mRNA_H-elongata_contig78094.15479.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig78094.15479.1 vs. uniprot
Match: T1G7Q5_HELRO (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G7Q5_HELRO) HSP 1 Score: 68.6 bits (166), Expect = 1.010e-13 Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 1
Query: 4 KWRAANEHKYPLIGSVARSVLAVPATSAPSERLFSQSDMIVYDKRSKLAPERLEQLMFL 180
KW A N ++P I VAR LA+PATS PSE++FS S I+ ++R++L PE +EQL+FL
Sbjct: 22 KWWADNASRFPTIAKVARKYLAIPATSVPSEQIFSMSGQIMNERRNRLKPEHVEQLVFL 80
BLAST of mRNA_H-elongata_contig78094.15479.1 vs. uniprot
Match: T1EL11_HELRO (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EL11_HELRO) HSP 1 Score: 65.1 bits (157), Expect = 1.120e-12 Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 1
Query: 19 NEHKYPLIGSVARSVLAVPATSAPSERLFSQSDMIVYDKRSKLAPERLEQLMFL 180
N ++P I VAR LA+PATSAPSE++FS S I+ ++R++L PE +EQL+FL
Sbjct: 1 NASRFPTIAKVARKYLAIPATSAPSEQIFSMSGQIINERRNRLKPEHVEQLVFL 54
BLAST of mRNA_H-elongata_contig78094.15479.1 vs. uniprot
Match: U9TMC6_RHIID (Uncharacterized protein (Fragment) n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=U9TMC6_RHIID) HSP 1 Score: 64.7 bits (156), Expect = 1.880e-12 Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 7 WRAANEHKYPLIGSVARSVLAVPATSAPSERLFSQSDMIVYDKRSKLAPERLEQLMFLRGAW 192
W N+ ++P++ +AR LA+PATS PSERLFS++ ++ KR++LAP LE L+F + W
Sbjct: 3 WWRINKTRFPVLSKLARKYLAIPATSTPSERLFSEAGNVMTIKRTQLAPNMLENLVFCKKNW 64
BLAST of mRNA_H-elongata_contig78094.15479.1 vs. uniprot
Match: A0A1X7SKD3_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SKD3_AMPQE) HSP 1 Score: 66.2 bits (160), Expect = 2.840e-12 Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 1 VKWRAANEHKYPLIGSVARSVLAVPATSAPSERLFSQSDMIVYDKRSKLAPERLEQLMFL 180
++W ANE ++P I +AR L VPATS PSER+FS + +++ +KRS L PE + L+FL
Sbjct: 76 LEWWKANESRFPTIARIARRYLCVPATSVPSERVFSAAGLVINNKRSSLTPENADMLIFL 135
BLAST of mRNA_H-elongata_contig78094.15479.1 vs. uniprot
Match: A0A1A7XHY4_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Iconisemion striatum TaxID=60296 RepID=A0A1A7XHY4_9TELE) HSP 1 Score: 63.2 bits (152), Expect = 1.220e-11 Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 7 WRAANEHKYPLIGSVARSVLAVPATSAPSERLFSQSDMIVYDKRSKLAPERLEQLMFL 180
W NE ++P +G +A S+L +PATS PSE+LFS + IV KR+ L+PE ++ L FL
Sbjct: 18 WWKVNEQRFPTLGKLANSLLCIPATSTPSEQLFSAAGNIVSKKRASLSPENVDMLTFL 75
BLAST of mRNA_H-elongata_contig78094.15479.1 vs. uniprot
Match: A0A1A7ZCN3_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A7ZCN3_NOTFU) HSP 1 Score: 63.5 bits (153), Expect = 1.280e-11 Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 1 VKWRAANEHKYPLIGSVARSVLAVPATSAPSERLFSQSDMIVYDKRSKLAPERLEQLMF 177
++W +NE ++P + S+A+S L VPATS PSERLFS + IV KR+ L+PE ++ L F
Sbjct: 34 LQWWKSNEARFPSLASLAKSYLCVPATSTPSERLFSSAGNIVSKKRTSLSPEHIDMLTF 92
BLAST of mRNA_H-elongata_contig78094.15479.1 vs. uniprot
