1
Query: 16 LLIDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSFG-IQDDVTCLAWAPDSRHLVAGT 390
LLIDLVNHSSSVLPFESRKEIRLL PS DGRLLLVLDVDGRALLVNL RRVVLHR NFKKKIRAISFSP+DRFIAAGVGKK++VWRTPGRRHQIAPLSLLR +G +QDDVTCLAW PDSRHLVAG+
Sbjct: 39 LLIDLVNHSSSVLPFESRKEIRLLTPSRDGRLLLVLDVDGRALLVNLQRRVVLHRFNFKKKIRAISFSPDDRFIAAGVGKKVEVWRTPGRRHQIAPLSLLRGYGGLQDDVTCLAWGPDSRHLVAGS 164
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A6H5LCN5_9PHAE (Utp12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCN5_9PHAE) HSP 1 Score: 227 bits (579), Expect = 9.020e-67 Identity = 114/128 (89.06%), Postives = 121/128 (94.53%), Query Frame = 1
Query: 10 SQLLIDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSFG-IQDDVTCLAWAPDSRHLVAGT 390
+QLLIDLVNHSSSVLPFESRKEIRLL PS DGRLLLVLDVDGRALLVNL RRVVLHR NFKKKIRAISFSP+DRFIAAGVGKK++VWRTPGRRHQIAPLSLLR +G +QDDVTCLAW PDSRHLVAG+
Sbjct: 28 TQLLIDLVNHSSSVLPFESRKEIRLLTPSRDGRLLLVLDVDGRALLVNLQRRVVLHRFNFKKKIRAISFSPDDRFIAAGVGKKVEVWRTPGRRHQIAPLSLLRGYGGLQDDVTCLAWGPDSRHLVAGS 155
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A836CGV6_9STRA (Periodic tryptophan protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGV6_9STRA) HSP 1 Score: 171 bits (432), Expect = 2.070e-46 Identity = 79/134 (58.96%), Postives = 111/134 (82.84%), Query Frame = 1
Query: 4 LGSQLL-IDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSFG-IQDDVTCLAWAPDSRHLVAGTASM 399
+G+++L +DLVNH++S +PFE+RK+I LLA SHDGR+L+V+DV+GRALL+NL RRVVLHRLN K ++RA++FSP+DR++A VG+ ++VW TPGRRHQ APL L +++G DDVTC++WAPD +L+ G M
Sbjct: 34 VGNRVLWVDLVNHATSAMPFEARKDIELLAASHDGRILVVVDVEGRALLINLQRRVVLHRLNLKSRVRAVAFSPDDRYMAFAVGRTVEVWCTPGRRHQFAPLVLYKTYGGSTDDVTCISWAPDGCNLLVGGKDM 167
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A7S2WEL1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WEL1_9STRA) HSP 1 Score: 143 bits (361), Expect = 8.060e-37 Identity = 68/135 (50.37%), Postives = 100/135 (74.07%), Query Frame = 1
Query: 1 PLGSQLLI-DLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPG---RRHQIAPLSLLRSF-GIQDDVTCLAWAPDSRHLVAGT 390
P+G+++ + DLVNH S LPFE+RK I +A +D +LL+V+DVDGR LLVN + R V+HR NFK K+RA++FSP+D++IA G+ +QVWRTPG + + +PL+LLR++ G DDV ++W+PD R+ V G+
Sbjct: 35 PVGNRVTVFDLVNHRSRTLPFETRKNIHRIALGNDAKLLVVVDVDGRGLLVNFNARTVMHRFNFKSKVRALAFSPDDKYIAVSTGRHVQVWRTPGGTKMQKEFSPLALLRTYTGHDDDVLTISWSPDGRYFVTGS 169
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A8K1CJB2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJB2_PYTOL) HSP 1 Score: 137 bits (344), Expect = 1.560e-34 Identity = 66/135 (48.89%), Postives = 92/135 (68.15%), Query Frame = 1
Query: 1 PLGSQLL-IDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSFGIQ-DDVTCLAWAPDSRHLVAGTASM 399
P+G+++ DL+NH+S+ FE RK + LA SHD RLL+ +D DGR LL+NL +RVVL+R NFKK +RA+SFSP+DR++A G K+QVW TPG R + AP L R++G D+ L W+ DS+ V G +
Sbjct: 32 PVGNRITQFDLINHTSTTFSFEGRKNVEQLAVSHDSRLLVAVDSDGRCLLINLRKRVVLYRFNFKKAVRALSFSPDDRYLAVTHGNKVQVWHTPGLRREFAPFVLHRTYGGHYADILTLTWSHDSKFFVTGAEDL 166
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A2T9ZCN5_9FUNG (Utp12 domain-containing protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9ZCN5_9FUNG) HSP 1 Score: 133 bits (334), Expect = 3.430e-33 Identity = 65/132 (49.24%), Postives = 92/132 (69.70%), Query Frame = 1
Query: 1 PLGSQLLI-DLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSF-GIQDDVTCLAWAPDSRHLVAGT 390
P+G+Q+ I DLVN+ S +PFE+RK I +A S + +LLL +D DGRALLVN +RR+V+H NFK K+ FSP+ +FIA GVGK++++WR+PG +H+ AP L R + G DD+T + W DSR V +
Sbjct: 32 PVGNQVSIFDLVNNKSETMPFENRKNIVYIALSPNSQLLLTIDEDGRALLVNFYRRIVIHHFNFKGKVNCAEFSPDGKFIAVGVGKRIEIWRSPGLQHEFAPFILHRKYSGHYDDLTHINWFHDSRFFVTSS 163
