mRNA_H-elongata_contig77769.15453.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: D7FSK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK4_ECTSI) HSP 1 Score: 324 bits (830), Expect = 8.030e-107 Identity = 164/220 (74.55%), Postives = 189/220 (85.91%), Query Frame = 1
Query: 1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSNAHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
+GVVAA+ KDVP GY LSFDAAI S+VPLGGGLSSSAALEVS+ATLLEEITGV VGGV+KALRCQ SDH FMG+ CGIMDQFVS+LA G LLVDCR+NA ETVPLDD G+VFVV ++G++H NA G Y ERV+QC+ AV+A+ RHP V+QLRDAS AWV E++ EV+EKVFKRARHVVSEDRRTLCCAMALRRKDY + GGCM+ESH SL+ +YEV
Sbjct: 110 KGVVAAFRKDVPEGYELSFDAAIASNVPLGGGLSSSAALEVSMATLLEEITGVRVGGVDKALRCQWSDHNFMGIPCGIMDQFVSALAVAGTTLLVDCRTNAFETVPLDDSGVVFVVTNTGIRHRNASGAYGERVQQCKDAVEAIKK-RHPEVEQLRDASLAWVLEVKDEVDEKVFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHTSLRDDYEV 328
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A6H5K3S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S4_9PHAE) HSP 1 Score: 300 bits (768), Expect = 2.000e-98 Identity = 161/243 (66.26%), Postives = 183/243 (75.31%), Query Frame = 1
Query: 13 AAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGGVEKALRCQS-SDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSNAHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLG--------------------------RHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
AA+ KDVP GY LSFDAAI S+VPLGGGLSSSAALEVS+ATLLEEITGV VGGV+KALR SDH FMG+ CGIMDQFVS+LA G LLVDCR+NA ETVPLDD G+VFVV ++G++H NA G Y ERV+QC AV+A + RHP V+QLRDAS AWV E+Q EV+EKVFKRARHVVSEDRRTLCCAMALRRKDY + GGCM+ESHASL+ +YEV
Sbjct: 48 AAFRKDVPEGYELSFDAAIASNVPLGGGLSSSAALEVSMATLLEEITGVRVGGVDKALRSHKWSDHNFMGIPCGIMDQFVSALAVAGTTLLVDCRTNAFETVPLDDSGVVFVVTNTGIRHRNASGAYGERVQQCRDAVEAPTKAWERKSFVPHGDAVYAHAGMDAVQIKKRHPEVEQLRDASLAWVLEVQDEVDEKVFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEV 290
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: I2CP88_NANGC (Galactokinase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP88_NANGC) HSP 1 Score: 217 bits (553), Expect = 3.520e-65 Identity = 114/220 (51.82%), Postives = 154/220 (70.00%), Query Frame = 1
Query: 1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSNAHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
+GVVA Y+KDVP G L F+AA+ S VPLG GLSSSA+LEV++AT LE+I G G + KALRCQS++HKF V CGIMDQFVS+LA G LL+DCRS+ VPL D +V +V +S +KH+ Y RV QC+ AV+ + ++P VK LRD + ++ +++ ++E V++RARHV+SE+ RT ALRR+DY G M+ESHASL+ +YEV
Sbjct: 111 KGVVAEYVKDVPAGKYLVFEAAVASSVPLGSGLSSSASLEVAMATFLEQILGTTPGLITKALRCQSAEHKFAHVPCGIMDQFVSALAKTGKVLLLDCRSHTETLVPLADPDLVILVTNSKVKHNLGGSEYPHRVAQCKAAVEGLQK-KYPEVKSLRDVTLEQLDSVKTSLSELVYRRARHVISENARTQAAVAALRRRDYAAVGQAMTESHASLRDDYEV 329
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A7S0H8A0_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0H8A0_9EUKA) HSP 1 Score: 191 bits (486), Expect = 2.220e-55 Identity = 107/221 (48.42%), Postives = 143/221 (64.71%), Query Frame = 1
Query: 1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSN-AHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
+GVVA YL +P G +F+AA+ S VPLGGGLSSSA+LEV+ ATLLE + G+ V EKALRCQ +H F CGIMDQ +S+ + ALL+DCR A E VPLDD +V +VA+S +KH + Y +RV+QC+ A A+ H V LRDA+PA ++ ++ +V KRA H +SED+RTL AL+ +DY G M +SH SL+ +YEV
