mRNA_H-elongata_contig77689.15447.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A6H5KD48_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD48_9PHAE) HSP 1 Score: 323 bits (827), Expect = 8.730e-109 Identity = 177/201 (88.06%), Postives = 188/201 (93.53%), Query Frame = 1
Query: 1 QACTDLDTLTQQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQVSTFS 603
+ACTDLDTLTQQATLTS+AT EAD+K +INT I TNNRVAHAKGLLQAMREETEAMK + RAKPSEVRVRENLQNTLTRKFVD+AKDYQNRQN +KT+VKKKAERQILAVKP+ATEEELT VFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTY DVRRLEASI+ELHKMFMDLALLVDRQGEMLDQIEYQV + S
Sbjct: 64 KACTDLDTLTQQATLTSSATVEADAKSQINTTIANTNNRVAHAKGLLQAMREETEAMKKDPSRAKPSEVRVRENLQNTLTRKFVDLAKDYQNRQNKYKTSVKKKAERQILAVKPSATEEELTTVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYHDVRRLEASILELHKMFMDLALLVDRQGEMLDQIEYQVKSAS 264
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A836CD59_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD59_9STRA) HSP 1 Score: 204 bits (520), Expect = 2.470e-62 Identity = 115/197 (58.38%), Postives = 150/197 (76.14%), Query Frame = 1
Query: 4 ACTDLDTLTQQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQ-GDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQV 591
AC LD+LT+ A +K +I V+ +TN V+HAK LL +R ET A+K + +R+ + +RVR NL+ T TRKFVDVAK+YQN+QN +K+ VK KAER + AVKPT TE+E+ AVF+Q+DGV+RV+EAA++QQ GDPVEV +VL EV+D Y DVRRLEASI+ELH+MFMDLALLV++QGE LD IE+QV
Sbjct: 57 ACKQLDSLTEAAIFAPMDKGGETAKDKITEVLAKTNKHVSHAKTLLHDLRTETAALKRDPKRSTNANIRVRANLETTFTRKFVDVAKEYQNKQNRYKSQVKGKAERAVKAVKPTVTEDEMAAVFQQDDGVKRVLEAAVMQQSGDPVEVANVLAEVQDQYEDVRRLEASILELHRMFMDLALLVEQQGETLDVIEFQV 253
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A836CCH9_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCH9_9STRA) HSP 1 Score: 170 bits (430), Expect = 7.270e-49 Identity = 101/196 (51.53%), Postives = 137/196 (69.90%), Query Frame = 1
Query: 4 ACTDLDTLTQQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQV 591
AC +LD L A A +K+ ++ ++T+TN +H+K LL A+R ET +K + + + +RVR NL+ + KFVD AK+Y+N+Q+ ++ VK+KAER I AVKP TEEE+TAVF EDGV RV++AA+LQ ++ VL EV+DTY+DVRRLEASIMELH+MFMDLALLV++QGE LD IE QV
Sbjct: 51 ACKELDKLASAALFAPLEQDGASAKEAMSALLTKTNRITSHSKTLLNAIRAETTELKRDRKGITDANLRVRVNLERSTLTKFVDAAKEYENKQSRYRLQVKRKAERVIRAVKPLVTEEEMTAVFNHEDGVARVLQAAVLQSRTGID--DVLTEVQDTYKDVRRLEASIMELHRMFMDLALLVEQQGETLDNIELQV 244
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A4D9D821_9STRA (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D821_9STRA) HSP 1 Score: 156 bits (395), Expect = 2.040e-43 Identity = 94/187 (50.27%), Postives = 127/187 (67.91%), Query Frame = 1
Query: 31 QQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQV 591
Q+A L + EA + +N VI TN + A AK +L M++ET ++ +S R PS++R+R+NL NTLTRKFVDV KDYQN Q +K +K K +RQ+ VKP A+ EE+ AVF+ G +V+ AIL+ G + +V + V D Y+DV LEASI ELH+MF+D ALLV++QGEMLDQIEYQV