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A2P4WX08_9STRA (Periodic tryptophan protein 2 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WX08_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.980e-32 Identity = 61/135 (45.19%), Postives = 92/135 (68.15%), Query Frame = 1
Query: 1 PLGSQLL-IDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSF-GIQDDVTCLAWAPDSRHLVAGTASM 399
P+G+++ DLVN++S FE+RK + +A SHD RLLL +D +GR LLVNL R VL+R +FK+ +RA++FSP+DR+IA +G K+Q+WRTPG + AP L R++ G DV ++W+ D++ V G +
Sbjct: 32 PVGNRITQFDLVNNTSRTFAFEARKNVERVAVSHDSRLLLAVDEEGRCLLVNLKRGAVLYRFHFKQPVRALNFSPDDRYIAVAIGNKVQLWRTPGLVREFAPFVLHRTYTGHYADVVSVSWSHDAKFFVTGAEDL 166
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A2D4BGV4_PYTIN (Periodic tryptophan protein 2 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGV4_PYTIN) HSP 1 Score: 130 bits (328), Expect = 2.210e-32 Identity = 66/135 (48.89%), Postives = 92/135 (68.15%), Query Frame = 1
Query: 1 PLGSQLL-IDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSFGIQ-DDVTCLAWAPDSRHLVAGTASM 399
P+G+++ DL+NH+S FESR+ + LA SHD RLL+ +DV+GR LLV+L + VVL R NFKK +RA++FS +DRF+A G KLQ+WRTP R AP L R++G D+T +AW+ DSR V G+ +
Sbjct: 32 PVGNRITQFDLINHTSRTFAFESRQNVARLAVSHDSRLLVAVDVEGRCLLVHLRKGVVLARFNFKKPVRALAFSRDDRFLAVSHGNKLQLWRTPAVRRDFAPFVLHRTYGGHYADITSVAWSHDSRFFVTGSXDL 166
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A5D6XQT4_9STRA (Utp12 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQT4_9STRA) HSP 1 Score: 130 bits (326), Expect = 4.150e-32 Identity = 64/135 (47.41%), Postives = 92/135 (68.15%), Query Frame = 1
Query: 1 PLGSQLL-IDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSFGIQ-DDVTCLAWAPDSRHLVAGTASM 399
P+G+++ DLVNHSS FESRK + LA SHD RLL+ +D DGR +LV+L + VVL+R +FKK +RA++FSP+D+F+A G K+Q+W TP R + AP +L R++G DV +AW+ D+R V G +
Sbjct: 32 PVGNRITQFDLVNHSSKTFAFESRKNVARLAVSHDARLLVAVDEDGRCMLVHLRKGVVLYRFHFKKPVRALAFSPDDKFLAVTHGNKVQLWHTPALRREFAPFALHRTYGGHYADVVSVAWSHDARFFVTGAEDL 166
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Match: A0A662WSJ9_9STRA (Utp12 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WSJ9_9STRA) HSP 1 Score: 130 bits (326), Expect = 4.170e-32 Identity = 63/125 (50.40%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 28 LVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVNLHRRVVLHRLNFKKKIRAISFSPNDRFIAAGVGKKLQVWRTPGRRHQIAPLSLLRSF-GIQDDVTCLAWAPDSRHLVAGTASM 399
L++H+S FE+RK + +A SHD RLLL +D DGR LLVNL R VL+R +FK+++RA+SFSP+DR+IA VG K+Q+WRTPG R + AP L RS+ G DV ++W+ DS+ V G +
Sbjct: 66 LLSHTSRTFAFEARKNVERVAVSHDSRLLLAVDEDGRCLLVNLRRGAVLYRFHFKQRVRALSFSPDDRYIAVAVGNKVQLWRTPGLRREFAPFVLHRSYSGHYADVLSVSWSHDSKFFVTGAEDL 190 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78501.15520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig78501.15520.1 >prot_H-elongata_contig78501.15520.1 ID=prot_H-elongata_contig78501.15520.1|Name=mRNA_H-elongata_contig78501.15520.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=151bp PLGSQLLIDLVNHSSSVLPFESRKEIRLLAPSHDGRLLLVLDVDGRALLVback to top mRNA from alignment at H-elongata_contig78501:1572..2499+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig78501.15520.1 ID=mRNA_H-elongata_contig78501.15520.1|Name=mRNA_H-elongata_contig78501.15520.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=928bp|location=Sequence derived from alignment at H-elongata_contig78501:1572..2499+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig78501:1572..2499+ >mRNA_H-elongata_contig78501.15520.1 ID=mRNA_H-elongata_contig78501.15520.1|Name=mRNA_H-elongata_contig78501.15520.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=906bp|location=Sequence derived from alignment at H-elongata_contig78501:1572..2499+ (Himanthalia elongata Himel1 dioecious)back to top |