mRNA_H-elongata_contig78314.15498.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig78314.15498.1 vs. uniprot
Match: A0A6H5KV36_9PHAE (Aminotran_1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV36_9PHAE) HSP 1 Score: 194 bits (492), Expect = 1.930e-56 Identity = 99/120 (82.50%), Postives = 111/120 (92.50%), Query Frame = 1
Query: 28 RYCYRVILNEALSFGVLGATGRGLTEMHGVDVTEIEIVTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASASLRILRSEPGLVSALRKNAEFLYKAVSGIPGLKV 387
+YCYR+ILNEALSFGVLGATGRG+TEM+GVDV+E+EIV LSMAHSLASVGGLCIGTTQVV HQRLSAAGYCYSA+APPF SAAASA+L +LR+EP LV+ALR NAEFL+ AV IPGLKV
Sbjct: 370 KYCYRLILNEALSFGVLGATGRGVTEMYGVDVSEVEIVALSMAHSLASVGGLCIGTTQVVAHQRLSAAGYCYSAAAPPFTSAAASAALGMLRAEPNLVAALRTNAEFLHGAVGAIPGLKV 489
BLAST of mRNA_H-elongata_contig78314.15498.1 vs. uniprot
Match: A0A7S2UXR4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXR4_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.710e-38 Identity = 64/120 (53.33%), Postives = 92/120 (76.67%), Query Frame = 1
Query: 28 RYCYRVILNEALSFGVLGATGRGLTEMHGVDVTEIEIVTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASASLRILRSEPGLVSALRKNAEFLYKAVSGIPGLKV 387
+Y YR++++E+ SFG LG TGRG+TE GVD++ +EI+ LSM +LASVGG C+G+ Q++DHQRLS GYC+SASAPPF+S AA L+++ P L+ +L + AE+L+KA+S GL+V
Sbjct: 14 KYFYRLVVDESFSFGTLGGTGRGVTEHCGVDISMVEIIMLSMESTLASVGGTCVGSEQIIDHQRLSGVGYCFSASAPPFLSVAACTGLQVMEENPNLLVSLNQKAEYLHKALSSCKGLQV 133
BLAST of mRNA_H-elongata_contig78314.15498.1 vs. uniprot
Match: A0A4D9CT10_9STRA (Aminotran_1_2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT10_9STRA) HSP 1 Score: 144 bits (363), Expect = 4.820e-38 Identity = 74/131 (56.49%), Postives = 98/131 (74.81%), Query Frame = 1
Query: 1 PLPFDFDFPR-YCYRVILNEALSFGVLGATGRGLTEMHGVDVTEIEIVTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASASLRILRSEPGLVSALRKNAEFLYKAVSGIPGLKVR 390
PLP R Y YR+ L++ SFG G GRGL E GV + +IE++++S++H+L SVGG+C+GT++VVDHQRLS AGYCYSASAPPF S+AA A+L +L EP LV+ LR+NA +L +A+ IPGLKVR
Sbjct: 295 PLPALIALKRQYRYRLYLDQTFSFGCFGTAGRGLAEHFGVPLADIEVMSVSISHALGSVGGMCVGTSEVVDHQRLSGAGYCYSASAPPFTSSAAMAALALLEKEPELVTKLRENAVWLARALGKIPGLKVR 425
BLAST of mRNA_H-elongata_contig78314.15498.1 vs. uniprot
Match: A0A835Z5A0_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5A0_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.360e-35 Identity = 68/121 (56.20%), Postives = 97/121 (80.17%), Query Frame = 1
Query: 28 RYCYRVILNEALSFGVLGATGRGLTEMHGVDVTEIEIVTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASASLRILRSE-PGLVSALRKNAEFLYKAVSGIPGLKV 387
+Y YR++++E LSFGVLGA+GRG+TE +G+ VT ++I+T+S+AH+LAS+GG+C+G VVDHQRLS AGYC+SA+APPF +AAA S+R+L SE P L+ LR NA+ L ++ + GL+V