Sbjct: 80 QEAFLATTGPREAKLSQELNAVIQETNPKAARAKKMLSKMKDETTKLRQDS-RCTPSQLRIRDNLTNTLTRKFVDVMKDYQNAQTKYKAFIKDKVQRQVQIVKPDASTEEIEAVFKSGGGGDQVITQAILK-GANESIRNVYQNVADKYQDVLTLEASIAELHQMFLDFALLVEQQGEMLDQIEYQV 264
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A7S2FD15_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FD15_9STRA) HSP 1 Score: 144 bits (362), Expect = 9.230e-39 Identity = 86/200 (43.00%), Postives = 126/200 (63.00%), Query Frame = 1
Query: 4 ACTDLDTLTQQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQVSTFS 603
AC ++ + QQ L + T+E + ++++ +I +TN K +L M+EET+ + + +AK +E R+RENL NTLTRKF++V K+YQ RQ +K VKKK RQ+ VK AT EE+ V + G + ++AIL+ + EV + D Y+DV RLE S+ ELH+MF+D ALL ++QGE+LDQIEYQV S
Sbjct: 52 ACKEIQNINQQMLLAT--TSETEISQKLSPIIDKTNKIAQRCKTILNTMKEETDTLARENDKAKANEQRIRENLVNTLTRKFMEVVKEYQKRQQDYKDDVKKKVTRQVKIVKEDATPEEIDQVMKSAGGTGAMFKSAILKSANN-EVVEAYSQAADQYQDVLRLEESMQELHQMFVDFALLTEQQGELLDQIEYQVHAAS 248
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A812WGN8_SYMMI (Stx3 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WGN8_SYMMI) HSP 1 Score: 135 bits (341), Expect = 7.310e-37 Identity = 81/167 (48.50%), Postives = 111/167 (66.47%), Query Frame = 1
Query: 94 VITRTNNRVAHAKGLLQAMREETEAMKTN--SQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQ 588
+IT TN R A AK LLQ +RE+ + +K++ + + + +E+R+RENL NTLTRKFVDV K YQN Q FK +KKK +RQI VKP AT EE+ V G + + IL+ V + V+D Y+DV RLEAS+ +LH+MF+D A L ++QGE+LDQIE+Q
Sbjct: 20 IITDTNKRAALAKQLLQRLREDCDGIKSSPSTSQKEANELRIRENLINTLTRKFVDVMKSYQNAQQKFKLDIKKKMKRQIQIVKPDATPEEIDEVIISGGGAGEIFKNVILKGTPSDSVRNATRNVQDKYQDVMRLEASVAQLHEMFVDFAQLTEQQGELLDQIEFQ 186
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: K0SR65_THAOC (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SR65_THAOC) HSP 1 Score: 140 bits (353), Expect = 1.020e-36 Identity = 84/192 (43.75%), Postives = 120/192 (62.50%), Query Frame = 1
Query: 16 LDTLTQQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQV 591
++ L +A L ++ T EA + I T++ TN R K LL ++EE +K ++AKP+++RVRENL NTL RKF+D K YQN Q +KT VKKK RQ+ +KP AT++E+ + E G + + + IL G ++ V Y+D+ LEAS+ ELH+MF+D ALL D+QGE+LDQIEYQV
Sbjct: 100 INALKDKAVLATSETEEAQISEMIRTLVEGTNGRAKTCKNLLGLLKEENSNLK-KEEKAKPTDLRVRENLVNTLLRKFIDEMKRYQNAQQQYKTDVKKKVTRQVQIIKPDATDQEVDDIMRSEGGREALYQQQILSGGVNDQIKTQYRAVAGKYQDILTLEASVAELHQMFLDFALLTDQQGELLDQIEYQV 290
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A7S2LQF4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LQF4_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.780e-36 Identity = 77/167 (46.11%), Postives = 105/167 (62.87%), Query Frame = 1
Query: 97 ITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQVST 597
+T TN R K +L ++EE +K AKP+++RVRENL NTL RKF+D K YQN Q +KT VKKK RQ+ V+P AT++E+ + E G + + + IL G ++ V Y+DV LEAS+ ELH+MF+D ALL ++QGE+LDQIEYQV T
