mRNA_H-elongata_contig78119.15482.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig78119.15482.1 vs. uniprot
Match: A0A6H5JNC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNC3_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 4.160e-21 Identity = 40/55 (72.73%), Postives = 49/55 (89.09%), Query Frame = 1
Query: 1 YNADYSKYEPFIIPHKTNPKMLSCTLMGMELNRIPKQIEAHVNGKRFRKKKAEFE 165
YNAD+SKYEPF++ HKTNPK+L CTL +ELNRIPK++EAHVNGKR+R +KAE E
Sbjct: 75 YNADFSKYEPFVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRKAEME 129
BLAST of mRNA_H-elongata_contig78119.15482.1 vs. uniprot
Match: D7G730_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G730_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 4.180e-20 Identity = 39/55 (70.91%), Postives = 48/55 (87.27%), Query Frame = 1
Query: 1 YNADYSKYEPFIIPHKTNPKMLSCTLMGMELNRIPKQIEAHVNGKRFRKKKAEFE 165
YNAD+SKYEPF++ HKTNPK+L CTL +ELNRIPK++EAHVNGKR+ +KAE E
Sbjct: 75 YNADFSKYEPFVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYGNRKAEME 129
BLAST of mRNA_H-elongata_contig78119.15482.1 vs. uniprot
Match: A0A7S3D5V3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D5V3_9EUKA) HSP 1 Score: 77.0 bits (188), Expect = 5.020e-16 Identity = 31/59 (52.54%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 1 YNADYSKYEPFIIPHKTNPKMLSCTLMGMELNRIPKQIEAHVNGKRFRKKKAEFEESLK 177
Y+ADYSKYEP I+PHK NPK L C + GM LN+IP ++E HVNG+++++ F++ +K
Sbjct: 82 YSADYSKYEPHIVPHKKNPKQLFCRVTGMTLNKIPSEVEKHVNGRKYKQMLTYFQDDVK 140
BLAST of mRNA_H-elongata_contig78119.15482.1 vs. uniprot
Match: A0A835YV33_9STRA (Surfeit locus protein 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV33_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.030e-12 Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 1 YNADYSKYEPFIIPHKTNPKMLSCTLMGMELNRIPKQIEAHVNGKRFRKKKAEFE 165
Y+ D+SKYEP I+ +K +PK+L C L LNRIP++IE HVNGKRF++ AE E
Sbjct: 87 YSYDFSKYEPHIVANKKDPKLLFCKLTMKPLNRIPEEIETHVNGKRFKRLVAEAE 141
BLAST of mRNA_H-elongata_contig78119.15482.1 vs. uniprot
Match: A0A484DXM0_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXM0_BRELC) HSP 1 Score: 67.4 bits (163), Expect = 4.520e-12 Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 1 YNADYSKYEPFIIPHKTNPKMLSCTLMGMELNRIPKQIEAHVNGKRFRKKK 153
YN DYS+YEP+I+PH+ PK L C + G LNRIP ++E HV GKR+++ K
Sbjct: 64 YNHDYSQYEPYIVPHRKLPKQLYCNVTGTVLNRIPFELEKHVQGKRYKRLK 114
BLAST of mRNA_H-elongata_contig78119.15482.1 vs. uniprot
Match: A0A024G4B4_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G4B4_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 5.870e-12 Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 1 YNADYSKYEPFIIPHKTNPKMLSCTLMGMELNRIPKQIEAHVNGKRFRK 147
YN D+SKY P IIPH+ PK L C + LNRIP+Q+E HVNGKR+++
Sbjct: 59 YNYDFSKYRPHIIPHRRKPKCLYCNVTQTTLNRIPEQVEKHVNGKRYQR 107
BLAST of mRNA_H-elongata_contig78119.15482.1 vs. uniprot
Match: F0X0C8_9STRA (Uncharacterized protein AlNc14C476G11866 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X0C8_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 8.610e-12 Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 1
Query: 1 YNADYSKYEPFIIPHKTNPKMLSCTLMGMELNRIPKQIEAHVNGKRFRK 147
YN D+SKY P+IIPH+ PK L C + LNRIP+Q+E HV+GKR+++
Sbjct: 65 YNYDFSKYRPYIIPHRRKPKCLYCNVTQTTLNRIPEQVEKHVSGKRYQR 113
BLAST of mRNA_H-elongata_contig78119.15482.1 vs. uniprot
Match: A0A7S2V5T7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5T7_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.450e-11 Identity = 29/58 (50.00%), Postives = 42/58 (72.41%), Query Frame = 1
Query: 1 YNADYSKYEPFIIPHKTNPKMLSCTLMGMELNRIPKQIEAHVNGKRFRKKKAEFEESL 174
Y DYS++EP+I+PHK + ++L CTL LN+IP Q++ HV GKRF + +AE E+ L
Sbjct: 70 YKQDYSEFEPYIVPHKFDSRLLFCTLTRRPLNKIPNQVKKHVEGKRFIRLRAEKEKIL 127
BLAST of mRNA_H-elongata_contig78119.15482.1 vs. uniprot
Match: A0A5J4YP26_PORPP (Surfeit locus protein 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YP26_PORPP) HSP 1 Score: 66.2 bits (160), Expect = 1.630e-11 Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 10 DYSKYEPFIIPHKTNPKMLSCTLMGMELNRIPKQIEAHVNGKRFRKKKAEFEESLK 177
D+S+YEP ++PH+TN K L C M LNR+P+QIE HVNG+RF+ A++E K
Sbjct: 86 DFSQYEPHVVPHRTNAKKLFCLFTRMVLNRVPEQIERHVNGRRFKFHLAQWESQQK 141
BLAST of mRNA_H-elongata_contig78119.15482.1 vs. uniprot
Match: D0NMC6_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NMC6_PHYIT) HSP 1 Score: 64.7 bits (156), Expect = 2.900e-11 Identity = 26/51 (50.98%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 1 YNADYSKYEPFIIPHKTNPKMLSCTLMGMELNRIPKQIEAHVNGKRFRKKK 153
Y DYS+YEP+I+PH+ PK L C + G LNRIP ++E H+ GKR+++ K
Sbjct: 62 YCHDYSQYEPYIVPHRRLPKSLYCNVTGTILNRIPSEVEKHIQGKRYKRMK 112 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78119.15482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig78119.15482.1 >prot_H-elongata_contig78119.15482.1 ID=prot_H-elongata_contig78119.15482.1|Name=mRNA_H-elongata_contig78119.15482.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp YNADYSKYEPFIIPHKTNPKMLSCTLMGMELNRIPKQIEAHVNGKRFRKKback to top mRNA from alignment at H-elongata_contig78119:2..178- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig78119.15482.1 ID=mRNA_H-elongata_contig78119.15482.1|Name=mRNA_H-elongata_contig78119.15482.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=177bp|location=Sequence derived from alignment at H-elongata_contig78119:2..178- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig78119:2..178- >mRNA_H-elongata_contig78119.15482.1 ID=mRNA_H-elongata_contig78119.15482.1|Name=mRNA_H-elongata_contig78119.15482.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=354bp|location=Sequence derived from alignment at H-elongata_contig78119:2..178- (Himanthalia elongata Himel1 dioecious)back to top |