Sbjct: 312 KYHYRLVVDEGLSFGVLGASGRGVTEHYGLPVTCVDIMTVSLAHALASIGGVCVGRDDVVDHQRLSGAGYCFSAAAPPFTAAAAGESIRLLESEGPQLLQQLRTNAKRLSSGLARVNGLQV 432
BLAST of mRNA_H-elongata_contig78314.15498.1 vs. uniprot
Match: A0A7S2D437_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D437_9STRA) HSP 1 Score: 132 bits (333), Expect = 7.280e-35 Identity = 66/112 (58.93%), Postives = 89/112 (79.46%), Query Frame = 1
Query: 28 RYCYRVILNEALSFGVLGATGRGLTEMHGVDVTEIEIVTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASASLRILRSEPGLVSALRKNAEFLYKAV 363
+Y YR+ L+E+LSFG LGATG+GLTE + V V ++++T+SMA+SLAS+GGLCIG+ +VVDHQRLS AGYC+SA+APPFVS A +L L+ EP LV L+KNA+ + K +
Sbjct: 124 KYGYRLFLDESLSFGTLGATGKGLTEHYQVPVEAVDMLTVSMAYSLASIGGLCIGSMEVVDHQRLSGAGYCFSAAAPPFVSRFAREALVRLQKEPALVEELQKNAQLVVKEI 235
BLAST of mRNA_H-elongata_contig78314.15498.1 vs. uniprot
Match: A0A643BS04_BALPH (Aminotran_1_2 domain-containing protein (Fragment) n=1 Tax=Balaenoptera physalus TaxID=9770 RepID=A0A643BS04_BALPH) HSP 1 Score: 127 bits (318), Expect = 4.970e-34 Identity = 60/120 (50.00%), Postives = 88/120 (73.33%), Query Frame = 1
Query: 28 RYCYRVILNEALSFGVLGATGRGLTEMHGVDVTEIEIVTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASASLRILRSEPGLVSALRKNAEFLYKAVSGIPGLKV 387
RY R+ L E+LSFGVLG GRG+TE G+D+ +I++++ +M +SLAS+GG C G + V+DHQRLS GYC+SAS PP ++AAA +L I+ PG+ + L++ + ++KA+ GI GLKV
Sbjct: 6 RYKARIFLEESLSFGVLGEHGRGVTEHFGIDIDDIDLISANMENSLASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIMEENPGIFAVLKEKCKRIHKALQGISGLKV 125
BLAST of mRNA_H-elongata_contig78314.15498.1 vs. uniprot
Match: A0A0S7FPR6_9TELE (SPTC1 n=3 Tax=Poeciliinae TaxID=586240 RepID=A0A0S7FPR6_9TELE) HSP 1 Score: 126 bits (317), Expect = 9.140e-34 Identity = 58/120 (48.33%), Postives = 89/120 (74.17%), Query Frame = 1
Query: 28 RYCYRVILNEALSFGVLGATGRGLTEMHGVDVTEIEIVTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASASLRILRSEPGLVSALRKNAEFLYKAVSGIPGLKV 387
RY R+ L E++SFGVLG G+G+TE GV++ +I++++ +M +++AS+GG C G + V+DHQRLS GYC+SAS PP ++AAA +L I+ +PG+ LR+ + +YKA+ GIPGLK+
Sbjct: 16 RYKVRIFLEESMSFGVLGEHGKGVTEHFGVNIDDIDLISANMENAVASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPMLAAAAIEALNIMEEDPGIFIVLREKCKHVYKALQGIPGLKL 135
BLAST of mRNA_H-elongata_contig78314.15498.1 vs. uniprot
Match: A0A3Q2QV45_FUNHE (Serine palmitoyltransferase 1-like n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2QV45_FUNHE) HSP 1 Score: 126 bits (316), Expect = 1.550e-33 Identity = 58/120 (48.33%), Postives = 89/120 (74.17%), Query Frame = 1
Query: 28 RYCYRVILNEALSFGVLGATGRGLTEMHGVDVTEIEIVTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASASLRILRSEPGLVSALRKNAEFLYKAVSGIPGLKV 387
RY R+ L E++SFGVLG G+G+TE GV++ +I++++ +M ++LAS+GG C G + V+DHQRLS GYC+SAS PP ++AAA +L I+ +P + + LR+ + +YKA+ GIPGLK+