Sbjct: 105 RGVVAQYLPSLPGGSC-AFEAAVLSTVPLGGGLSSSASLEVATATLLESLYGLEVDPKEKALRCQKCEHTFCDTPCGIMDQMISACGRQSAALLIDCRPPFASEHVPLDDPDVVLLVANSNVKHKLSGSEYPDRVRQCKEACAAMRAKGHTQVHFLRDATPAMLQSCVGSLSAEVIKRASHGISEDQRTLEAKAALKARDYVRVGKLMHQSHVSLRDDYEV 324
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A6S9KLL0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KLL0_HETAK) HSP 1 Score: 189 bits (480), Expect = 3.140e-55 Identity = 119/237 (50.21%), Postives = 145/237 (61.18%), Query Frame = 1
Query: 1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGG-------VEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSNAHETV----PLDDDGI-VFVVADSGMKHSNADGW----YTERVKQCEVAVQAVSLGRH-PAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
+GVVA Y+ D+P GY + FD I SDVPLG GLSSSAALEV+ AT LEE+ +G V KALRCQS +HK++ CGIMDQF+S+L G LLVDCRS V P D G V VV +S +KH A G Y +RV+QC AV A+ + P + LRDA+ VE I+ V E V++RARHVVSED R A ALR DY AG M +SHASL+ +YEV
Sbjct: 105 RGVVAEYVPDLPAGYAMQFDLFIVSDVPLGSGLSSSAALEVATATWLEELLARDLGRAYARPSKVAKALRCQSCEHKYLNTPCGIMDQFISALGEAGKPLLVDCRSREGTPVAMAPPKDGGGQPVVVVCNSKVKHELAAGGGESPYAQRVRQCREAVAAIQQHCNLPKITHLRDATLENVEVIKGRVPEAVYRRARHVVSEDLRCQSAAAALRDGDYRAAGAAMFKSHASLRDDYEV 341
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A7S2E1C8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E1C8_9STRA) HSP 1 Score: 187 bits (476), Expect = 8.510e-54 Identity = 104/226 (46.02%), Postives = 140/226 (61.95%), Query Frame = 1
Query: 1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSNAHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLG-RHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEVRDVTL 675
+GVV Y D+P G SF AA SDVPLG GLSSSAALEVS ATLLE I G EKALRCQ ++H+F + CGIMDQF+S+ L++DCRSN T+P + V +V +S +KH+ +D Y RV QC+ A +A++ V LRDA+ + E++ +++ FKRARHV+SE+RR L AL + D + G M +SH SL+ ++EV V L
Sbjct: 143 KGVVKMYSADLPVGMKFSFSAAFASDVPLGAGLSSSAALEVSTATLLETILGTAPSPEEKALRCQGAEHEFCDMPCGIMDQFISARGVAQSLLMIDCRSNVGTTIPFTAEDYVVLVTNSKVKHALSDSEYPLRVAQCQTATKALAAKFGSETVTSLRDATLGMLSEVEGDLDAVSFKRARHVISENRRVLAAVAALEQSDLSAVGQLMVQSHESLRDDFEVSAVEL 368
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A7S0JH07_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JH07_9EUKA) HSP 1 Score: 183 bits (465), Expect = 3.540e-53 Identity = 104/221 (47.06%), Postives = 144/221 (65.16%), Query Frame = 1
Query: 1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSN-AHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
+GVV YL D+P G F+AA+ + VPLGGGLSSSA+LEV+ AT+LE + + V + KALRCQ +H F CGIMDQF+S+ G ALL+DCR E VPLDD+G+ V+A+S +KHS + Y +RV+QC+ A A+ HP V+ LRDA+ + +++ ++ V +RA H +SED+RTL AL+ +DY G M ESH SL+ +YEV
Sbjct: 96 RGVVFQYLPDLPGGCA-GFEAAVVTTVPLGGGLSSSASLEVATATMLEALYELRVEPLVKALRCQKCEHDFCATPCGIMDQFISACGKAGHALLIDCRKPYPTEHVPLDDEGLQIVIANSNVKHSLSGSEYPDRVRQCKEACAAMRSSGHPGVRFLRDATLEQLASVKA-LDAVVARRATHGISEDQRTLQAREALKARDYARVGQLMLESHRSLRDDYEV 314
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A7S3GMT9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GMT9_9STRA) HSP 1 Score: 187 bits (474), Expect = 3.570e-53 Identity = 100/223 (44.84%), Postives = 150/223 (67.26%), Query Frame = 1
Query: 1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVH-VGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSNAHETVPLD--DDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