Sbjct: 1 VTDTNGRAKKCKNMLGLLKEENANLKKTEGAAKPTDLRVRENLVNTLLRKFIDEMKRYQNSQQQYKTDVKKKVTRQVQMVRPNATDQEVDEIMRSEGGREALYQQQILSGGVNDQIKTQYRAVAGKYQDVLTLEASVAELHQMFLDFALLTEQQGELLDQIEYQVKT 167
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A7S2RH32_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RH32_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.540e-35 Identity = 78/176 (44.32%), Postives = 108/176 (61.36%), Query Frame = 1
Query: 64 EADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQGDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQV 591
EAD + +I TN R K +L ++EE E +K + KPS++R+R+NL NTLTRKFVD K YQN Q +KT ++KKA RQI +KP ATEEE+ + + + G + + + IL G + V Y+DV LE S+ ELH++F D ALL D+QGE+LDQIE+ V
Sbjct: 11 EADLSNEMRPLIDETNKRAKRTKNILSLLKEENEKLKKKN--VKPSDLRIRQNLCNTLTRKFVDEIKQYQNAQQKYKTDLRKKAARQIKVIKPDATEEEVDVIMKTDGGREALYKETILSGGVNDNIKTAYANVAGKYQDVLALEQSVAELHQLFQDFALLTDQQGELLDQIEFNV 184
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Match: A0A7S2K4X5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K4X5_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.130e-35 Identity = 83/192 (43.23%), Postives = 120/192 (62.50%), Query Frame = 1
Query: 25 LTQQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMREETEAMKTNSQRAKPSEVRVRENLQNTLTRKFVDVAKDYQNRQNTFKTAVKKKAERQILAVKPTATEEELTAVFEQEDGVQRVMEAAILQQ-GDPVEVTHVLEEVKDTYRDVRRLEASIMELHKMFMDLALLVDRQGEMLDQIEYQVST 597
+ ++A L + E D R+ ++ TN + HAK LL+ ++++ E K K S++R+RENL NTLTRKFVD K+YQN Q +K+ +KKK +RQ+ VKP AT EE+ AV + E G + + IL DP++ + V Y+DV LEAS+ ELH+MF D ALL ++QGE+L+QIE+QV T
Sbjct: 67 INEEAVLAISTDKERDLSNRLRPLVDSTNKKAKHAKALLELIKKQNEQEKGKGN-IKNSDMRIRENLNNTLTRKFVDEMKEYQNAQQKYKSDIKKKVKRQVQIVKPDATNEEIDAVMKSEGGRDALYKDKILTGVADPIKNAYA--NVAGKYQDVLALEASVTELHQMFQDFALLTEQQGELLNQIEFQVET 255 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77689.15447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77689.15447.1 >prot_H-elongata_contig77689.15447.1 ID=prot_H-elongata_contig77689.15447.1|Name=mRNA_H-elongata_contig77689.15447.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=201bp QACTDLDTLTQQATLTSNATAEADSKKRINTVITRTNNRVAHAKGLLQAMback to top mRNA from alignment at H-elongata_contig77689:300..2595- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77689.15447.1 ID=mRNA_H-elongata_contig77689.15447.1|Name=mRNA_H-elongata_contig77689.15447.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2296bp|location=Sequence derived from alignment at H-elongata_contig77689:300..2595- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77689:300..2595- >mRNA_H-elongata_contig77689.15447.1 ID=mRNA_H-elongata_contig77689.15447.1|Name=mRNA_H-elongata_contig77689.15447.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1206bp|location=Sequence derived from alignment at H-elongata_contig77689:300..2595- (Himanthalia elongata Himel1 dioecious)back to top |