Match: A0A094I505_9PEZI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Pseudogymnoascus sp. VKM F-4519 (FW-2642) TaxID=1420914 RepID=A0A094I505_9PEZI) HSP 1 Score: 65.9 bits (159), Expect = 1.430e-11 Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 1
Query: 1 VKWRAANEHKYPLIGSVARSVLAVPATSAPSERLFSQSDMIVYDKRSKLAPERLEQLMFLR 183
+K+ AA +++YP+I ++AR LA+PATSAPSER+FS I+ KR++L+PE L L+ LR
Sbjct: 115 LKYWAAKQYQYPIIAAIARDHLAIPATSAPSERVFSNGANILTKKRNRLSPETLRYLLCLR 175
BLAST of mRNA_H-elongata_contig78094.15479.1 vs. uniprot
Match: U9U296_RHIID (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=U9U296_RHIID) HSP 1 Score: 65.1 bits (157), Expect = 2.140e-11 Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 7 WRAANEHKYPLIGSVARSVLAVPATSAPSERLFSQSDMIVYDKRSKLAPERLEQLMFLRGAW 192
W N+ ++P++ +AR LA+PATS PSERLFS++ ++ KR++LAP LE L+F + W
Sbjct: 119 WWKTNKTRFPVLSKLARKYLAIPATSTPSERLFSEAGNVMTIKRTQLAPNMLENLVFCKKNW 180
BLAST of mRNA_H-elongata_contig78094.15479.1 vs. uniprot
Match: A0A1A8M216_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8M216_9TELE) HSP 1 Score: 63.9 bits (154), Expect = 2.670e-11 Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 7 WRAANEHKYPLIGSVARSVLAVPATSAPSERLFSQSDMIVYDKRSKLAPERLEQLMFL 180
W ANE ++P + +A S+L +PATS PSERLFS + IV KR+ L+PE ++ L FL
Sbjct: 82 WWKANEQRFPTLAKLANSLLCIPATSTPSERLFSAAGNIVSKKRASLSPEHVDMLTFL 139
BLAST of mRNA_H-elongata_contig78094.15479.1 vs. uniprot
Match: J9LZ29_ACYPI (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9LZ29_ACYPI) HSP 1 Score: 66.6 bits (161), Expect = 2.680e-11 Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 7 WRAANEHKYPLIGSVARSVLAVPATSAPSERLFSQSDMIVYDKRSKLAPERLEQLMFLRG 186
W ANE+K+P+I +A+ L++ ATS PSERLFSQ+ +V KR++L P R+ L+FL
Sbjct: 546 WWKANEYKFPVIAKLAKKYLSIVATSVPSERLFSQAGQVVSQKRARLMPSRVNDLLFLNS 605 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78094.15479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig78094.15479.1 >prot_H-elongata_contig78094.15479.1 ID=prot_H-elongata_contig78094.15479.1|Name=mRNA_H-elongata_contig78094.15479.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp VKWRAANEHKYPLIGSVARSVLAVPATSAPSERLFSQSDMIVYDKRSKLAback to top mRNA from alignment at H-elongata_contig78094:1888..2079+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig78094.15479.1 ID=mRNA_H-elongata_contig78094.15479.1|Name=mRNA_H-elongata_contig78094.15479.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=192bp|location=Sequence derived from alignment at H-elongata_contig78094:1888..2079+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig78094:1888..2079+ >mRNA_H-elongata_contig78094.15479.1 ID=mRNA_H-elongata_contig78094.15479.1|Name=mRNA_H-elongata_contig78094.15479.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=384bp|location=Sequence derived from alignment at H-elongata_contig78094:1888..2079+ (Himanthalia elongata Himel1 dioecious)back to top |