+G + YL ++PPG ++F+AAI DVP+G GLSSSA+LEV+V+T LE + + V GV+KALRCQ ++H F G+ CGIMDQ++S++ EG LL+DCR+ + VP + + +V +S +KH Y +RV+QC+ AV A+ + P VK LRDA+ +E ++++++ V++RARH + ED+RTL AL+ KDY G M+ESH SL+ +YEV
Sbjct: 97 KGAIFQYLGELPPG--IAFNAAIVGDVPIGSGLSSSASLEVAVSTFLEGLCSITTVSGVQKALRCQKAEHTFAGMPCGIMDQYISAMGQEGNLLLIDCRTTEYTLVPYGAGPEVPIILVTNSNVKHQLTGSEYPDRVRQCKEAV-ALLQKKFPQVKALRDATMEMLEATRTQMSDLVYRRARHCIGEDQRTLGAVQALKNKDYATVGRLMTESHRSLQDDYEV 316
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A7S4EVF5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EVF5_CHRCT) HSP 1 Score: 186 bits (471), Expect = 4.100e-53 Identity = 107/228 (46.93%), Postives = 147/228 (64.47%), Query Frame = 1
Query: 1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSN-AHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHPAVKQLRDASPAWVEEIQSE--VNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEVRDVTL 675
+GVV YLKD+P G V F+AA+ S+VPLGGGLSSSA++EV++ T++E + + V EKALRCQ +H F CGIMDQF+S+ G ALL+DCR E VP+DD + V+A+S +KH + Y +RV+QC+ A A+ H V+ LRDA+ +E++ S ++ V RARHV+SED+RTL AL+ +DY G M ESH SL+ +YEV V L
Sbjct: 96 RGVVYQYLKDLPGG-VCGFEAAVLSNVPLGGGLSSSASVEVAIGTMIEGLYDLTVTPTEKALRCQKCEHDFCDTPCGIMDQFISACGKSGHALLIDCRKPYPTEHVPIDDPDLALVIANSNVKHKLSGSEYPDRVRQCKEACAAMRSAGHADVRFLRDAT---LEQLASAKGIDPVVAARARHVISEDQRTLQAKEALKARDYRRVGALMVESHRSLRDDYEVSTVEL 319
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A7S0SZX5_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZX5_9STRA) HSP 1 Score: 183 bits (464), Expect = 2.360e-52 Identity = 103/227 (45.37%), Postives = 146/227 (64.32%), Query Frame = 1
Query: 1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVH-VGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSNAHET----VPLDDDGI--VFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
+G + YL D+P + SFDA I S+VPLG GLSSSA+LEV+ AT LE++ ++ V VEKALRCQ ++H F CGIMDQF+S+L + LL+DCRS + T + L+D+ + +V +S +KH A Y +RVKQC AV+ + ++P VK LRDA+ +E ++ ++E FKRARH + ED+RTL A+ DY AG M++SH SL+ +YEV
Sbjct: 70 KGTIYQYLNDLPANF--SFDAVICSNVPLGSGLSSSASLEVATATFLEKLCSINNVSKVEKALRCQQAEHTFADTPCGIMDQFISALGKDDSLLLIDCRSREYSTCELGINLEDNKTKPIVLVTNSNIKHKLAGSEYPDRVKQCNEAVKVLQ-SQYPEVKALRDATVDMLEAVKDNLSEVCFKRARHCIGEDKRTLATVKAISIGDYITAGKMMTQSHESLRDDYEV 293 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77769.15453.1 >prot_H-elongata_contig77769.15453.1 ID=prot_H-elongata_contig77769.15453.1|Name=mRNA_H-elongata_contig77769.15453.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=229bp QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEIback to top mRNA from alignment at H-elongata_contig77769:1011..2386- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77769.15453.1 ID=mRNA_H-elongata_contig77769.15453.1|Name=mRNA_H-elongata_contig77769.15453.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1376bp|location=Sequence derived from alignment at H-elongata_contig77769:1011..2386- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77769:1011..2386- >mRNA_H-elongata_contig77769.15453.1 ID=mRNA_H-elongata_contig77769.15453.1|Name=mRNA_H-elongata_contig77769.15453.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1374bp|location=Sequence derived from alignment at H-elongata_contig77769:1011..2386- (Himanthalia elongata Himel1 dioecious)back to top |