Sbjct: 51 RYKVRLFLEESMSFGVLGEHGKGVTEHFGVNIDDIDLISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPMLAAAAIEALNIMEEDPSIFTVLREKCQHVYKALQGIPGLKL 170
BLAST of mRNA_H-elongata_contig78314.15498.1 vs. uniprot
Match: W9QWR7_9ROSA (Serine palmitoyltransferase 1 n=2 Tax=Morus notabilis TaxID=981085 RepID=W9QWR7_9ROSA) HSP 1 Score: 132 bits (331), Expect = 3.070e-33 Identity = 62/127 (48.82%), Postives = 94/127 (74.02%), Query Frame = 1
Query: 28 RYCYRVILNEALSFGVLGATGRGLTEMHGVDVTEIEIVTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASASLRILRSEPGLVSALRKNAEFLYKAVSGIPGLKVRRPPTPP 408
+Y +RV+L+E+ SFGVLG TGRGLTE GV V +I+I+T +M H+LA+ GG C G+ +V+DHQRLS++GY +SAS PP+++ AA ++ +L +P L++ L++N L+K +SG+PGL + P P
Sbjct: 273 KYRFRVLLDESNSFGVLGKTGRGLTEYFGVPVDKIDIITAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLATAAITAIDVLEEKPDLITKLKENVALLWKGLSGVPGLSIASNPESP 399
BLAST of mRNA_H-elongata_contig78314.15498.1 vs. uniprot
Match: A0A7J9CJH4_GOSGO (Aminotran_1_2 domain-containing protein (Fragment) n=1 Tax=Gossypium gossypioides TaxID=34282 RepID=A0A7J9CJH4_GOSGO) HSP 1 Score: 124 bits (312), Expect = 5.160e-33 Identity = 63/127 (49.61%), Postives = 90/127 (70.87%), Query Frame = 1
Query: 28 RYCYRVILNEALSFGVLGATGRGLTEMHGVDVTEIEIVTLSMAHSLASVGGLCIGTTQVVDHQRLSAAGYCYSASAPPFVSAAASASLRILRSEPGLVSALRKNAEFLYKAVSGIPGLKVRRPPTPP 408
+Y +RV+L+E SFGVLG TGRGLTE GV + +I+IVT +M H+LA+ GG C G+ +V+DHQRLS++GY +SAS PP++++AA ++ IL P L S L++N L+K +S I GL + P P
Sbjct: 17 KYRFRVLLDETNSFGVLGRTGRGLTEYCGVPIEKIDIVTSAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAIDILEQNPDLTSKLKENIAILWKGLSDIRGLSIASNPESP 143 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78314.15498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig78314.15498.1 >prot_H-elongata_contig78314.15498.1 ID=prot_H-elongata_contig78314.15498.1|Name=mRNA_H-elongata_contig78314.15498.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=138bp PLPFDFDFPRYCYRVILNEALSFGVLGATGRGLTEMHGVDVTEIEIVTLSback to top mRNA from alignment at H-elongata_contig78314:766..1726+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig78314.15498.1 ID=mRNA_H-elongata_contig78314.15498.1|Name=mRNA_H-elongata_contig78314.15498.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=961bp|location=Sequence derived from alignment at H-elongata_contig78314:766..1726+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig78314:766..1726+ >mRNA_H-elongata_contig78314.15498.1 ID=mRNA_H-elongata_contig78314.15498.1|Name=mRNA_H-elongata_contig78314.15498.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=828bp|location=Sequence derived from alignment at H-elongata_contig78314:766..1726+ (Himanthalia elongata Himel1 dioecious)back to top |